DDB1- and CUL4-associated factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G35140 AT4G35140 AT4G38480 AT4G38480 |
| fragaria_vesca | FvH4_2g15750 FvH4_2g15750 FvH4_2g15750 |
| malus_domestica | MD05G1126500.v1.1 |
| prunus_persica | Prupe.8G169900_v2.0.a1 Prupe.8G169900_v2.0.a1 Prupe.8G169900_v2.0.a1 |
| pyrus_communis | pycom05g12230 |
| rosa_chinensis | RchiOBHm_Chr6g0279061 RchiOBHm_Chr6g0279071 |
| rosa_laevigata | RLG00000013169 |
| rosa_multiflora | Rmu_co8384295.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00189170 |
| rosa_rugosa | Rorug06G0121800 Rorug06G0121900 Rorug06G0122000 |
| rosa_samantha | Rh6AG230800 Rh6BG235600 Rh6CG237700 Rh6DG229300 |
| rosa_wichuraiana | Rw0G017050 Rw0G021130 Rw6G020200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 34, 246 |
| AcsI | RAATTY | 1 cut(s) | 404 |
| AfaI | GTAC | 1 cut(s) | 56 |
| AgsI | TTSAA | 1 cut(s) | 277 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 287, 319 |
| AluBI | AGCT | 2 cut(s) | 63, 323 |
| AluI | AGCT | 2 cut(s) | 63, 323 |
| Alw26I | GTCTC | 1 cut(s) | 206 |
| ApeKI | GCWGC | 1 cut(s) | 309 |
| ApoI | RAATTY | 1 cut(s) | 404 |
| AsuHPI | GGTGA | 1 cut(s) | 248 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 18, 50 |
| BauI | CACGAG | 1 cut(s) | 348 |
| BbvI | GCAGC | 1 cut(s) | 321 |
| BccI | CCATC | 4 cut(s) | 57, 79, 137, 196 |
| BcoDI | GTCTC | 1 cut(s) | 206 |
| BisI | GCNGC | 1 cut(s) | 310 |
| BlsI | GCNGC | 1 cut(s) | 311 |
| BseGI | GGATG | 2 cut(s) | 289, 301 |
| BseRI | GAGGAG | 1 cut(s) | 162 |
| BseXI | GCAGC | 1 cut(s) | 321 |
| BslFI | GGGAC | 1 cut(s) | 389 |
| BsmAI | GTCTC | 1 cut(s) | 206 |
| BsmBI | CGTCTC | 1 cut(s) | 206 |
| BsmFI | GGGAC | 1 cut(s) | 389 |
| BssSI | CACGAG | 1 cut(s) | 348 |
| Bst2BI | CACGAG | 1 cut(s) | 348 |
| Bst4CI | ACNGT | 1 cut(s) | 269 |
| BstF5I | GGATG | 2 cut(s) | 289, 301 |
| BstMAI | GTCTC | 1 cut(s) | 206 |
| BstV1I | GCAGC | 1 cut(s) | 321 |
| BtsCI | GGATG | 2 cut(s) | 289, 301 |
| BtsIMutI | CAGTG | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 55 |
| CviJI | RGCY | 3 cut(s) | 63, 160, 323 |
| CviKI_1 | RGCY | 3 cut(s) | 63, 160, 323 |
| CviQI | GTAC | 1 cut(s) | 55 |
| Esp3I | CGTCTC | 1 cut(s) | 206 |
| FaqI | GGGAC | 1 cut(s) | 389 |
| FblI | GTMKAC | 2 cut(s) | 34, 246 |
| Fnu4HI | GCNGC | 1 cut(s) | 310 |
| FokI | GGATG | 2 cut(s) | 296, 308 |
| Fsp4HI | GCNGC | 1 cut(s) | 310 |
| GluI | GCNGC | 1 cut(s) | 310 |
| HinfI | GANTC | 1 cut(s) | 360 |
| HphI | GGTGA | 1 cut(s) | 248 |
| Hpy166II | GTNNAC | 2 cut(s) | 35, 247 |
| Hpy188I | TCNGA | 4 cut(s) | 76, 91, 175, 403 |
| Hpy8I | GTNNAC | 2 cut(s) | 35, 247 |
| HpyAV | CCTTC | 4 cut(s) | 122, 215, 376, 411 |
| HpyCH4III | ACNGT | 1 cut(s) | 269 |
| HpyCH4IV | ACGT | 1 cut(s) | 215 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpySE526I | ACGT | 1 cut(s) | 215 |
| LpnPI | CCDG | 1 cut(s) | 364 |
| Lsp1109I | GCAGC | 1 cut(s) | 321 |
| MaeII | ACGT | 1 cut(s) | 215 |
| MaeIII | GTNAC | 1 cut(s) | 66 |
| MboII | GAAGA | 2 cut(s) | 92, 131 |
| MluCI | AATT | 4 cut(s) | 111, 177, 271, 404 |
| MnlI | CCTC | 2 cut(s) | 140, 366 |
| MseI | TTAA | 2 cut(s) | 9, 251 |
| PfeI | GAWTC | 1 cut(s) | 360 |
| PkrI | GCNGC | 1 cut(s) | 311 |
| RsaI | GTAC | 1 cut(s) | 56 |
| RsaNI | GTAC | 1 cut(s) | 55 |
| SaqAI | TTAA | 2 cut(s) | 9, 251 |
| SatI | GCNGC | 1 cut(s) | 310 |
| SetI | ASST | 6 cut(s) | 9, 65, 218, 238, 325, 387 |
| SgeI | CNNG | 9 cut(s) | 17, 42, 76, 173, 271, 360, 362, 381, 391 |
| Sse9I | AATT | 4 cut(s) | 111, 177, 271, 404 |
| TaaI | ACNGT | 1 cut(s) | 269 |
| TaiI | ACGT | 1 cut(s) | 218 |
| TasI | AATT | 4 cut(s) | 111, 177, 271, 404 |
| TfiI | GAWTC | 1 cut(s) | 360 |
| Tru1I | TTAA | 2 cut(s) | 9, 251 |
| Tru9I | TTAA | 2 cut(s) | 9, 251 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseI | GCWGC | 1 cut(s) | 309 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XapI | RAATTY | 1 cut(s) | 404 |
| XmiI | GTMKAC | 2 cut(s) | 34, 246 |