Belongs to the cyclin family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1225700.v1.1 MD05G1225900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0350291 RchiOBHm_Chr3g0465941 RchiOBHm_Chr6g0256401 RchiOBHm_Chr7g0217151 RchiOBHm_Chr7g0219351 |
| rosa_laevigata | RLG00000009798 RLG00000014784 RLG00000017295 RLG00000024613 |
| rosa_roxburghii | Rroxscaffold_5G00337830 Rroxscaffold_6G00414880 Rroxscaffold_7G00190630 |
| rosa_rugosa | Rorug01G0468500 |
| rosa_samantha | Rh3BG145700 Rh3CG146800 Rh3DG235900 Rh6AG082200 Rh7AG228100 Rh7CG242600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 232 |
| Acc36I | ACCTGC | 1 cut(s) | 139 |
| AccII | CGCG | 1 cut(s) | 153 |
| AciI | CCGC | 1 cut(s) | 153 |
| AcuI | CTGAAG | 1 cut(s) | 341 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 392 |
| AgsI | TTSAA | 2 cut(s) | 127, 407 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 271, 303 |
| AluBI | AGCT | 3 cut(s) | 185, 259, 287 |
| AluI | AGCT | 3 cut(s) | 185, 259, 287 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 259 |
| ApeKI | GCWGC | 2 cut(s) | 134, 185 |
| AspLEI | GCGC | 1 cut(s) | 233 |
| BbvI | GCAGC | 2 cut(s) | 146, 172 |
| BfmI | CTRYAG | 1 cut(s) | 132 |
| BfuAI | ACCTGC | 1 cut(s) | 139 |
| BisI | GCNGC | 3 cut(s) | 135, 154, 186 |
| BlsI | GCNGC | 3 cut(s) | 136, 155, 187 |
| BmsI | GCATC | 1 cut(s) | 165 |
| BpmI | CTGGAG | 1 cut(s) | 201 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 90, 120 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 392 |
| Bse1I | ACTGG | 1 cut(s) | 204 |
| BseGI | GGATG | 3 cut(s) | 200, 301, 367 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 392 |
| BseNI | ACTGG | 1 cut(s) | 204 |
| BseRI | GAGGAG | 1 cut(s) | 358 |
| BseXI | GCAGC | 2 cut(s) | 146, 172 |
| Bsh1236I | CGCG | 1 cut(s) | 153 |
| BslFI | GGGAC | 1 cut(s) | 411 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 392 |
| BsmFI | GGGAC | 1 cut(s) | 411 |
| BsmI | GAATGC | 2 cut(s) | 122, 326 |
| BspACI | CCGC | 1 cut(s) | 153 |
| BspFNI | CGCG | 1 cut(s) | 153 |
| BspMAI | CTGCAG | 1 cut(s) | 136 |
| BspMI | ACCTGC | 1 cut(s) | 139 |
| BsrI | ACTGG | 1 cut(s) | 204 |
| Bst4CI | ACNGT | 1 cut(s) | 62 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 27 |
| BstC8I | GCNNGC | 3 cut(s) | 120, 261, 270 |
| BstF5I | GGATG | 3 cut(s) | 200, 301, 367 |
| BstFNI | CGCG | 1 cut(s) | 153 |
| BstHHI | GCGC | 1 cut(s) | 233 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 27, 185, 265, 269, 323 |
| BstSFI | CTRYAG | 1 cut(s) | 132 |
| BstUI | CGCG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 2 cut(s) | 146, 172 |
| BtsCI | GGATG | 3 cut(s) | 200, 301, 367 |
| BveI | ACCTGC | 1 cut(s) | 139 |
| Cac8I | GCNNGC | 3 cut(s) | 120, 261, 270 |
| CaiI | CAGNNNCTG | 1 cut(s) | 259 |
| CfoI | GCGC | 1 cut(s) | 233 |
| CviJI | RGCY | 6 cut(s) | 179, 185, 259, 263, 287, 317 |
| CviKI_1 | RGCY | 6 cut(s) | 179, 185, 259, 263, 287, 317 |
| Eco57I | CTGAAG | 1 cut(s) | 341 |
| EcoT22I | ATGCAT | 1 cut(s) | 328 |
| FaiI | YATR | 8 cut(s) | 23, 32, 93, 95, 229, 339, 391, 393 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 10, 42 |
| FaqI | GGGAC | 1 cut(s) | 411 |
| FauNDI | CATATG | 1 cut(s) | 391 |
| Fnu4HI | GCNGC | 3 cut(s) | 135, 154, 186 |
| FokI | GGATG | 3 cut(s) | 187, 308, 374 |
| Fsp4HI | GCNGC | 3 cut(s) | 135, 154, 186 |
| FspAI | RTGCGCAY | 1 cut(s) | 232 |
| FspI | TGCGCA | 1 cut(s) | 232 |
| GlaI | GCGC | 1 cut(s) | 232 |
| GluI | GCNGC | 3 cut(s) | 135, 154, 186 |
| GsuI | CTGGAG | 1 cut(s) | 201 |
| HhaI | GCGC | 1 cut(s) | 233 |
| Hin6I | GCGC | 1 cut(s) | 231 |
| HinP1I | GCGC | 1 cut(s) | 231 |
| HinfI | GANTC | 1 cut(s) | 250 |
| Hpy166II | GTNNAC | 2 cut(s) | 214, 383 |
| Hpy188I | TCNGA | 1 cut(s) | 255 |
| Hpy188III | TCNNGA | 2 cut(s) | 167, 359 |
| Hpy8I | GTNNAC | 2 cut(s) | 214, 383 |
| HpyAV | CCTTC | 1 cut(s) | 396 |
| HpyCH4III | ACNGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 4 cut(s) | 30, 134, 326, 411 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 27, 185, 265, 269, 323 |
| HspAI | GCGC | 1 cut(s) | 231 |
| LmnI | GCTCC | 1 cut(s) | 182 |
| Lsp1109I | GCAGC | 2 cut(s) | 146, 172 |
| LweI | GCATC | 1 cut(s) | 165 |
| MaeIII | GTNAC | 2 cut(s) | 56, 364 |
| MluCI | AATT | 1 cut(s) | 224 |
| MlyI | GAGTC | 1 cut(s) | 259 |
| MnlI | CCTC | 3 cut(s) | 307, 336, 339 |
| Mph1103I | ATGCAT | 1 cut(s) | 328 |
| MseI | TTAA | 1 cut(s) | 221 |
| Mva1269I | GAATGC | 2 cut(s) | 122, 326 |
| MvnI | CGCG | 1 cut(s) | 153 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 27, 185, 265, 269, 323 |
| NdeI | CATATG | 1 cut(s) | 391 |
| NmuCI | GTSAC | 1 cut(s) | 56 |
| NsbI | TGCGCA | 1 cut(s) | 232 |
| NsiI | ATGCAT | 1 cut(s) | 328 |
| PctI | GAATGC | 2 cut(s) | 122, 326 |
| PkrI | GCNGC | 3 cut(s) | 136, 155, 187 |
| PleI | GAGTC | 1 cut(s) | 258 |
| PpsI | GAGTC | 1 cut(s) | 258 |
| PstI | CTGCAG | 1 cut(s) | 136 |
| PstNI | CAGNNNCTG | 1 cut(s) | 259 |
| SaqAI | TTAA | 1 cut(s) | 221 |
| SatI | GCNGC | 3 cut(s) | 135, 154, 186 |
| SchI | GAGTC | 1 cut(s) | 259 |
| SetI | ASST | 6 cut(s) | 133, 187, 213, 261, 289, 388 |
| SfaNI | GCATC | 1 cut(s) | 165 |
| SfcI | CTRYAG | 1 cut(s) | 132 |
| Sse9I | AATT | 1 cut(s) | 224 |
| SsiI | CCGC | 1 cut(s) | 153 |
| TaaI | ACNGT | 1 cut(s) | 62 |
| TasI | AATT | 1 cut(s) | 224 |
| TauI | GCSGC | 1 cut(s) | 156 |
| Tru1I | TTAA | 1 cut(s) | 221 |
| Tru9I | TTAA | 1 cut(s) | 221 |
| TseFI | GTSAC | 1 cut(s) | 56 |
| TseI | GCWGC | 2 cut(s) | 134, 185 |
| Tsp45I | GTSAC | 1 cut(s) | 56 |
| TspDTI | ATGAA | 1 cut(s) | 378 |
| Zsp2I | ATGCAT | 1 cut(s) | 328 |