Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004233

Physical Location & Seq

Genomic Coordinates Reverse (-)

9668397 .. 9678125

Gene Structure 9729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG061200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGTATTGGGATCCCATGTTGCCTGATTGGGCACTTCAAAACCCACCAATCTTGCAAAACCCTCCCTACCATCAAAACACTAACCCCAACTTTGATCATCTTCTTTTTCCCGGAAACAATACCAACAATCTCATCAACAACAATAATAATGGGTTTTCGACAGTGGGATTTAACAGTAACAATGAGTTTTCGACATTGGGATTTGGAACAGGTGGGGGAGGTTCTCATGATTTTGCTGCTGATCAGACTCATGATCAACTCTCAGCTTCTTTGAATCGGCTGAGCATATCCAATAGTGGCAGTTCAGGCAATCAAAGAATACCGAACAACTATATGCCTAGCTCTACAATCCTAGGCAATGGTGGGTTCGGTACTCTAGAGCAGGAATATTTGGAGAGGTTGAACCAATATGCTTTCTTAATGGCTGAGCAGTACATGAGGCGTTCGAATCCCACTACTGCAAACAATGGAATACTCAATCCCCATAGTTGGAATCGGAATAGCACCACTAGTGGTAGGAGCACTAGTCAATCTATTTATGGGGATCAATTTGGATTTGGTTTTAACCAAATTAGGTCTAGTTCTAGTTCTCAGCGGAATGGGGTTAGCAGGGGATCAAGGTTTGCTAACGGGGCTGGAAGACAGCGTTTCGGGCAAGAAAAAAGGAGCCAAGGCCTAAATTTGATGTCCACCAAAGATCAAAGACTTGGCAATGGGTCTGCACCGCGGCATATACCAAGTTATTACTCTGTCCCTTTGGAAGAGTTGAGGGGCCAAATTGCTTTTGTGGCCAAAGATCATGTTGGATGTCGATTTTTACAAAAGAAGATTGAGGAGGGTAAGATGGAAGAGATTGAAATGATTTTTAATGAGGTTATGAAGGAGGGTCATGATCATTTGCGCGAGCTAATGGTAGATCAATTTGGGACTGAATTTATTCAGAAACTTGTGGAGGGGACTAACAGGGACGGATGGACCAAAATGCTTGATTTGGTGATGAGTGATGAGAGGAAACTCAAGGATATGTGCACTGACCAGCATGGAAGTCGTGCCATGCAGAAGTTGCTGGAGCGGGTTGAAACCCGAGAGCAACAGTCCTCATTCATGCGGGTTCTGAAGCGAATCACAATTCCGCTGAGCAAAACCCAGCCTGGTTATTATGTGATTCAAGTTTGCTTGAAAAATTTCTCTCCTGACTGCACCAAGGGTGTTCTGGAATTAGTGCTAGATAATTGCCTTGCATTAGCAAAAGACAAATTTGGGTGTTGCTTAGTGCAAAGCAGTGTGCATTATGCGTATACTGAAGCTAAGGAGCGTCTTGTGGCTGACATAACTGAGCATGCTCGAGTCCTCTCCGAAGATCCTTACGGGAACTATGTTGTGCAGTACATAATTGGACTAAAAATACCTCGTGTAACAGCAGACATTTTAGGTCAGCTTCAGGGGTATTTTGTTAATCTGTCGATGAACAAGCATGGAAGTAATGTAGTCGAGAAAACCCTGAAAGAGGCTGGAGAAGAACATGCCAATATGATTATTAACGAGATGATTAACAGTCCTGAGTTTCTGAATGTTCTTCAAAATCCTTATGGGAATTATGTTGCTCAGTCTGCTGTTGCAGTATCCAAGTCCTTCCCTTTGCTTTCTATCCTTTGTGGCAGGGATCTGTTCACAATGCTCTTGTTAACCTCATTCGGAGCAATTACCCTCATCTGCACAGCCATCTGTATGGGAAAAGGGTGCTCGACAAAACCAGAGGAGGCAGGCATCGTGCATAAGCAAGCAAAGCAGCATGAAAGCACAGCTGGAAGTACTGAACTTCAGGCACAATTTTTTGAGTCGGTGGAGACAAGGAAAGGTGGATCAGGTCCACGCGGTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF zf-CCCH

Protein Analysis

627

Amino Acids

69.84

Weight (kDa)

6.97

Isoelectric Point (pI)

41.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF	PF00806	262 - 293	8.6e-08	Pumilio-family RNA binding repeat
PUF	PF00806	411 - 444	4.5e-06	Pumilio-family RNA binding repeat
PUF	PF00806	483 - 517	6.3e-08	Pumilio-family RNA binding repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004233)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g30780 FvH4_5g30780
malus_domestica	MD05G1093500.v1.1
prunus_persica	Prupe.8G138200_v2.0.a1 Prupe.8G138200_v2.0.a1
pyrus_communis	pycom15g06920
rosa_chinensis	RchiOBHm_Chr6g0254321 RchiOBHm_Chr6g0254351
rosa_laevigata	RLG00000014133 RLG00000014918 RLG00000014919 RLG00000014923 RLG00000014926
rosa_multiflora	Rmu_sc0006565.1_g000002 Rmu_sc0007138.1_g000009 Rmu_sc0027609.1_g000002
rosa_roxburghii	Rroxscaffold_7G00210870 Rroxscaffold_7G00210910 Rroxscaffold_7G00210930
rosa_rugosa	Rorug05G0552000
rosa_samantha	Rh6AG068500 Rh6AG068800 Rh6AG068900 Rh6BG061200 Rh6CG061000 Rh6CG061100 Rh6CG061500 Rh6DG058000 Rh6DG058300 Rh6DG058400 Rh6DG058700
rosa_wichuraiana	Rw6G006000 Rw6G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1072
AccI	GTMKAC	1 cut(s)	1298
AccII	CGCG	3 cut(s)	727, 903, 1875
AciI	CCGC	7 cut(s)	595, 725, 727, 1072, 1108, 1133, 1875
AclWI	GGATC	7 cut(s)	5, 18, 552, 622, 1355, 1671, 1870
AcoI	YGGCCR	1 cut(s)	789
AcsI	RAATTY	4 cut(s)	679, 932, 1183, 1256
AcuI	CTGAAG	4 cut(s)	1136, 1323, 1424, 1805
AfaI	GTAC	4 cut(s)	373, 434, 1388, 1813
AfiI	CCNNNNNNNGG	2 cut(s)	489, 1507
AgsI	TTSAA	8 cut(s)	38, 274, 403, 857, 1079, 1169, 1180, 1580
AhlI	ACTAGT	2 cut(s)	509, 524
AjnI	CCWGG	1 cut(s)	1150
AluBI	AGCT	6 cut(s)	266, 342, 907, 1307, 1438, 1805
AluI	AGCT	6 cut(s)	266, 342, 907, 1307, 1438, 1805
Alw21I	GWGCWC	3 cut(s)	524, 1031, 1745
Alw26I	GTCTC	1 cut(s)	1841
Alw44I	GTGCAC	1 cut(s)	1027
AlwI	GGATC	7 cut(s)	5, 18, 552, 622, 1355, 1671, 1870
Ama87I	CYCGRG	2 cut(s)	1083, 1344
AoxI	GGCC	3 cut(s)	673, 772, 789
ApaLI	GTGCAC	1 cut(s)	1027
ApeKI	GCWGC	2 cut(s)	236, 1789
ApoI	RAATTY	4 cut(s)	679, 932, 1183, 1256
Asp700I	GAANNNNTTC	2 cut(s)	936, 1184
AspA2I	CCTAGG	1 cut(s)	352
AspLEI	GCGC	1 cut(s)	903
AspS9I	GGNCC	3 cut(s)	772, 975, 1868
AsuC2I	CCSGG	1 cut(s)	111
AsuHPI	GGTGA	1 cut(s)	1006
AsuII	TTCGAA	1 cut(s)	446
AvaI	CYCGRG	2 cut(s)	1083, 1344
AvaII	GGWCC	2 cut(s)	975, 1868
AvrII	CCTAGG	1 cut(s)	352
BaeGI	GKGCMC	2 cut(s)	34, 1031
BalI	TGGCCA	1 cut(s)	791
BamHI	GGATCC	1 cut(s)	10
BauI	CACGAG	1 cut(s)	1410
BbsI	GAAGAC	1 cut(s)	646
Bbv12I	GWGCWC	3 cut(s)	524, 1031, 1745
BbvI	GCAGC	2 cut(s)	223, 1801
BccI	CCATC	4 cut(s)	78, 838, 966, 1730
BcgI	CGANNNNNNTGC	2 cut(s)	1028, 1062
BciT130I	CCWGG	1 cut(s)	1152
BciVI	GTATCC	1 cut(s)	1633
BclI	TGATCA	4 cut(s)	94, 241, 253, 892
BcnI	CCSGG	1 cut(s)	111
BcoDI	GTCTC	1 cut(s)	1841
BcuI	ACTAGT	2 cut(s)	509, 524
BfaI	CTAG	8 cut(s)	339, 353, 377, 510, 525, 579, 585, 1226
BfuI	GTATCC	1 cut(s)	1633
BisI	GCNGC	3 cut(s)	237, 728, 1790
BlnI	CCTAGG	1 cut(s)	352
BlpI	GCTNAGC	3 cut(s)	281, 426, 1136
BlsI	GCNGC	3 cut(s)	238, 729, 1791
BmcAI	AGTACT	1 cut(s)	1813
Bme1390I	CCNGG	2 cut(s)	111, 1152
Bme18I	GGWCC	2 cut(s)	975, 1868
BmeT110I	CYCGRG	2 cut(s)	1083, 1344
BmgT120I	GGNCC	3 cut(s)	772, 975, 1868
BmiI	GGNNCC	3 cut(s)	12, 668, 773
BmrFI	CCNGG	2 cut(s)	111, 1152
BmsI	GCATC	1 cut(s)	1776
BpiI	GAAGAC	1 cut(s)	646
BpmI	CTGGAG	2 cut(s)	1088, 1533
Bpu10I	CCTNAGC	1 cut(s)	1308
Bpu1102I	GCTNAGC	3 cut(s)	281, 426, 1136
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	1 cut(s)	1001
BpuMI	CCSGG	1 cut(s)	111
BsaJI	CCNNGG	4 cut(s)	352, 670, 725, 1203
BsaXI	ACNNNNNCTCC	2 cut(s)	511, 541
Bsc4I	CCNNNNNNNGG	2 cut(s)	489, 1507
Bse3DI	GCAATG	2 cut(s)	364, 718
BseBI	CCWGG	1 cut(s)	1152
BseDI	CCNNGG	4 cut(s)	352, 670, 725, 1203
BseGI	GGATG	2 cut(s)	812, 977
BseLI	CCNNNNNNNGG	2 cut(s)	489, 1507
BseMI	GCAATG	2 cut(s)	364, 718
BseMII	CTCAG	8 cut(s)	272, 276, 417, 605, 1127, 1326, 1551, 1619
BseRI	GAGGAG	2 cut(s)	848, 1772
BseSI	GKGCMC	2 cut(s)	34, 1031
BseXI	GCAGC	2 cut(s)	223, 1801
BseYI	CCCAGC	1 cut(s)	1146
BsgI	GTGCAG	4 cut(s)	705, 1183, 1403, 1699
Bsh1236I	CGCG	3 cut(s)	727, 903, 1875
BshFI	GGCC	3 cut(s)	675, 774, 791
BsiHKAI	GWGCWC	3 cut(s)	524, 1031, 1745
BsiHKCI	CYCGRG	2 cut(s)	1083, 1344
BsiSI	CCGG	1 cut(s)	111
BslFI	GGGAC	4 cut(s)	737, 940, 970, 980
BslI	CCNNNNNNNGG	2 cut(s)	489, 1507
BsmAI	GTCTC	1 cut(s)	1841
BsmFI	GGGAC	4 cut(s)	737, 940, 970, 980
BsnI	GGCC	3 cut(s)	675, 774, 791
BsoBI	CYCGRG	2 cut(s)	1083, 1344
Bsp119I	TTCGAA	1 cut(s)	446
Bsp1286I	GDGCHC	4 cut(s)	34, 524, 1031, 1745
Bsp1720I	GCTNAGC	3 cut(s)	281, 426, 1136
BspACI	CCGC	7 cut(s)	595, 725, 727, 1072, 1108, 1133, 1875
BspANI	GGCC	3 cut(s)	675, 774, 791
BspCNI	CTCAG	8 cut(s)	273, 275, 418, 604, 1128, 1327, 1552, 1618
BspFNI	CGCG	3 cut(s)	727, 903, 1875
BspHI	TCATGA	3 cut(s)	226, 250, 889
BspLI	GGNNCC	3 cut(s)	12, 668, 773
BspPI	GGATC	7 cut(s)	5, 18, 552, 622, 1355, 1671, 1870
BspT104I	TTCGAA	1 cut(s)	446
BsrBI	CCGCTC	1 cut(s)	1072
BsrDI	GCAATG	2 cut(s)	364, 718
BssECI	CCNNGG	4 cut(s)	352, 670, 725, 1203
BssNAI	GTATAC	1 cut(s)	1299
BssSI	CACGAG	1 cut(s)	1410
BssT1I	CCWWGG	3 cut(s)	352, 670, 1203
Bst1107I	GTATAC	1 cut(s)	1299
Bst2BI	CACGAG	1 cut(s)	1410
Bst2UI	CCWGG	1 cut(s)	1152
Bst4CI	ACNGT	4 cut(s)	163, 176, 1095, 1556
Bst6I	CTCTTC	2 cut(s)	756, 843
BstAPI	GCANNNNNTGC	1 cut(s)	1063
BstBI	TTCGAA	1 cut(s)	446
BstC8I	GCNNGC	4 cut(s)	905, 1341, 1765, 1782
BstDSI	CCRYGG	1 cut(s)	725
BstENI	CCTNNNNNAGG	1 cut(s)	1505
BstF5I	GGATG	2 cut(s)	812, 977
BstFNI	CGCG	3 cut(s)	727, 903, 1875
BstHHI	GCGC	1 cut(s)	903
BstMAI	GTCTC	1 cut(s)	1841
BstMWI	GCNNNNNNNGC	7 cut(s)	306, 632, 652, 788, 1063, 1610, 1786
BstNI	CCWGG	1 cut(s)	1152
BstNSI	RCATGY	2 cut(s)	1343, 1526
BstSCI	CCNGG	2 cut(s)	109, 1150
BstSLI	GKGCMC	2 cut(s)	34, 1031
BstUI	CGCG	3 cut(s)	727, 903, 1875
BstV1I	GCAGC	2 cut(s)	223, 1801
BstV2I	GAAGAC	1 cut(s)	646
BstX2I	RGATCY	3 cut(s)	10, 1360, 1663
BstXI	CCANNNNNNTGG	1 cut(s)	1729
BstYI	RGATCY	3 cut(s)	10, 1360, 1663
BstZ17I	GTATAC	1 cut(s)	1299
BsuI	GTATCC	1 cut(s)	1633
BsuRI	GGCC	3 cut(s)	675, 774, 791
BtgI	CCRYGG	1 cut(s)	725
BtsCI	GGATG	2 cut(s)	812, 977
BtsI	GCAGTG	1 cut(s)	1288
BtsIMutI	CAGTG	3 cut(s)	168, 1029, 1288
Cac8I	GCNNGC	4 cut(s)	905, 1341, 1765, 1782
CciI	TCATGA	3 cut(s)	226, 250, 889
CfoI	GCGC	1 cut(s)	903
Cfr13I	GGNCC	3 cut(s)	772, 975, 1868
Cfr42I	CCGCGG	1 cut(s)	728
CseI	GACGC	1 cut(s)	1304
Csp6I	GTAC	4 cut(s)	372, 433, 1387, 1812
CspCI	CAANNNNNGTGG	2 cut(s)	33, 68
CviQI	GTAC	4 cut(s)	372, 433, 1387, 1812
EaeI	YGGCCR	1 cut(s)	789
Eam1104I	CTCTTC	2 cut(s)	756, 843
EarI	CTCTTC	2 cut(s)	756, 843
Eco130I	CCWWGG	3 cut(s)	352, 670, 1203
Eco147I	AGGCCT	1 cut(s)	675
Eco47I	GGWCC	2 cut(s)	975, 1868
Eco57I	CTGAAG	4 cut(s)	1136, 1323, 1424, 1805
Eco88I	CYCGRG	2 cut(s)	1083, 1344
EcoNI	CCTNNNNNAGG	1 cut(s)	1505
EcoRII	CCWGG	1 cut(s)	1150
EcoT14I	CCWWGG	3 cut(s)	352, 670, 1203
ErhI	CCWWGG	3 cut(s)	352, 670, 1203
FaqI	GGGAC	4 cut(s)	737, 940, 970, 980
FauI	CCCGC	2 cut(s)	1065, 1101
FbaI	TGATCA	4 cut(s)	94, 241, 253, 892
FblI	GTMKAC	1 cut(s)	1298
Fnu4HI	GCNGC	3 cut(s)	237, 728, 1790
FokI	GGATG	2 cut(s)	819, 984
Fsp4HI	GCNGC	3 cut(s)	237, 728, 1790
FspBI	CTAG	8 cut(s)	339, 353, 377, 510, 525, 579, 585, 1226
GlaI	GCGC	1 cut(s)	902
GluI	GCNGC	3 cut(s)	237, 728, 1790
GsaI	CCCAGC	1 cut(s)	1150
GsuI	CTGGAG	2 cut(s)	1088, 1533
HaeIII	GGCC	3 cut(s)	675, 774, 791
HapII	CCGG	1 cut(s)	111
HgaI	GACGC	1 cut(s)	1304
HhaI	GCGC	1 cut(s)	903
Hin6I	GCGC	1 cut(s)	901
HinP1I	GCGC	1 cut(s)	901
HincII	GTYRAC	1 cut(s)	1686
HindII	GTYRAC	1 cut(s)	1686
HinfI	GANTC	8 cut(s)	247, 274, 448, 493, 1122, 1165, 1347, 1838
HpaI	GTTAAC	1 cut(s)	1686
HpaII	CCGG	1 cut(s)	111
HphI	GGTGA	1 cut(s)	1006
Hpy166II	GTNNAC	6 cut(s)	690, 1029, 1299, 1671, 1686, 1871
Hpy188I	TCNGA	8 cut(s)	246, 498, 942, 1116, 1357, 1569, 1697, 1883
Hpy188III	TCNNGA	8 cut(s)	227, 251, 377, 890, 1193, 1214, 1492, 1559
Hpy8I	GTNNAC	6 cut(s)	690, 1029, 1299, 1671, 1686, 1871
HpyAV	CCTTC	2 cut(s)	874, 1642
HpyCH4III	ACNGT	4 cut(s)	163, 176, 1095, 1556
HpyF10VI	GCNNNNNNNGC	7 cut(s)	306, 632, 652, 788, 1063, 1610, 1786
HspAI	GCGC	1 cut(s)	901
Ksp22I	TGATCA	4 cut(s)	94, 241, 253, 892
KspAI	GTTAAC	1 cut(s)	1686
KspI	CCGCGG	1 cut(s)	728
LmnI	GCTCC	5 cut(s)	519, 666, 1069, 1312, 1697
Lsp1109I	GCAGC	2 cut(s)	223, 1801
LweI	GCATC	1 cut(s)	1776
MaeI	CTAG	8 cut(s)	339, 353, 377, 510, 525, 579, 585, 1226
MaeIII	GTNAC	2 cut(s)	176, 1414
MbiI	CCGCTC	1 cut(s)	1072
MboII	GAAGA	8 cut(s)	92, 651, 773, 838, 860, 1370, 1529, 1568
MflI	RGATCY	3 cut(s)	10, 1360, 1663
MhlI	GDGCHC	4 cut(s)	34, 524, 1031, 1745
MlsI	TGGCCA	1 cut(s)	791
MluNI	TGGCCA	1 cut(s)	791
MlyI	GAGTC	3 cut(s)	241, 1356, 1847
MmeI	TCCRAC	2 cut(s)	470, 784
Mox20I	TGGCCA	1 cut(s)	791
MroXI	GAANNNNTTC	2 cut(s)	936, 1184
MscI	TGGCCA	1 cut(s)	791
MseI	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1685
MslI	CAYNNNNRTG	1 cut(s)	1727
Msp20I	TGGCCA	1 cut(s)	791
MspA1I	CMGCKG	4 cut(s)	595, 727, 1135, 1805
MspI	CCGG	1 cut(s)	111
MspR9I	CCNGG	2 cut(s)	111, 1152
MvaI	CCWGG	1 cut(s)	1152
MvnI	CGCG	3 cut(s)	727, 903, 1875
MwoI	GCNNNNNNNGC	7 cut(s)	306, 632, 652, 788, 1063, 1610, 1786
NciI	CCSGG	1 cut(s)	111
NlaIV	GGNNCC	3 cut(s)	12, 668, 773
NspI	RCATGY	2 cut(s)	1343, 1526
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	1 cut(s)	1343
PaeR7I	CTCGAG	1 cut(s)	1344
PagI	TCATGA	3 cut(s)	226, 250, 889
PceI	AGGCCT	1 cut(s)	675
PdmI	GAANNNNTTC	2 cut(s)	936, 1184
PfeI	GAWTC	5 cut(s)	274, 448, 493, 1122, 1165
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	3 cut(s)	238, 729, 1791
PleI	GAGTC	3 cut(s)	241, 1355, 1846
PpsI	GAGTC	3 cut(s)	241, 1355, 1846
Psp6I	CCWGG	1 cut(s)	1150
PspFI	CCCAGC	1 cut(s)	1146
PspGI	CCWGG	1 cut(s)	1150
PspN4I	GGNNCC	3 cut(s)	12, 668, 773
PspPI	GGNCC	3 cut(s)	772, 975, 1868
PspXI	VCTCGAGB	1 cut(s)	1344
PsuI	RGATCY	3 cut(s)	10, 1360, 1663
PvuII	CAGCTG	1 cut(s)	1805
RsaI	GTAC	4 cut(s)	373, 434, 1388, 1813
RsaNI	GTAC	4 cut(s)	372, 433, 1387, 1812
RseI	CAYNNNNRTG	1 cut(s)	1727
SacII	CCGCGG	1 cut(s)	728
SaqAI	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1685
SatI	GCNGC	3 cut(s)	237, 728, 1790
Sau96I	GGNCC	3 cut(s)	772, 975, 1868
ScaI	AGTACT	1 cut(s)	1813
SchI	GAGTC	3 cut(s)	241, 1356, 1847
ScrFI	CCNGG	2 cut(s)	111, 1152
SduI	GDGCHC	4 cut(s)	34, 524, 1031, 1745
SfaNI	GCATC	1 cut(s)	1776
Sfr274I	CTCGAG	1 cut(s)	1344
Sfr303I	CCGCGG	1 cut(s)	728
SfuI	TTCGAA	1 cut(s)	446
SgrBI	CCGCGG	1 cut(s)	728
SinI	GGWCC	2 cut(s)	975, 1868
SlaI	CTCGAG	1 cut(s)	1344
SmiMI	CAYNNNNRTG	1 cut(s)	1727
SmlI	CTYRAG	2 cut(s)	1016, 1344
SmoI	CTYRAG	2 cut(s)	1016, 1344
SpeI	ACTAGT	2 cut(s)	509, 524
SphI	GCATGC	1 cut(s)	1343
SseBI	AGGCCT	1 cut(s)	675
SsiI	CCGC	7 cut(s)	595, 725, 727, 1072, 1108, 1133, 1875
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	8 cut(s)	339, 353, 377, 510, 525, 579, 585, 1226
StuI	AGGCCT	1 cut(s)	675
StyD4I	CCNGG	2 cut(s)	109, 1150
StyI	CCWWGG	3 cut(s)	352, 670, 1203
TaaI	ACNGT	4 cut(s)	163, 176, 1095, 1556
TaqI	TCGA	8 cut(s)	158, 191, 446, 811, 1345, 1463, 1491, 1745
TatI	WGTACW	3 cut(s)	432, 1386, 1811
TauI	GCSGC	1 cut(s)	730
TfiI	GAWTC	5 cut(s)	274, 448, 493, 1122, 1165
Tru1I	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1685
Tru9I	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1685
TscAI	CASTG	3 cut(s)	168, 1036, 1288
TseI	GCWGC	2 cut(s)	236, 1789
TspDTI	ATGAA	4 cut(s)	893, 1093, 1481, 1809
TspGWI	ACGGA	1 cut(s)	984
TspRI	CASTG	3 cut(s)	168, 1036, 1288
VneI	GTGCAC	1 cut(s)	1027
VpaK11BI	GGWCC	2 cut(s)	975, 1868
XagI	CCTNNNNNAGG	1 cut(s)	1505
XapI	RAATTY	4 cut(s)	679, 932, 1183, 1256
XbaI	TCTAGA	1 cut(s)	376
XceI	RCATGY	2 cut(s)	1343, 1526
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1210
XhoI	CTCGAG	1 cut(s)	1344
XmaJI	CCTAGG	1 cut(s)	352
XmiI	GTMKAC	1 cut(s)	1298
XmnI	GAANNNNTTC	2 cut(s)	936, 1184
XspI	CTAG	8 cut(s)	339, 353, 377, 510, 525, 579, 585, 1226
ZrmI	AGTACT	1 cut(s)	1813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.