RLG00000019722

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
55982657 .. 55985182
2526 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019722

Sequence Viewer

Length: 1596 bp
ATGGAGGCCTCTGACTCTCAATCAGATGCCTTAGCACAAGGCCATGAGCTCAAGGATGGGATGCAGCTTTTTTCAGCATCTGGGATTTTCAGGTTAGGATTCTTTAAGCCTGGGGATGCAAGTAACTCTTACTTAGGTATATGGTACAACAGAAACAATGATAAAGCAGTATGGGTTGCCAACCGAAACAATCCGATTCTTGATAATTCTGGAGTTCTTAGAATTGATCAGTATGGTAACTTGAAGATTACACGGAAGATGGTAGATGATATTGTACTCTATTCAGTTAAAGAAGCAATCAATGCTAGTGCTATTCTTCTTGACAGTGGAAATTTTGTGCTTAGTGAGTTGAACGCTGATGGGTCTATCAAGCAGGAGTTGTGGCAAAGCTTTGATTATCCAACTGACACACTTTTGCCAAAAATGAAGTTGGGATTTAATAGAAAAACTGGCCTCAATTGGACTCTCAAATCATGGAGAACTGGAAATTTGCCTAGCATAGGGTCCTTTACACTTGGTTTGGACCCTAGTGGTGTTAAGCAAATGGTCATTTCTTGGAGAGGAAATCTGTACTGGACTAGTGGATCCTGGCACACTTGGTGCTTCAACCTTACAGATGAGTTTTGCAGTAACTATAAGTACAACTTTAGCTACATATCAAATGAGAATGAAACATACTTGAGTTATTCATTAGATAAAGGTACCACTATTTTCCCAAGACTCCTGTTAAATGAAGAAGGTGAACTCAGAGGTTTCGGAATGGATGCCATGTTTACTGGAGTTTCATGCACTTCTTCCACCAACTCTACCTTGAAAAATGGGTGTGTTGAGCAAAGGCAACCAGACTGCAGGAGCTCACATGACAAATTCGTGCGAAAACGTGGTGTCATGTCTCGCAGTGGAATCAAGATCCTTGAGAATGAAAACATGACTCTGATTGATTGTTGGGATGTTTGCTTCAAAATGTGTTCTTGCCTTGCTTATGCTTCTGCAAATGATGATGGCACCGGCTGCGAGATTTGGAAGGAAGGAGCAAGTTTCACACAATACAAATTGGGTAGTCTGAGACAGATACACATCCTGGAATCCAAAGTCAATGCAGTAGCGAAGTGGTGGATATGGGTACTCATTTTGGTGGCCGGAACTGGAAAGCTACTTGATGGGAAAGAAGTAGCAATAAAGAGACTTTCAAGAAGCTCAGGACAAGGGCTGGTGGAGTTCAAAAATGAAGCTATGCTTGTTGCCAAACTCCAACACACTAATTTGGTGAGGCTTTTAGGATTCTGCATTCAAGGAGACGAAAAAATATTGATCTATGAGTACATGGCCAACAAAAGCTTAGATTTCTTCCTCTTCGATGCTCAAAGAAAGAATGTCTTAGACTGGAAGAAACGCTTCAGCATCATAGAGGGGATTGCTCAAGGACTAATCTATCTTCATAAATACTCGAGACTAAAAGTGATTCACAGGGATTTAAAAGCAAGCAATATTTTACTCGACAAGAATCTAAATCCTAAAGTATCAGATTTTGGCATGGCTCGGATATGTGGGTTGAATGAGTCAGAAGAAAACACAAATAGAGTTGTTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

532

Amino Acids

59.99

Weight (kDa)

8.55

Isoelectric Point (pI)

28.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 57 - 160 5.5e-30 D-mannose binding lectin
PAN_2 PF08276 283 - 343 1.9e-08 PAN-like domain
Pkinase PF00069 387 - 531 1.3e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 388 - 519 4e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 701
AccB1I GGYRCC 2 cut(s) 701, 1004
AclWI GGATC 3 cut(s) 579, 592, 904
AcoI YGGCCR 2 cut(s) 1137, 1326
AcsI RAATTY 3 cut(s) 331, 487, 866
AcuI CTGAAG 1 cut(s) 1381
AdeI CACNNNGTG 1 cut(s) 600
AfaI GTAC 7 cut(s) 146, 276, 572, 641, 703, 1125, 1322
AfiI CCNNNNNNNGG 1 cut(s) 500
AgsI TTSAA 9 cut(s) 244, 352, 607, 814, 961, 1191, 1222, 1292, 1555
AhlI ACTAGT 1 cut(s) 578
AjnI CCWGG 3 cut(s) 109, 587, 1080
AluBI AGCT 9 cut(s) 49, 67, 390, 651, 855, 1153, 1197, 1232, 1338
AluI AGCT 9 cut(s) 49, 67, 390, 651, 855, 1153, 1197, 1232, 1338
Alw21I GWGCWC 2 cut(s) 51, 857
Alw26I GTCTC 5 cut(s) 897, 1060, 1177, 1290, 1444
AlwI GGATC 3 cut(s) 579, 592, 904
AlwNI CAGNNNCTG 1 cut(s) 80
Ama87I CYCGRG 1 cut(s) 1447
AoxI GGCC 5 cut(s) 6, 40, 451, 1137, 1326
ApeKI GCWGC 2 cut(s) 64, 1011
ApoI RAATTY 3 cut(s) 331, 487, 866
Asp700I GAANNNNTTC 1 cut(s) 1394
Asp718I GGTACC 1 cut(s) 701
AspS9I GGNCC 2 cut(s) 504, 523
AsuHPI GGTGA 2 cut(s) 752, 1279
AvaI CYCGRG 1 cut(s) 1447
AvaII GGWCC 2 cut(s) 504, 523
BalI TGGCCA 1 cut(s) 1328
BamHI GGATCC 1 cut(s) 584
BanI GGYRCC 2 cut(s) 701, 1004
BanII GRGCYC 2 cut(s) 51, 857
Bbv12I GWGCWC 2 cut(s) 51, 857
BbvI GCAGC 2 cut(s) 76, 998
BccI CCATC 5 cut(s) 50, 253, 353, 995, 1154
BciT130I CCWGG 3 cut(s) 111, 589, 1082
BclI TGATCA 1 cut(s) 226
BcoDI GTCTC 5 cut(s) 897, 1060, 1177, 1290, 1444
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 4 cut(s) 306, 495, 528, 579
BfmI CTRYAG 1 cut(s) 847
BisI GCNGC 2 cut(s) 65, 1012
BlsI GCNGC 2 cut(s) 66, 1013
Bme1390I CCNGG 3 cut(s) 111, 589, 1082
Bme18I GGWCC 2 cut(s) 504, 523
BmeT110I CYCGRG 1 cut(s) 1447
BmgT120I GGNCC 2 cut(s) 504, 523
BmiI GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
BmrFI CCNGG 3 cut(s) 111, 589, 1082
BmsI GCATC 7 cut(s) 16, 51, 86, 106, 754, 1348, 1410
BpmI CTGGAG 2 cut(s) 231, 798
Bpu10I CCTNAGC 2 cut(s) 31, 1198
BpuEI CTTGAG 4 cut(s) 35, 700, 935, 1404
BsaBI GATNNNNATC 1 cut(s) 1076
BsaJI CCNNGG 1 cut(s) 110
Bsc4I CCNNNNNNNGG 1 cut(s) 500
Bse118I RCCGGY 1 cut(s) 1007
Bse1I ACTGG 6 cut(s) 454, 487, 578, 781, 1150, 1388
Bse8I GATNNNNATC 1 cut(s) 1076
BseBI CCWGG 3 cut(s) 111, 589, 1082
BseDI CCNNGG 1 cut(s) 110
BseGI GGATG 6 cut(s) 61, 66, 121, 769, 955, 1077
BseJI GATNNNNATC 1 cut(s) 1076
BseLI CCNNNNNNNGG 1 cut(s) 500
BseMII CTCAG 3 cut(s) 760, 1055, 1212
BseNI ACTGG 6 cut(s) 454, 487, 578, 781, 1150, 1388
BseXI GCAGC 2 cut(s) 76, 998
BshFI GGCC 5 cut(s) 8, 42, 453, 1139, 1328
BshNI GGYRCC 2 cut(s) 701, 1004
BsiHKAI GWGCWC 2 cut(s) 51, 857
BsiHKCI CYCGRG 1 cut(s) 1447
BsiSI CCGG 2 cut(s) 1008, 1140
BslI CCNNNNNNNGG 1 cut(s) 500
BsmAI GTCTC 5 cut(s) 897, 1060, 1177, 1290, 1444
BsmBI CGTCTC 1 cut(s) 1290
BsmI GAATGC 1 cut(s) 1287
BsnI GGCC 5 cut(s) 8, 42, 453, 1139, 1328
BsoBI CYCGRG 1 cut(s) 1447
Bsp1286I GDGCHC 2 cut(s) 51, 857
Bsp143I GATC 4 cut(s) 226, 584, 909, 1311
BspANI GGCC 5 cut(s) 8, 42, 453, 1139, 1328
BspCNI CTCAG 3 cut(s) 759, 1056, 1211
BspLI GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
BspMAI CTGCAG 1 cut(s) 851
BspPI GGATC 3 cut(s) 579, 592, 904
BspT107I GGYRCC 2 cut(s) 701, 1004
BsrFI RCCGGY 1 cut(s) 1007
BsrI ACTGG 6 cut(s) 454, 487, 578, 781, 1150, 1388
BssAI RCCGGY 1 cut(s) 1007
BssECI CCNNGG 1 cut(s) 110
BssMI GATC 4 cut(s) 226, 584, 909, 1311
Bst2UI CCWGG 3 cut(s) 111, 589, 1082
Bst4CI ACNGT 1 cut(s) 326
Bst6I CTCTTC 1 cut(s) 1358
BstAPI GCANNNNNTGC 2 cut(s) 302, 1011
BstC8I GCNNGC 1 cut(s) 1483
BstDEI CTNAG 9 cut(s) 31, 133, 218, 341, 746, 1064, 1198, 1339, 1378
BstENI CCTNNNNNAGG 1 cut(s) 498
BstF5I GGATG 6 cut(s) 61, 66, 121, 769, 955, 1077
BstKTI GATC 4 cut(s) 229, 587, 912, 1314
BstMAI GTCTC 5 cut(s) 897, 1060, 1177, 1290, 1444
BstMBI GATC 4 cut(s) 226, 584, 909, 1311
BstMWI GCNNNNNNNGC 2 cut(s) 302, 1011
BstNI CCWGG 3 cut(s) 111, 589, 1082
BstSCI CCNGG 3 cut(s) 109, 587, 1080
BstSFI CTRYAG 1 cut(s) 847
BstV1I GCAGC 2 cut(s) 76, 998
BstX2I RGATCY 2 cut(s) 584, 909
BstYI RGATCY 2 cut(s) 584, 909
BsuRI GGCC 5 cut(s) 8, 42, 453, 1139, 1328
BtsCI GGATG 6 cut(s) 61, 66, 121, 769, 955, 1077
BtsI GCAGTG 1 cut(s) 904
BtsIMutI CAGTG 2 cut(s) 331, 904
Cac8I GCNNGC 1 cut(s) 1483
CaiI CAGNNNCTG 1 cut(s) 80
Cfr10I RCCGGY 1 cut(s) 1007
Cfr13I GGNCC 2 cut(s) 504, 523
Csp6I GTAC 7 cut(s) 145, 275, 571, 640, 702, 1124, 1321
CviAII CATG 9 cut(s) 44, 474, 769, 786, 860, 889, 928, 1324, 1534
CviQI GTAC 7 cut(s) 145, 275, 571, 640, 702, 1124, 1321
DdeI CTNAG 9 cut(s) 31, 133, 218, 341, 746, 1064, 1198, 1339, 1378
DpnI GATC 4 cut(s) 228, 586, 911, 1313
DpnII GATC 4 cut(s) 226, 584, 909, 1311
DraI TTTAAA 1 cut(s) 1476
DraIII CACNNNGTG 1 cut(s) 600
EaeI YGGCCR 2 cut(s) 1137, 1326
Eam1104I CTCTTC 1 cut(s) 1358
EarI CTCTTC 1 cut(s) 1358
Ecl136II GAGCTC 2 cut(s) 49, 855
Eco147I AGGCCT 1 cut(s) 8
Eco24I GRGCYC 2 cut(s) 51, 857
Eco47I GGWCC 2 cut(s) 504, 523
Eco53kI GAGCTC 2 cut(s) 49, 855
Eco57I CTGAAG 1 cut(s) 1381
Eco88I CYCGRG 1 cut(s) 1447
EcoICRI GAGCTC 2 cut(s) 49, 855
EcoNI CCTNNNNNAGG 1 cut(s) 498
EcoO109I RGGNCCY 1 cut(s) 504
EcoRII CCWGG 3 cut(s) 109, 587, 1080
EcoT38I GRGCYC 2 cut(s) 51, 857
Esp3I CGTCTC 1 cut(s) 1290
FaeI CATG 9 cut(s) 47, 477, 772, 789, 863, 892, 931, 1327, 1537
FatI CATG 9 cut(s) 43, 473, 768, 785, 859, 888, 927, 1323, 1533
FbaI TGATCA 1 cut(s) 226
Fnu4HI GCNGC 2 cut(s) 65, 1012
FokI GGATG 6 cut(s) 68, 73, 128, 776, 962, 1064
FriOI GRGCYC 2 cut(s) 51, 857
Fsp4HI GCNGC 2 cut(s) 65, 1012
FspBI CTAG 4 cut(s) 306, 495, 528, 579
GluI GCNGC 2 cut(s) 65, 1012
GsuI CTGGAG 2 cut(s) 231, 798
HaeIII GGCC 5 cut(s) 8, 42, 453, 1139, 1328
HapII CCGG 2 cut(s) 1008, 1140
Hin1II CATG 9 cut(s) 47, 477, 772, 789, 863, 892, 931, 1327, 1537
HindIII AAGCTT 2 cut(s) 388, 1336
HpaII CCGG 2 cut(s) 1008, 1140
HphI GGTGA 2 cut(s) 752, 1279
Hpy166II GTNNAC 2 cut(s) 743, 774
Hpy188III TCNNGA 7 cut(s) 200, 210, 320, 907, 1191, 1200, 1449
Hpy8I GTNNAC 2 cut(s) 743, 774
HpyAV CCTTC 3 cut(s) 731, 1018, 1022
HpyCH4III ACNGT 1 cut(s) 326
HpyCH4IV ACGT 1 cut(s) 880
HpyCH4V TGCA 8 cut(s) 64, 119, 627, 789, 849, 992, 1100, 1287
HpyF10VI GCNNNNNNNGC 2 cut(s) 302, 1011
HpyF3I CTNAG 9 cut(s) 31, 133, 218, 341, 746, 1064, 1198, 1339, 1378
HpySE526I ACGT 1 cut(s) 880
Hsp92II CATG 9 cut(s) 47, 477, 772, 789, 863, 892, 931, 1327, 1537
KpnI GGTACC 1 cut(s) 705
Ksp22I TGATCA 1 cut(s) 226
Kzo9I GATC 4 cut(s) 226, 584, 909, 1311
LmnI GCTCC 2 cut(s) 852, 1031
Lsp1109I GCAGC 2 cut(s) 76, 998
LweI GCATC 7 cut(s) 16, 51, 86, 106, 754, 1348, 1410
MaeI CTAG 4 cut(s) 306, 495, 528, 579
MaeII ACGT 1 cut(s) 880
MaeIII GTNAC 3 cut(s) 122, 236, 629
MalI GATC 4 cut(s) 228, 586, 911, 1313
MboI GATC 4 cut(s) 226, 584, 909, 1311
MfeI CAATTG 1 cut(s) 457
MflI RGATCY 2 cut(s) 584, 909
MhlI GDGCHC 2 cut(s) 51, 857
MlsI TGGCCA 1 cut(s) 1328
MluCI AATT 8 cut(s) 205, 222, 331, 457, 487, 866, 1052, 1261
MluNI TGGCCA 1 cut(s) 1328
MlyI GAGTC 5 cut(s) 8, 457, 714, 925, 1568
MmeI TCCRAC 3 cut(s) 425, 1276, 1567
MnlI CCTC 7 cut(s) 19, 464, 554, 743, 1263, 1361, 1402
Mox20I TGGCCA 1 cut(s) 1328
MroXI GAANNNNTTC 1 cut(s) 1394
MscI TGGCCA 1 cut(s) 1328
MseI TTAA 6 cut(s) 105, 288, 438, 537, 728, 1475
MslI CAYNNNNRTG 1 cut(s) 1133
Msp20I TGGCCA 1 cut(s) 1328
MspI CCGG 2 cut(s) 1008, 1140
MspR9I CCNGG 3 cut(s) 111, 589, 1082
MunI CAATTG 1 cut(s) 457
Mva1269I GAATGC 1 cut(s) 1287
MvaI CCWGG 3 cut(s) 111, 589, 1082
MwoI GCNNNNNNNGC 2 cut(s) 302, 1011
NdeII GATC 4 cut(s) 226, 584, 909, 1311
NlaIII CATG 9 cut(s) 47, 477, 772, 789, 863, 892, 931, 1327, 1537
NlaIV GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
PaeR7I CTCGAG 1 cut(s) 1447
PceI AGGCCT 1 cut(s) 8
PctI GAATGC 1 cut(s) 1287
PdmI GAANNNNTTC 1 cut(s) 1394
PfeI GAWTC 7 cut(s) 99, 196, 903, 1085, 1281, 1462, 1504
PfoI TCCNGGA 1 cut(s) 1080
PkrI GCNGC 2 cut(s) 66, 1013
PleI GAGTC 5 cut(s) 8, 457, 714, 925, 1567
PpsI GAGTC 5 cut(s) 8, 457, 714, 925, 1567
PpuMI RGGWCCY 1 cut(s) 504
Psp124BI GAGCTC 2 cut(s) 51, 857
Psp5II RGGWCCY 1 cut(s) 504
Psp6I CCWGG 3 cut(s) 109, 587, 1080
PspGI CCWGG 3 cut(s) 109, 587, 1080
PspN4I GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
PspPI GGNCC 2 cut(s) 504, 523
PspPPI RGGWCCY 1 cut(s) 504
PstI CTGCAG 1 cut(s) 851
PstNI CAGNNNCTG 1 cut(s) 80
PsuI RGATCY 2 cut(s) 584, 909
RsaI GTAC 7 cut(s) 146, 276, 572, 641, 703, 1125, 1322
RsaNI GTAC 7 cut(s) 145, 275, 571, 640, 702, 1124, 1321
RseI CAYNNNNRTG 1 cut(s) 1133
SacI GAGCTC 2 cut(s) 51, 857
SaqAI TTAA 6 cut(s) 105, 288, 438, 537, 728, 1475
SatI GCNGC 2 cut(s) 65, 1012
Sau3AI GATC 4 cut(s) 226, 584, 909, 1311
Sau96I GGNCC 2 cut(s) 504, 523
SchI GAGTC 5 cut(s) 8, 457, 714, 925, 1568
ScrFI CCNGG 3 cut(s) 111, 589, 1082
SduI GDGCHC 2 cut(s) 51, 857
SfaNI GCATC 7 cut(s) 16, 51, 86, 106, 754, 1348, 1410
SfcI CTRYAG 1 cut(s) 847
Sfr274I CTCGAG 1 cut(s) 1447
SinI GGWCC 2 cut(s) 504, 523
SlaI CTCGAG 1 cut(s) 1447
SmiMI CAYNNNNRTG 1 cut(s) 1133
SmlI CTYRAG 5 cut(s) 50, 679, 914, 1419, 1447
SmoI CTYRAG 5 cut(s) 50, 679, 914, 1419, 1447
SpeI ACTAGT 1 cut(s) 578
Sse9I AATT 8 cut(s) 205, 222, 331, 457, 487, 866, 1052, 1261
SseBI AGGCCT 1 cut(s) 8
SspI AATATT 2 cut(s) 1308, 1489
SspMI CTAG 4 cut(s) 306, 495, 528, 579
SstI GAGCTC 2 cut(s) 51, 857
StuI AGGCCT 1 cut(s) 8
StyD4I CCNGG 3 cut(s) 109, 587, 1080
TaaI ACNGT 1 cut(s) 326
TaiI ACGT 1 cut(s) 883
TaqI TCGA 3 cut(s) 1356, 1448, 1497
TasI AATT 8 cut(s) 205, 222, 331, 457, 487, 866, 1052, 1261
TatI WGTACW 4 cut(s) 274, 570, 639, 1320
TfiI GAWTC 7 cut(s) 99, 196, 903, 1085, 1281, 1462, 1504
Tru1I TTAA 6 cut(s) 105, 288, 438, 537, 728, 1475
Tru9I TTAA 6 cut(s) 105, 288, 438, 537, 728, 1475
TscAI CASTG 2 cut(s) 331, 904
TseI GCWGC 2 cut(s) 64, 1011
TspDTI ATGAA 8 cut(s) 440, 678, 684, 747, 774, 936, 1242, 1427
TspGWI ACGGA 1 cut(s) 268
TspRI CASTG 2 cut(s) 331, 904
VpaK11BI GGWCC 2 cut(s) 504, 523
XagI CCTNNNNNAGG 1 cut(s) 498
XapI RAATTY 3 cut(s) 331, 487, 866
XhoI CTCGAG 1 cut(s) 1447
XmnI GAANNNNTTC 1 cut(s) 1394
XspI CTAG 4 cut(s) 306, 495, 528, 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.