Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004233

Physical Location & Seq

Genomic Coordinates Forward (+)

61307179 .. 61309800

Gene Structure 2622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00210870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGTCGATTGCCATGGTGGGTGAGCTCTGCAATTGTCGACCGAAAGGGTCCGTCGTCAGGTTTATTTCATGGAATACCACCTTCATCAAAACCCTCCACCTCCCCCTCCGTCTCAAAATCAGATGTATTGGGATCCCATGTTGCCCAATCTCGTTCTTCAAAACCCACCAATCTTGCAAAACCCTCCCTACCATCAAAACACTAATCCCAACTTTGATCATCTTCTTTTTTCCCGGAAACAGTACCAACAATCTTATCAACAACAATAATAATGAGTTTTCGACAGTGGGATTTAACAGTAACAATGAGTTTTCGACATTGGGATTTGGAACAGGTGGGGGAGGTCCTCATGATTTTGTTGCTGATCAGACTCATGATCAACTCGCAGCTTCTTTGAATCGGCTGAGCATATCCAATAATGGCAGTTCAGGCAATCAAAGAATACCCAACAACTATATGCCTAGCTCTACGATCCTAGGCAATGGTGGGTTCAGTACTCTAGAGCAGGAATATTTGGAGACGTTGAACCAATATGCTTTCTTAATGGCTGAGCAGTACATGAGGCGTTCGAATCCCACTACTGCTAACAATGGAATACTCAATCCCCATAGTTGGAATCGGAATAGCACCAGTAGTAGTAGGAGCACTAGTCAATCGATTTATGGGGATCAATTTGGATTTAGTTTTAACCAAATTAGGTCTAGTTCTAGTTCTCAGCGGAATGGGGTTAGCAGGGGATCAAGGTTTGCTAACGGGGCTGGAAGACAGCGTTTCGGGCAAGAACAAAGGAGCCAAGACCCCGAATTTGATGCCCCCAAAGATCAAAGGCTTGGCAATGGGTCTGCACGGCGGCATATACCAAGTTATTACTCTGTCCCTTTGGAAGAGTTGAGGGGCCAAATTGCTTTTGTGGCCAAAGATCATGTTGGATGTCGATTTTTACAAAAGAAGATTGAGGAGGGTAAGATGGAAGAGATTGAAATGATTTTTAATGAGGTTATGAAGGAGGGTCATGATCATTTGCGCGAGCTAATGGTAGATCAATTTGGGACTGAATTTATTCAGAAACTTGTGGAGGGGACTAACAGGGACGGATGGACCAAAATGCTTGATTTGGTGATGAGTGATGAGAGGAAACTCAAGGATATGTGCACTGACCAGCATGGAAGTCGTGCCATGCAGAAGTTGCTGGAGCGGGTTGAAACCCGAGAGCAACAGTCCTCGTTTATGCGGGTTCTGAAGCGAATCACAATTCCGCTGAGCAAAACCCAGCCTGGTTATTATGTGATTCAAGTTTGCTTGAAAAATTTCTCTCCTGACTGCACCAAGGGTGTTCTGGAATTAGTGCTAGATAACTGCCTTGCATTAGCAAAAGACAAATTTGGGTGTTGCTTAGTACAAAGCAGTGTGCATTATGCGTATACTGAAGCCAAGGAGCGTCTTGTGGCTGACATAACTGAGCATGCTCGAGTTCTCTCCGAAGATCCTTACGGGTTTGTCTTTCACTCTAATTTTGTGACGATAGATTTATTTGAATCACATTTACGTACTAACGTTTTATTGAACATCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF zf-CCCH

Protein Analysis

524

Amino Acids

59.09

Weight (kDa)

8.48

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF	PF00806	303 - 334	6.9e-08	Pumilio-family RNA binding repeat
PUF	PF00806	452 - 485	3.6e-06	Pumilio-family RNA binding repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004233)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g30780 FvH4_5g30780
malus_domestica	MD05G1093500.v1.1
prunus_persica	Prupe.8G138200_v2.0.a1 Prupe.8G138200_v2.0.a1
pyrus_communis	pycom15g06920
rosa_chinensis	RchiOBHm_Chr6g0254321 RchiOBHm_Chr6g0254351
rosa_laevigata	RLG00000014133 RLG00000014918 RLG00000014919 RLG00000014923 RLG00000014926
rosa_multiflora	Rmu_sc0006565.1_g000002 Rmu_sc0007138.1_g000009 Rmu_sc0027609.1_g000002
rosa_roxburghii	Rroxscaffold_7G00210870 Rroxscaffold_7G00210910 Rroxscaffold_7G00210930
rosa_rugosa	Rorug05G0552000
rosa_samantha	Rh6AG068500 Rh6AG068800 Rh6AG068900 Rh6BG061200 Rh6CG061000 Rh6CG061100 Rh6CG061500 Rh6DG058000 Rh6DG058300 Rh6DG058400 Rh6DG058700
rosa_wichuraiana	Rw6G006000 Rw6G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1195
AccI	GTMKAC	2 cut(s)	37, 1421
AccII	CGCG	1 cut(s)	1026
AciI	CCGC	5 cut(s)	718, 850, 1195, 1231, 1256
AclI	AACGTT	1 cut(s)	1554
AclWI	GGATC	6 cut(s)	127, 140, 466, 675, 745, 1478
AcoI	YGGCCR	1 cut(s)	912
AcsI	RAATTY	4 cut(s)	803, 1055, 1306, 1379
AcuI	CTGAAG	2 cut(s)	1259, 1446
AfaI	GTAC	5 cut(s)	244, 496, 557, 1398, 1549
AfiI	CCNNNNNNNGG	2 cut(s)	57, 612
AgsI	TTSAA	9 cut(s)	160, 397, 526, 980, 1202, 1292, 1303, 1535, 1564
AhlI	ACTAGT	1 cut(s)	647
AjnI	CCWGG	1 cut(s)	1273
AluBI	AGCT	4 cut(s)	25, 389, 465, 1030
AluI	AGCT	4 cut(s)	25, 389, 465, 1030
Alw21I	GWGCWC	3 cut(s)	27, 647, 1154
Alw26I	GTCTC	2 cut(s)	116, 512
Alw44I	GTGCAC	1 cut(s)	1150
AlwI	GGATC	6 cut(s)	127, 140, 466, 675, 745, 1478
Ama87I	CYCGRG	2 cut(s)	1206, 1467
AoxI	GGCC	2 cut(s)	895, 912
ApaLI	GTGCAC	1 cut(s)	1150
ApeKI	GCWGC	1 cut(s)	386
ApoI	RAATTY	4 cut(s)	803, 1055, 1306, 1379
ArsI	GACNNNNNNTTYG	2 cut(s)	788, 820
Asp700I	GAANNNNTTC	2 cut(s)	1059, 1307
AspA2I	CCTAGG	1 cut(s)	475
AspLEI	GCGC	1 cut(s)	1026
AspS9I	GGNCC	4 cut(s)	48, 344, 895, 1098
AsuC2I	CCSGG	1 cut(s)	234
AsuHPI	GGTGA	2 cut(s)	32, 1129
AsuII	TTCGAA	1 cut(s)	569
AvaI	CYCGRG	2 cut(s)	1206, 1467
AvaII	GGWCC	3 cut(s)	48, 344, 1098
AvrII	CCTAGG	1 cut(s)	475
BaeGI	GKGCMC	1 cut(s)	1154
BalI	TGGCCA	1 cut(s)	914
BamHI	GGATCC	1 cut(s)	132
BanII	GRGCYC	1 cut(s)	27
BbsI	GAAGAC	1 cut(s)	769
Bbv12I	GWGCWC	3 cut(s)	27, 647, 1154
BbvI	GCAGC	1 cut(s)	398
BccI	CCATC	3 cut(s)	200, 961, 1089
BceAI	ACGGC	1 cut(s)	863
BcgI	CGANNNNNNTGC	4 cut(s)	791, 825, 1151, 1185
BciT130I	CCWGG	1 cut(s)	1275
BclI	TGATCA	4 cut(s)	216, 364, 376, 1015
BcnI	CCSGG	1 cut(s)	234
BcoDI	GTCTC	2 cut(s)	116, 512
BcuI	ACTAGT	1 cut(s)	647
BfaI	CTAG	7 cut(s)	462, 476, 500, 648, 702, 708, 1349
BisI	GCNGC	2 cut(s)	387, 851
BlnI	CCTAGG	1 cut(s)	475
BlpI	GCTNAGC	3 cut(s)	404, 549, 1259
BlsI	GCNGC	2 cut(s)	388, 852
BmcAI	AGTACT	1 cut(s)	496
Bme1390I	CCNGG	2 cut(s)	234, 1275
Bme18I	GGWCC	3 cut(s)	48, 344, 1098
BmeT110I	CYCGRG	2 cut(s)	1206, 1467
BmgT120I	GGNCC	4 cut(s)	48, 344, 895, 1098
BmiI	GGNNCC	4 cut(s)	49, 134, 791, 896
BmrFI	CCNGG	2 cut(s)	234, 1275
BmsI	GCATC	1 cut(s)	799
BpiI	GAAGAC	1 cut(s)	769
BpmI	CTGGAG	1 cut(s)	1211
Bpu1102I	GCTNAGC	3 cut(s)	404, 549, 1259
Bpu14I	TTCGAA	1 cut(s)	569
BpuEI	CTTGAG	1 cut(s)	1124
BpuMI	CCSGG	1 cut(s)	234
Bsa29I	ATCGAT	1 cut(s)	656
BsaAI	YACGTR	1 cut(s)	1547
BsaJI	CCNNGG	4 cut(s)	12, 475, 1326, 1431
BsaXI	ACNNNNNCTCC	2 cut(s)	634, 664
Bsc4I	CCNNNNNNNGG	2 cut(s)	57, 612
Bse1I	ACTGG	1 cut(s)	630
Bse3DI	GCAATG	2 cut(s)	487, 841
BseBI	CCWGG	1 cut(s)	1275
BseCI	ATCGAT	1 cut(s)	656
BseDI	CCNNGG	4 cut(s)	12, 475, 1326, 1431
BseGI	GGATG	2 cut(s)	935, 1100
BseLI	CCNNNNNNNGG	2 cut(s)	57, 612
BseMI	GCAATG	2 cut(s)	487, 841
BseMII	CTCAG	5 cut(s)	395, 540, 728, 1250, 1449
BseNI	ACTGG	1 cut(s)	630
BseRI	GAGGAG	1 cut(s)	971
BseSI	GKGCMC	1 cut(s)	1154
BseXI	GCAGC	1 cut(s)	398
BseYI	CCCAGC	1 cut(s)	1269
BsgI	GTGCAG	2 cut(s)	828, 1306
Bsh1236I	CGCG	1 cut(s)	1026
Bsh1285I	CGRYCG	1 cut(s)	41
BshFI	GGCC	2 cut(s)	897, 914
BshVI	ATCGAT	1 cut(s)	656
BsiEI	CGRYCG	1 cut(s)	41
BsiHKAI	GWGCWC	3 cut(s)	27, 647, 1154
BsiHKCI	CYCGRG	2 cut(s)	1206, 1467
BsiSI	CCGG	1 cut(s)	234
BslFI	GGGAC	4 cut(s)	860, 1063, 1093, 1103
BslI	CCNNNNNNNGG	2 cut(s)	57, 612
BsmAI	GTCTC	2 cut(s)	116, 512
BsmBI	CGTCTC	2 cut(s)	116, 512
BsmFI	GGGAC	4 cut(s)	860, 1063, 1093, 1103
BsnI	GGCC	2 cut(s)	897, 914
BsoBI	CYCGRG	2 cut(s)	1206, 1467
Bsp119I	TTCGAA	1 cut(s)	569
Bsp1286I	GDGCHC	3 cut(s)	27, 647, 1154
Bsp1720I	GCTNAGC	3 cut(s)	404, 549, 1259
Bsp19I	CCATGG	1 cut(s)	12
BspACI	CCGC	5 cut(s)	718, 850, 1195, 1231, 1256
BspANI	GGCC	2 cut(s)	897, 914
BspCNI	CTCAG	5 cut(s)	396, 541, 727, 1251, 1450
BspDI	ATCGAT	1 cut(s)	656
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	3 cut(s)	349, 373, 1012
BspLI	GGNNCC	4 cut(s)	49, 134, 791, 896
BspPI	GGATC	6 cut(s)	127, 140, 466, 675, 745, 1478
BspT104I	TTCGAA	1 cut(s)	569
BsrBI	CCGCTC	1 cut(s)	1195
BsrDI	GCAATG	2 cut(s)	487, 841
BsrI	ACTGG	1 cut(s)	630
BssECI	CCNNGG	4 cut(s)	12, 475, 1326, 1431
BssNAI	GTATAC	1 cut(s)	1422
BssT1I	CCWWGG	4 cut(s)	12, 475, 1326, 1431
Bst1107I	GTATAC	1 cut(s)	1422
Bst2UI	CCWGG	1 cut(s)	1275
Bst4CI	ACNGT	4 cut(s)	242, 286, 299, 1218
Bst6I	CTCTTC	2 cut(s)	879, 966
BstAPI	GCANNNNNTGC	1 cut(s)	1186
BstBAI	YACGTR	1 cut(s)	1547
BstBI	TTCGAA	1 cut(s)	569
BstC8I	GCNNGC	2 cut(s)	1028, 1464
BstDEI	CTNAG	6 cut(s)	404, 549, 714, 1259, 1393, 1458
BstDSI	CCRYGG	1 cut(s)	12
BstF5I	GGATG	2 cut(s)	935, 1100
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	1 cut(s)	1026
BstMAI	GTCTC	2 cut(s)	116, 512
BstMCI	CGRYCG	1 cut(s)	41
BstMWI	GCNNNNNNNGC	5 cut(s)	429, 755, 775, 911, 1186
BstNI	CCWGG	1 cut(s)	1275
BstNSI	RCATGY	1 cut(s)	1466
BstSCI	CCNGG	2 cut(s)	232, 1273
BstSLI	GKGCMC	1 cut(s)	1154
BstSNI	TACGTA	1 cut(s)	1547
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	1 cut(s)	398
BstV2I	GAAGAC	1 cut(s)	769
BstX2I	RGATCY	2 cut(s)	132, 1483
BstYI	RGATCY	2 cut(s)	132, 1483
BstZ17I	GTATAC	1 cut(s)	1422
Bsu15I	ATCGAT	1 cut(s)	656
BsuRI	GGCC	2 cut(s)	897, 914
BsuTUI	ATCGAT	1 cut(s)	656
BtgI	CCRYGG	1 cut(s)	12
BtsCI	GGATG	2 cut(s)	935, 1100
BtsI	GCAGTG	1 cut(s)	1411
BtsIMutI	CAGTG	3 cut(s)	291, 1152, 1411
Cac8I	GCNNGC	2 cut(s)	1028, 1464
CciI	TCATGA	3 cut(s)	349, 373, 1012
CfoI	GCGC	1 cut(s)	1026
Cfr13I	GGNCC	4 cut(s)	48, 344, 895, 1098
ClaI	ATCGAT	1 cut(s)	656
CseI	GACGC	1 cut(s)	1427
Csp6I	GTAC	5 cut(s)	243, 495, 556, 1397, 1548
CspCI	CAANNNNNGTGG	2 cut(s)	155, 190
CviQI	GTAC	5 cut(s)	243, 495, 556, 1397, 1548
DdeI	CTNAG	6 cut(s)	404, 549, 714, 1259, 1393, 1458
EaeI	YGGCCR	1 cut(s)	912
Eam1104I	CTCTTC	2 cut(s)	879, 966
EarI	CTCTTC	2 cut(s)	879, 966
Ecl136II	GAGCTC	1 cut(s)	25
Eco105I	TACGTA	1 cut(s)	1547
Eco130I	CCWWGG	4 cut(s)	12, 475, 1326, 1431
Eco24I	GRGCYC	1 cut(s)	27
Eco47I	GGWCC	3 cut(s)	48, 344, 1098
Eco53kI	GAGCTC	1 cut(s)	25
Eco57I	CTGAAG	2 cut(s)	1259, 1446
Eco88I	CYCGRG	2 cut(s)	1206, 1467
EcoICRI	GAGCTC	1 cut(s)	25
EcoO109I	RGGNCCY	1 cut(s)	344
EcoRII	CCWGG	1 cut(s)	1273
EcoT14I	CCWWGG	4 cut(s)	12, 475, 1326, 1431
EcoT38I	GRGCYC	1 cut(s)	27
ErhI	CCWWGG	4 cut(s)	12, 475, 1326, 1431
Esp3I	CGTCTC	2 cut(s)	116, 512
FaqI	GGGAC	4 cut(s)	860, 1063, 1093, 1103
FauI	CCCGC	2 cut(s)	1188, 1224
FbaI	TGATCA	4 cut(s)	216, 364, 376, 1015
FblI	GTMKAC	2 cut(s)	37, 1421
Fnu4HI	GCNGC	2 cut(s)	387, 851
FokI	GGATG	2 cut(s)	942, 1107
FriOI	GRGCYC	1 cut(s)	27
Fsp4HI	GCNGC	2 cut(s)	387, 851
FspBI	CTAG	7 cut(s)	462, 476, 500, 648, 702, 708, 1349
GlaI	GCGC	1 cut(s)	1025
GluI	GCNGC	2 cut(s)	387, 851
GsaI	CCCAGC	1 cut(s)	1273
GsuI	CTGGAG	1 cut(s)	1211
HaeIII	GGCC	2 cut(s)	897, 914
HapII	CCGG	1 cut(s)	234
HgaI	GACGC	1 cut(s)	1427
HhaI	GCGC	1 cut(s)	1026
Hin6I	GCGC	1 cut(s)	1024
HinP1I	GCGC	1 cut(s)	1024
HincII	GTYRAC	1 cut(s)	38
HindII	GTYRAC	1 cut(s)	38
HinfI	GANTC	7 cut(s)	370, 397, 571, 616, 1245, 1288, 1535
HpaII	CCGG	1 cut(s)	234
HphI	GGTGA	2 cut(s)	32, 1129
Hpy166II	GTNNAC	3 cut(s)	38, 1152, 1422
Hpy188I	TCNGA	6 cut(s)	122, 369, 621, 1065, 1239, 1480
Hpy188III	TCNNGA	6 cut(s)	350, 374, 500, 1013, 1316, 1337
Hpy8I	GTNNAC	3 cut(s)	38, 1152, 1422
Hpy99I	CGWCG	1 cut(s)	56
HpyAV	CCTTC	2 cut(s)	91, 997
HpyCH4III	ACNGT	4 cut(s)	242, 286, 299, 1218
HpyCH4IV	ACGT	3 cut(s)	521, 1546, 1554
HpyCH4V	TGCA	8 cut(s)	30, 177, 845, 1152, 1180, 1323, 1364, 1411
HpyF10VI	GCNNNNNNNGC	5 cut(s)	429, 755, 775, 911, 1186
HpyF3I	CTNAG	6 cut(s)	404, 549, 714, 1259, 1393, 1458
HpySE526I	ACGT	3 cut(s)	521, 1546, 1554
HspAI	GCGC	1 cut(s)	1024
Ksp22I	TGATCA	4 cut(s)	216, 364, 376, 1015
LmnI	GCTCC	4 cut(s)	642, 789, 1192, 1435
Lsp1109I	GCAGC	1 cut(s)	398
LweI	GCATC	1 cut(s)	799
MaeI	CTAG	7 cut(s)	462, 476, 500, 648, 702, 708, 1349
MaeII	ACGT	3 cut(s)	521, 1546, 1554
MaeIII	GTNAC	2 cut(s)	299, 1516
MbiI	CCGCTC	1 cut(s)	1195
MboII	GAAGA	7 cut(s)	148, 214, 774, 896, 961, 983, 1493
MfeI	CAATTG	1 cut(s)	31
MflI	RGATCY	2 cut(s)	132, 1483
MhlI	GDGCHC	3 cut(s)	27, 647, 1154
MlsI	TGGCCA	1 cut(s)	914
MluNI	TGGCCA	1 cut(s)	914
MlyI	GAGTC	1 cut(s)	364
MmeI	TCCRAC	2 cut(s)	593, 907
Mox20I	TGGCCA	1 cut(s)	914
MroXI	GAANNNNTTC	2 cut(s)	1059, 1307
MscI	TGGCCA	1 cut(s)	914
MseI	TTAA	5 cut(s)	294, 542, 687, 990, 1573
Msp20I	TGGCCA	1 cut(s)	914
MspA1I	CMGCKG	2 cut(s)	718, 1258
MspI	CCGG	1 cut(s)	234
MspR9I	CCNGG	2 cut(s)	234, 1275
MunI	CAATTG	1 cut(s)	31
MvaI	CCWGG	1 cut(s)	1275
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	5 cut(s)	429, 755, 775, 911, 1186
NciI	CCSGG	1 cut(s)	234
NcoI	CCATGG	1 cut(s)	12
NlaIV	GGNNCC	4 cut(s)	49, 134, 791, 896
NmuCI	GTSAC	1 cut(s)	1516
NspI	RCATGY	1 cut(s)	1466
NspV	TTCGAA	1 cut(s)	569
PaeI	GCATGC	1 cut(s)	1466
PaeR7I	CTCGAG	1 cut(s)	1467
PagI	TCATGA	3 cut(s)	349, 373, 1012
PdmI	GAANNNNTTC	2 cut(s)	1059, 1307
PfeI	GAWTC	6 cut(s)	397, 571, 616, 1245, 1288, 1535
PfoI	TCCNGGA	1 cut(s)	232
PkrI	GCNGC	2 cut(s)	388, 852
PleI	GAGTC	1 cut(s)	364
PpsI	GAGTC	1 cut(s)	364
Ppu21I	YACGTR	1 cut(s)	1547
PpuMI	RGGWCCY	1 cut(s)	344
Psp124BI	GAGCTC	1 cut(s)	27
Psp1406I	AACGTT	1 cut(s)	1554
Psp5II	RGGWCCY	1 cut(s)	344
Psp6I	CCWGG	1 cut(s)	1273
PspFI	CCCAGC	1 cut(s)	1269
PspGI	CCWGG	1 cut(s)	1273
PspN4I	GGNNCC	4 cut(s)	49, 134, 791, 896
PspPI	GGNCC	4 cut(s)	48, 344, 895, 1098
PspPPI	RGGWCCY	1 cut(s)	344
PspXI	VCTCGAGB	1 cut(s)	1467
PsuI	RGATCY	2 cut(s)	132, 1483
RsaI	GTAC	5 cut(s)	244, 496, 557, 1398, 1549
RsaNI	GTAC	5 cut(s)	243, 495, 556, 1397, 1548
SacI	GAGCTC	1 cut(s)	27
SalI	GTCGAC	1 cut(s)	36
SaqAI	TTAA	5 cut(s)	294, 542, 687, 990, 1573
SatI	GCNGC	2 cut(s)	387, 851
Sau96I	GGNCC	4 cut(s)	48, 344, 895, 1098
ScaI	AGTACT	1 cut(s)	496
SchI	GAGTC	1 cut(s)	364
ScrFI	CCNGG	2 cut(s)	234, 1275
SduI	GDGCHC	3 cut(s)	27, 647, 1154
SfaNI	GCATC	1 cut(s)	799
Sfr274I	CTCGAG	1 cut(s)	1467
SfuI	TTCGAA	1 cut(s)	569
SinI	GGWCC	3 cut(s)	48, 344, 1098
SlaI	CTCGAG	1 cut(s)	1467
SmlI	CTYRAG	2 cut(s)	1139, 1467
SmoI	CTYRAG	2 cut(s)	1139, 1467
SnaBI	TACGTA	1 cut(s)	1547
SpeI	ACTAGT	1 cut(s)	647
SphI	GCATGC	1 cut(s)	1466
SsiI	CCGC	5 cut(s)	718, 850, 1195, 1231, 1256
SspI	AATATT	1 cut(s)	512
SspMI	CTAG	7 cut(s)	462, 476, 500, 648, 702, 708, 1349
SstI	GAGCTC	1 cut(s)	27
StyD4I	CCNGG	2 cut(s)	232, 1273
StyI	CCWWGG	4 cut(s)	12, 475, 1326, 1431
TaaI	ACNGT	4 cut(s)	242, 286, 299, 1218
TaiI	ACGT	3 cut(s)	524, 1549, 1557
TaqI	TCGA	8 cut(s)	5, 37, 281, 314, 569, 656, 934, 1468
TaqII	GACCGA	1 cut(s)	55
TatI	WGTACW	3 cut(s)	494, 555, 1396
TauI	GCSGC	1 cut(s)	853
TfiI	GAWTC	6 cut(s)	397, 571, 616, 1245, 1288, 1535
Tru1I	TTAA	5 cut(s)	294, 542, 687, 990, 1573
Tru9I	TTAA	5 cut(s)	294, 542, 687, 990, 1573
TscAI	CASTG	3 cut(s)	291, 1159, 1411
TseFI	GTSAC	1 cut(s)	1516
TseI	GCWGC	1 cut(s)	386
Tsp45I	GTSAC	1 cut(s)	1516
TspDTI	ATGAA	3 cut(s)	57, 73, 1016
TspGWI	ACGGA	3 cut(s)	40, 98, 1107
TspRI	CASTG	3 cut(s)	291, 1159, 1411
VneI	GTGCAC	1 cut(s)	1150
VpaK11BI	GGWCC	3 cut(s)	48, 344, 1098
XapI	RAATTY	4 cut(s)	803, 1055, 1306, 1379
XbaI	TCTAGA	1 cut(s)	499
XceI	RCATGY	1 cut(s)	1466
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1333
XhoI	CTCGAG	1 cut(s)	1467
XmaJI	CCTAGG	1 cut(s)	475
XmiI	GTMKAC	2 cut(s)	37, 1421
XmnI	GAANNNNTTC	2 cut(s)	1059, 1307
XspI	CTAG	7 cut(s)	462, 476, 500, 648, 702, 708, 1349
ZrmI	AGTACT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.