Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004233

Physical Location & Seq

Genomic Coordinates Forward (+)

61343162 .. 61347698

Gene Structure 4537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00210930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGTATTGGGATCCCATGTTGCCCAATCTCGTTCTTCAAAACCCACCAATCTTGCAAAACCCTCCCTACCATCAAAACACTAATCCCAACTTTGATCATCTTCTTTTTCCCGGAAACAGTACCAACAATCTTATCAACAACAATAATAATGAGTTTTCGACAGTGGGATTTAACAGTAACAATGGGTTTTCGACAATGGGATTTGGAACAGGTGGGGGAGGTCCTCATGATTTTGCTGCTGATCAGACTCATGATCAACTCGCAGCTTCTTTGAATCGGCTGAGCATATCCAATAATGGCAGTTCAGGCAATCAAAGAATACCCAACAACTATATGCCTAGCTCTACAATCCGAGGCAATGGTGGGTTCAGTAATCTAGAGCAGGAATATTTGGAGACGTTGAACCAATATGCTTTCTTAATGGCTGAGCAGTACATGAGGCGTTCGAATCCCACTACTGCTAACAATGGAATACTCAATCCCCATAGTTGGAATCGGAATAGCACCAGTAGTAGTAGGAGCACCAGTCAATCGATTTATGGGGATCAATTTGGATTTAGTTTTAACCAAATTAGGTCTAGTTCTAGTTCTCAGCGGAATGGGGTTAGCAGGGGATCAAGGTTTGCTAACGGGGCTGGAAGACAGCGTTTCGGGCAAGAAGAGAGGAGCCAAGGCCCGAATTTGATGTCCGCCAAAGATCAAAGGCTTGGCAACGGGTCTGCACCGCGGCATATACCAAGTTATTACTCTGTCCCTTTGGAAGAGTTGAGGGGCCAAATTGCTTTTGTGGCCAAAGATCATGTTGGATGTCGATTTTTACAAAAGAAGATTGAGGAGGGTAAGATGGAAGAGATTGAAATGATTTTTAATGAGGTTATGAAGGAGGGTCATGATCATTTGCGCGAGCTAATGGTAGATCAATTTGGGACTGAATTTATTCAGAAACTTGTGGAGGGGACTAACAGGGACGGATGGACCAAAATGCTTGATTTGGTGATGAGTGATGAGAGGAAACTCAAGGATATGTGCACTGACCAGCATGGAAGTCGTGCCATGCAGAAGTTGCTGGAGCGGGTTGAAACCCGAGAGCAACAGTCCTCGTTTATGCGGGTTCTGAAGCGAATCACAATTCCGCTGAGCAAAACCCAGCCTGGTTATTATGTGATTCAAGTTTGCTTGAAAAATTTCTCTCCTGACTGCACCAAGGGTGTTATGGAATTAGTGCTAGATAACTGCCTTGCATTAGCAAAAGACAAATTTGGGTGTTGCTTAGTGCAAAGCAGTGTGCATTATGCGTATACTGAAGCTAAGGAGCGTCTTGTGGCTGACATAACTGAGCATGCTCGAGTCCTCTCCGAAGATCCTTACGGGAACTATGTTGTGCAGTACATAATTGGACTAAAAATACCTCGTGTAACAGCAGACATTTTAGGTCAGCTTCGGGGGTATTTTGTTAATCTGTCGATGAACAAGCATGGAAGTAATGTAGTCGAGAAAACCCTGAAAGAGGCTGGAGAAGAACATGCCAATATGATTATTAACGAGATGATTAACAGTCCTGAGTTTCTGAATGTTCTTCAAAATCCTTATGGGAATTATGTTGCTCAGTCTGCTCTTGCAGTATCCAAGGGATCTGTTCACAATGATCTTGTTAACCTTATTCGGAGCAATTACCCTCATCTGCACAGCCATCTGTATGGGAAAAGGGTTCTCGACAAAACCAGAGGAGGCAGGCATCGTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF zf-CCCH

Protein Analysis

581

Amino Acids

65.34

Weight (kDa)

8.32

Isoelectric Point (pI)

42.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF	PF00806	262 - 293	7.8e-08	Pumilio-family RNA binding repeat
PUF	PF00806	411 - 444	4.1e-06	Pumilio-family RNA binding repeat
PUF	PF00806	483 - 517	5.8e-08	Pumilio-family RNA binding repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004233)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g30780 FvH4_5g30780
malus_domestica	MD05G1093500.v1.1
prunus_persica	Prupe.8G138200_v2.0.a1 Prupe.8G138200_v2.0.a1
pyrus_communis	pycom15g06920
rosa_chinensis	RchiOBHm_Chr6g0254321 RchiOBHm_Chr6g0254351
rosa_laevigata	RLG00000014133 RLG00000014918 RLG00000014919 RLG00000014923 RLG00000014926
rosa_multiflora	Rmu_sc0006565.1_g000002 Rmu_sc0007138.1_g000009 Rmu_sc0027609.1_g000002
rosa_roxburghii	Rroxscaffold_7G00210870 Rroxscaffold_7G00210910 Rroxscaffold_7G00210930
rosa_rugosa	Rorug05G0552000
rosa_samantha	Rh6AG068500 Rh6AG068800 Rh6AG068900 Rh6BG061200 Rh6CG061000 Rh6CG061100 Rh6CG061500 Rh6DG058000 Rh6DG058300 Rh6DG058400 Rh6DG058700
rosa_wichuraiana	Rw6G006000 Rw6G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1072
AccI	GTMKAC	1 cut(s)	1298
AccII	CGCG	2 cut(s)	727, 903
AciI	CCGC	7 cut(s)	595, 690, 725, 727, 1072, 1108, 1133
AclWI	GGATC	6 cut(s)	5, 18, 552, 622, 1355, 1639
AcoI	YGGCCR	1 cut(s)	789
AcsI	RAATTY	4 cut(s)	679, 932, 1183, 1256
AcuI	CTGAAG	2 cut(s)	1136, 1323
AfaI	GTAC	3 cut(s)	121, 434, 1388
AfiI	CCNNNNNNNGG	2 cut(s)	489, 1507
AgsI	TTSAA	8 cut(s)	38, 274, 403, 857, 1079, 1169, 1180, 1580
AjnI	CCWGG	1 cut(s)	1150
AluBI	AGCT	5 cut(s)	266, 342, 907, 1307, 1438
AluI	AGCT	5 cut(s)	266, 342, 907, 1307, 1438
Alw21I	GWGCWC	2 cut(s)	524, 1031
Alw26I	GTCTC	1 cut(s)	389
Alw44I	GTGCAC	1 cut(s)	1027
AlwI	GGATC	6 cut(s)	5, 18, 552, 622, 1355, 1639
Ama87I	CYCGRG	2 cut(s)	1083, 1344
AoxI	GGCC	3 cut(s)	673, 772, 789
ApaLI	GTGCAC	1 cut(s)	1027
ApeKI	GCWGC	2 cut(s)	236, 263
ApoI	RAATTY	4 cut(s)	679, 932, 1183, 1256
ArsI	GACNNNNNNTTYG	2 cut(s)	671, 703
Asp700I	GAANNNNTTC	2 cut(s)	936, 1184
AspLEI	GCGC	1 cut(s)	903
AspS9I	GGNCC	4 cut(s)	221, 674, 772, 975
AsuC2I	CCSGG	1 cut(s)	111
AsuHPI	GGTGA	1 cut(s)	1006
AsuII	TTCGAA	1 cut(s)	446
AvaI	CYCGRG	2 cut(s)	1083, 1344
AvaII	GGWCC	2 cut(s)	221, 975
BaeGI	GKGCMC	1 cut(s)	1031
BalI	TGGCCA	1 cut(s)	791
BamHI	GGATCC	1 cut(s)	10
BauI	CACGAG	1 cut(s)	1410
BbsI	GAAGAC	1 cut(s)	646
Bbv12I	GWGCWC	2 cut(s)	524, 1031
BbvI	GCAGC	2 cut(s)	223, 275
BccI	CCATC	4 cut(s)	78, 838, 966, 1698
BcgI	CGANNNNNNTGC	2 cut(s)	1028, 1062
BciT130I	CCWGG	1 cut(s)	1152
BciVI	GTATCC	1 cut(s)	1633
BclI	TGATCA	4 cut(s)	94, 241, 253, 892
BcnI	CCSGG	1 cut(s)	111
BcoDI	GTCTC	1 cut(s)	389
BfaI	CTAG	5 cut(s)	339, 377, 579, 585, 1226
BfuI	GTATCC	1 cut(s)	1633
BisI	GCNGC	3 cut(s)	237, 264, 728
BlpI	GCTNAGC	3 cut(s)	281, 426, 1136
BlsI	GCNGC	3 cut(s)	238, 265, 729
Bme1390I	CCNGG	2 cut(s)	111, 1152
Bme18I	GGWCC	2 cut(s)	221, 975
BmeT110I	CYCGRG	2 cut(s)	1083, 1344
BmgT120I	GGNCC	4 cut(s)	221, 674, 772, 975
BmiI	GGNNCC	3 cut(s)	12, 668, 773
BmrFI	CCNGG	2 cut(s)	111, 1152
BpiI	GAAGAC	1 cut(s)	646
BpmI	CTGGAG	2 cut(s)	1088, 1533
Bpu10I	CCTNAGC	1 cut(s)	1308
Bpu1102I	GCTNAGC	3 cut(s)	281, 426, 1136
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	1 cut(s)	1001
BpuMI	CCSGG	1 cut(s)	111
Bsa29I	ATCGAT	1 cut(s)	533
BsaJI	CCNNGG	5 cut(s)	352, 670, 725, 1203, 1626
BsaXI	ACNNNNNCTCC	2 cut(s)	511, 541
Bsc4I	CCNNNNNNNGG	2 cut(s)	489, 1507
Bse1I	ACTGG	2 cut(s)	507, 525
Bse3DI	GCAATG	1 cut(s)	364
BseBI	CCWGG	1 cut(s)	1152
BseCI	ATCGAT	1 cut(s)	533
BseDI	CCNNGG	5 cut(s)	352, 670, 725, 1203, 1626
BseGI	GGATG	2 cut(s)	812, 977
BseLI	CCNNNNNNNGG	2 cut(s)	489, 1507
BseMI	GCAATG	1 cut(s)	364
BseMII	CTCAG	7 cut(s)	272, 417, 605, 1127, 1326, 1551, 1619
BseNI	ACTGG	2 cut(s)	507, 525
BseRI	GAGGAG	3 cut(s)	679, 848, 1740
BseSI	GKGCMC	1 cut(s)	1031
BseXI	GCAGC	2 cut(s)	223, 275
BseYI	CCCAGC	1 cut(s)	1146
BsgI	GTGCAG	4 cut(s)	705, 1183, 1403, 1667
Bsh1236I	CGCG	2 cut(s)	727, 903
BshFI	GGCC	3 cut(s)	675, 774, 791
BshVI	ATCGAT	1 cut(s)	533
BsiHKAI	GWGCWC	2 cut(s)	524, 1031
BsiHKCI	CYCGRG	2 cut(s)	1083, 1344
BsiSI	CCGG	1 cut(s)	111
BslFI	GGGAC	4 cut(s)	737, 940, 970, 980
BslI	CCNNNNNNNGG	2 cut(s)	489, 1507
BsmAI	GTCTC	1 cut(s)	389
BsmBI	CGTCTC	1 cut(s)	389
BsmFI	GGGAC	4 cut(s)	737, 940, 970, 980
BsnI	GGCC	3 cut(s)	675, 774, 791
BsoBI	CYCGRG	2 cut(s)	1083, 1344
Bsp119I	TTCGAA	1 cut(s)	446
Bsp1286I	GDGCHC	2 cut(s)	524, 1031
Bsp1720I	GCTNAGC	3 cut(s)	281, 426, 1136
BspACI	CCGC	7 cut(s)	595, 690, 725, 727, 1072, 1108, 1133
BspANI	GGCC	3 cut(s)	675, 774, 791
BspCNI	CTCAG	7 cut(s)	273, 418, 604, 1128, 1327, 1552, 1618
BspDI	ATCGAT	1 cut(s)	533
BspFNI	CGCG	2 cut(s)	727, 903
BspHI	TCATGA	3 cut(s)	226, 250, 889
BspLI	GGNNCC	3 cut(s)	12, 668, 773
BspPI	GGATC	6 cut(s)	5, 18, 552, 622, 1355, 1639
BspT104I	TTCGAA	1 cut(s)	446
BsrBI	CCGCTC	1 cut(s)	1072
BsrDI	GCAATG	1 cut(s)	364
BsrI	ACTGG	2 cut(s)	507, 525
BssECI	CCNNGG	5 cut(s)	352, 670, 725, 1203, 1626
BssNAI	GTATAC	1 cut(s)	1299
BssSI	CACGAG	1 cut(s)	1410
BssT1I	CCWWGG	3 cut(s)	670, 1203, 1626
Bst1107I	GTATAC	1 cut(s)	1299
Bst2BI	CACGAG	1 cut(s)	1410
Bst2UI	CCWGG	1 cut(s)	1152
Bst4CI	ACNGT	5 cut(s)	119, 163, 176, 1095, 1556
Bst6I	CTCTTC	3 cut(s)	654, 756, 843
BstAPI	GCANNNNNTGC	1 cut(s)	1063
BstBI	TTCGAA	1 cut(s)	446
BstC8I	GCNNGC	3 cut(s)	905, 1341, 1733
BstDEI	CTNAG	9 cut(s)	281, 426, 591, 1136, 1270, 1308, 1335, 1560, 1605
BstDSI	CCRYGG	1 cut(s)	725
BstENI	CCTNNNNNAGG	1 cut(s)	1505
BstF5I	GGATG	2 cut(s)	812, 977
BstFNI	CGCG	2 cut(s)	727, 903
BstHHI	GCGC	1 cut(s)	903
BstMAI	GTCTC	1 cut(s)	389
BstMWI	GCNNNNNNNGC	6 cut(s)	306, 632, 652, 788, 1063, 1610
BstNI	CCWGG	1 cut(s)	1152
BstNSI	RCATGY	2 cut(s)	1343, 1526
BstSCI	CCNGG	2 cut(s)	109, 1150
BstSLI	GKGCMC	1 cut(s)	1031
BstUI	CGCG	2 cut(s)	727, 903
BstV1I	GCAGC	2 cut(s)	223, 275
BstV2I	GAAGAC	1 cut(s)	646
BstX2I	RGATCY	3 cut(s)	10, 1360, 1631
BstXI	CCANNNNNNTGG	1 cut(s)	1697
BstYI	RGATCY	3 cut(s)	10, 1360, 1631
BstZ17I	GTATAC	1 cut(s)	1299
Bsu15I	ATCGAT	1 cut(s)	533
BsuI	GTATCC	1 cut(s)	1633
BsuRI	GGCC	3 cut(s)	675, 774, 791
BsuTUI	ATCGAT	1 cut(s)	533
BtgI	CCRYGG	1 cut(s)	725
BtsCI	GGATG	2 cut(s)	812, 977
BtsI	GCAGTG	1 cut(s)	1288
BtsIMutI	CAGTG	3 cut(s)	168, 1029, 1288
Cac8I	GCNNGC	3 cut(s)	905, 1341, 1733
CciI	TCATGA	3 cut(s)	226, 250, 889
CfoI	GCGC	1 cut(s)	903
Cfr13I	GGNCC	4 cut(s)	221, 674, 772, 975
Cfr42I	CCGCGG	1 cut(s)	728
ClaI	ATCGAT	1 cut(s)	533
CseI	GACGC	1 cut(s)	1304
Csp6I	GTAC	3 cut(s)	120, 433, 1387
CspCI	CAANNNNNGTGG	2 cut(s)	33, 68
CviQI	GTAC	3 cut(s)	120, 433, 1387
DdeI	CTNAG	9 cut(s)	281, 426, 591, 1136, 1270, 1308, 1335, 1560, 1605
EaeI	YGGCCR	1 cut(s)	789
Eam1104I	CTCTTC	3 cut(s)	654, 756, 843
EarI	CTCTTC	3 cut(s)	654, 756, 843
EciI	GGCGGA	1 cut(s)	679
Eco130I	CCWWGG	3 cut(s)	670, 1203, 1626
Eco47I	GGWCC	2 cut(s)	221, 975
Eco57I	CTGAAG	2 cut(s)	1136, 1323
Eco88I	CYCGRG	2 cut(s)	1083, 1344
EcoNI	CCTNNNNNAGG	1 cut(s)	1505
EcoO109I	RGGNCCY	1 cut(s)	221
EcoRII	CCWGG	1 cut(s)	1150
EcoT14I	CCWWGG	3 cut(s)	670, 1203, 1626
ErhI	CCWWGG	3 cut(s)	670, 1203, 1626
Esp3I	CGTCTC	1 cut(s)	389
FaqI	GGGAC	4 cut(s)	737, 940, 970, 980
FauI	CCCGC	2 cut(s)	1065, 1101
FbaI	TGATCA	4 cut(s)	94, 241, 253, 892
FblI	GTMKAC	1 cut(s)	1298
Fnu4HI	GCNGC	3 cut(s)	237, 264, 728
FokI	GGATG	2 cut(s)	819, 984
Fsp4HI	GCNGC	3 cut(s)	237, 264, 728
FspBI	CTAG	5 cut(s)	339, 377, 579, 585, 1226
GlaI	GCGC	1 cut(s)	902
GluI	GCNGC	3 cut(s)	237, 264, 728
GsaI	CCCAGC	1 cut(s)	1150
GsuI	CTGGAG	2 cut(s)	1088, 1533
HaeIII	GGCC	3 cut(s)	675, 774, 791
HapII	CCGG	1 cut(s)	111
HgaI	GACGC	1 cut(s)	1304
HhaI	GCGC	1 cut(s)	903
Hin6I	GCGC	1 cut(s)	901
HinP1I	GCGC	1 cut(s)	901
HincII	GTYRAC	1 cut(s)	1654
HindII	GTYRAC	1 cut(s)	1654
HinfI	GANTC	7 cut(s)	247, 274, 448, 493, 1122, 1165, 1347
HpaI	GTTAAC	1 cut(s)	1654
HpaII	CCGG	1 cut(s)	111
HphI	GGTGA	1 cut(s)	1006
Hpy166II	GTNNAC	4 cut(s)	1029, 1299, 1639, 1654
Hpy188I	TCNGA	8 cut(s)	246, 353, 498, 942, 1116, 1357, 1569, 1665
Hpy188III	TCNNGA	8 cut(s)	227, 251, 377, 890, 1193, 1492, 1559, 1712
Hpy8I	GTNNAC	4 cut(s)	1029, 1299, 1639, 1654
HpyAV	CCTTC	1 cut(s)	874
HpyCH4III	ACNGT	5 cut(s)	119, 163, 176, 1095, 1556
HpyCH4IV	ACGT	1 cut(s)	398
HpyF10VI	GCNNNNNNNGC	6 cut(s)	306, 632, 652, 788, 1063, 1610
HpyF3I	CTNAG	9 cut(s)	281, 426, 591, 1136, 1270, 1308, 1335, 1560, 1605
HpySE526I	ACGT	1 cut(s)	398
HspAI	GCGC	1 cut(s)	901
Ksp22I	TGATCA	4 cut(s)	94, 241, 253, 892
KspAI	GTTAAC	1 cut(s)	1654
KspI	CCGCGG	1 cut(s)	728
LmnI	GCTCC	5 cut(s)	519, 666, 1069, 1312, 1665
Lsp1109I	GCAGC	2 cut(s)	223, 275
MaeI	CTAG	5 cut(s)	339, 377, 579, 585, 1226
MaeII	ACGT	1 cut(s)	398
MaeIII	GTNAC	2 cut(s)	176, 1414
MbiI	CCGCTC	1 cut(s)	1072
MflI	RGATCY	3 cut(s)	10, 1360, 1631
MhlI	GDGCHC	2 cut(s)	524, 1031
MlsI	TGGCCA	1 cut(s)	791
MluNI	TGGCCA	1 cut(s)	791
MlyI	GAGTC	2 cut(s)	241, 1356
MmeI	TCCRAC	2 cut(s)	470, 784
Mox20I	TGGCCA	1 cut(s)	791
MroXI	GAANNNNTTC	2 cut(s)	936, 1184
MscI	TGGCCA	1 cut(s)	791
MseI	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1653
MslI	CAYNNNNRTG	1 cut(s)	1695
Msp20I	TGGCCA	1 cut(s)	791
MspA1I	CMGCKG	3 cut(s)	595, 727, 1135
MspI	CCGG	1 cut(s)	111
MspR9I	CCNGG	2 cut(s)	111, 1152
MvaI	CCWGG	1 cut(s)	1152
MvnI	CGCG	2 cut(s)	727, 903
MwoI	GCNNNNNNNGC	6 cut(s)	306, 632, 652, 788, 1063, 1610
NciI	CCSGG	1 cut(s)	111
NlaIV	GGNNCC	3 cut(s)	12, 668, 773
NspI	RCATGY	2 cut(s)	1343, 1526
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	1 cut(s)	1343
PaeR7I	CTCGAG	1 cut(s)	1344
PagI	TCATGA	3 cut(s)	226, 250, 889
PdmI	GAANNNNTTC	2 cut(s)	936, 1184
PfeI	GAWTC	5 cut(s)	274, 448, 493, 1122, 1165
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	3 cut(s)	238, 265, 729
PleI	GAGTC	2 cut(s)	241, 1355
PpsI	GAGTC	2 cut(s)	241, 1355
PpuMI	RGGWCCY	1 cut(s)	221
Psp5II	RGGWCCY	1 cut(s)	221
Psp6I	CCWGG	1 cut(s)	1150
PspFI	CCCAGC	1 cut(s)	1146
PspGI	CCWGG	1 cut(s)	1150
PspN4I	GGNNCC	3 cut(s)	12, 668, 773
PspPI	GGNCC	4 cut(s)	221, 674, 772, 975
PspPPI	RGGWCCY	1 cut(s)	221
PspXI	VCTCGAGB	1 cut(s)	1344
PsuI	RGATCY	3 cut(s)	10, 1360, 1631
RsaI	GTAC	3 cut(s)	121, 434, 1388
RsaNI	GTAC	3 cut(s)	120, 433, 1387
RseI	CAYNNNNRTG	1 cut(s)	1695
SacII	CCGCGG	1 cut(s)	728
SaqAI	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1653
SatI	GCNGC	3 cut(s)	237, 264, 728
Sau96I	GGNCC	4 cut(s)	221, 674, 772, 975
SchI	GAGTC	2 cut(s)	241, 1356
ScrFI	CCNGG	2 cut(s)	111, 1152
SduI	GDGCHC	2 cut(s)	524, 1031
Sfr274I	CTCGAG	1 cut(s)	1344
Sfr303I	CCGCGG	1 cut(s)	728
SfuI	TTCGAA	1 cut(s)	446
SgrBI	CCGCGG	1 cut(s)	728
SinI	GGWCC	2 cut(s)	221, 975
SlaI	CTCGAG	1 cut(s)	1344
SmiMI	CAYNNNNRTG	1 cut(s)	1695
SmlI	CTYRAG	2 cut(s)	1016, 1344
SmoI	CTYRAG	2 cut(s)	1016, 1344
SphI	GCATGC	1 cut(s)	1343
SsiI	CCGC	7 cut(s)	595, 690, 725, 727, 1072, 1108, 1133
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	5 cut(s)	339, 377, 579, 585, 1226
StyD4I	CCNGG	2 cut(s)	109, 1150
StyI	CCWWGG	3 cut(s)	670, 1203, 1626
TaaI	ACNGT	5 cut(s)	119, 163, 176, 1095, 1556
TaiI	ACGT	1 cut(s)	401
TaqI	TCGA	9 cut(s)	158, 191, 446, 533, 811, 1345, 1463, 1491, 1713
TatI	WGTACW	2 cut(s)	432, 1386
TauI	GCSGC	1 cut(s)	730
TfiI	GAWTC	5 cut(s)	274, 448, 493, 1122, 1165
Tru1I	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1653
Tru9I	TTAA	8 cut(s)	171, 419, 564, 867, 1455, 1539, 1551, 1653
TscAI	CASTG	3 cut(s)	168, 1036, 1288
TseI	GCWGC	2 cut(s)	236, 263
TspDTI	ATGAA	2 cut(s)	893, 1481
TspGWI	ACGGA	1 cut(s)	984
TspRI	CASTG	3 cut(s)	168, 1036, 1288
VneI	GTGCAC	1 cut(s)	1027
VpaK11BI	GGWCC	2 cut(s)	221, 975
XagI	CCTNNNNNAGG	1 cut(s)	1505
XapI	RAATTY	4 cut(s)	679, 932, 1183, 1256
XbaI	TCTAGA	1 cut(s)	376
XceI	RCATGY	2 cut(s)	1343, 1526
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1210
XhoI	CTCGAG	1 cut(s)	1344
XmiI	GTMKAC	1 cut(s)	1298
XmnI	GAANNNNTTC	2 cut(s)	936, 1184
XspI	CTAG	5 cut(s)	339, 377, 579, 585, 1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.