Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004233

Physical Location & Seq

Genomic Coordinates Reverse (-)

9629846 .. 9634425

Gene Structure 4580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G006040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTATTGGGATCCAATGTTGCCCAATCTCTTTCTTCAAAACCCACCAATCTTGCAAAACCCTACCTACCATCAAAACGCTAATCCCAACTTTGATCATCTTCTTTTTCCTGGAAACAGTACCAACAATCTTATCAACAACAATAACAATGAGTTTTCGACAGCGGGATTTAACAGTAACAATGAGTTTTCGACATTGGGATTTGGAACAGGAGGTTCTCATGATTTTGCTGCTGATCAGACTCATGATCAACTCGCAGCTTCTTTGAATCGGCTGAGCATATCCAATAGTGGCAGTTCAGGCAATCAAAGAATACCGAACAACTATATGTCTAGCTCTACAACCCTAGGCAATGGTGGGTTCAGTACTCTAGAGCAGGAATATTTGGAGAGGTTGAACCAATATGCTTTCTTAATGGCTGAGCAGTACATGAGGCGTTCGAATCCCACTACTGCTAACAATGGAATACTCAATCCCCATAGTTGGAATCGGAATAGCACCAGTAGTAGTAGGAGCACTAGTCAATCGATTTATGGGGATCAATTTGGATTAGGTTTTAACCAAATTAGGTCTAGTTCTAGTTCTCAGCGGAATAGGGTTAGCAGGGGATCAAGGTTTGCTAATGGGGGTGGAAGACAGCGTTTCGGGCAAGAAGAAAGGAGCCAAGGCCTGAATTTGATGTCCACTAAAGATCAAAGGCTTGGCAATGGGTCTGCACCGCGGCAAATACCGAGTTATTACTCTGTCCCTTTGGAAGAGTTGAGGGGCCAAATTGCTTTCGTGGCCAAAGATCATGTTGGATGTCGATTTTTACAAAAGAAGATTGAGGAGGGTAAGATGGAAGAGATTGAAATGATTTTTAATGAGGTTATGAAGGAGGGTCATGATCATTTGCGCGAGCTAATGGTAGATCAATTTGGGACTGAATTTATTCAGAAACTTGTGGAGGGGACTAACAGGGACGGATGGACCAAAATGCTTGATTTGGTGATGAGTGATGAGAGGAAACTCAAGGATATGTGCACTGACCAGCATGGAAGTCGTGCCATGCAGAAGTTGCTGGAGCGGGTTGAAACCCGAGAGCAACAGTCCTCATTTATGCGGGTTCTGAAGCGAATCACAATTCCGCTGAGCAAAACCCAGCCTGGTTATTATGTGATTCAAGTTTGCTTGAAAAATTTCTCTCCTGACTGCACCAAGGGTGTTATGGAATTAGTGCTAGATAACTGCCTTGCATTAGCAAAAGACAAATTTGGGTGTTGCTTAGTGCAAAGCAGTGTGCATTATGCGTATACTGAAGCTAAGGAGCGTCTTGTGGCTGACATAACTGAGCATGCTCGAGTCCTCTCCGAAGATCCTTACGGGAACTATGTTGTGCAGTACATAATTGGACTAAAAATACCTTGTGTAACAGCAGACATTTTAGGTCAGCTTCAGGGGTGTTTTGTTAATCTGTCGATGAACAAGCATGGAAGTAATGTAGTCGAGAAAACCCTGAAAGAGGCTGGAGAAGAACATGCCAATATGATTATTAACGAGATGATTAACAGTCCTGAGTTTCTAAATGTTCTTCAAAATCCTTATGGGAATTATGTTGCTCAGTCTGCTCTTGCAGTATCCAAGGGATCTGTTCACAATGCTCTTGTTAACCTCATTCGGAGCAATTACCCTCATCTGCACAGCCATCTGTATGGGAAAAGGGTGCTCGACAAAATCAGAGGAGGCAGACATCGTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF zf-CCCH

Protein Analysis

579

Amino Acids

65.1

Weight (kDa)

8.0

Isoelectric Point (pI)

43.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF	PF00806	260 - 291	7.8e-08	Pumilio-family RNA binding repeat
PUF	PF00806	409 - 442	4.1e-06	Pumilio-family RNA binding repeat
PUF	PF00806	482 - 515	7.3e-08	Pumilio-family RNA binding repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004233)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g30780 FvH4_5g30780
malus_domestica	MD05G1093500.v1.1
prunus_persica	Prupe.8G138200_v2.0.a1 Prupe.8G138200_v2.0.a1
pyrus_communis	pycom15g06920
rosa_chinensis	RchiOBHm_Chr6g0254321 RchiOBHm_Chr6g0254351
rosa_laevigata	RLG00000014133 RLG00000014918 RLG00000014919 RLG00000014923 RLG00000014926
rosa_multiflora	Rmu_sc0006565.1_g000002 Rmu_sc0007138.1_g000009 Rmu_sc0027609.1_g000002
rosa_roxburghii	Rroxscaffold_7G00210870 Rroxscaffold_7G00210910 Rroxscaffold_7G00210930
rosa_rugosa	Rorug05G0552000
rosa_samantha	Rh6AG068500 Rh6AG068800 Rh6AG068900 Rh6BG061200 Rh6CG061000 Rh6CG061100 Rh6CG061500 Rh6DG058000 Rh6DG058300 Rh6DG058400 Rh6DG058700
rosa_wichuraiana	Rw6G006000 Rw6G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1066
AccI	GTMKAC	1 cut(s)	1292
AccII	CGCG	2 cut(s)	721, 897
AciI	CCGC	7 cut(s)	164, 589, 719, 721, 1066, 1102, 1127
AclWI	GGATC	6 cut(s)	5, 18, 546, 616, 1349, 1633
AcoI	YGGCCR	1 cut(s)	783
AcsI	RAATTY	4 cut(s)	673, 926, 1177, 1250
AcuI	CTGAAG	3 cut(s)	1130, 1317, 1418
AfaI	GTAC	4 cut(s)	121, 367, 428, 1382
AfiI	CCNNNNNNNGG	2 cut(s)	483, 1501
AgsI	TTSAA	8 cut(s)	38, 268, 397, 851, 1073, 1163, 1174, 1574
AhlI	ACTAGT	1 cut(s)	518
AjnI	CCWGG	2 cut(s)	109, 1144
AluBI	AGCT	5 cut(s)	260, 336, 901, 1301, 1432
AluI	AGCT	5 cut(s)	260, 336, 901, 1301, 1432
Alw21I	GWGCWC	3 cut(s)	518, 1025, 1707
Alw44I	GTGCAC	1 cut(s)	1021
AlwI	GGATC	6 cut(s)	5, 18, 546, 616, 1349, 1633
Ama87I	CYCGRG	2 cut(s)	1077, 1338
AoxI	GGCC	3 cut(s)	667, 766, 783
ApaLI	GTGCAC	1 cut(s)	1021
ApeKI	GCWGC	2 cut(s)	230, 257
ApoI	RAATTY	4 cut(s)	673, 926, 1177, 1250
Asp700I	GAANNNNTTC	2 cut(s)	930, 1178
AspA2I	CCTAGG	1 cut(s)	346
AspLEI	GCGC	1 cut(s)	897
AspS9I	GGNCC	2 cut(s)	766, 969
AsuHPI	GGTGA	1 cut(s)	1000
AsuII	TTCGAA	1 cut(s)	440
AvaI	CYCGRG	2 cut(s)	1077, 1338
AvaII	GGWCC	1 cut(s)	969
AvrII	CCTAGG	1 cut(s)	346
BaeGI	GKGCMC	1 cut(s)	1025
BalI	TGGCCA	1 cut(s)	785
BamHI	GGATCC	1 cut(s)	10
BbsI	GAAGAC	1 cut(s)	640
Bbv12I	GWGCWC	3 cut(s)	518, 1025, 1707
BbvI	GCAGC	2 cut(s)	217, 269
BccI	CCATC	4 cut(s)	78, 832, 960, 1692
BcgI	CGANNNNNNTGC	2 cut(s)	1022, 1056
BciT130I	CCWGG	2 cut(s)	111, 1146
BciVI	GTATCC	1 cut(s)	1627
BclI	TGATCA	4 cut(s)	94, 235, 247, 886
BcuI	ACTAGT	1 cut(s)	518
BfaI	CTAG	7 cut(s)	333, 347, 371, 519, 573, 579, 1220
BfuI	GTATCC	1 cut(s)	1627
BisI	GCNGC	3 cut(s)	231, 258, 722
BlnI	CCTAGG	1 cut(s)	346
BlpI	GCTNAGC	3 cut(s)	275, 420, 1130
BlsI	GCNGC	3 cut(s)	232, 259, 723
BmcAI	AGTACT	1 cut(s)	367
Bme1390I	CCNGG	2 cut(s)	111, 1146
Bme18I	GGWCC	1 cut(s)	969
BmeT110I	CYCGRG	2 cut(s)	1077, 1338
BmgT120I	GGNCC	2 cut(s)	766, 969
BmiI	GGNNCC	3 cut(s)	12, 662, 767
BmrFI	CCNGG	2 cut(s)	111, 1146
BpiI	GAAGAC	1 cut(s)	640
BpmI	CTGGAG	2 cut(s)	1082, 1527
Bpu10I	CCTNAGC	1 cut(s)	1302
Bpu1102I	GCTNAGC	3 cut(s)	275, 420, 1130
Bpu14I	TTCGAA	1 cut(s)	440
BpuEI	CTTGAG	1 cut(s)	995
Bsa29I	ATCGAT	1 cut(s)	527
BsaJI	CCNNGG	5 cut(s)	346, 664, 719, 1197, 1620
BsaXI	ACNNNNNCTCC	2 cut(s)	505, 535
Bsc4I	CCNNNNNNNGG	2 cut(s)	483, 1501
Bse1I	ACTGG	1 cut(s)	501
Bse3DI	GCAATG	2 cut(s)	358, 712
BseBI	CCWGG	2 cut(s)	111, 1146
BseCI	ATCGAT	1 cut(s)	527
BseDI	CCNNGG	5 cut(s)	346, 664, 719, 1197, 1620
BseGI	GGATG	2 cut(s)	806, 971
BseLI	CCNNNNNNNGG	2 cut(s)	483, 1501
BseMI	GCAATG	2 cut(s)	358, 712
BseMII	CTCAG	7 cut(s)	266, 411, 599, 1121, 1320, 1545, 1613
BseNI	ACTGG	1 cut(s)	501
BseRI	GAGGAG	2 cut(s)	842, 1734
BseSI	GKGCMC	1 cut(s)	1025
BseXI	GCAGC	2 cut(s)	217, 269
BseYI	CCCAGC	1 cut(s)	1140
BsgI	GTGCAG	4 cut(s)	699, 1177, 1397, 1661
Bsh1236I	CGCG	2 cut(s)	721, 897
BshFI	GGCC	3 cut(s)	669, 768, 785
BshVI	ATCGAT	1 cut(s)	527
BsiHKAI	GWGCWC	3 cut(s)	518, 1025, 1707
BsiHKCI	CYCGRG	2 cut(s)	1077, 1338
BslFI	GGGAC	4 cut(s)	731, 934, 964, 974
BslI	CCNNNNNNNGG	2 cut(s)	483, 1501
BsmFI	GGGAC	4 cut(s)	731, 934, 964, 974
BsnI	GGCC	3 cut(s)	669, 768, 785
BsoBI	CYCGRG	2 cut(s)	1077, 1338
Bsp119I	TTCGAA	1 cut(s)	440
Bsp1286I	GDGCHC	3 cut(s)	518, 1025, 1707
Bsp1720I	GCTNAGC	3 cut(s)	275, 420, 1130
BspACI	CCGC	7 cut(s)	164, 589, 719, 721, 1066, 1102, 1127
BspANI	GGCC	3 cut(s)	669, 768, 785
BspCNI	CTCAG	7 cut(s)	267, 412, 598, 1122, 1321, 1546, 1612
BspDI	ATCGAT	1 cut(s)	527
BspFNI	CGCG	2 cut(s)	721, 897
BspHI	TCATGA	3 cut(s)	220, 244, 883
BspLI	GGNNCC	3 cut(s)	12, 662, 767
BspPI	GGATC	6 cut(s)	5, 18, 546, 616, 1349, 1633
BspT104I	TTCGAA	1 cut(s)	440
BsrBI	CCGCTC	1 cut(s)	1066
BsrDI	GCAATG	2 cut(s)	358, 712
BsrI	ACTGG	1 cut(s)	501
BssECI	CCNNGG	5 cut(s)	346, 664, 719, 1197, 1620
BssNAI	GTATAC	1 cut(s)	1293
BssT1I	CCWWGG	4 cut(s)	346, 664, 1197, 1620
Bst1107I	GTATAC	1 cut(s)	1293
Bst2UI	CCWGG	2 cut(s)	111, 1146
Bst4CI	ACNGT	4 cut(s)	119, 176, 1089, 1550
Bst6I	CTCTTC	2 cut(s)	750, 837
BstAPI	GCANNNNNTGC	1 cut(s)	1057
BstBI	TTCGAA	1 cut(s)	440
BstC8I	GCNNGC	2 cut(s)	899, 1335
BstDEI	CTNAG	9 cut(s)	275, 420, 585, 1130, 1264, 1302, 1329, 1554, 1599
BstDSI	CCRYGG	1 cut(s)	719
BstENI	CCTNNNNNAGG	1 cut(s)	1499
BstF5I	GGATG	2 cut(s)	806, 971
BstFNI	CGCG	2 cut(s)	721, 897
BstHHI	GCGC	1 cut(s)	897
BstMWI	GCNNNNNNNGC	5 cut(s)	300, 646, 782, 1057, 1604
BstNI	CCWGG	2 cut(s)	111, 1146
BstNSI	RCATGY	2 cut(s)	1337, 1520
BstSCI	CCNGG	2 cut(s)	109, 1144
BstSLI	GKGCMC	1 cut(s)	1025
BstUI	CGCG	2 cut(s)	721, 897
BstV1I	GCAGC	2 cut(s)	217, 269
BstV2I	GAAGAC	1 cut(s)	640
BstX2I	RGATCY	3 cut(s)	10, 1354, 1625
BstXI	CCANNNNNNTGG	1 cut(s)	1691
BstYI	RGATCY	3 cut(s)	10, 1354, 1625
BstZ17I	GTATAC	1 cut(s)	1293
Bsu15I	ATCGAT	1 cut(s)	527
BsuI	GTATCC	1 cut(s)	1627
BsuRI	GGCC	3 cut(s)	669, 768, 785
BsuTUI	ATCGAT	1 cut(s)	527
BtgI	CCRYGG	1 cut(s)	719
BtsCI	GGATG	2 cut(s)	806, 971
BtsI	GCAGTG	1 cut(s)	1282
BtsIMutI	CAGTG	2 cut(s)	1023, 1282
Cac8I	GCNNGC	2 cut(s)	899, 1335
CciI	TCATGA	3 cut(s)	220, 244, 883
CfoI	GCGC	1 cut(s)	897
Cfr13I	GGNCC	2 cut(s)	766, 969
Cfr42I	CCGCGG	1 cut(s)	722
ClaI	ATCGAT	1 cut(s)	527
CseI	GACGC	1 cut(s)	1298
Csp6I	GTAC	4 cut(s)	120, 366, 427, 1381
CspCI	CAANNNNNGTGG	2 cut(s)	33, 68
CviQI	GTAC	4 cut(s)	120, 366, 427, 1381
DdeI	CTNAG	9 cut(s)	275, 420, 585, 1130, 1264, 1302, 1329, 1554, 1599
EaeI	YGGCCR	1 cut(s)	783
Eam1104I	CTCTTC	2 cut(s)	750, 837
EarI	CTCTTC	2 cut(s)	750, 837
Eco130I	CCWWGG	4 cut(s)	346, 664, 1197, 1620
Eco147I	AGGCCT	1 cut(s)	669
Eco47I	GGWCC	1 cut(s)	969
Eco57I	CTGAAG	3 cut(s)	1130, 1317, 1418
Eco88I	CYCGRG	2 cut(s)	1077, 1338
EcoNI	CCTNNNNNAGG	1 cut(s)	1499
EcoRII	CCWGG	2 cut(s)	109, 1144
EcoT14I	CCWWGG	4 cut(s)	346, 664, 1197, 1620
ErhI	CCWWGG	4 cut(s)	346, 664, 1197, 1620
FaqI	GGGAC	4 cut(s)	731, 934, 964, 974
FauI	CCCGC	3 cut(s)	157, 1059, 1095
FbaI	TGATCA	4 cut(s)	94, 235, 247, 886
FblI	GTMKAC	1 cut(s)	1292
Fnu4HI	GCNGC	3 cut(s)	231, 258, 722
FokI	GGATG	2 cut(s)	813, 978
Fsp4HI	GCNGC	3 cut(s)	231, 258, 722
FspBI	CTAG	7 cut(s)	333, 347, 371, 519, 573, 579, 1220
GlaI	GCGC	1 cut(s)	896
GluI	GCNGC	3 cut(s)	231, 258, 722
GsaI	CCCAGC	1 cut(s)	1144
GsuI	CTGGAG	2 cut(s)	1082, 1527
HaeIII	GGCC	3 cut(s)	669, 768, 785
HgaI	GACGC	1 cut(s)	1298
HhaI	GCGC	1 cut(s)	897
Hin6I	GCGC	1 cut(s)	895
HinP1I	GCGC	1 cut(s)	895
HincII	GTYRAC	1 cut(s)	1648
HindII	GTYRAC	1 cut(s)	1648
HinfI	GANTC	7 cut(s)	241, 268, 442, 487, 1116, 1159, 1341
HpaI	GTTAAC	1 cut(s)	1648
HphI	GGTGA	1 cut(s)	1000
Hpy166II	GTNNAC	5 cut(s)	684, 1023, 1293, 1633, 1648
Hpy188I	TCNGA	7 cut(s)	240, 492, 936, 1110, 1351, 1659, 1718
Hpy188III	TCNNGA	7 cut(s)	221, 245, 371, 884, 1187, 1486, 1553
Hpy8I	GTNNAC	5 cut(s)	684, 1023, 1293, 1633, 1648
HpyAV	CCTTC	1 cut(s)	868
HpyCH4III	ACNGT	4 cut(s)	119, 176, 1089, 1550
HpyF10VI	GCNNNNNNNGC	5 cut(s)	300, 646, 782, 1057, 1604
HpyF3I	CTNAG	9 cut(s)	275, 420, 585, 1130, 1264, 1302, 1329, 1554, 1599
HspAI	GCGC	1 cut(s)	895
Ksp22I	TGATCA	4 cut(s)	94, 235, 247, 886
KspAI	GTTAAC	1 cut(s)	1648
KspI	CCGCGG	1 cut(s)	722
LmnI	GCTCC	5 cut(s)	513, 660, 1063, 1306, 1659
Lsp1109I	GCAGC	2 cut(s)	217, 269
MaeI	CTAG	7 cut(s)	333, 347, 371, 519, 573, 579, 1220
MaeIII	GTNAC	2 cut(s)	176, 1408
MbiI	CCGCTC	1 cut(s)	1066
MflI	RGATCY	3 cut(s)	10, 1354, 1625
MhlI	GDGCHC	3 cut(s)	518, 1025, 1707
MlsI	TGGCCA	1 cut(s)	785
MluNI	TGGCCA	1 cut(s)	785
MlyI	GAGTC	2 cut(s)	235, 1350
MmeI	TCCRAC	2 cut(s)	464, 778
Mox20I	TGGCCA	1 cut(s)	785
MroXI	GAANNNNTTC	2 cut(s)	930, 1178
MscI	TGGCCA	1 cut(s)	785
MseI	TTAA	8 cut(s)	171, 413, 558, 861, 1449, 1533, 1545, 1647
MslI	CAYNNNNRTG	1 cut(s)	1689
Msp20I	TGGCCA	1 cut(s)	785
MspA1I	CMGCKG	4 cut(s)	164, 589, 721, 1129
MspR9I	CCNGG	2 cut(s)	111, 1146
MvaI	CCWGG	2 cut(s)	111, 1146
MvnI	CGCG	2 cut(s)	721, 897
MwoI	GCNNNNNNNGC	5 cut(s)	300, 646, 782, 1057, 1604
NlaIV	GGNNCC	3 cut(s)	12, 662, 767
NspI	RCATGY	2 cut(s)	1337, 1520
NspV	TTCGAA	1 cut(s)	440
PaeI	GCATGC	1 cut(s)	1337
PaeR7I	CTCGAG	1 cut(s)	1338
PagI	TCATGA	3 cut(s)	220, 244, 883
PceI	AGGCCT	1 cut(s)	669
PdmI	GAANNNNTTC	2 cut(s)	930, 1178
PfeI	GAWTC	5 cut(s)	268, 442, 487, 1116, 1159
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	3 cut(s)	232, 259, 723
PleI	GAGTC	2 cut(s)	235, 1349
PpsI	GAGTC	2 cut(s)	235, 1349
Psp6I	CCWGG	2 cut(s)	109, 1144
PspFI	CCCAGC	1 cut(s)	1140
PspGI	CCWGG	2 cut(s)	109, 1144
PspN4I	GGNNCC	3 cut(s)	12, 662, 767
PspPI	GGNCC	2 cut(s)	766, 969
PspXI	VCTCGAGB	1 cut(s)	1338
PsuI	RGATCY	3 cut(s)	10, 1354, 1625
RsaI	GTAC	4 cut(s)	121, 367, 428, 1382
RsaNI	GTAC	4 cut(s)	120, 366, 427, 1381
RseI	CAYNNNNRTG	1 cut(s)	1689
SacII	CCGCGG	1 cut(s)	722
SaqAI	TTAA	8 cut(s)	171, 413, 558, 861, 1449, 1533, 1545, 1647
SatI	GCNGC	3 cut(s)	231, 258, 722
Sau96I	GGNCC	2 cut(s)	766, 969
ScaI	AGTACT	1 cut(s)	367
SchI	GAGTC	2 cut(s)	235, 1350
ScrFI	CCNGG	2 cut(s)	111, 1146
SduI	GDGCHC	3 cut(s)	518, 1025, 1707
Sfr274I	CTCGAG	1 cut(s)	1338
Sfr303I	CCGCGG	1 cut(s)	722
SfuI	TTCGAA	1 cut(s)	440
SgrBI	CCGCGG	1 cut(s)	722
SinI	GGWCC	1 cut(s)	969
SlaI	CTCGAG	1 cut(s)	1338
SmiMI	CAYNNNNRTG	1 cut(s)	1689
SmlI	CTYRAG	2 cut(s)	1010, 1338
SmoI	CTYRAG	2 cut(s)	1010, 1338
SpeI	ACTAGT	1 cut(s)	518
SphI	GCATGC	1 cut(s)	1337
SseBI	AGGCCT	1 cut(s)	669
SsiI	CCGC	7 cut(s)	164, 589, 719, 721, 1066, 1102, 1127
SspI	AATATT	1 cut(s)	383
SspMI	CTAG	7 cut(s)	333, 347, 371, 519, 573, 579, 1220
StuI	AGGCCT	1 cut(s)	669
StyD4I	CCNGG	2 cut(s)	109, 1144
StyI	CCWWGG	4 cut(s)	346, 664, 1197, 1620
TaaI	ACNGT	4 cut(s)	119, 176, 1089, 1550
TaqI	TCGA	9 cut(s)	158, 191, 440, 527, 805, 1339, 1457, 1485, 1707
TatI	WGTACW	3 cut(s)	365, 426, 1380
TauI	GCSGC	1 cut(s)	724
TfiI	GAWTC	5 cut(s)	268, 442, 487, 1116, 1159
Tru1I	TTAA	8 cut(s)	171, 413, 558, 861, 1449, 1533, 1545, 1647
Tru9I	TTAA	8 cut(s)	171, 413, 558, 861, 1449, 1533, 1545, 1647
TscAI	CASTG	2 cut(s)	1030, 1282
TseI	GCWGC	2 cut(s)	230, 257
TspDTI	ATGAA	2 cut(s)	887, 1475
TspGWI	ACGGA	1 cut(s)	978
TspRI	CASTG	2 cut(s)	1030, 1282
VneI	GTGCAC	1 cut(s)	1021
VpaK11BI	GGWCC	1 cut(s)	969
XagI	CCTNNNNNAGG	1 cut(s)	1499
XapI	RAATTY	4 cut(s)	673, 926, 1177, 1250
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	2 cut(s)	1337, 1520
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1204
XhoI	CTCGAG	1 cut(s)	1338
XmaJI	CCTAGG	1 cut(s)	346
XmiI	GTMKAC	1 cut(s)	1292
XmnI	GAANNNNTTC	2 cut(s)	930, 1178
XspI	CTAG	7 cut(s)	333, 347, 371, 519, 573, 579, 1220
ZrmI	AGTACT	1 cut(s)	367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.