Senescence regulator
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1225700.v1.1 MD05G1225900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0350291 RchiOBHm_Chr3g0465941 RchiOBHm_Chr6g0256401 RchiOBHm_Chr7g0217151 RchiOBHm_Chr7g0219351 |
| rosa_laevigata | RLG00000009798 RLG00000014784 RLG00000017295 RLG00000024613 |
| rosa_roxburghii | Rroxscaffold_5G00337830 Rroxscaffold_6G00414880 Rroxscaffold_7G00190630 |
| rosa_rugosa | Rorug01G0468500 |
| rosa_samantha | Rh3BG145700 Rh3CG146800 Rh3DG235900 Rh6AG082200 Rh7AG228100 Rh7CG242600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 28 |
| AciI | CCGC | 1 cut(s) | 5 |
| AcyI | GRCGYC | 1 cut(s) | 8 |
| AfaI | GTAC | 1 cut(s) | 59 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 76 |
| AgsI | TTSAA | 3 cut(s) | 97, 227, 240 |
| AluBI | AGCT | 1 cut(s) | 105 |
| AluI | AGCT | 1 cut(s) | 105 |
| Alw21I | GWGCWC | 1 cut(s) | 107 |
| Aor13HI | TCCGGA | 1 cut(s) | 28 |
| ApeKI | GCWGC | 1 cut(s) | 13 |
| BanII | GRGCYC | 1 cut(s) | 107 |
| Bbv12I | GWGCWC | 1 cut(s) | 107 |
| BisI | GCNGC | 2 cut(s) | 6, 14 |
| BlsI | GCNGC | 2 cut(s) | 7, 15 |
| BsaHI | GRCGYC | 1 cut(s) | 8 |
| BsaWI | WCCGGW | 1 cut(s) | 28 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 76 |
| Bse118I | RCCGGY | 2 cut(s) | 16, 69 |
| Bse1I | ACTGG | 2 cut(s) | 38, 162 |
| BseAI | TCCGGA | 1 cut(s) | 28 |
| BseGI | GGATG | 1 cut(s) | 158 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BseNI | ACTGG | 2 cut(s) | 38, 162 |
| BsiHKAI | GWGCWC | 1 cut(s) | 107 |
| BsiSI | CCGG | 3 cut(s) | 17, 29, 70 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| BsmI | GAATGC | 1 cut(s) | 24 |
| Bsp1286I | GDGCHC | 1 cut(s) | 107 |
| Bsp13I | TCCGGA | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 42 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspEI | TCCGGA | 1 cut(s) | 28 |
| BspHI | TCATGA | 1 cut(s) | 45 |
| BsrFI | RCCGGY | 2 cut(s) | 16, 69 |
| BsrI | ACTGG | 2 cut(s) | 38, 162 |
| BssAI | RCCGGY | 2 cut(s) | 16, 69 |
| BssMI | GATC | 1 cut(s) | 42 |
| BssNI | GRCGYC | 1 cut(s) | 8 |
| Bst6I | CTCTTC | 1 cut(s) | 241 |
| BstACI | GRCGYC | 1 cut(s) | 8 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 179 |
| BstDEI | CTNAG | 1 cut(s) | 39 |
| BstF5I | GGATG | 1 cut(s) | 158 |
| BstKTI | GATC | 1 cut(s) | 45 |
| BstMBI | GATC | 1 cut(s) | 42 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 179 |
| BtsCI | GGATG | 1 cut(s) | 158 |
| CciI | TCATGA | 1 cut(s) | 45 |
| Cfr10I | RCCGGY | 2 cut(s) | 16, 69 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 1 cut(s) | 105 |
| CviKI_1 | RGCY | 1 cut(s) | 105 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DdeI | CTNAG | 1 cut(s) | 39 |
| DpnI | GATC | 1 cut(s) | 44 |
| DpnII | GATC | 1 cut(s) | 42 |
| Eam1104I | CTCTTC | 1 cut(s) | 241 |
| EarI | CTCTTC | 1 cut(s) | 241 |
| Ecl136II | GAGCTC | 1 cut(s) | 105 |
| Eco24I | GRGCYC | 1 cut(s) | 107 |
| Eco53kI | GAGCTC | 1 cut(s) | 105 |
| EcoICRI | GAGCTC | 1 cut(s) | 105 |
| EcoT38I | GRGCYC | 1 cut(s) | 107 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 1 cut(s) | 47 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| FatI | CATG | 1 cut(s) | 45 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 14 |
| FokI | GGATG | 1 cut(s) | 145 |
| FriOI | GRGCYC | 1 cut(s) | 107 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 14 |
| GluI | GCNGC | 2 cut(s) | 6, 14 |
| HapII | CCGG | 3 cut(s) | 17, 29, 70 |
| Hin1I | GRCGYC | 1 cut(s) | 8 |
| Hin1II | CATG | 1 cut(s) | 49 |
| HpaII | CCGG | 3 cut(s) | 17, 29, 70 |
| Hpy188III | TCNNGA | 2 cut(s) | 29, 46 |
| Hpy99I | CGWCG | 1 cut(s) | 13 |
| HpyAV | CCTTC | 2 cut(s) | 114, 201 |
| HpyCH4V | TGCA | 2 cut(s) | 182, 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 179 |
| HpyF3I | CTNAG | 1 cut(s) | 39 |
| Hsp92I | GRCGYC | 1 cut(s) | 8 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| Kpn2I | TCCGGA | 1 cut(s) | 28 |
| Kzo9I | GATC | 1 cut(s) | 42 |
| LmnI | GCTCC | 1 cut(s) | 102 |
| LpnPI | CCDG | 6 cut(s) | 19, 30, 42, 83, 98, 175 |
| MalI | GATC | 1 cut(s) | 44 |
| MboI | GATC | 1 cut(s) | 42 |
| MboII | GAAGA | 2 cut(s) | 85, 228 |
| MhlI | GDGCHC | 1 cut(s) | 107 |
| MluCI | AATT | 3 cut(s) | 153, 222, 241 |
| MmeI | TCCRAC | 1 cut(s) | 97 |
| MnlI | CCTC | 2 cut(s) | 42, 69 |
| MroI | TCCGGA | 1 cut(s) | 28 |
| MseI | TTAA | 4 cut(s) | 126, 176, 185, 244 |
| MspI | CCGG | 3 cut(s) | 17, 29, 70 |
| Mva1269I | GAATGC | 1 cut(s) | 24 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 179 |
| NdeII | GATC | 1 cut(s) | 42 |
| NlaIII | CATG | 1 cut(s) | 49 |
| PagI | TCATGA | 1 cut(s) | 45 |
| PctI | GAATGC | 1 cut(s) | 24 |
| PkrI | GCNGC | 2 cut(s) | 7, 15 |
| Psp124BI | GAGCTC | 1 cut(s) | 107 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| SacI | GAGCTC | 1 cut(s) | 107 |
| SaqAI | TTAA | 4 cut(s) | 126, 176, 185, 244 |
| SatI | GCNGC | 2 cut(s) | 6, 14 |
| Sau3AI | GATC | 1 cut(s) | 42 |
| SduI | GDGCHC | 1 cut(s) | 107 |
| SetI | ASST | 2 cut(s) | 107, 125 |
| Sse9I | AATT | 3 cut(s) | 153, 222, 241 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SstI | GAGCTC | 1 cut(s) | 107 |
| TasI | AATT | 3 cut(s) | 153, 222, 241 |
| TauI | GCSGC | 1 cut(s) | 8 |
| Tru1I | TTAA | 4 cut(s) | 126, 176, 185, 244 |
| Tru9I | TTAA | 4 cut(s) | 126, 176, 185, 244 |
| TseI | GCWGC | 1 cut(s) | 13 |