Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003092

Physical Location & Seq

Genomic Coordinates Forward (+)

33674968 .. 33680322

Gene Structure 5355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00192490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGGACCTAGGTGGAAAGGAAATAGCTCTGAAGCTAAATCTCGGTCTAAAGCGAAAGCTCTTGCACAACCCATGTCAAAGATAGTAATGCAGCTTCACTCTTCTCTAATCGGATTGAGTTCTCGAGGGTTTCTATGTGGGAGCAGTGTACTTGTTGAAGTGATAGCAGAACAAGCTGACCTTCTTGAATCTGCTTGCTTTGGTGTTAGAGTGATGGAGAATAAGCACTGGTTTCAGTTGTGTATGGAAGAGGCCTTTTACCTATGCCATTCTCTGAAATGCCTCGAGATAGTTGAAGATAAGTGCCCCAAGAATGAAAACCAGCTATGGAAGTGCATGGAATCCAGAAGAGCATCGTTCCCCTATTTGTACAAGGCTTATTCTCATCTTAGAATGAAAAATTGGGTTGTCAGGTCAGGAGTTAAATATGGTGTGGACTTTGTTGCCTACCGCCATCATCCAGCTCTAGTTCACTCTGAATATGCGGTGATTGTATTGTCAGAGGAACATAGTGATGGAAATAAGCAACTGATGGAGTGGTTAGATATTCATTGTACTACTCGTCTTTGTGGAGGTGTTGCAAAGACATTGTTAGTTCTTTATATCAGCAGAAATGGTCATAGTGTGGACTCCCCATTATGTCTGGAGAGATGTACTGTTGAAGAGCGTACAGTCACAAGATGGAAGCCAGAACAATGCCGTGATGATGATAGATTAGTTGAAAGTGAGAACGGAACCAAATTGAAACAACTTGGTGCCAATATATTCTCCTGCTGTACTCACTTTACTGGCTCAGAACCTCTTGACACAGATGATTCTGAACATATCTTGAATGATGATGAGCTCTCTCTCAACACTATGGCAGAAGATGGAAGGGATGAGGAGGTAGCTGAAAAATTAAAGATTATGCATGAAGAATGTTTAGATGAAGAGTGTACCGATGACTATGATGAAGAAGAAGAAGAAGAAGAAGAGGAAAACCACTATGCTTCTCGTGCCACATCCAAGATGCAACCCAGGAGGTCTAGTGTATCCAAGGCTTACTGGGATGATGAGATGGGCATGGCTGTTGTATTTCCAAAGGGTGGAATTTGGAGGACCATGGGAATCTCTCGTAATGGCAAGCTCTATATCTCCATTGAGGAAGTTTTGTATTTGGTTGAAATAGGGGCTTTGCTTCTCTTGGATGGTAGTGATACTAGTATTTCCTTGGAAGATATATGTACGAAGGTTTCAGATGGAAAGAATGAGTTCTTGTTGGAGGAATTTAGAGCTTATAGGCAACTCAGATACCTTGGTTACATTGTTGCAAGACATGGTATTCCTTGGTCTAGGAAGGGTGTCAAGACAAACTGTGAATCTGTTTCTTCTCAAGTTTGTCCTGAAGCTGAAGAGATTAGGTCTGTCAATGGATTGTTCAATGGGATACAGATTAATGAAGTGAGGGCAGTTTTTGATATTTATCTTCCAAACAGCAAGTTCAAGAAATCCTCTCCCGGTGATCCAAATTTTGTGCTCTGTTTTACTAGGGGCCATCCACCTTCCAAACCAGACCTTGAAGCCCTTGAGAGACAATTTGGTAGCACTGCTTTGAAGTTTTGTCATGTGGAGGAAGATTGTGTGAGTTTCTATTCCTTTGACAAAGTGGAACTTCATGTCGTCTCATGTCATCTGCAAAAATTCAACATCCTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000213 GO:0000214 GO:0000278 GO:0000281 GO:0000379 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016892 GO:0016894 GO:0022402 GO:0022414 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0061640 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:0140101 GO:1901360 GO:1902494 GO:1902555 GO:1903047 GO:1905348

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_int_endo tRNA_int_endo_N

Protein Analysis

565

Amino Acids

64.37

Weight (kDa)

5.33

Isoelectric Point (pI)

58.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_int_endo_N	PF02778	42 - 110	7.9e-09	tRNA intron endonuclease, N-terminal domain
tRNA_int_endo	PF01974	123 - 206	5.5e-18	tRNA intron endonuclease, catalytic C-terminal domain
tRNA_int_end_N2	PF12928	340 - 394	4.6e-14	tRNA-splicing endonuclease subunit sen54 N-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003092)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45577 AT3G45590 AT3G45590 AT5G60230 AT5G60230
fragaria_vesca	FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101 FvH4_2g14101
rosa_chinensis	RchiOBHm_Chr6g0276201
rosa_laevigata	RLG00000013409 RLG00000025847
rosa_multiflora	Rmu_sc0002063.1_g000007 Rmu_sc0004048.1_g000016 Rmu_sc0008839.1_g000006
rosa_roxburghii	Rroxscaffold_2G00125430 Rroxscaffold_7G00192490
rosa_rugosa	Rorug06G0098800 Rorug06G0098900 Rorug06G0098900 Rorug06G0099000 Rorug06G0099100 Rorug06G0099200 Rorug06G0099300 Rorug06G0124300
rosa_samantha	Rh1AG171200 Rh3BG017000 Rh3DG017300 Rh5BG538000 Rh5CG561900 Rh6AG210700 Rh6BG214900 Rh6DG207200
rosa_wichuraiana	Rw6G018360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	755
AccB7I	CCANNNNNTGG	1 cut(s)	1085
AciI	CCGC	2 cut(s)	451, 485
AclWI	GGATC	1 cut(s)	1496
AcsI	RAATTY	4 cut(s)	1089, 1265, 1507, 1679
AcuI	CTGAAG	3 cut(s)	51, 1404, 1410
AfaI	GTAC	8 cut(s)	150, 371, 556, 655, 670, 778, 937, 1225
AfiI	CCNNNNNNNGG	1 cut(s)	1085
AhlI	ACTAGT	1 cut(s)	1199
AjnI	CCWGG	1 cut(s)	1016
AjuI	GAANNNNNNNTTGG	2 cut(s)	385, 417
Alw21I	GWGCWC	2 cut(s)	846, 1518
Alw26I	GTCTC	2 cut(s)	1564, 1666
AlwI	GGATC	1 cut(s)	1496
Ama87I	CYCGRG	2 cut(s)	123, 284
AoxI	GGCC	2 cut(s)	252, 1531
ApeKI	GCWGC	1 cut(s)	91
ApoI	RAATTY	4 cut(s)	1089, 1265, 1507, 1679
AseI	ATTAAT	1 cut(s)	1434
Asp700I	GAANNNNTTC	1 cut(s)	1250
AspA2I	CCTAGG	1 cut(s)	8
AspS9I	GGNCC	3 cut(s)	5, 1098, 1531
AsuC2I	CCSGG	1 cut(s)	1497
AsuHPI	GGTGA	2 cut(s)	499, 1511
AvaI	CYCGRG	2 cut(s)	123, 284
AvaII	GGWCC	2 cut(s)	5, 1098
AvrII	CCTAGG	1 cut(s)	8
BaeGI	GKGCMC	1 cut(s)	308
BaeI	ACNNNNGTAYC	2 cut(s)	1282, 1315
BanI	GGYRCC	1 cut(s)	755
BanII	GRGCYC	1 cut(s)	846
BarI	GAAGNNNNNNTAC	2 cut(s)	78, 110
BauI	CACGAG	1 cut(s)	993
Bbv12I	GWGCWC	2 cut(s)	846, 1518
BbvI	GCAGC	1 cut(s)	103
BceAI	ACGGC	1 cut(s)	684
BciT130I	CCWGG	1 cut(s)	1018
BciVI	GTATCC	2 cut(s)	1042, 1419
BcnI	CCSGG	1 cut(s)	1497
BcoDI	GTCTC	2 cut(s)	1564, 1666
BcuI	ACTAGT	1 cut(s)	1199
BfaI	CTAG	6 cut(s)	9, 467, 1026, 1200, 1332, 1527
BfuI	GTATCC	2 cut(s)	1042, 1419
BisI	GCNGC	1 cut(s)	92
BlnI	CCTAGG	1 cut(s)	8
BlsI	GCNGC	1 cut(s)	93
Bme1390I	CCNGG	2 cut(s)	1018, 1497
Bme18I	GGWCC	2 cut(s)	5, 1098
BmeT110I	CYCGRG	2 cut(s)	123, 284
BmgT120I	GGNCC	3 cut(s)	5, 1098, 1531
BmiI	GGNNCC	4 cut(s)	6, 736, 757, 1532
BmrFI	CCNGG	2 cut(s)	1018, 1497
BmrI	ACTGGG	1 cut(s)	1054
BmsI	GCATC	2 cut(s)	362, 999
BmuI	ACTGGG	1 cut(s)	1054
BpmI	CTGGAG	1 cut(s)	665
BpuEI	CTTGAG	2 cut(s)	1356, 1586
BpuMI	CCSGG	1 cut(s)	1497
BsaBI	GATNNNNATC	1 cut(s)	1461
BsaJI	CCNNGG	7 cut(s)	8, 1016, 1035, 1101, 1209, 1294, 1325
BsaXI	ACNNNNNCTCC	2 cut(s)	1012, 1042
Bsc4I	CCNNNNNNNGG	1 cut(s)	1085
Bse1I	ACTGG	3 cut(s)	233, 793, 1049
Bse8I	GATNNNNATC	1 cut(s)	1461
BseBI	CCWGG	1 cut(s)	1018
BseDI	CCNNGG	7 cut(s)	8, 1016, 1035, 1101, 1209, 1294, 1325
BseGI	GGATG	7 cut(s)	457, 883, 1001, 1054, 1192, 1534, 1686
BseJI	GATNNNNATC	1 cut(s)	1461
BseLI	CCNNNNNNNGG	1 cut(s)	1085
BseMII	CTCAG	2 cut(s)	807, 1300
BseNI	ACTGG	3 cut(s)	233, 793, 1049
BseRI	GAGGAG	1 cut(s)	896
BseSI	GKGCMC	1 cut(s)	308
BseXI	GCAGC	1 cut(s)	103
BshFI	GGCC	2 cut(s)	254, 1533
BshNI	GGYRCC	1 cut(s)	755
BsiHKAI	GWGCWC	2 cut(s)	846, 1518
BsiHKCI	CYCGRG	2 cut(s)	123, 284
BsiSI	CCGG	1 cut(s)	1497
BslFI	GGGAC	1 cut(s)	18
BslI	CCNNNNNNNGG	1 cut(s)	1085
BsmAI	GTCTC	2 cut(s)	1564, 1666
BsmBI	CGTCTC	1 cut(s)	1666
BsmFI	GGGAC	1 cut(s)	18
BsnI	GGCC	2 cut(s)	254, 1533
BsoBI	CYCGRG	2 cut(s)	123, 284
Bsp1286I	GDGCHC	3 cut(s)	308, 846, 1518
Bsp1407I	TGTACA	1 cut(s)	369
Bsp143I	GATC	1 cut(s)	1501
Bsp19I	CCATGG	1 cut(s)	1101
BspACI	CCGC	2 cut(s)	451, 485
BspANI	GGCC	2 cut(s)	254, 1533
BspCNI	CTCAG	2 cut(s)	806, 1299
BspLI	GGNNCC	4 cut(s)	6, 736, 757, 1532
BspPI	GGATC	1 cut(s)	1496
BspQI	GCTCTTC	2 cut(s)	343, 657
BspT107I	GGYRCC	1 cut(s)	755
BsrGI	TGTACA	1 cut(s)	369
BsrI	ACTGG	3 cut(s)	233, 793, 1049
BssECI	CCNNGG	7 cut(s)	8, 1016, 1035, 1101, 1209, 1294, 1325
BssMI	GATC	1 cut(s)	1501
BssSI	CACGAG	1 cut(s)	993
BssT1I	CCWWGG	6 cut(s)	8, 1035, 1101, 1209, 1294, 1325
Bst2BI	CACGAG	1 cut(s)	993
Bst2UI	CCWGG	1 cut(s)	1018
Bst4CI	ACNGT	3 cut(s)	658, 673, 1355
Bst6I	CTCTTC	7 cut(s)	106, 243, 343, 657, 924, 966, 1386
BstAUI	TGTACA	1 cut(s)	369
BstC8I	GCNNGC	2 cut(s)	196, 1124
BstDEI	CTNAG	3 cut(s)	389, 793, 1286
BstDSI	CCRYGG	1 cut(s)	1101
BstF5I	GGATG	7 cut(s)	457, 883, 1001, 1054, 1192, 1534, 1686
BstKTI	GATC	1 cut(s)	1504
BstMAI	GTCTC	2 cut(s)	1564, 1666
BstMBI	GATC	1 cut(s)	1501
BstMWI	GCNNNNNNNGC	2 cut(s)	173, 995
BstNI	CCWGG	1 cut(s)	1018
BstSCI	CCNGG	2 cut(s)	1016, 1495
BstSLI	GKGCMC	1 cut(s)	308
BstV1I	GCAGC	1 cut(s)	103
BsuI	GTATCC	2 cut(s)	1042, 1419
BsuRI	GGCC	2 cut(s)	254, 1533
BtgI	CCRYGG	1 cut(s)	1101
BtsCI	GGATG	7 cut(s)	457, 883, 1001, 1054, 1192, 1534, 1686
BtsI	GCAGTG	2 cut(s)	151, 1584
BtsIMutI	CAGTG	3 cut(s)	151, 226, 1584
Cac8I	GCNNGC	2 cut(s)	196, 1124
Cfr13I	GGNCC	3 cut(s)	5, 1098, 1531
Csp6I	GTAC	8 cut(s)	149, 370, 555, 654, 669, 777, 936, 1224
CviAII	CATG	9 cut(s)	73, 337, 911, 1063, 1102, 1316, 1604, 1655, 1665
CviQI	GTAC	8 cut(s)	149, 370, 555, 654, 669, 777, 936, 1224
DdeI	CTNAG	3 cut(s)	389, 793, 1286
DpnI	GATC	1 cut(s)	1503
DpnII	GATC	1 cut(s)	1501
Eam1104I	CTCTTC	7 cut(s)	106, 243, 343, 657, 924, 966, 1386
EarI	CTCTTC	7 cut(s)	106, 243, 343, 657, 924, 966, 1386
Ecl136II	GAGCTC	1 cut(s)	844
Eco130I	CCWWGG	6 cut(s)	8, 1035, 1101, 1209, 1294, 1325
Eco147I	AGGCCT	1 cut(s)	254
Eco24I	GRGCYC	1 cut(s)	846
Eco47I	GGWCC	2 cut(s)	5, 1098
Eco53kI	GAGCTC	1 cut(s)	844
Eco57I	CTGAAG	3 cut(s)	51, 1404, 1410
Eco88I	CYCGRG	2 cut(s)	123, 284
EcoICRI	GAGCTC	1 cut(s)	844
EcoO109I	RGGNCCY	1 cut(s)	5
EcoRII	CCWGG	1 cut(s)	1016
EcoT14I	CCWWGG	6 cut(s)	8, 1035, 1101, 1209, 1294, 1325
EcoT22I	ATGCAT	1 cut(s)	912
EcoT38I	GRGCYC	1 cut(s)	846
ErhI	CCWWGG	6 cut(s)	8, 1035, 1101, 1209, 1294, 1325
Esp3I	CGTCTC	1 cut(s)	1666
FaeI	CATG	9 cut(s)	76, 340, 914, 1066, 1105, 1319, 1607, 1658, 1668
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 1635, 1667
FaqI	GGGAC	1 cut(s)	18
FatI	CATG	9 cut(s)	72, 336, 910, 1062, 1101, 1315, 1603, 1654, 1664
Fnu4HI	GCNGC	1 cut(s)	92
FokI	GGATG	7 cut(s)	444, 890, 988, 1061, 1199, 1521, 1673
FriOI	GRGCYC	1 cut(s)	846
Fsp4HI	GCNGC	1 cut(s)	92
FspBI	CTAG	6 cut(s)	9, 467, 1026, 1200, 1332, 1527
GluI	GCNGC	1 cut(s)	92
GsuI	CTGGAG	1 cut(s)	665
HaeIII	GGCC	2 cut(s)	254, 1533
HapII	CCGG	1 cut(s)	1497
Hin1II	CATG	9 cut(s)	76, 340, 914, 1066, 1105, 1319, 1607, 1658, 1668
HinfI	GANTC	6 cut(s)	188, 341, 629, 815, 1107, 1358
HpaII	CCGG	1 cut(s)	1497
HphI	GGTGA	2 cut(s)	499, 1511
Hpy166II	GTNNAC	5 cut(s)	149, 436, 472, 628, 936
Hpy188I	TCNGA	9 cut(s)	31, 113, 276, 478, 502, 796, 820, 1237, 1289
Hpy8I	GTNNAC	5 cut(s)	149, 436, 472, 628, 936
HpyAV	CCTTC	5 cut(s)	191, 867, 1222, 1330, 1551
HpyCH4III	ACNGT	3 cut(s)	658, 673, 1355
HpyCH4V	TGCA	8 cut(s)	65, 91, 336, 581, 910, 1012, 1310, 1675
HpyF10VI	GCNNNNNNNGC	2 cut(s)	173, 995
HpyF3I	CTNAG	3 cut(s)	389, 793, 1286
Hsp92II	CATG	9 cut(s)	76, 340, 914, 1066, 1105, 1319, 1607, 1658, 1668
Kzo9I	GATC	1 cut(s)	1501
LguI	GCTCTTC	2 cut(s)	343, 657
LmnI	GCTCC	1 cut(s)	141
Lsp1109I	GCAGC	1 cut(s)	103
LweI	GCATC	2 cut(s)	362, 999
MaeI	CTAG	6 cut(s)	9, 467, 1026, 1200, 1332, 1527
MaeIII	GTNAC	2 cut(s)	673, 1298
MalI	GATC	1 cut(s)	1503
MboI	GATC	1 cut(s)	1501
MhlI	GDGCHC	3 cut(s)	308, 846, 1518
MluCI	AATT	8 cut(s)	400, 740, 896, 1089, 1265, 1507, 1574, 1679
MlyI	GAGTC	1 cut(s)	623
MmeI	TCCRAC	1 cut(s)	1239
Mph1103I	ATGCAT	1 cut(s)	912
MroXI	GAANNNNTTC	1 cut(s)	1250
MseI	TTAA	3 cut(s)	423, 899, 1434
MslI	CAYNNNNRTG	1 cut(s)	513
MspI	CCGG	1 cut(s)	1497
MspR9I	CCNGG	2 cut(s)	1018, 1497
MvaI	CCWGG	1 cut(s)	1018
MwoI	GCNNNNNNNGC	2 cut(s)	173, 995
NciI	CCSGG	1 cut(s)	1497
NcoI	CCATGG	1 cut(s)	1101
NdeII	GATC	1 cut(s)	1501
NlaIII	CATG	9 cut(s)	76, 340, 914, 1066, 1105, 1319, 1607, 1658, 1668
NlaIV	GGNNCC	4 cut(s)	6, 736, 757, 1532
NmuCI	GTSAC	1 cut(s)	673
NsiI	ATGCAT	1 cut(s)	912
PaeR7I	CTCGAG	2 cut(s)	123, 284
PceI	AGGCCT	1 cut(s)	254
PciSI	GCTCTTC	2 cut(s)	343, 657
PdmI	GAANNNNTTC	1 cut(s)	1250
PfeI	GAWTC	5 cut(s)	188, 341, 815, 1107, 1358
PflMI	CCANNNNNTGG	1 cut(s)	1085
PkrI	GCNGC	1 cut(s)	93
PleI	GAGTC	1 cut(s)	623
PpsI	GAGTC	1 cut(s)	623
PpuMI	RGGWCCY	1 cut(s)	5
PshBI	ATTAAT	1 cut(s)	1434
Psp124BI	GAGCTC	1 cut(s)	846
Psp5II	RGGWCCY	1 cut(s)	5
Psp6I	CCWGG	1 cut(s)	1016
PspGI	CCWGG	1 cut(s)	1016
PspN4I	GGNNCC	4 cut(s)	6, 736, 757, 1532
PspPI	GGNCC	3 cut(s)	5, 1098, 1531
PspPPI	RGGWCCY	1 cut(s)	5
RsaI	GTAC	8 cut(s)	150, 371, 556, 655, 670, 778, 937, 1225
RsaNI	GTAC	8 cut(s)	149, 370, 555, 654, 669, 777, 936, 1224
RseI	CAYNNNNRTG	1 cut(s)	513
SacI	GAGCTC	1 cut(s)	846
SapI	GCTCTTC	2 cut(s)	343, 657
SaqAI	TTAA	3 cut(s)	423, 899, 1434
SatI	GCNGC	1 cut(s)	92
Sau3AI	GATC	1 cut(s)	1501
Sau96I	GGNCC	3 cut(s)	5, 1098, 1531
SchI	GAGTC	1 cut(s)	623
ScrFI	CCNGG	2 cut(s)	1018, 1497
SduI	GDGCHC	3 cut(s)	308, 846, 1518
SfaNI	GCATC	2 cut(s)	362, 999
Sfr274I	CTCGAG	2 cut(s)	123, 284
SinI	GGWCC	2 cut(s)	5, 1098
SlaI	CTCGAG	2 cut(s)	123, 284
SmiMI	CAYNNNNRTG	1 cut(s)	513
SmlI	CTYRAG	4 cut(s)	123, 284, 1371, 1565
SmoI	CTYRAG	4 cut(s)	123, 284, 1371, 1565
SpeI	ACTAGT	1 cut(s)	1199
Sse9I	AATT	8 cut(s)	400, 740, 896, 1089, 1265, 1507, 1574, 1679
SseBI	AGGCCT	1 cut(s)	254
SsiI	CCGC	2 cut(s)	451, 485
SspMI	CTAG	6 cut(s)	9, 467, 1026, 1200, 1332, 1527
SstI	GAGCTC	1 cut(s)	846
StuI	AGGCCT	1 cut(s)	254
StyD4I	CCNGG	2 cut(s)	1016, 1495
StyI	CCWWGG	6 cut(s)	8, 1035, 1101, 1209, 1294, 1325
TaaI	ACNGT	3 cut(s)	658, 673, 1355
TaqI	TCGA	2 cut(s)	124, 285
TaqII	GACCGA	1 cut(s)	33
TasI	AATT	8 cut(s)	400, 740, 896, 1089, 1265, 1507, 1574, 1679
TatI	WGTACW	5 cut(s)	148, 369, 554, 653, 776
TfiI	GAWTC	5 cut(s)	188, 341, 815, 1107, 1358
Tru1I	TTAA	3 cut(s)	423, 899, 1434
Tru9I	TTAA	3 cut(s)	423, 899, 1434
TscAI	CASTG	3 cut(s)	151, 233, 1591
TseFI	GTSAC	1 cut(s)	673
TseI	GCWGC	1 cut(s)	91
Tsp45I	GTSAC	1 cut(s)	673
TspDTI	ATGAA	8 cut(s)	330, 410, 539, 927, 942, 966, 1452, 1643
TspGWI	ACGGA	1 cut(s)	747
TspRI	CASTG	3 cut(s)	151, 233, 1591
Van91I	CCANNNNNTGG	1 cut(s)	1085
VpaK11BI	GGWCC	2 cut(s)	5, 1098
VspI	ATTAAT	1 cut(s)	1434
XapI	RAATTY	4 cut(s)	1089, 1265, 1507, 1679
XhoI	CTCGAG	2 cut(s)	123, 284
XmaJI	CCTAGG	1 cut(s)	8
XmnI	GAANNNNTTC	1 cut(s)	1250
XspI	CTAG	6 cut(s)	9, 467, 1026, 1200, 1332, 1527
Zsp2I	ATGCAT	1 cut(s)	912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.