Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003092

Physical Location & Seq

Genomic Coordinates Forward (+)

31166051 .. 31170384

Gene Structure 4334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013409

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGTGGACATGGCCCGGGCCTCCTGCGCCGGCGAGAACTGGAGGAGAGGAAATCAGGTGGAAGTTTACGATTTCGAAAGGGGCCAGTCCCTTCCGCCGCTGTCATTCCTTCCACCTCAGAATCTAATGGGGCCTAGGTGGAAAGGAAATAGCTCTGAAGCTAAATCTCGGTCTAAAGCGAAAGCTCTTGCACAACCCATGTCAAAGATAGTATTGAAGCTTCAGTCTTCTCTAATCGGATTGAGTTCTCGAGGGTTTCTATGTGGGAGCAGTGTGCTTGTTGAAGTGATAGCAGAACAAGCTAATCTTCTTGAATCTGCTTGCTTTGGTGTTAGAGTGATGGAGAATAAGCACTGGTTTCAGCTGTGTATGGAAGAGGCCTTTTACCTATGCCATTCTCTGAAATGCCTCGAGATTGTTGAAGATAAGTGCTCCAAGAATGATAACCAGCTATGGAAGTGCATGGAATCCAGAAGAGCATCGTTCCCCTATTTGTACAAGGCTTATTCTCATCTTAGAATGAAAAATTGGGTTGTCAGGTCAGGAGTTAAATATGGTGTGGACTTTGTTGCCTACCGCCATCATCCAGCTCTAGTTCACTCTGAATATGCGGTGATTGTATTGTCAGAGGAACATAGTGATGGAAATAAGCGACTGACGGAGTGGTTAGATATTCATTGTACTACTCGTCTTTGTGGAGGTGTTGCAAAGACATTGTTAGTTCTGTATATCAGCAGAAATGGTCATAGTGTGGACTCCCCATCAAGTGTGGAGAGATTTACTGTTGAAGAGCGTACAATAACAAGATGGAAGCCAGAGCAATGCCGTGCGGACGAGCGATTAGTTCAAAGTGAAAAGGGAATCGAATCGGAGCAACTCGCTGCTGATATATTCTCCCGCTGTTCTCACTCTACCGGGGCTTTGCTTCTATTGGATGGTAGTGATACTAGTATTTCCTTGGAAGATATATATACAAAGGTTTCAGATGGAAAGAATAAGTTCTTGTTGGAGGAATTTAGAGCTTATAAGCAACTCAGATACCTTGGTTACATTGTTGCGAGACATGGTATTCCCTGGTCTATGAAGGGTGTCAAGGCTAACTGTGAATCTGTTTCTTCTCAAATTTGTCCTGAACCTGAAGAGATTAGGTCTGTCAATGGCTTGTTCAAGGGGATACAGATTAATGAAGTGAGGGCAGTTTTTGATATTTATCTTCCAAACAGCAAGTTCAAGAAATCCTCTCCTGGTGATCCAAATTTTGTGCTCTGCTTTACTAGGGGCCATCCACCTTCCAAACCAGACCTTGAAGCCCTTGAGAGACAATTTGGTAGCATTGCTTTGAAGTTTTGTCATGTGGAGGAAGACTCTGTGAGTTTCTATTCCTTTGACAAAGTGGAACTTCATGTTGTCTCATTTCATCTGCAAAATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000213 GO:0000214 GO:0000278 GO:0000281 GO:0000379 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016892 GO:0016894 GO:0022402 GO:0022414 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0061640 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:0140101 GO:1901360 GO:1902494 GO:1902555 GO:1903047 GO:1905348

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_int_endo tRNA_int_endo_N

Protein Analysis

478

Amino Acids

54.12

Weight (kDa)

8.07

Isoelectric Point (pI)

50.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_int_endo_N	PF02778	84 - 152	5.2e-09	tRNA intron endonuclease, N-terminal domain
tRNA_int_endo	PF01974	165 - 248	7.6e-18	tRNA intron endonuclease, catalytic C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003092)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45577 AT3G45590 AT3G45590 AT5G60230 AT5G60230
fragaria_vesca	FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101
rosa_chinensis	RchiOBHm_Chr6g0276201
rosa_laevigata	RLG00000013409 RLG00000025847
rosa_multiflora	Rmu_sc0002063.1_g000007 Rmu_sc0004048.1_g000016 Rmu_sc0008839.1_g000006
rosa_roxburghii	Rroxscaffold_2G00125430 Rroxscaffold_7G00192490
rosa_rugosa	Rorug06G0098800 Rorug06G0098900 Rorug06G0098900 Rorug06G0099000 Rorug06G0099100 Rorug06G0099200 Rorug06G0099300 Rorug06G0124300
rosa_samantha	Rh1AG171200 Rh3BG017000 Rh3DG017300 Rh5BG538000 Rh5CG561900 Rh6AG210700 Rh6BG214900 Rh6DG207200
rosa_wichuraiana	Rw6G018360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1026
AciI	CCGC	6 cut(s)	95, 98, 577, 611, 830, 898
AclWI	GGATC	1 cut(s)	1244
AcsI	RAATTY	4 cut(s)	1013, 1122, 1255, 1426
AcuI	CTGAAG	3 cut(s)	177, 206, 1158
AfaI	GTAC	3 cut(s)	497, 682, 796
AhlI	ACTAGT	1 cut(s)	947
AjnI	CCWGG	2 cut(s)	1073, 1243
AjuI	GAANNNNNNNTTGG	2 cut(s)	511, 543
AluBI	AGCT	9 cut(s)	153, 161, 185, 220, 302, 364, 451, 590, 1022
AluI	AGCT	9 cut(s)	153, 161, 185, 220, 302, 364, 451, 590, 1022
Alw21I	GWGCWC	2 cut(s)	434, 1266
Alw26I	GTCTC	3 cut(s)	1054, 1312, 1414
AlwI	GGATC	1 cut(s)	1244
Ama87I	CYCGRG	3 cut(s)	15, 249, 410
AoxI	GGCC	6 cut(s)	12, 18, 82, 131, 378, 1279
ApeKI	GCWGC	1 cut(s)	881
ApoI	RAATTY	4 cut(s)	1013, 1122, 1255, 1426
AseI	ATTAAT	1 cut(s)	1182
Asp700I	GAANNNNTTC	1 cut(s)	998
AspA2I	CCTAGG	1 cut(s)	134
AspLEI	GCGC	1 cut(s)	29
AspS9I	GGNCC	5 cut(s)	13, 18, 82, 131, 1279
AsuC2I	CCSGG	3 cut(s)	16, 17, 916
AsuHPI	GGTGA	2 cut(s)	625, 1259
AsuII	TTCGAA	1 cut(s)	75
AvaI	CYCGRG	3 cut(s)	15, 249, 410
AvrII	CCTAGG	1 cut(s)	134
BaeI	ACNNNNGTAYC	2 cut(s)	1030, 1063
BarI	GAAGNNNNNNTAC	2 cut(s)	204, 236
BbsI	GAAGAC	2 cut(s)	219, 1368
Bbv12I	GWGCWC	2 cut(s)	434, 1266
BbvI	GCAGC	1 cut(s)	868
BccI	CCATC	8 cut(s)	334, 588, 635, 769, 801, 929, 980, 1290
BceAI	ACGGC	1 cut(s)	810
BciT130I	CCWGG	2 cut(s)	1075, 1245
BciVI	GTATCC	1 cut(s)	1167
BcnI	CCSGG	3 cut(s)	16, 17, 916
BcoDI	GTCTC	3 cut(s)	1054, 1312, 1414
BcuI	ACTAGT	1 cut(s)	947
BfaI	CTAG	4 cut(s)	135, 593, 948, 1275
BfuI	GTATCC	1 cut(s)	1167
BisI	GCNGC	2 cut(s)	98, 882
BlnI	CCTAGG	1 cut(s)	134
BlsI	GCNGC	2 cut(s)	99, 883
Bme1390I	CCNGG	5 cut(s)	16, 17, 916, 1075, 1245
BmeT110I	CYCGRG	3 cut(s)	15, 249, 410
BmgT120I	GGNCC	5 cut(s)	13, 18, 82, 131, 1279
BmiI	GGNNCC	3 cut(s)	83, 132, 1280
BmrFI	CCNGG	5 cut(s)	16, 17, 916, 1075, 1245
BmsI	GCATC	1 cut(s)	488
BpiI	GAAGAC	2 cut(s)	219, 1368
BplI	GAGNNNNNCTC	2 cut(s)	1349, 1381
BpmI	CTGGAG	1 cut(s)	61
Bpu14I	TTCGAA	1 cut(s)	75
BpuEI	CTTGAG	1 cut(s)	1334
BpuMI	CCSGG	3 cut(s)	16, 17, 916
BsaBI	GATNNNNATC	1 cut(s)	1209
BsaJI	CCNNGG	6 cut(s)	15, 134, 915, 957, 1042, 1073
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	3 cut(s)	44, 85, 359
Bse3DI	GCAATG	2 cut(s)	827, 1332
Bse8I	GATNNNNATC	1 cut(s)	1209
BseBI	CCWGG	2 cut(s)	1075, 1245
BseDI	CCNNGG	6 cut(s)	15, 134, 915, 957, 1042, 1073
BseGI	GGATG	3 cut(s)	583, 940, 1282
BseJI	GATNNNNATC	1 cut(s)	1209
BseMI	GCAATG	2 cut(s)	827, 1332
BseMII	CTCAG	2 cut(s)	131, 1048
BseNI	ACTGG	3 cut(s)	44, 85, 359
BseRI	GAGGAG	1 cut(s)	58
BseXI	GCAGC	1 cut(s)	868
BshFI	GGCC	6 cut(s)	14, 20, 84, 133, 380, 1281
BsiHKAI	GWGCWC	2 cut(s)	434, 1266
BsiHKCI	CYCGRG	3 cut(s)	15, 249, 410
BsiSI	CCGG	3 cut(s)	16, 30, 915
BslFI	GGGAC	1 cut(s)	73
BsmAI	GTCTC	3 cut(s)	1054, 1312, 1414
BsmFI	GGGAC	1 cut(s)	73
BsnI	GGCC	6 cut(s)	14, 20, 84, 133, 380, 1281
BsoBI	CYCGRG	3 cut(s)	15, 249, 410
Bsp119I	TTCGAA	1 cut(s)	75
Bsp1286I	GDGCHC	2 cut(s)	434, 1266
Bsp1407I	TGTACA	1 cut(s)	495
Bsp143I	GATC	1 cut(s)	1249
BspACI	CCGC	6 cut(s)	95, 98, 577, 611, 830, 898
BspANI	GGCC	6 cut(s)	14, 20, 84, 133, 380, 1281
BspCNI	CTCAG	2 cut(s)	130, 1047
BspLI	GGNNCC	3 cut(s)	83, 132, 1280
BspPI	GGATC	1 cut(s)	1244
BspQI	GCTCTTC	2 cut(s)	469, 783
BspT104I	TTCGAA	1 cut(s)	75
BsrDI	GCAATG	2 cut(s)	827, 1332
BsrFI	RCCGGY	1 cut(s)	29
BsrGI	TGTACA	1 cut(s)	495
BsrI	ACTGG	3 cut(s)	44, 85, 359
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	6 cut(s)	15, 134, 915, 957, 1042, 1073
BssMI	GATC	1 cut(s)	1249
BssT1I	CCWWGG	3 cut(s)	134, 957, 1042
Bst2UI	CCWGG	2 cut(s)	1075, 1245
Bst4CI	ACNGT	2 cut(s)	784, 1103
Bst6I	CTCTTC	4 cut(s)	369, 469, 783, 1134
BstAUI	TGTACA	1 cut(s)	495
BstBI	TTCGAA	1 cut(s)	75
BstC8I	GCNNGC	2 cut(s)	31, 322
BstDEI	CTNAG	3 cut(s)	117, 515, 1034
BstF5I	GGATG	3 cut(s)	583, 940, 1282
BstHHI	GCGC	1 cut(s)	29
BstKTI	GATC	1 cut(s)	1252
BstMAI	GTCTC	3 cut(s)	1054, 1312, 1414
BstMBI	GATC	1 cut(s)	1249
BstMWI	GCNNNNNNNGC	2 cut(s)	26, 299
BstNI	CCWGG	2 cut(s)	1075, 1245
BstSCI	CCNGG	5 cut(s)	14, 15, 914, 1073, 1243
BstV1I	GCAGC	1 cut(s)	868
BstV2I	GAAGAC	2 cut(s)	219, 1368
BsuI	GTATCC	1 cut(s)	1167
BsuRI	GGCC	6 cut(s)	14, 20, 84, 133, 380, 1281
BtsCI	GGATG	3 cut(s)	583, 940, 1282
BtsI	GCAGTG	1 cut(s)	277
BtsIMutI	CAGTG	2 cut(s)	277, 352
Cac8I	GCNNGC	2 cut(s)	31, 322
CfoI	GCGC	1 cut(s)	29
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	5 cut(s)	13, 18, 82, 131, 1279
Cfr9I	CCCGGG	1 cut(s)	15
Csp6I	GTAC	3 cut(s)	496, 681, 795
CviAII	CATG	6 cut(s)	10, 199, 463, 1064, 1352, 1403
CviQI	GTAC	3 cut(s)	496, 681, 795
DdeI	CTNAG	3 cut(s)	117, 515, 1034
DpnI	GATC	1 cut(s)	1251
DpnII	GATC	1 cut(s)	1249
Eam1104I	CTCTTC	4 cut(s)	369, 469, 783, 1134
EarI	CTCTTC	4 cut(s)	369, 469, 783, 1134
EciI	GGCGGA	1 cut(s)	84
Eco130I	CCWWGG	3 cut(s)	134, 957, 1042
Eco147I	AGGCCT	1 cut(s)	380
Eco57I	CTGAAG	3 cut(s)	177, 206, 1158
Eco88I	CYCGRG	3 cut(s)	15, 249, 410
EcoO109I	RGGNCCY	1 cut(s)	131
EcoRII	CCWGG	2 cut(s)	1073, 1243
EcoT14I	CCWWGG	3 cut(s)	134, 957, 1042
ErhI	CCWWGG	3 cut(s)	134, 957, 1042
FaeI	CATG	6 cut(s)	13, 202, 466, 1067, 1355, 1406
FalI	AAGNNNNNCTT	4 cut(s)	291, 323, 1383, 1415
FaqI	GGGAC	1 cut(s)	73
FatI	CATG	6 cut(s)	9, 198, 462, 1063, 1351, 1402
FauI	CCCGC	1 cut(s)	905
Fnu4HI	GCNGC	2 cut(s)	98, 882
FokI	GGATG	3 cut(s)	570, 947, 1269
Fsp4HI	GCNGC	2 cut(s)	98, 882
FspBI	CTAG	4 cut(s)	135, 593, 948, 1275
GlaI	GCGC	1 cut(s)	28
GluI	GCNGC	2 cut(s)	98, 882
GsuI	CTGGAG	1 cut(s)	61
HaeIII	GGCC	6 cut(s)	14, 20, 84, 133, 380, 1281
HapII	CCGG	3 cut(s)	16, 30, 915
HhaI	GCGC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	13, 202, 466, 1067, 1355, 1406
Hin6I	GCGC	1 cut(s)	27
HinP1I	GCGC	1 cut(s)	27
HindIII	AAGCTT	1 cut(s)	218
HinfI	GANTC	8 cut(s)	121, 314, 467, 755, 861, 866, 1106, 1364
HpaII	CCGG	3 cut(s)	16, 30, 915
HphI	GGTGA	2 cut(s)	625, 1259
Hpy166II	GTNNAC	5 cut(s)	7, 67, 562, 598, 754
Hpy188I	TCNGA	9 cut(s)	120, 157, 239, 402, 604, 628, 871, 985, 1037
Hpy188III	TCNNGA	7 cut(s)	249, 311, 412, 471, 543, 1130, 1231
Hpy8I	GTNNAC	5 cut(s)	7, 67, 562, 598, 754
HpyAV	CCTTC	4 cut(s)	101, 119, 1078, 1299
HpyCH4III	ACNGT	2 cut(s)	784, 1103
HpyCH4V	TGCA	4 cut(s)	191, 462, 707, 1423
HpyF10VI	GCNNNNNNNGC	2 cut(s)	26, 299
HpyF3I	CTNAG	3 cut(s)	117, 515, 1034
Hsp92II	CATG	6 cut(s)	13, 202, 466, 1067, 1355, 1406
HspAI	GCGC	1 cut(s)	27
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
Kzo9I	GATC	1 cut(s)	1249
LguI	GCTCTTC	2 cut(s)	469, 783
LmnI	GCTCC	3 cut(s)	267, 437, 871
Lsp1109I	GCAGC	1 cut(s)	868
LweI	GCATC	1 cut(s)	488
MaeI	CTAG	4 cut(s)	135, 593, 948, 1275
MaeIII	GTNAC	1 cut(s)	1046
MalI	GATC	1 cut(s)	1251
MboI	GATC	1 cut(s)	1249
MhlI	GDGCHC	2 cut(s)	434, 1266
MluCI	AATT	6 cut(s)	526, 1013, 1122, 1255, 1322, 1426
MlyI	GAGTC	2 cut(s)	749, 1358
MmeI	TCCRAC	1 cut(s)	987
MreI	CGCCGGCG	1 cut(s)	29
MroNI	GCCGGC	1 cut(s)	29
MroXI	GAANNNNTTC	1 cut(s)	998
MseI	TTAA	2 cut(s)	549, 1182
MslI	CAYNNNNRTG	1 cut(s)	639
MspA1I	CMGCKG	3 cut(s)	100, 364, 900
MspI	CCGG	3 cut(s)	16, 30, 915
MspR9I	CCNGG	5 cut(s)	16, 17, 916, 1075, 1245
MvaI	CCWGG	2 cut(s)	1075, 1245
MwoI	GCNNNNNNNGC	2 cut(s)	26, 299
NaeI	GCCGGC	1 cut(s)	31
NciI	CCSGG	3 cut(s)	16, 17, 916
NdeII	GATC	1 cut(s)	1249
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	6 cut(s)	13, 202, 466, 1067, 1355, 1406
NlaIV	GGNNCC	3 cut(s)	83, 132, 1280
NspV	TTCGAA	1 cut(s)	75
PaeR7I	CTCGAG	2 cut(s)	249, 410
PceI	AGGCCT	1 cut(s)	380
PciSI	GCTCTTC	2 cut(s)	469, 783
PdiI	GCCGGC	1 cut(s)	31
PdmI	GAANNNNTTC	1 cut(s)	998
PfeI	GAWTC	6 cut(s)	121, 314, 467, 861, 866, 1106
PkrI	GCNGC	2 cut(s)	99, 883
PleI	GAGTC	2 cut(s)	749, 1358
PpsI	GAGTC	2 cut(s)	749, 1358
PshBI	ATTAAT	1 cut(s)	1182
PsiI	TTATAA	1 cut(s)	1026
Psp6I	CCWGG	2 cut(s)	1073, 1243
PspGI	CCWGG	2 cut(s)	1073, 1243
PspN4I	GGNNCC	3 cut(s)	83, 132, 1280
PspPI	GGNCC	5 cut(s)	13, 18, 82, 131, 1279
PvuII	CAGCTG	1 cut(s)	364
RsaI	GTAC	3 cut(s)	497, 682, 796
RsaNI	GTAC	3 cut(s)	496, 681, 795
RseI	CAYNNNNRTG	1 cut(s)	639
SapI	GCTCTTC	2 cut(s)	469, 783
SaqAI	TTAA	2 cut(s)	549, 1182
SatI	GCNGC	2 cut(s)	98, 882
Sau3AI	GATC	1 cut(s)	1249
Sau96I	GGNCC	5 cut(s)	13, 18, 82, 131, 1279
SchI	GAGTC	2 cut(s)	749, 1358
ScrFI	CCNGG	5 cut(s)	16, 17, 916, 1075, 1245
SduI	GDGCHC	2 cut(s)	434, 1266
SfaNI	GCATC	1 cut(s)	488
Sfr274I	CTCGAG	2 cut(s)	249, 410
SfuI	TTCGAA	1 cut(s)	75
SgrAI	CRCCGGYG	1 cut(s)	29
SlaI	CTCGAG	2 cut(s)	249, 410
SmaI	CCCGGG	1 cut(s)	17
SmiMI	CAYNNNNRTG	1 cut(s)	639
SmlI	CTYRAG	3 cut(s)	249, 410, 1313
SmoI	CTYRAG	3 cut(s)	249, 410, 1313
SpeI	ACTAGT	1 cut(s)	947
SrfI	GCCCGGGC	1 cut(s)	17
Sse9I	AATT	6 cut(s)	526, 1013, 1122, 1255, 1322, 1426
SseBI	AGGCCT	1 cut(s)	380
SsiI	CCGC	6 cut(s)	95, 98, 577, 611, 830, 898
SspMI	CTAG	4 cut(s)	135, 593, 948, 1275
StuI	AGGCCT	1 cut(s)	380
StyD4I	CCNGG	5 cut(s)	14, 15, 914, 1073, 1243
StyI	CCWWGG	3 cut(s)	134, 957, 1042
TaaI	ACNGT	2 cut(s)	784, 1103
TaqI	TCGA	4 cut(s)	75, 250, 411, 864
TaqII	GACCGA	1 cut(s)	159
TasI	AATT	6 cut(s)	526, 1013, 1122, 1255, 1322, 1426
TatI	WGTACW	2 cut(s)	495, 680
TauI	GCSGC	1 cut(s)	100
TfiI	GAWTC	6 cut(s)	121, 314, 467, 861, 866, 1106
Tru1I	TTAA	2 cut(s)	549, 1182
Tru9I	TTAA	2 cut(s)	549, 1182
TscAI	CASTG	2 cut(s)	277, 359
TseI	GCWGC	1 cut(s)	881
TspDTI	ATGAA	6 cut(s)	536, 665, 1097, 1200, 1391, 1406
TspGWI	ACGGA	1 cut(s)	674
TspMI	CCCGGG	1 cut(s)	15
TspRI	CASTG	2 cut(s)	277, 359
VspI	ATTAAT	1 cut(s)	1182
XapI	RAATTY	4 cut(s)	1013, 1122, 1255, 1426
XhoI	CTCGAG	2 cut(s)	249, 410
XmaI	CCCGGG	1 cut(s)	15
XmaJI	CCTAGG	1 cut(s)	134
XmnI	GAANNNNTTC	1 cut(s)	998
XspI	CTAG	4 cut(s)	135, 593, 948, 1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.