Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004233

Physical Location & Seq

Genomic Coordinates Reverse (-)

5978218 .. 5982821

Gene Structure 4604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG058000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGTATTGGGATCCCATGTTGCCCAATCTCGTTCTTCAAAACCCACCAATCTTGCAAAACCCTCCCTACCATCAAAACACTAATCCCAACTTTGATCATCTTCTTTTTCCAGGAAACAGTACCAACAATCTTATCAACAACAATAATAATGGGTTTTCGACAGTGGGATTTAACAGTAACAATGGGTTTTCGACATTGGGATTTGGAACAGGTGGGGGAGGTCCTCAAGATTTTGCTGCTGATCAGACTCATGATCAACTCGCAGCTTCTTTGAATCAGCTGAGCATATCCAATAATGGCAGTTCAGGCAATTTTGCTGCTGATCAGACTCATGATCAACTCGCAGCTTCTTTGAATCAGCTGAGCATATCCAATAATGGCAGTTCAGGCAATCAAAGAATACCCAACAACTATATGCCTAGCTCTACAATCCTAGGCAATGGTGGATTAAGTACTCTAGAGCAGGAATATTTGGAGAGGTTGAACCAATATGCTTTCTTAATGGCTGAGCAGTACGTGAGGCGTTCGAATCCCACTACTGCTAACAATGGAATACTCAATCCCCATAGTGGGAATCGGAATAGCACCAGTAGTAGTAGCAGGAGCACTTGTCAATCGATTTATGGGGATCCATTTGGATTTGGTTTTAACCACATTAGGTCTAGTTCTAGTTCTCAGCGGAATGGGGTTAGCAGGGGATCAAGGTTTGCTAATGGAAGACAGCGTTTCGGGCAAGAAGAAAGGAGCCAAGGCCTGAATTTGATGTCCACCAAAGATCAAAGGCTTGGCAATGGTTCTGCACGGCAGCATATACCAAGTTATTACTCTGTCCCTTTGGAAGAGTTGAGGGGCCAAATTGCTTTTGTGGCCAAAGATCATGTTGGATGTCGATTTTTACAAAAGAAGATTGAGGAGGGTAAGATGGAAGAGATTGGAATGATTTTTAATGAGGTTATGAAGGAGGGTCATGATCATTTGCGCGAGCTAATGGTAGATCAATTTGGGACTGAATTTATTCAGAAACTTGTGGAGGGGACTAACAGGGACGGATGGACCAAAATGCTTGATTTAGTGATGAGTGATGAGAGGAAACTCAAGGATATGTGCACTGACCAGCATGGAAGTCGTGCCATGCAGAAGTTGCTGGAGCGGGTTGAAACCCGAGAGCAACAGTCCTCGTTTATGCGGGTTCTGAAGCGAATCACAATTCCGCTGAGCAAAACCCAACCTGGTTATTATGTGATTCAAGTTTGCTTGAAAAATTTCTCTCCTGACTGCACCAAGGGTGTTCTGGAATTAGTGCTAGATAACTGCCTCGTATTAGCAAAAGACAAATTTGGGTGTTGCTTAGTGCAAAGCAGTGTGCATTATGCGTATACTGAAGCTAAGGAGCGTCTTGTGGCTGACATAACTGATCATGCTCGAGTCCTCTCTGAAGATCCTTACGGGAACTATGTTGTGCAGTACATAATTGGATTAAAAATACCTCGTGTAACAACAGACATTTTAGGTCAGCTTCAGGGGTATTTTGTTAATCTGTCGATGAACAAGCATGGAAGTAATGTAATCGAGAAAACCCTGAAAGAGGCTGGAGAAGAACATGTCAATATGATTATTAACGAGATGATTAACAGTCCTGAGTTTCTGAATGTTCTTCAAAATCCTTATGGGAATTATGTTGCTCAGTCTGCTCTTGCAGTATCCAAGGGATCTGTTCACAATGCTCTTGTTAACCTCATTCGGAGCAATTACCCTCATCTGCACAGCCATCTGTATGGGAAAAGGGTGCTCGACAAAACCAGAGGAGGCAGGCATCGTGCATTAGCAAGCAAAGCAGCATGTAAACTATATATAAATGTAGTTCAAAATCAGCTGCAGGAAGGTCTAACAGCTCTTAGCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF zf-CCCH

Protein Analysis

634

Amino Acids

70.59

Weight (kDa)

8.24

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF	PF00806	288 - 319	6.6e-07	Pumilio-family RNA binding repeat
PUF	PF00806	509 - 543	9.7e-09	Pumilio-family RNA binding repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004233)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g30780 FvH4_5g30780
malus_domestica	MD05G1093500.v1.1
prunus_persica	Prupe.8G138200_v2.0.a1 Prupe.8G138200_v2.0.a1
pyrus_communis	pycom15g06920
rosa_chinensis	RchiOBHm_Chr6g0254321 RchiOBHm_Chr6g0254351
rosa_laevigata	RLG00000014133 RLG00000014918 RLG00000014919 RLG00000014923 RLG00000014926
rosa_multiflora	Rmu_sc0006565.1_g000002 Rmu_sc0007138.1_g000009 Rmu_sc0027609.1_g000002
rosa_roxburghii	Rroxscaffold_7G00210870 Rroxscaffold_7G00210910 Rroxscaffold_7G00210930
rosa_rugosa	Rorug05G0552000
rosa_samantha	Rh6AG068500 Rh6AG068800 Rh6AG068900 Rh6BG061200 Rh6CG061000 Rh6CG061100 Rh6CG061500 Rh6DG058000 Rh6DG058300 Rh6DG058400 Rh6DG058700
rosa_wichuraiana	Rw6G006000 Rw6G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1150
AccI	GTMKAC	1 cut(s)	1376
AccII	CGCG	1 cut(s)	981
AciI	CCGC	4 cut(s)	679, 1150, 1186, 1211
AclWI	GGATC	7 cut(s)	5, 18, 623, 636, 706, 1433, 1717
AcoI	YGGCCR	1 cut(s)	867
AcsI	RAATTY	4 cut(s)	757, 1010, 1261, 1334
AcuI	CTGAAG	4 cut(s)	1214, 1401, 1455, 1502
AfaI	GTAC	4 cut(s)	121, 454, 515, 1466
AfiI	CCNNNNNNNGG	3 cut(s)	569, 570, 1585
AflIII	ACRYGT	1 cut(s)	1600
AgsI	TTSAA	9 cut(s)	38, 274, 355, 484, 1157, 1247, 1258, 1658, 1865
AjnI	CCWGG	2 cut(s)	109, 1228
Alw21I	GWGCWC	3 cut(s)	608, 1109, 1791
Alw44I	GTGCAC	1 cut(s)	1105
AlwI	GGATC	7 cut(s)	5, 18, 623, 636, 706, 1433, 1717
Ama87I	CYCGRG	2 cut(s)	1161, 1422
AoxI	GGCC	3 cut(s)	751, 850, 867
ApaLI	GTGCAC	1 cut(s)	1105
ApeKI	GCWGC	7 cut(s)	236, 263, 317, 344, 805, 1835, 1873
ApoI	RAATTY	4 cut(s)	757, 1010, 1261, 1334
Asp700I	GAANNNNTTC	2 cut(s)	1014, 1262
AspA2I	CCTAGG	1 cut(s)	433
AspLEI	GCGC	1 cut(s)	981
AspS9I	GGNCC	3 cut(s)	221, 850, 1053
AsuII	TTCGAA	1 cut(s)	527
AvaI	CYCGRG	2 cut(s)	1161, 1422
AvaII	GGWCC	2 cut(s)	221, 1053
AvrII	CCTAGG	1 cut(s)	433
BaeGI	GKGCMC	1 cut(s)	1109
BalI	TGGCCA	1 cut(s)	869
BamHI	GGATCC	2 cut(s)	10, 628
BauI	CACGAG	1 cut(s)	1488
BbsI	GAAGAC	1 cut(s)	724
Bbv12I	GWGCWC	3 cut(s)	608, 1109, 1791
BbvI	GCAGC	7 cut(s)	223, 275, 304, 356, 817, 1847, 1860
BccI	CCATC	4 cut(s)	78, 916, 1044, 1776
BceAI	ACGGC	1 cut(s)	818
BcgI	CGANNNNNNTGC	2 cut(s)	1106, 1140
BciT130I	CCWGG	2 cut(s)	111, 1230
BciVI	GTATCC	1 cut(s)	1711
BclI	TGATCA	7 cut(s)	94, 241, 253, 322, 334, 970, 1414
BfaI	CTAG	7 cut(s)	420, 434, 458, 663, 669, 1304, 1903
BfmI	CTRYAG	1 cut(s)	1874
BfuI	GTATCC	1 cut(s)	1711
BisI	GCNGC	7 cut(s)	237, 264, 318, 345, 806, 1836, 1874
BlnI	CCTAGG	1 cut(s)	433
BlpI	GCTNAGC	4 cut(s)	281, 362, 507, 1214
BlsI	GCNGC	7 cut(s)	238, 265, 319, 346, 807, 1837, 1875
BmcAI	AGTACT	1 cut(s)	454
Bme1390I	CCNGG	2 cut(s)	111, 1230
Bme18I	GGWCC	2 cut(s)	221, 1053
BmeT110I	CYCGRG	2 cut(s)	1161, 1422
BmgT120I	GGNCC	3 cut(s)	221, 850, 1053
BmiI	GGNNCC	4 cut(s)	12, 630, 746, 851
BmrFI	CCNGG	2 cut(s)	111, 1230
BmsI	GCATC	1 cut(s)	1822
BpiI	GAAGAC	1 cut(s)	724
BpmI	CTGGAG	2 cut(s)	1166, 1611
Bpu10I	CCTNAGC	1 cut(s)	1386
Bpu1102I	GCTNAGC	4 cut(s)	281, 362, 507, 1214
Bpu14I	TTCGAA	1 cut(s)	527
BpuEI	CTTGAG	2 cut(s)	210, 1079
Bsa29I	ATCGAT	1 cut(s)	617
BsaAI	YACGTR	1 cut(s)	517
BsaJI	CCNNGG	4 cut(s)	433, 748, 1281, 1704
BsaXI	ACNNNNNCTCC	2 cut(s)	595, 625
Bsc4I	CCNNNNNNNGG	3 cut(s)	569, 570, 1585
Bse1I	ACTGG	1 cut(s)	588
Bse3DI	GCAATG	2 cut(s)	445, 796
BseBI	CCWGG	2 cut(s)	111, 1230
BseCI	ATCGAT	1 cut(s)	617
BseDI	CCNNGG	4 cut(s)	433, 748, 1281, 1704
BseGI	GGATG	2 cut(s)	890, 1055
BseLI	CCNNNNNNNGG	3 cut(s)	569, 570, 1585
BseMI	GCAATG	2 cut(s)	445, 796
BseMII	CTCAG	7 cut(s)	272, 353, 498, 689, 1205, 1629, 1697
BseNI	ACTGG	1 cut(s)	588
BseRI	GAGGAG	2 cut(s)	926, 1818
BseSI	GKGCMC	1 cut(s)	1109
BseXI	GCAGC	7 cut(s)	223, 275, 304, 356, 817, 1847, 1860
BsgI	GTGCAG	4 cut(s)	783, 1261, 1481, 1745
Bsh1236I	CGCG	1 cut(s)	981
BshFI	GGCC	3 cut(s)	753, 852, 869
BshVI	ATCGAT	1 cut(s)	617
BsiHKAI	GWGCWC	3 cut(s)	608, 1109, 1791
BsiHKCI	CYCGRG	2 cut(s)	1161, 1422
BslFI	GGGAC	4 cut(s)	815, 1018, 1048, 1058
BslI	CCNNNNNNNGG	3 cut(s)	569, 570, 1585
BsmFI	GGGAC	4 cut(s)	815, 1018, 1048, 1058
BsnI	GGCC	3 cut(s)	753, 852, 869
BsoBI	CYCGRG	2 cut(s)	1161, 1422
Bsp119I	TTCGAA	1 cut(s)	527
Bsp1286I	GDGCHC	3 cut(s)	608, 1109, 1791
Bsp1720I	GCTNAGC	4 cut(s)	281, 362, 507, 1214
BspACI	CCGC	4 cut(s)	679, 1150, 1186, 1211
BspANI	GGCC	3 cut(s)	753, 852, 869
BspCNI	CTCAG	7 cut(s)	273, 354, 499, 688, 1206, 1630, 1696
BspDI	ATCGAT	1 cut(s)	617
BspFNI	CGCG	1 cut(s)	981
BspHI	TCATGA	3 cut(s)	250, 331, 967
BspLI	GGNNCC	4 cut(s)	12, 630, 746, 851
BspMAI	CTGCAG	1 cut(s)	1878
BspPI	GGATC	7 cut(s)	5, 18, 623, 636, 706, 1433, 1717
BspT104I	TTCGAA	1 cut(s)	527
BsrBI	CCGCTC	1 cut(s)	1150
BsrDI	GCAATG	2 cut(s)	445, 796
BsrI	ACTGG	1 cut(s)	588
BssECI	CCNNGG	4 cut(s)	433, 748, 1281, 1704
BssNAI	GTATAC	1 cut(s)	1377
BssSI	CACGAG	1 cut(s)	1488
BssT1I	CCWWGG	4 cut(s)	433, 748, 1281, 1704
Bst1107I	GTATAC	1 cut(s)	1377
Bst2BI	CACGAG	1 cut(s)	1488
Bst2UI	CCWGG	2 cut(s)	111, 1230
Bst4CI	ACNGT	5 cut(s)	119, 163, 176, 1173, 1634
Bst6I	CTCTTC	2 cut(s)	834, 921
BstAPI	GCANNNNNTGC	1 cut(s)	1141
BstBAI	YACGTR	1 cut(s)	517
BstBI	TTCGAA	1 cut(s)	527
BstC8I	GCNNGC	3 cut(s)	983, 1811, 1828
BstENI	CCTNNNNNAGG	1 cut(s)	1583
BstF5I	GGATG	2 cut(s)	890, 1055
BstFNI	CGCG	1 cut(s)	981
BstHHI	GCGC	1 cut(s)	981
BstMWI	GCNNNNNNNGC	7 cut(s)	306, 387, 730, 866, 1141, 1688, 1832
BstNI	CCWGG	2 cut(s)	111, 1230
BstNSI	RCATGY	2 cut(s)	1604, 1842
BstSCI	CCNGG	2 cut(s)	109, 1228
BstSFI	CTRYAG	1 cut(s)	1874
BstSLI	GKGCMC	1 cut(s)	1109
BstUI	CGCG	1 cut(s)	981
BstV1I	GCAGC	7 cut(s)	223, 275, 304, 356, 817, 1847, 1860
BstV2I	GAAGAC	1 cut(s)	724
BstX2I	RGATCY	4 cut(s)	10, 628, 1438, 1709
BstXI	CCANNNNNNTGG	1 cut(s)	1775
BstYI	RGATCY	4 cut(s)	10, 628, 1438, 1709
BstZ17I	GTATAC	1 cut(s)	1377
Bsu15I	ATCGAT	1 cut(s)	617
BsuI	GTATCC	1 cut(s)	1711
BsuRI	GGCC	3 cut(s)	753, 852, 869
BsuTUI	ATCGAT	1 cut(s)	617
BtsCI	GGATG	2 cut(s)	890, 1055
BtsI	GCAGTG	1 cut(s)	1366
BtsIMutI	CAGTG	3 cut(s)	168, 1107, 1366
Cac8I	GCNNGC	3 cut(s)	983, 1811, 1828
CciI	TCATGA	3 cut(s)	250, 331, 967
CfoI	GCGC	1 cut(s)	981
Cfr13I	GGNCC	3 cut(s)	221, 850, 1053
ClaI	ATCGAT	1 cut(s)	617
CseI	GACGC	1 cut(s)	1382
CsiI	ACCWGGT	1 cut(s)	1228
Csp6I	GTAC	4 cut(s)	120, 453, 514, 1465
CspCI	CAANNNNNGTGG	2 cut(s)	33, 68
CviQI	GTAC	4 cut(s)	120, 453, 514, 1465
EaeI	YGGCCR	1 cut(s)	867
Eam1104I	CTCTTC	2 cut(s)	834, 921
EarI	CTCTTC	2 cut(s)	834, 921
Eco130I	CCWWGG	4 cut(s)	433, 748, 1281, 1704
Eco147I	AGGCCT	1 cut(s)	753
Eco47I	GGWCC	2 cut(s)	221, 1053
Eco57I	CTGAAG	4 cut(s)	1214, 1401, 1455, 1502
Eco88I	CYCGRG	2 cut(s)	1161, 1422
EcoNI	CCTNNNNNAGG	1 cut(s)	1583
EcoO109I	RGGNCCY	1 cut(s)	221
EcoRII	CCWGG	2 cut(s)	109, 1228
EcoT14I	CCWWGG	4 cut(s)	433, 748, 1281, 1704
ErhI	CCWWGG	4 cut(s)	433, 748, 1281, 1704
FaqI	GGGAC	4 cut(s)	815, 1018, 1048, 1058
FauI	CCCGC	2 cut(s)	1143, 1179
FbaI	TGATCA	7 cut(s)	94, 241, 253, 322, 334, 970, 1414
FblI	GTMKAC	1 cut(s)	1376
Fnu4HI	GCNGC	7 cut(s)	237, 264, 318, 345, 806, 1836, 1874
FokI	GGATG	2 cut(s)	897, 1062
Fsp4HI	GCNGC	7 cut(s)	237, 264, 318, 345, 806, 1836, 1874
FspBI	CTAG	7 cut(s)	420, 434, 458, 663, 669, 1304, 1903
GlaI	GCGC	1 cut(s)	980
GluI	GCNGC	7 cut(s)	237, 264, 318, 345, 806, 1836, 1874
GsuI	CTGGAG	2 cut(s)	1166, 1611
HaeIII	GGCC	3 cut(s)	753, 852, 869
HgaI	GACGC	1 cut(s)	1382
HhaI	GCGC	1 cut(s)	981
Hin6I	GCGC	1 cut(s)	979
HinP1I	GCGC	1 cut(s)	979
HincII	GTYRAC	1 cut(s)	1732
HindII	GTYRAC	1 cut(s)	1732
HinfI	GANTC	9 cut(s)	247, 274, 328, 355, 529, 574, 1200, 1243, 1425
HpaI	GTTAAC	1 cut(s)	1732
Hpy166II	GTNNAC	6 cut(s)	768, 1107, 1377, 1717, 1732, 1844
Hpy188I	TCNGA	8 cut(s)	246, 327, 579, 1020, 1194, 1435, 1647, 1743
Hpy188III	TCNNGA	9 cut(s)	227, 251, 332, 458, 968, 1271, 1292, 1570, 1637
Hpy8I	GTNNAC	6 cut(s)	768, 1107, 1377, 1717, 1732, 1844
HpyAV	CCTTC	2 cut(s)	952, 1874
HpyCH4III	ACNGT	5 cut(s)	119, 163, 176, 1173, 1634
HpyCH4IV	ACGT	1 cut(s)	516
HpyF10VI	GCNNNNNNNGC	7 cut(s)	306, 387, 730, 866, 1141, 1688, 1832
HpySE526I	ACGT	1 cut(s)	516
HspAI	GCGC	1 cut(s)	979
Ksp22I	TGATCA	7 cut(s)	94, 241, 253, 322, 334, 970, 1414
KspAI	GTTAAC	1 cut(s)	1732
LmnI	GCTCC	5 cut(s)	603, 744, 1147, 1390, 1743
Lsp1109I	GCAGC	7 cut(s)	223, 275, 304, 356, 817, 1847, 1860
LweI	GCATC	1 cut(s)	1822
MabI	ACCWGGT	1 cut(s)	1228
MaeI	CTAG	7 cut(s)	420, 434, 458, 663, 669, 1304, 1903
MaeII	ACGT	1 cut(s)	516
MaeIII	GTNAC	2 cut(s)	176, 1492
MbiI	CCGCTC	1 cut(s)	1150
MflI	RGATCY	4 cut(s)	10, 628, 1438, 1709
MhlI	GDGCHC	3 cut(s)	608, 1109, 1791
MlsI	TGGCCA	1 cut(s)	869
MluNI	TGGCCA	1 cut(s)	869
MlyI	GAGTC	3 cut(s)	241, 322, 1434
MmeI	TCCRAC	1 cut(s)	862
Mox20I	TGGCCA	1 cut(s)	869
MroXI	GAANNNNTTC	2 cut(s)	1014, 1262
MscI	TGGCCA	1 cut(s)	869
MslI	CAYNNNNRTG	1 cut(s)	1773
Msp20I	TGGCCA	1 cut(s)	869
MspA1I	CMGCKG	5 cut(s)	280, 361, 679, 1213, 1873
MspR9I	CCNGG	2 cut(s)	111, 1230
MvaI	CCWGG	2 cut(s)	111, 1230
MvnI	CGCG	1 cut(s)	981
MwoI	GCNNNNNNNGC	7 cut(s)	306, 387, 730, 866, 1141, 1688, 1832
NlaIV	GGNNCC	4 cut(s)	12, 630, 746, 851
NspI	RCATGY	2 cut(s)	1604, 1842
NspV	TTCGAA	1 cut(s)	527
PaeR7I	CTCGAG	1 cut(s)	1422
PagI	TCATGA	3 cut(s)	250, 331, 967
PceI	AGGCCT	1 cut(s)	753
PciI	ACATGT	1 cut(s)	1600
PdmI	GAANNNNTTC	2 cut(s)	1014, 1262
PfeI	GAWTC	6 cut(s)	274, 355, 529, 574, 1200, 1243
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	7 cut(s)	238, 265, 319, 346, 807, 1837, 1875
PleI	GAGTC	3 cut(s)	241, 322, 1433
PpsI	GAGTC	3 cut(s)	241, 322, 1433
Ppu21I	YACGTR	1 cut(s)	517
PpuMI	RGGWCCY	1 cut(s)	221
PscI	ACATGT	1 cut(s)	1600
Psp5II	RGGWCCY	1 cut(s)	221
Psp6I	CCWGG	2 cut(s)	109, 1228
PspGI	CCWGG	2 cut(s)	109, 1228
PspN4I	GGNNCC	4 cut(s)	12, 630, 746, 851
PspPI	GGNCC	3 cut(s)	221, 850, 1053
PspPPI	RGGWCCY	1 cut(s)	221
PspXI	VCTCGAGB	1 cut(s)	1422
PstI	CTGCAG	1 cut(s)	1878
PsuI	RGATCY	4 cut(s)	10, 628, 1438, 1709
PvuII	CAGCTG	3 cut(s)	280, 361, 1873
RsaI	GTAC	4 cut(s)	121, 454, 515, 1466
RsaNI	GTAC	4 cut(s)	120, 453, 514, 1465
RseI	CAYNNNNRTG	1 cut(s)	1773
SatI	GCNGC	7 cut(s)	237, 264, 318, 345, 806, 1836, 1874
Sau96I	GGNCC	3 cut(s)	221, 850, 1053
ScaI	AGTACT	1 cut(s)	454
SchI	GAGTC	3 cut(s)	241, 322, 1434
ScrFI	CCNGG	2 cut(s)	111, 1230
SduI	GDGCHC	3 cut(s)	608, 1109, 1791
SexAI	ACCWGGT	1 cut(s)	1228
SfaNI	GCATC	1 cut(s)	1822
SfcI	CTRYAG	1 cut(s)	1874
Sfr274I	CTCGAG	1 cut(s)	1422
SfuI	TTCGAA	1 cut(s)	527
SinI	GGWCC	2 cut(s)	221, 1053
SlaI	CTCGAG	1 cut(s)	1422
SmiMI	CAYNNNNRTG	1 cut(s)	1773
SmlI	CTYRAG	3 cut(s)	225, 1094, 1422
SmoI	CTYRAG	3 cut(s)	225, 1094, 1422
SseBI	AGGCCT	1 cut(s)	753
SsiI	CCGC	4 cut(s)	679, 1150, 1186, 1211
SspI	AATATT	1 cut(s)	470
SspMI	CTAG	7 cut(s)	420, 434, 458, 663, 669, 1304, 1903
StuI	AGGCCT	1 cut(s)	753
StyD4I	CCNGG	2 cut(s)	109, 1228
StyI	CCWWGG	4 cut(s)	433, 748, 1281, 1704
TaaI	ACNGT	5 cut(s)	119, 163, 176, 1173, 1634
TaiI	ACGT	1 cut(s)	519
TaqI	TCGA	9 cut(s)	158, 191, 527, 617, 889, 1423, 1541, 1569, 1791
TatI	WGTACW	2 cut(s)	452, 1464
TfiI	GAWTC	6 cut(s)	274, 355, 529, 574, 1200, 1243
TscAI	CASTG	3 cut(s)	168, 1114, 1366
TseI	GCWGC	7 cut(s)	236, 263, 317, 344, 805, 1835, 1873
TspDTI	ATGAA	2 cut(s)	971, 1559
TspGWI	ACGGA	1 cut(s)	1062
TspRI	CASTG	3 cut(s)	168, 1114, 1366
VneI	GTGCAC	1 cut(s)	1105
VpaK11BI	GGWCC	2 cut(s)	221, 1053
XagI	CCTNNNNNAGG	1 cut(s)	1583
XapI	RAATTY	4 cut(s)	757, 1010, 1261, 1334
XbaI	TCTAGA	1 cut(s)	457
XceI	RCATGY	2 cut(s)	1604, 1842
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1288
XhoI	CTCGAG	1 cut(s)	1422
XmaJI	CCTAGG	1 cut(s)	433
XmiI	GTMKAC	1 cut(s)	1376
XmnI	GAANNNNTTC	2 cut(s)	1014, 1262
XspI	CTAG	7 cut(s)	420, 434, 458, 663, 669, 1304, 1903
ZrmI	AGTACT	1 cut(s)	454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.