pumilio homolog
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g30780 FvH4_5g30780 |
| malus_domestica | MD05G1093500.v1.1 |
| prunus_persica | Prupe.8G138200_v2.0.a1 Prupe.8G138200_v2.0.a1 |
| pyrus_communis | pycom15g06920 |
| rosa_chinensis | RchiOBHm_Chr6g0254321 RchiOBHm_Chr6g0254351 |
| rosa_laevigata | RLG00000014133 RLG00000014918 RLG00000014919 RLG00000014923 RLG00000014926 |
| rosa_multiflora | Rmu_sc0006565.1_g000002 Rmu_sc0007138.1_g000009 Rmu_sc0027609.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00210870 Rroxscaffold_7G00210910 Rroxscaffold_7G00210930 |
| rosa_rugosa | Rorug05G0552000 |
| rosa_samantha | Rh6AG068500 Rh6AG068800 Rh6AG068900 Rh6BG061200 Rh6CG061000 Rh6CG061100 Rh6CG061500 Rh6DG058000 Rh6DG058300 Rh6DG058400 Rh6DG058700 |
| rosa_wichuraiana | Rw6G006000 Rw6G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1072 |
| AccI | GTMKAC | 1 cut(s) | 1298 |
| AccII | CGCG | 1 cut(s) | 903 |
| AciI | CCGC | 4 cut(s) | 727, 1072, 1108, 1133 |
| AclWI | GGATC | 5 cut(s) | 5, 18, 552, 1355, 1639 |
| AcoI | YGGCCR | 1 cut(s) | 789 |
| AcsI | RAATTY | 4 cut(s) | 679, 932, 1183, 1256 |
| AcuI | CTGAAG | 4 cut(s) | 1136, 1323, 1377, 1424 |
| AfaI | GTAC | 3 cut(s) | 373, 434, 1388 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 489, 1507 |
| AgsI | TTSAA | 8 cut(s) | 38, 274, 403, 857, 1079, 1169, 1180, 1580 |
| AhlI | ACTAGT | 2 cut(s) | 506, 524 |
| AjnI | CCWGG | 1 cut(s) | 1150 |
| AluBI | AGCT | 5 cut(s) | 266, 342, 907, 1307, 1438 |
| AluI | AGCT | 5 cut(s) | 266, 342, 907, 1307, 1438 |
| Alw21I | GWGCWC | 2 cut(s) | 524, 1713 |
| AlwI | GGATC | 5 cut(s) | 5, 18, 552, 1355, 1639 |
| Ama87I | CYCGRG | 2 cut(s) | 1083, 1344 |
| AoxI | GGCC | 3 cut(s) | 673, 772, 789 |
| ApeKI | GCWGC | 1 cut(s) | 236 |
| ApoI | RAATTY | 4 cut(s) | 679, 932, 1183, 1256 |
| AseI | ATTAAT | 1 cut(s) | 1551 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 936, 1184 |
| AspLEI | GCGC | 1 cut(s) | 903 |
| AspS9I | GGNCC | 3 cut(s) | 221, 772, 975 |
| AsuC2I | CCSGG | 1 cut(s) | 111 |
| AsuHPI | GGTGA | 1 cut(s) | 1006 |
| AsuII | TTCGAA | 1 cut(s) | 446 |
| AvaI | CYCGRG | 2 cut(s) | 1083, 1344 |
| AvaII | GGWCC | 2 cut(s) | 221, 975 |
| BalI | TGGCCA | 1 cut(s) | 791 |
| BamHI | GGATCC | 1 cut(s) | 10 |
| BbsI | GAAGAC | 1 cut(s) | 646 |
| Bbv12I | GWGCWC | 2 cut(s) | 524, 1713 |
| BbvI | GCAGC | 1 cut(s) | 223 |
| BccI | CCATC | 4 cut(s) | 78, 838, 966, 1698 |
| BceAI | ACGGC | 1 cut(s) | 740 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1028, 1062 |
| BciT130I | CCWGG | 1 cut(s) | 1152 |
| BciVI | GTATCC | 1 cut(s) | 1633 |
| BclI | TGATCA | 3 cut(s) | 94, 241, 892 |
| BcnI | CCSGG | 1 cut(s) | 111 |
| BcuI | ACTAGT | 2 cut(s) | 506, 524 |
| BfaI | CTAG | 8 cut(s) | 339, 353, 377, 507, 525, 579, 585, 1226 |
| BfuI | GTATCC | 1 cut(s) | 1633 |
| BisI | GCNGC | 2 cut(s) | 237, 728 |
| BlpI | GCTNAGC | 3 cut(s) | 281, 426, 1136 |
| BlsI | GCNGC | 2 cut(s) | 238, 729 |
| BmcAI | AGTACT | 1 cut(s) | 373 |
| Bme1390I | CCNGG | 2 cut(s) | 111, 1152 |
| Bme18I | GGWCC | 2 cut(s) | 221, 975 |
| BmeT110I | CYCGRG | 2 cut(s) | 1083, 1344 |
| BmgT120I | GGNCC | 3 cut(s) | 221, 772, 975 |
| BmiI | GGNNCC | 3 cut(s) | 12, 668, 773 |
| BmrFI | CCNGG | 2 cut(s) | 111, 1152 |
| BpiI | GAAGAC | 1 cut(s) | 646 |
| BpmI | CTGGAG | 2 cut(s) | 1088, 1533 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1308 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 281, 426, 1136 |
| Bpu14I | TTCGAA | 1 cut(s) | 446 |
| BpuEI | CTTGAG | 1 cut(s) | 1001 |
| BpuMI | CCSGG | 1 cut(s) | 111 |
| Bsa29I | ATCGAT | 1 cut(s) | 533 |
| BsaJI | CCNNGG | 3 cut(s) | 670, 1203, 1626 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 511, 541 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 489, 1507 |
| Bse3DI | GCAATG | 2 cut(s) | 364, 718 |
| BseBI | CCWGG | 1 cut(s) | 1152 |
| BseCI | ATCGAT | 1 cut(s) | 533 |
| BseDI | CCNNGG | 3 cut(s) | 670, 1203, 1626 |
| BseGI | GGATG | 2 cut(s) | 812, 977 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 489, 1507 |
| BseMI | GCAATG | 2 cut(s) | 364, 718 |
| BseMII | CTCAG | 7 cut(s) | 272, 417, 605, 1127, 1326, 1551, 1619 |
| BseRI | GAGGAG | 2 cut(s) | 848, 1740 |
| BseXI | GCAGC | 1 cut(s) | 223 |
| BseYI | CCCAGC | 1 cut(s) | 1146 |
| BsgI | GTGCAG | 4 cut(s) | 705, 1183, 1403, 1667 |
| Bsh1236I | CGCG | 1 cut(s) | 903 |
| BshFI | GGCC | 3 cut(s) | 675, 774, 791 |
| BshVI | ATCGAT | 1 cut(s) | 533 |
| BsiHKAI | GWGCWC | 2 cut(s) | 524, 1713 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1083, 1344 |
| BsiSI | CCGG | 1 cut(s) | 111 |
| BslFI | GGGAC | 4 cut(s) | 737, 940, 970, 980 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 489, 1507 |
| BsmFI | GGGAC | 4 cut(s) | 737, 940, 970, 980 |
| BsnI | GGCC | 3 cut(s) | 675, 774, 791 |
| BsoBI | CYCGRG | 2 cut(s) | 1083, 1344 |
| Bsp119I | TTCGAA | 1 cut(s) | 446 |
| Bsp1286I | GDGCHC | 2 cut(s) | 524, 1713 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 281, 426, 1136 |
| BspACI | CCGC | 4 cut(s) | 727, 1072, 1108, 1133 |
| BspANI | GGCC | 3 cut(s) | 675, 774, 791 |
| BspCNI | CTCAG | 7 cut(s) | 273, 418, 604, 1128, 1327, 1552, 1618 |
| BspDI | ATCGAT | 1 cut(s) | 533 |
| BspFNI | CGCG | 1 cut(s) | 903 |
| BspHI | TCATGA | 2 cut(s) | 226, 889 |
| BspLI | GGNNCC | 3 cut(s) | 12, 668, 773 |
| BspPI | GGATC | 5 cut(s) | 5, 18, 552, 1355, 1639 |
| BspT104I | TTCGAA | 1 cut(s) | 446 |
| BsrBI | CCGCTC | 1 cut(s) | 1072 |
| BsrDI | GCAATG | 2 cut(s) | 364, 718 |
| BssECI | CCNNGG | 3 cut(s) | 670, 1203, 1626 |
| BssNAI | GTATAC | 1 cut(s) | 1299 |
| BssT1I | CCWWGG | 3 cut(s) | 670, 1203, 1626 |
| Bst1107I | GTATAC | 1 cut(s) | 1299 |
| Bst2UI | CCWGG | 1 cut(s) | 1152 |
| Bst4CI | ACNGT | 4 cut(s) | 119, 163, 467, 1095 |
| Bst6I | CTCTTC | 2 cut(s) | 756, 843 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1063 |
| BstBI | TTCGAA | 1 cut(s) | 446 |
| BstC8I | GCNNGC | 3 cut(s) | 905, 1341, 1733 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1505 |
| BstF5I | GGATG | 2 cut(s) | 812, 977 |
| BstFNI | CGCG | 1 cut(s) | 903 |
| BstHHI | GCGC | 1 cut(s) | 903 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 306, 632, 652, 1063, 1610 |
| BstNI | CCWGG | 1 cut(s) | 1152 |
| BstNSI | RCATGY | 2 cut(s) | 1343, 1526 |
| BstSCI | CCNGG | 2 cut(s) | 109, 1150 |
| BstUI | CGCG | 1 cut(s) | 903 |
| BstV1I | GCAGC | 1 cut(s) | 223 |
| BstV2I | GAAGAC | 1 cut(s) | 646 |
| BstX2I | RGATCY | 3 cut(s) | 10, 1360, 1631 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1697 |
| BstYI | RGATCY | 3 cut(s) | 10, 1360, 1631 |
| BstZ17I | GTATAC | 1 cut(s) | 1299 |
| Bsu15I | ATCGAT | 1 cut(s) | 533 |
| BsuI | GTATCC | 1 cut(s) | 1633 |
| BsuRI | GGCC | 3 cut(s) | 675, 774, 791 |
| BsuTUI | ATCGAT | 1 cut(s) | 533 |
| BtsCI | GGATG | 2 cut(s) | 812, 977 |
| BtsI | GCAGTG | 1 cut(s) | 1288 |
| BtsIMutI | CAGTG | 4 cut(s) | 168, 472, 1029, 1288 |
| Cac8I | GCNNGC | 3 cut(s) | 905, 1341, 1733 |
| CciI | TCATGA | 2 cut(s) | 226, 889 |
| CfoI | GCGC | 1 cut(s) | 903 |
| Cfr13I | GGNCC | 3 cut(s) | 221, 772, 975 |
| ClaI | ATCGAT | 1 cut(s) | 533 |
| CseI | GACGC | 1 cut(s) | 1304 |
| Csp6I | GTAC | 3 cut(s) | 372, 433, 1387 |
| CviQI | GTAC | 3 cut(s) | 372, 433, 1387 |
| EaeI | YGGCCR | 1 cut(s) | 789 |
| Eam1104I | CTCTTC | 2 cut(s) | 756, 843 |
| EarI | CTCTTC | 2 cut(s) | 756, 843 |
| Eco130I | CCWWGG | 3 cut(s) | 670, 1203, 1626 |
| Eco147I | AGGCCT | 1 cut(s) | 675 |
| Eco47I | GGWCC | 2 cut(s) | 221, 975 |
| Eco57I | CTGAAG | 4 cut(s) | 1136, 1323, 1377, 1424 |
| Eco88I | CYCGRG | 2 cut(s) | 1083, 1344 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1505 |
| EcoO109I | RGGNCCY | 1 cut(s) | 221 |
| EcoRII | CCWGG | 1 cut(s) | 1150 |
| EcoT14I | CCWWGG | 3 cut(s) | 670, 1203, 1626 |
| ErhI | CCWWGG | 3 cut(s) | 670, 1203, 1626 |
| FaqI | GGGAC | 4 cut(s) | 737, 940, 970, 980 |
| FauI | CCCGC | 2 cut(s) | 1065, 1101 |
| FbaI | TGATCA | 3 cut(s) | 94, 241, 892 |
| FblI | GTMKAC | 1 cut(s) | 1298 |
| Fnu4HI | GCNGC | 2 cut(s) | 237, 728 |
| FokI | GGATG | 2 cut(s) | 819, 984 |
| Fsp4HI | GCNGC | 2 cut(s) | 237, 728 |
| FspBI | CTAG | 8 cut(s) | 339, 353, 377, 507, 525, 579, 585, 1226 |
| GlaI | GCGC | 1 cut(s) | 902 |
| GluI | GCNGC | 2 cut(s) | 237, 728 |
| GsaI | CCCAGC | 1 cut(s) | 1150 |
| GsuI | CTGGAG | 2 cut(s) | 1088, 1533 |
| HaeIII | GGCC | 3 cut(s) | 675, 774, 791 |
| HapII | CCGG | 1 cut(s) | 111 |
| HgaI | GACGC | 1 cut(s) | 1304 |
| HhaI | GCGC | 1 cut(s) | 903 |
| Hin6I | GCGC | 1 cut(s) | 901 |
| HinP1I | GCGC | 1 cut(s) | 901 |
| HincII | GTYRAC | 1 cut(s) | 1654 |
| HindII | GTYRAC | 1 cut(s) | 1654 |
| HinfI | GANTC | 7 cut(s) | 247, 274, 448, 493, 1122, 1165, 1347 |
| HpaI | GTTAAC | 1 cut(s) | 1654 |
| HpaII | CCGG | 1 cut(s) | 111 |
| HphI | GGTGA | 1 cut(s) | 1006 |
| Hpy166II | GTNNAC | 4 cut(s) | 690, 1299, 1639, 1654 |
| Hpy188I | TCNGA | 8 cut(s) | 10, 246, 498, 942, 1116, 1357, 1569, 1665 |
| Hpy188III | TCNNGA | 7 cut(s) | 227, 377, 890, 1193, 1214, 1492, 1559 |
| Hpy8I | GTNNAC | 4 cut(s) | 690, 1299, 1639, 1654 |
| HpyAV | CCTTC | 1 cut(s) | 1419 |
| HpyCH4III | ACNGT | 4 cut(s) | 119, 163, 467, 1095 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 306, 632, 652, 1063, 1610 |
| HspAI | GCGC | 1 cut(s) | 901 |
| Ksp22I | TGATCA | 3 cut(s) | 94, 241, 892 |
| KspAI | GTTAAC | 1 cut(s) | 1654 |
| LmnI | GCTCC | 5 cut(s) | 519, 666, 1069, 1312, 1665 |
| Lsp1109I | GCAGC | 1 cut(s) | 223 |
| MaeI | CTAG | 8 cut(s) | 339, 353, 377, 507, 525, 579, 585, 1226 |
| MaeIII | GTNAC | 1 cut(s) | 1414 |
| MbiI | CCGCTC | 1 cut(s) | 1072 |
| MflI | RGATCY | 3 cut(s) | 10, 1360, 1631 |
| MhlI | GDGCHC | 2 cut(s) | 524, 1713 |
| MlsI | TGGCCA | 1 cut(s) | 791 |
| MluNI | TGGCCA | 1 cut(s) | 791 |
| MlyI | GAGTC | 2 cut(s) | 241, 1356 |
| MmeI | TCCRAC | 2 cut(s) | 470, 784 |
| Mox20I | TGGCCA | 1 cut(s) | 791 |
| MroXI | GAANNNNTTC | 2 cut(s) | 936, 1184 |
| MscI | TGGCCA | 1 cut(s) | 791 |
| MseI | TTAA | 7 cut(s) | 171, 564, 867, 1455, 1539, 1551, 1653 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1695 |
| Msp20I | TGGCCA | 1 cut(s) | 791 |
| MspA1I | CMGCKG | 1 cut(s) | 1135 |
| MspI | CCGG | 1 cut(s) | 111 |
| MspR9I | CCNGG | 2 cut(s) | 111, 1152 |
| MvaI | CCWGG | 1 cut(s) | 1152 |
| MvnI | CGCG | 1 cut(s) | 903 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 306, 632, 652, 1063, 1610 |
| NciI | CCSGG | 1 cut(s) | 111 |
| NlaIV | GGNNCC | 3 cut(s) | 12, 668, 773 |
| NspI | RCATGY | 2 cut(s) | 1343, 1526 |
| NspV | TTCGAA | 1 cut(s) | 446 |
| PaeI | GCATGC | 1 cut(s) | 1343 |
| PaeR7I | CTCGAG | 1 cut(s) | 1344 |
| PagI | TCATGA | 2 cut(s) | 226, 889 |
| PceI | AGGCCT | 1 cut(s) | 675 |
| PdmI | GAANNNNTTC | 2 cut(s) | 936, 1184 |
| PfeI | GAWTC | 5 cut(s) | 274, 448, 493, 1122, 1165 |
| PfoI | TCCNGGA | 1 cut(s) | 109 |
| PkrI | GCNGC | 2 cut(s) | 238, 729 |
| PleI | GAGTC | 2 cut(s) | 241, 1355 |
| PpsI | GAGTC | 2 cut(s) | 241, 1355 |
| PpuMI | RGGWCCY | 1 cut(s) | 221 |
| PshBI | ATTAAT | 1 cut(s) | 1551 |
| Psp5II | RGGWCCY | 1 cut(s) | 221 |
| Psp6I | CCWGG | 1 cut(s) | 1150 |
| PspFI | CCCAGC | 1 cut(s) | 1146 |
| PspGI | CCWGG | 1 cut(s) | 1150 |
| PspN4I | GGNNCC | 3 cut(s) | 12, 668, 773 |
| PspPI | GGNCC | 3 cut(s) | 221, 772, 975 |
| PspPPI | RGGWCCY | 1 cut(s) | 221 |
| PspXI | VCTCGAGB | 1 cut(s) | 1344 |
| PsuI | RGATCY | 3 cut(s) | 10, 1360, 1631 |
| RsaI | GTAC | 3 cut(s) | 373, 434, 1388 |
| RsaNI | GTAC | 3 cut(s) | 372, 433, 1387 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1695 |
| SaqAI | TTAA | 7 cut(s) | 171, 564, 867, 1455, 1539, 1551, 1653 |
| SatI | GCNGC | 2 cut(s) | 237, 728 |
| Sau96I | GGNCC | 3 cut(s) | 221, 772, 975 |
| ScaI | AGTACT | 1 cut(s) | 373 |
| SchI | GAGTC | 2 cut(s) | 241, 1356 |
| ScrFI | CCNGG | 2 cut(s) | 111, 1152 |
| SduI | GDGCHC | 2 cut(s) | 524, 1713 |
| Sfr274I | CTCGAG | 1 cut(s) | 1344 |
| SfuI | TTCGAA | 1 cut(s) | 446 |
| SinI | GGWCC | 2 cut(s) | 221, 975 |
| SlaI | CTCGAG | 1 cut(s) | 1344 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1695 |
| SmlI | CTYRAG | 2 cut(s) | 1016, 1344 |
| SmoI | CTYRAG | 2 cut(s) | 1016, 1344 |
| SpeI | ACTAGT | 2 cut(s) | 506, 524 |
| SphI | GCATGC | 1 cut(s) | 1343 |
| SseBI | AGGCCT | 1 cut(s) | 675 |
| SsiI | CCGC | 4 cut(s) | 727, 1072, 1108, 1133 |
| SspI | AATATT | 1 cut(s) | 389 |
| SspMI | CTAG | 8 cut(s) | 339, 353, 377, 507, 525, 579, 585, 1226 |
| StuI | AGGCCT | 1 cut(s) | 675 |
| StyD4I | CCNGG | 2 cut(s) | 109, 1150 |
| StyI | CCWWGG | 3 cut(s) | 670, 1203, 1626 |
| TaaI | ACNGT | 4 cut(s) | 119, 163, 467, 1095 |
| TaqI | TCGA | 8 cut(s) | 158, 191, 446, 533, 811, 1345, 1491, 1713 |
| TatI | WGTACW | 3 cut(s) | 371, 432, 1386 |
| TauI | GCSGC | 1 cut(s) | 730 |
| TfiI | GAWTC | 5 cut(s) | 274, 448, 493, 1122, 1165 |
| Tru1I | TTAA | 7 cut(s) | 171, 564, 867, 1455, 1539, 1551, 1653 |
| Tru9I | TTAA | 7 cut(s) | 171, 564, 867, 1455, 1539, 1551, 1653 |
| TscAI | CASTG | 4 cut(s) | 168, 472, 1036, 1288 |
| TseI | GCWGC | 1 cut(s) | 236 |
| TspDTI | ATGAA | 2 cut(s) | 893, 1481 |
| TspGWI | ACGGA | 1 cut(s) | 984 |
| TspRI | CASTG | 4 cut(s) | 168, 472, 1036, 1288 |
| VpaK11BI | GGWCC | 2 cut(s) | 221, 975 |
| VspI | ATTAAT | 1 cut(s) | 1551 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1505 |
| XapI | RAATTY | 4 cut(s) | 679, 932, 1183, 1256 |
| XbaI | TCTAGA | 1 cut(s) | 376 |
| XceI | RCATGY | 2 cut(s) | 1343, 1526 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1210 |
| XhoI | CTCGAG | 1 cut(s) | 1344 |
| XmiI | GTMKAC | 1 cut(s) | 1298 |
| XmnI | GAANNNNTTC | 2 cut(s) | 936, 1184 |
| XspI | CTAG | 8 cut(s) | 339, 353, 377, 507, 525, 579, 585, 1226 |
| ZrmI | AGTACT | 1 cut(s) | 373 |