Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0003092

Physical Location & Seq

Genomic Coordinates Reverse (-)

1073988 .. 1078201

Gene Structure 4214 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG017000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGGGGAACGATACAGAGTTGGTGACCCCAGGTGAAAAGCTTGGAAGAGCCTCCGAATTCAAAGCAGGCAGAGGTGCCTACGTGTCACCTGATAATCTCACCGTCTACGCTTCCCTCACTGGCCTCCGCCGCATCCTATCCCCGCCTCCTGACTCACCTGACCAGAGACCCATTGTGGAAGTAACTGGTCACAAGGCCCATGGTGCTATTCCGGAGCCTGGATCTATTGTCATTGCCAGAGTTACCAAAGTGATGGCCAGAATGGCTTCTGCTGATATCATGTGTCTAGGCACCAAGTCTGTGCGGGAAAACTTTACCGGCATTATTAGGCTTCAAGATATTAGAGCAACCGAGATTGATAAAGTGGATATGCACAAGTCTTTTCACCCTGGTGACATTGTCAGAGCTATTGTGCTATCCCTTGGAGATGCAAGAGCTTACTTTCTGTCAACTGCAAAGAATGAGCTGGGTGTTATTTCTGCTCAGAGTGCAGCAGGTGTGCCAATGGTGGCAATAAGTTGGACAGAGATGCAATGCCCCATCACAGGGCAAATTGAGCACAGAAAGGTTGCTAAGAATCTAATGGGGCCCAGATGGAAAGGAAAGGGCTTCAAAGCTAAAGCTCTTGCTGACCCCATGTCAAAGGTAGTACTGCAGCTTCAGTCTTCTCTAAATCAATCAAACTGTGAAGGGTTGCTATGTGGGTGTAGCGTGCTTCTCTCAGTTGAAGCAGAACAAGCTGATCTCCTTAACCGTTCGTGCTTTGGTGAAGCCATGGTTACTGCTGAGAAGGATAAGCAATGGTTTGAGTTGAGTTTGGAGGAGGGCTTTTATCTGAGCTATGCTCTAAAATGCCTCAGGATAGTTGAAGATAAATGTCTGAAGAGTGATGAGCAGCTATGGCAGTGCATGAAGTCTAGAAGTGCATTGTTTCCGTATTTCTATAAGGTGTATTCTCATCTTAGGATGAAGAATTGGGTTGTTATGTCAGGGATTACATATGGTGTGGACTTTGTTGCTTACCGTCATCATCCAGAGTTGGTACATTCTGAATATGCGGTGATTGTGTCATCGGAGGAGGAGGAGGGTGGTGCAAATAATCGATTGAGGGTGTGGTCTGATGTGCATTGCGCTACTCGGCTTTGTGGAGGTGTGGCAAAGACATTACTGGTTCTTGATATCAGCAGAAATGGTCATAGTGCAGACTCTTTATCGTGTTTGGAGAGTTATACTGTCAAGGAGCGCACGATAACAAGATGGAATCCAGAACAGTGCCGTGAAGATCATACAATGGTTGAAAGTGAAAATGGAGCCAAGGAAGAGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000213 GO:0000214 GO:0000278 GO:0000281 GO:0000379 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016892 GO:0016894 GO:0022402 GO:0022414 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0061640 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:0140101 GO:1901360 GO:1902494 GO:1902555 GO:1903047 GO:1905348

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_int_endo tRNA_int_endo_N

Protein Analysis

442

Amino Acids

48.96

Weight (kDa)

6.65

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ECR1_N	PF14382	7 - 45	3.6e-09	Exosome complex exonuclease RRP4 N-terminal region
EXOSC1	PF10447	100 - 141	3.1e-11	Exosome component EXOSC1/CSL4
tRNA_int_endo_N	PF02778	230 - 301	4.1e-12	tRNA intron endonuclease, N-terminal domain
tRNA_int_endo	PF01974	315 - 397	2.5e-15	tRNA intron endonuclease, catalytic C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003092)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45577 AT3G45590 AT3G45590 AT5G60230 AT5G60230
fragaria_vesca	FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101
rosa_chinensis	RchiOBHm_Chr6g0276201
rosa_laevigata	RLG00000013409 RLG00000025847
rosa_multiflora	Rmu_sc0002063.1_g000007 Rmu_sc0004048.1_g000016 Rmu_sc0008839.1_g000006
rosa_roxburghii	Rroxscaffold_2G00125430 Rroxscaffold_7G00192490
rosa_rugosa	Rorug06G0098800 Rorug06G0098900 Rorug06G0098900 Rorug06G0099000 Rorug06G0099100 Rorug06G0099200 Rorug06G0099300 Rorug06G0124300
rosa_samantha	Rh1AG171200 Rh3BG017000 Rh3DG017300 Rh5BG538000 Rh5CG561900 Rh6AG210700 Rh6BG214900 Rh6DG207200
rosa_wichuraiana	Rw6G018360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	485
Acc36I	ACCTGC	1 cut(s)	485
AccB1I	GGYRCC	2 cut(s)	74, 290
AccI	GTMKAC	1 cut(s)	105
AccIII	TCCGGA	1 cut(s)	211
AciI	CCGC	5 cut(s)	127, 130, 143, 304, 1058
AclWI	GGATC	1 cut(s)	229
AcoI	YGGCCR	1 cut(s)	255
AcsI	RAATTY	1 cut(s)	56
AcuI	CTGAAG	2 cut(s)	644, 902
AfaI	GTAC	2 cut(s)	651, 1044
AfiI	CCNNNNNNNGG	3 cut(s)	218, 545, 546
AflIII	ACRYGT	1 cut(s)	81
AgsI	TTSAA	6 cut(s)	61, 335, 613, 728, 869, 1298
AhdI	GACNNNNNGTC	1 cut(s)	637
AjnI	CCWGG	3 cut(s)	28, 217, 388
AleI	CACNNNNGTG	1 cut(s)	390
Alw21I	GWGCWC	1 cut(s)	561
Alw26I	GTCTC	1 cut(s)	160
AlwI	GGATC	1 cut(s)	229
Aor13HI	TCCGGA	1 cut(s)	211
AoxI	GGCC	4 cut(s)	121, 195, 255, 587
ApaI	GGGCCC	1 cut(s)	591
ApeKI	GCWGC	3 cut(s)	491, 655, 895
ApoI	RAATTY	1 cut(s)	56
Asp700I	GAANNNNTTC	1 cut(s)	265
AspLEI	GCGC	2 cut(s)	1133, 1245
AspS9I	GGNCC	3 cut(s)	196, 587, 588
AsuHPI	GGTGA	9 cut(s)	34, 44, 78, 91, 147, 377, 404, 779, 1072
AxyI	CCTNAGG	1 cut(s)	857
BaeGI	GKGCMC	1 cut(s)	591
BalI	TGGCCA	1 cut(s)	257
BanI	GGYRCC	2 cut(s)	74, 290
BanII	GRGCYC	1 cut(s)	591
BarI	GAAGNNNNNNTAC	2 cut(s)	642, 674
BbsI	GAAGAC	1 cut(s)	657
Bbv12I	GWGCWC	1 cut(s)	561
BbvI	GCAGC	3 cut(s)	503, 667, 907
BccI	CCATC	4 cut(s)	247, 548, 588, 1251
BceAI	ACGGC	1 cut(s)	1260
BciT130I	CCWGG	3 cut(s)	30, 219, 390
BcoDI	GTCTC	1 cut(s)	160
BfaI	CTAG	2 cut(s)	287, 918
BfmI	CTRYAG	1 cut(s)	653
BfuAI	ACCTGC	1 cut(s)	485
BglI	GCCNNNNNGGC	1 cut(s)	263
BisI	GCNGC	4 cut(s)	130, 492, 656, 896
BlsI	GCNGC	4 cut(s)	131, 493, 657, 897
BmcAI	AGTACT	1 cut(s)	651
Bme1390I	CCNGG	3 cut(s)	30, 219, 390
BmeRI	GACNNNNNGTC	1 cut(s)	637
BmgT120I	GGNCC	3 cut(s)	196, 587, 588
BmiI	GGNNCC	6 cut(s)	76, 216, 292, 588, 589, 1312
BmrFI	CCNGG	3 cut(s)	30, 219, 390
BmsI	GCATC	3 cut(s)	141, 418, 519
BpiI	GAAGAC	1 cut(s)	657
BplI	GAGNNNNNCTC	2 cut(s)	829, 861
Bsa29I	ATCGAT	1 cut(s)	1102
BsaAI	YACGTR	1 cut(s)	82
BsaI	GGTCTC	1 cut(s)	160
BsaJI	CCNNGG	6 cut(s)	28, 199, 388, 421, 774, 1314
BsaWI	WCCGGW	1 cut(s)	211
Bsc4I	CCNNNNNNNGG	3 cut(s)	218, 545, 546
Bse118I	RCCGGY	1 cut(s)	317
Bse1I	ACTGG	3 cut(s)	124, 190, 1173
Bse21I	CCTNAGG	1 cut(s)	857
Bse3DI	GCAATG	4 cut(s)	231, 539, 806, 1126
BseAI	TCCGGA	1 cut(s)	211
BseBI	CCWGG	3 cut(s)	30, 219, 390
BseCI	ATCGAT	1 cut(s)	1102
BseDI	CCNNGG	6 cut(s)	28, 199, 388, 421, 774, 1314
BseGI	GGATG	3 cut(s)	132, 972, 1030
BseLI	CCNNNNNNNGG	3 cut(s)	218, 545, 546
BseMI	GCAATG	4 cut(s)	231, 539, 806, 1126
BseMII	CTCAG	5 cut(s)	497, 735, 777, 827, 871
BseNI	ACTGG	3 cut(s)	124, 190, 1173
BseRI	GAGGAG	4 cut(s)	836, 1091, 1094, 1097
BseSI	GKGCMC	1 cut(s)	591
BseXI	GCAGC	3 cut(s)	503, 667, 907
BseYI	CCCAGC	1 cut(s)	466
BsgI	GTGCAG	2 cut(s)	510, 1221
BshFI	GGCC	4 cut(s)	123, 197, 257, 589
BshNI	GGYRCC	2 cut(s)	74, 290
BshVI	ATCGAT	1 cut(s)	1102
BsiHKAI	GWGCWC	1 cut(s)	561
BsiSI	CCGG	2 cut(s)	212, 318
BslI	CCNNNNNNNGG	3 cut(s)	218, 545, 546
BsmAI	GTCTC	1 cut(s)	160
BsnI	GGCC	4 cut(s)	123, 197, 257, 589
Bso31I	GGTCTC	1 cut(s)	160
Bsp120I	GGGCCC	1 cut(s)	587
Bsp1286I	GDGCHC	2 cut(s)	561, 591
Bsp13I	TCCGGA	1 cut(s)	211
Bsp143I	GATC	3 cut(s)	221, 742, 1282
Bsp19I	CCATGG	2 cut(s)	199, 774
BspACI	CCGC	5 cut(s)	127, 130, 143, 304, 1058
BspANI	GGCC	4 cut(s)	123, 197, 257, 589
BspCNI	CTCAG	5 cut(s)	496, 734, 778, 828, 870
BspDI	ATCGAT	1 cut(s)	1102
BspEI	TCCGGA	1 cut(s)	211
BspLI	GGNNCC	6 cut(s)	76, 216, 292, 588, 589, 1312
BspMAI	CTGCAG	1 cut(s)	657
BspMI	ACCTGC	1 cut(s)	485
BspPI	GGATC	1 cut(s)	229
BspQI	GCTCTTC	1 cut(s)	40
BspT107I	GGYRCC	2 cut(s)	74, 290
BspTNI	GGTCTC	1 cut(s)	160
BsrDI	GCAATG	4 cut(s)	231, 539, 806, 1126
BsrFI	RCCGGY	1 cut(s)	317
BsrI	ACTGG	3 cut(s)	124, 190, 1173
BssAI	RCCGGY	1 cut(s)	317
BssECI	CCNNGG	6 cut(s)	28, 199, 388, 421, 774, 1314
BssMI	GATC	3 cut(s)	221, 742, 1282
BssT1I	CCWWGG	4 cut(s)	199, 421, 774, 1314
Bst2UI	CCWGG	3 cut(s)	30, 219, 390
Bst4CI	ACNGT	6 cut(s)	103, 686, 755, 1025, 1234, 1272
Bst6I	CTCTTC	3 cut(s)	40, 878, 1314
BstBAI	YACGTR	1 cut(s)	82
BstC8I	GCNNGC	2 cut(s)	67, 713
BstDEI	CTNAG	7 cut(s)	483, 573, 721, 786, 836, 857, 962
BstDSI	CCRYGG	2 cut(s)	199, 774
BstEII	GGTNACC	1 cut(s)	22
BstF5I	GGATG	3 cut(s)	132, 972, 1030
BstHHI	GCGC	2 cut(s)	1133, 1245
BstKTI	GATC	3 cut(s)	224, 745, 1285
BstMAI	GTCTC	1 cut(s)	160
BstMBI	GATC	3 cut(s)	221, 742, 1282
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 203, 263, 488, 556, 737, 901
BstNI	CCWGG	3 cut(s)	30, 219, 390
BstPI	GGTNACC	1 cut(s)	22
BstSCI	CCNGG	3 cut(s)	28, 217, 388
BstSFI	CTRYAG	1 cut(s)	653
BstSLI	GKGCMC	1 cut(s)	591
BstV1I	GCAGC	3 cut(s)	503, 667, 907
BstV2I	GAAGAC	1 cut(s)	657
BstX2I	RGATCY	1 cut(s)	221
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	1 cut(s)	221
Bsu15I	ATCGAT	1 cut(s)	1102
Bsu36I	CCTNAGG	1 cut(s)	857
BsuRI	GGCC	4 cut(s)	123, 197, 257, 589
BsuTUI	ATCGAT	1 cut(s)	1102
BtgI	CCRYGG	2 cut(s)	199, 774
BtsCI	GGATG	3 cut(s)	132, 972, 1030
BtsI	GCAGTG	1 cut(s)	911
BtsIMutI	CAGTG	3 cut(s)	117, 911, 1277
BveI	ACCTGC	1 cut(s)	485
Cac8I	GCNNGC	2 cut(s)	67, 713
CfoI	GCGC	2 cut(s)	1133, 1245
Cfr10I	RCCGGY	1 cut(s)	317
Cfr13I	GGNCC	3 cut(s)	196, 587, 588
ClaI	ATCGAT	1 cut(s)	1102
Csp6I	GTAC	2 cut(s)	650, 1043
CviAII	CATG	5 cut(s)	200, 280, 637, 775, 910
CviQI	GTAC	2 cut(s)	650, 1043
DdeI	CTNAG	7 cut(s)	483, 573, 721, 786, 836, 857, 962
DpnI	GATC	3 cut(s)	223, 744, 1284
DpnII	GATC	3 cut(s)	221, 742, 1282
DriI	GACNNNNNGTC	1 cut(s)	637
EaeI	YGGCCR	1 cut(s)	255
Eam1104I	CTCTTC	3 cut(s)	40, 878, 1314
Eam1105I	GACNNNNNGTC	1 cut(s)	637
EarI	CTCTTC	3 cut(s)	40, 878, 1314
EciI	GGCGGA	1 cut(s)	116
Eco130I	CCWWGG	4 cut(s)	199, 421, 774, 1314
Eco24I	GRGCYC	1 cut(s)	591
Eco31I	GGTCTC	1 cut(s)	160
Eco32I	GATATC	2 cut(s)	277, 1180
Eco57I	CTGAAG	2 cut(s)	644, 902
Eco81I	CCTNAGG	1 cut(s)	857
Eco91I	GGTNACC	1 cut(s)	22
EcoO109I	RGGNCCY	1 cut(s)	587
EcoO65I	GGTNACC	1 cut(s)	22
EcoRI	GAATTC	1 cut(s)	56
EcoRII	CCWGG	3 cut(s)	28, 217, 388
EcoRV	GATATC	2 cut(s)	277, 1180
EcoT14I	CCWWGG	4 cut(s)	199, 421, 774, 1314
EcoT38I	GRGCYC	1 cut(s)	591
ErhI	CCWWGG	4 cut(s)	199, 421, 774, 1314
FaeI	CATG	5 cut(s)	203, 283, 640, 778, 913
FatI	CATG	5 cut(s)	199, 279, 636, 774, 909
FauI	CCCGC	2 cut(s)	150, 297
FauNDI	CATATG	1 cut(s)	1000
FblI	GTMKAC	1 cut(s)	105
Fnu4HI	GCNGC	4 cut(s)	130, 492, 656, 896
FokI	GGATG	3 cut(s)	119, 979, 1017
FriOI	GRGCYC	1 cut(s)	591
Fsp4HI	GCNGC	4 cut(s)	130, 492, 656, 896
FspBI	CTAG	2 cut(s)	287, 918
GlaI	GCGC	2 cut(s)	1132, 1244
GluI	GCNGC	4 cut(s)	130, 492, 656, 896
GsaI	CCCAGC	1 cut(s)	470
HaeIII	GGCC	4 cut(s)	123, 197, 257, 589
HapII	CCGG	2 cut(s)	212, 318
HhaI	GCGC	2 cut(s)	1133, 1245
Hin1II	CATG	5 cut(s)	203, 283, 640, 778, 913
Hin6I	GCGC	2 cut(s)	1131, 1243
HinP1I	GCGC	2 cut(s)	1131, 1243
HincII	GTYRAC	1 cut(s)	450
HindII	GTYRAC	1 cut(s)	450
HindIII	AAGCTT	1 cut(s)	38
HinfI	GANTC	4 cut(s)	152, 577, 1205, 1261
HpaII	CCGG	2 cut(s)	212, 318
HphI	GGTGA	9 cut(s)	34, 44, 78, 91, 147, 377, 404, 779, 1072
Hpy166II	GTNNAC	3 cut(s)	106, 450, 1009
Hpy188I	TCNGA	8 cut(s)	55, 404, 486, 837, 882, 1051, 1075, 1120
Hpy188III	TCNNGA	8 cut(s)	149, 212, 335, 859, 918, 1034, 1175, 1265
Hpy8I	GTNNAC	3 cut(s)	106, 450, 1009
HpyAV	CCTTC	2 cut(s)	683, 784
HpyCH4III	ACNGT	6 cut(s)	103, 686, 755, 1025, 1234, 1272
HpyCH4IV	ACGT	1 cut(s)	81
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 203, 263, 488, 556, 737, 901
HpyF3I	CTNAG	7 cut(s)	483, 573, 721, 786, 836, 857, 962
HpySE526I	ACGT	1 cut(s)	81
Hsp92II	CATG	5 cut(s)	203, 283, 640, 778, 913
HspAI	GCGC	2 cut(s)	1131, 1243
Kpn2I	TCCGGA	1 cut(s)	211
Kzo9I	GATC	3 cut(s)	221, 742, 1282
LguI	GCTCTTC	1 cut(s)	40
LmnI	GCTCC	3 cut(s)	214, 1240, 1310
Lsp1109I	GCAGC	3 cut(s)	503, 667, 907
LweI	GCATC	3 cut(s)	141, 418, 519
MaeI	CTAG	2 cut(s)	287, 918
MaeII	ACGT	1 cut(s)	81
MaeIII	GTNAC	7 cut(s)	22, 84, 181, 188, 241, 392, 778
MalI	GATC	3 cut(s)	223, 744, 1284
MboI	GATC	3 cut(s)	221, 742, 1282
MboII	GAAGA	6 cut(s)	57, 657, 881, 895, 982, 1292
MflI	RGATCY	1 cut(s)	221
MhlI	GDGCHC	2 cut(s)	561, 591
MlsI	TGGCCA	1 cut(s)	257
MluCI	AATT	3 cut(s)	56, 552, 973
MluNI	TGGCCA	1 cut(s)	257
MlyI	GAGTC	2 cut(s)	146, 1199
MmeI	TCCRAC	1 cut(s)	500
Mox20I	TGGCCA	1 cut(s)	257
MroI	TCCGGA	1 cut(s)	211
MroXI	GAANNNNTTC	1 cut(s)	265
MscI	TGGCCA	1 cut(s)	257
MseI	TTAA	1 cut(s)	750
MslI	CAYNNNNRTG	1 cut(s)	390
Msp20I	TGGCCA	1 cut(s)	257
MspI	CCGG	2 cut(s)	212, 318
MspR9I	CCNGG	3 cut(s)	30, 219, 390
MvaI	CCWGG	3 cut(s)	30, 219, 390
MwoI	GCNNNNNNNGC	7 cut(s)	129, 203, 263, 488, 556, 737, 901
NcoI	CCATGG	2 cut(s)	199, 774
NdeI	CATATG	1 cut(s)	1000
NdeII	GATC	3 cut(s)	221, 742, 1282
NlaIII	CATG	5 cut(s)	203, 283, 640, 778, 913
NlaIV	GGNNCC	6 cut(s)	76, 216, 292, 588, 589, 1312
NmeAIII	GCCGAG	1 cut(s)	1117
NmuCI	GTSAC	4 cut(s)	22, 84, 188, 392
OliI	CACNNNNGTG	1 cut(s)	390
PaqCI	CACCTGC	1 cut(s)	485
PciSI	GCTCTTC	1 cut(s)	40
PdmI	GAANNNNTTC	1 cut(s)	265
PfeI	GAWTC	2 cut(s)	577, 1261
PflFI	GACNNNGTC	1 cut(s)	398
PkrI	GCNGC	4 cut(s)	131, 493, 657, 897
PleI	GAGTC	2 cut(s)	146, 1199
PpsI	GAGTC	2 cut(s)	146, 1199
Ppu21I	YACGTR	1 cut(s)	82
Psp6I	CCWGG	3 cut(s)	28, 217, 388
PspEI	GGTNACC	1 cut(s)	22
PspFI	CCCAGC	1 cut(s)	466
PspGI	CCWGG	3 cut(s)	28, 217, 388
PspN4I	GGNNCC	6 cut(s)	76, 216, 292, 588, 589, 1312
PspOMI	GGGCCC	1 cut(s)	587
PspPI	GGNCC	3 cut(s)	196, 587, 588
PstI	CTGCAG	1 cut(s)	657
PsuI	RGATCY	1 cut(s)	221
PsyI	GACNNNGTC	1 cut(s)	398
RsaI	GTAC	2 cut(s)	651, 1044
RsaNI	GTAC	2 cut(s)	650, 1043
RseI	CAYNNNNRTG	1 cut(s)	390
SapI	GCTCTTC	1 cut(s)	40
SaqAI	TTAA	1 cut(s)	750
SatI	GCNGC	4 cut(s)	130, 492, 656, 896
Sau3AI	GATC	3 cut(s)	221, 742, 1282
Sau96I	GGNCC	3 cut(s)	196, 587, 588
ScaI	AGTACT	1 cut(s)	651
SchI	GAGTC	2 cut(s)	146, 1199
ScrFI	CCNGG	3 cut(s)	30, 219, 390
SduI	GDGCHC	2 cut(s)	561, 591
SfaNI	GCATC	3 cut(s)	141, 418, 519
SfcI	CTRYAG	1 cut(s)	653
SmiMI	CAYNNNNRTG	1 cut(s)	390
Sse9I	AATT	3 cut(s)	56, 552, 973
SsiI	CCGC	5 cut(s)	127, 130, 143, 304, 1058
SspMI	CTAG	2 cut(s)	287, 918
StyD4I	CCNGG	3 cut(s)	28, 217, 388
StyI	CCWWGG	4 cut(s)	199, 421, 774, 1314
TaaI	ACNGT	6 cut(s)	103, 686, 755, 1025, 1234, 1272
TaiI	ACGT	1 cut(s)	84
TaqI	TCGA	1 cut(s)	1102
TasI	AATT	3 cut(s)	56, 552, 973
TatI	WGTACW	1 cut(s)	649
TauI	GCSGC	1 cut(s)	132
TfiI	GAWTC	2 cut(s)	577, 1261
Tru1I	TTAA	1 cut(s)	750
Tru9I	TTAA	1 cut(s)	750
TscAI	CASTG	3 cut(s)	124, 911, 1277
TseFI	GTSAC	4 cut(s)	22, 84, 188, 392
TseI	GCWGC	3 cut(s)	491, 655, 895
Tsp45I	GTSAC	4 cut(s)	22, 84, 188, 392
TspDTI	ATGAA	2 cut(s)	926, 983
TspGWI	ACGGA	1 cut(s)	924
TspRI	CASTG	3 cut(s)	124, 911, 1277
Tth111I	GACNNNGTC	1 cut(s)	398
XapI	RAATTY	1 cut(s)	56
XbaI	TCTAGA	1 cut(s)	917
XmiI	GTMKAC	1 cut(s)	105
XmnI	GAANNNNTTC	1 cut(s)	265
XspI	CTAG	2 cut(s)	287, 918
ZrmI	AGTACT	1 cut(s)	651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.