Rmu_sc0008250.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008250.1
Physical Location & Seq
Reverse (-)
705 .. 3976
3272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008250.1_g000001.1.cds

Sequence Viewer

Length: 1872 bp
atggaggactctgactctcaatcagataccttagcacaaggccaagagctcaaggatgggatgcagcttttttcagcatctgggattttcaggttaggattctttaagcctgggaatgctagtaactcttacttgggtatatggtacaacagaaataatgaaaaagcagtatgggttgccaaccgaaacaatccgattcttgacaattctggagttcttagaattgatcagtatggtaacttgaagattacacagaagatggtagatgatattgtactatattcagttaaagaagcaatcaatgctagtgctattcttcttgacagtggaaattttgtgcttagtgagttgaacgctgatgggtctataaagcaggagctgtggcaaagctttgattatccaaccgacacacttttgccaaaaatgaagttgggatttaatagaaaaactggcctgaattggactctcaaatcatggagaactggaaatttgcctagcatagggtcctttacacttggtttggaccctagtggtgttaaacaaatggtcatttcttggagaggaaatctgtactggactagtggatcctggcacacttggtgcttcagccttacagatgagttttgcagtaactataagtacaactttagctacatatcaaatgagaatgaaacatacttaagttattcagtagataaaggtgccactattttccctagactcctgttaaatgaagaaggtgaactcagaggtttcaggatggatgccatgtttacaggagtttcatgcacttcttccaccaactctaccttgaaaaatgggtgtgttgagcaaaggcaaccagactgcaggagctctcatgacaaattcgtgcgaaaacttggtgtcatgtctcgcagtggaatcaagatccttgagaatgaaaacatgactctgattgattgttgggatgtttgcttcaaaatgtgttcttgtcttgcttatgcttctgcaaatgatgatggcaccggctgcgagatttggaagaaaggggcaagtttcacacaaaacaatttgggtagtctgagagagatacacatcctggaatccaaaggattctgcattcaaggagacgaaaaaatattgatctatgagtacatgccgaacaaaagcttagatttcttcctcttcgatgctcaaagaaagaatgtcttagactggaagaaacgcttcagcatcatagaggggattgctcaaggactaatctatcttcataaatactcgagactaaaagtgattcacagggatttaaaagccagcaatattttactcgacaagaatctaaatcctaaagtatcagattttggcatggctaggatatgtgggttgaatgagtcagaagaaaacacaaatagagttgttggaacatatggttatatgtctccggagtatgccatgaaaggaattgtgtccattaaaactgatattttcagctttggagtcctactgctggaaattgtaagtgggaagaagaataacagtaactaccactcagagtaccaactcaacctcattggatatgcatggcagctttggaatgaagatagaggatctgagctagcagacccaggattaggtgaatcatgccccattactgaagttctaagatgcattcatgtgggtcttttgtgtgtacaagaccatgcagcagacaggccaacaatgccggatgttgttttcatgcttttaaatcaaagtattctattacctcctccaaaacaaccagcattttttataaatgcagttgagaaagagtttataacggcatcaggaaaggagtctgaaatttattccacaaatgatgtaactatatcagtgatggaagcaagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

623

Amino Acids

70.3

Weight (kDa)

5.69

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1775, 1799
AccB1I GGYRCC 2 cut(s) 701, 1004
AccIII TCCGGA 1 cut(s) 1423
AclWI GGATC 4 cut(s) 579, 592, 904, 1597
AcsI RAATTY 4 cut(s) 331, 487, 866, 1824
AcuI CTGAAG 3 cut(s) 589, 1195, 1656
AdeI CACNNNGTG 1 cut(s) 600
AfaI GTAC 7 cut(s) 146, 276, 572, 641, 1136, 1538, 1674
AfiI CCNNNNNNNGG 3 cut(s) 500, 1489, 1613
AflII CTTAAG 1 cut(s) 679
AgsI TTSAA 6 cut(s) 244, 352, 814, 961, 1106, 1369
AhlI ACTAGT 1 cut(s) 578
AjnI CCWGG 4 cut(s) 109, 587, 1080, 1606
Alw21I GWGCWC 2 cut(s) 51, 857
Alw26I GTCTC 4 cut(s) 897, 1104, 1258, 1425
AlwI GGATC 4 cut(s) 579, 592, 904, 1597
AlwNI CAGNNNCTG 2 cut(s) 80, 379
Ama87I CYCGRG 1 cut(s) 1261
Aor13HI TCCGGA 1 cut(s) 1423
AoxI GGCC 3 cut(s) 40, 451, 1694
ApeKI GCWGC 4 cut(s) 64, 1011, 1567, 1685
ApoI RAATTY 4 cut(s) 331, 487, 866, 1824
Asp700I GAANNNNTTC 1 cut(s) 1208
AspS9I GGNCC 2 cut(s) 504, 523
AsuHPI GGTGA 2 cut(s) 752, 1628
AsuNHI GCTAGC 1 cut(s) 1597
AvaI CYCGRG 1 cut(s) 1261
AvaII GGWCC 2 cut(s) 504, 523
BamHI GGATCC 1 cut(s) 584
BanI GGYRCC 2 cut(s) 701, 1004
BanII GRGCYC 2 cut(s) 51, 857
Bbv12I GWGCWC 2 cut(s) 51, 857
BbvI GCAGC 4 cut(s) 76, 998, 1579, 1697
BccI CCATC 6 cut(s) 50, 253, 353, 754, 995, 1852
BceAI ACGGC 1 cut(s) 1818
BciT130I CCWGG 4 cut(s) 111, 589, 1082, 1608
BclI TGATCA 1 cut(s) 226
BcoDI GTCTC 4 cut(s) 897, 1104, 1258, 1425
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 8 cut(s) 120, 306, 495, 528, 579, 717, 1353, 1598
BfmI CTRYAG 1 cut(s) 847
BfrI CTTAAG 1 cut(s) 679
BisI GCNGC 4 cut(s) 65, 1012, 1568, 1686
BlsI GCNGC 4 cut(s) 66, 1013, 1569, 1687
Bme1390I CCNGG 4 cut(s) 111, 589, 1082, 1608
Bme18I GGWCC 2 cut(s) 504, 523
BmeT110I CYCGRG 1 cut(s) 1261
BmgT120I GGNCC 2 cut(s) 504, 523
BmiI GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
BmrFI CCNGG 4 cut(s) 111, 589, 1082, 1608
BmsI GCATC 7 cut(s) 51, 86, 754, 1162, 1224, 1637, 1814
BmtI GCTAGC 1 cut(s) 1601
BpmI CTGGAG 1 cut(s) 231
Bpu10I CCTNAGC 1 cut(s) 31
BpuEI CTTGAG 3 cut(s) 35, 935, 1218
BsaBI GATNNNNATC 1 cut(s) 1076
BsaJI CCNNGG 2 cut(s) 110, 1606
BsaWI WCCGGW 1 cut(s) 1423
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 1489, 1613
Bse118I RCCGGY 1 cut(s) 1007
Bse1I ACTGG 4 cut(s) 454, 487, 578, 1202
Bse8I GATNNNNATC 1 cut(s) 1076
BseAI TCCGGA 1 cut(s) 1423
BseBI CCWGG 4 cut(s) 111, 589, 1082, 1608
BseDI CCNNGG 2 cut(s) 110, 1606
BseGI GGATG 7 cut(s) 61, 66, 765, 769, 955, 1077, 1714
BseJI GATNNNNATC 1 cut(s) 1076
BseLI CCNNNNNNNGG 3 cut(s) 500, 1489, 1613
BseMII CTCAG 4 cut(s) 760, 1055, 1545, 1584
BseNI ACTGG 4 cut(s) 454, 487, 578, 1202
BseRI GAGGAG 1 cut(s) 1740
BseXI GCAGC 4 cut(s) 76, 998, 1579, 1697
BshFI GGCC 3 cut(s) 42, 453, 1696
BshNI GGYRCC 2 cut(s) 701, 1004
BsiHKAI GWGCWC 2 cut(s) 51, 857
BsiHKCI CYCGRG 1 cut(s) 1261
BsiSI CCGG 3 cut(s) 1008, 1424, 1706
BslI CCNNNNNNNGG 3 cut(s) 500, 1489, 1613
BsmAI GTCTC 4 cut(s) 897, 1104, 1258, 1425
BsmBI CGTCTC 1 cut(s) 1104
BsmI GAATGC 3 cut(s) 121, 1101, 1650
BsnI GGCC 3 cut(s) 42, 453, 1696
BsoBI CYCGRG 1 cut(s) 1261
Bsp1286I GDGCHC 2 cut(s) 51, 857
Bsp13I TCCGGA 1 cut(s) 1423
Bsp1407I TGTACA 1 cut(s) 1672
Bsp143I GATC 5 cut(s) 226, 584, 909, 1125, 1589
BspANI GGCC 3 cut(s) 42, 453, 1696
BspCNI CTCAG 4 cut(s) 759, 1056, 1544, 1585
BspEI TCCGGA 1 cut(s) 1423
BspHI TCATGA 1 cut(s) 859
BspLI GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
BspMAI CTGCAG 1 cut(s) 851
BspOI GCTAGC 1 cut(s) 1601
BspPI GGATC 4 cut(s) 579, 592, 904, 1597
BspT107I GGYRCC 2 cut(s) 701, 1004
BspTI CTTAAG 1 cut(s) 679
BsrFI RCCGGY 1 cut(s) 1007
BsrGI TGTACA 1 cut(s) 1672
BsrI ACTGG 4 cut(s) 454, 487, 578, 1202
BssAI RCCGGY 1 cut(s) 1007
BssECI CCNNGG 2 cut(s) 110, 1606
BssMI GATC 5 cut(s) 226, 584, 909, 1125, 1589
Bst2UI CCWGG 4 cut(s) 111, 589, 1082, 1608
Bst4CI ACNGT 2 cut(s) 326, 1520
Bst6I CTCTTC 1 cut(s) 1172
BstAFI CTTAAG 1 cut(s) 679
BstAPI GCANNNNNTGC 2 cut(s) 302, 1011
BstAUI TGTACA 1 cut(s) 1672
BstC8I GCNNGC 2 cut(s) 1297, 1599
BstENI CCTNNNNNAGG 1 cut(s) 498
BstF5I GGATG 7 cut(s) 61, 66, 765, 769, 955, 1077, 1714
BstKTI GATC 5 cut(s) 229, 587, 912, 1128, 1592
BstMAI GTCTC 4 cut(s) 897, 1104, 1258, 1425
BstMBI GATC 5 cut(s) 226, 584, 909, 1125, 1589
BstMWI GCNNNNNNNGC 3 cut(s) 302, 1011, 1702
BstNI CCWGG 4 cut(s) 111, 589, 1082, 1608
BstNSI RCATGY 1 cut(s) 1141
BstSCI CCNGG 4 cut(s) 109, 587, 1080, 1606
BstSFI CTRYAG 1 cut(s) 847
BstV1I GCAGC 4 cut(s) 76, 998, 1579, 1697
BstX2I RGATCY 3 cut(s) 584, 909, 1589
BstYI RGATCY 3 cut(s) 584, 909, 1589
BsuRI GGCC 3 cut(s) 42, 453, 1696
BtsCI GGATG 7 cut(s) 61, 66, 765, 769, 955, 1077, 1714
BtsI GCAGTG 1 cut(s) 904
BtsIMutI CAGTG 3 cut(s) 331, 904, 1860
Cac8I GCNNGC 2 cut(s) 1297, 1599
CaiI CAGNNNCTG 2 cut(s) 80, 379
CciI TCATGA 1 cut(s) 859
Cfr10I RCCGGY 1 cut(s) 1007
Cfr13I GGNCC 2 cut(s) 504, 523
Csp6I GTAC 7 cut(s) 145, 275, 571, 640, 1135, 1537, 1673
CviQI GTAC 7 cut(s) 145, 275, 571, 640, 1135, 1537, 1673
DpnI GATC 5 cut(s) 228, 586, 911, 1127, 1591
DpnII GATC 5 cut(s) 226, 584, 909, 1125, 1589
DraI TTTAAA 2 cut(s) 1290, 1728
DraIII CACNNNGTG 1 cut(s) 600
Eam1104I CTCTTC 1 cut(s) 1172
EarI CTCTTC 1 cut(s) 1172
Ecl136II GAGCTC 2 cut(s) 49, 855
Eco24I GRGCYC 2 cut(s) 51, 857
Eco47I GGWCC 2 cut(s) 504, 523
Eco53kI GAGCTC 2 cut(s) 49, 855
Eco57I CTGAAG 3 cut(s) 589, 1195, 1656
Eco88I CYCGRG 1 cut(s) 1261
EcoICRI GAGCTC 2 cut(s) 49, 855
EcoNI CCTNNNNNAGG 1 cut(s) 498
EcoO109I RGGNCCY 1 cut(s) 504
EcoRII CCWGG 4 cut(s) 109, 587, 1080, 1606
EcoT22I ATGCAT 2 cut(s) 1564, 1652
EcoT38I GRGCYC 2 cut(s) 51, 857
Esp3I CGTCTC 1 cut(s) 1104
FalI AAGNNNNNCTT 6 cut(s) 629, 661, 1175, 1207, 1193, 1225
FauNDI CATATG 1 cut(s) 1408
FbaI TGATCA 1 cut(s) 226
Fnu4HI GCNGC 4 cut(s) 65, 1012, 1568, 1686
FokI GGATG 7 cut(s) 68, 73, 772, 776, 962, 1064, 1721
FriOI GRGCYC 2 cut(s) 51, 857
Fsp4HI GCNGC 4 cut(s) 65, 1012, 1568, 1686
FspBI CTAG 8 cut(s) 120, 306, 495, 528, 579, 717, 1353, 1598
GluI GCNGC 4 cut(s) 65, 1012, 1568, 1686
GsuI CTGGAG 1 cut(s) 231
HaeIII GGCC 3 cut(s) 42, 453, 1696
HapII CCGG 3 cut(s) 1008, 1424, 1706
HindIII AAGCTT 2 cut(s) 388, 1150
HpaII CCGG 3 cut(s) 1008, 1424, 1706
HphI GGTGA 2 cut(s) 752, 1628
Hpy166II GTNNAC 3 cut(s) 743, 774, 1673
Hpy188III TCNNGA 9 cut(s) 200, 210, 320, 757, 860, 907, 1263, 1424, 1809
Hpy8I GTNNAC 3 cut(s) 743, 774, 1673
HpyAV CCTTC 1 cut(s) 731
HpyCH4III ACNGT 2 cut(s) 326, 1520
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 1011, 1702
Kpn2I TCCGGA 1 cut(s) 1423
Ksp22I TGATCA 1 cut(s) 226
Kzo9I GATC 5 cut(s) 226, 584, 909, 1125, 1589
LmnI GCTCC 2 cut(s) 376, 852
Lsp1109I GCAGC 4 cut(s) 76, 998, 1579, 1697
LweI GCATC 7 cut(s) 51, 86, 754, 1162, 1224, 1637, 1814
MaeI CTAG 8 cut(s) 120, 306, 495, 528, 579, 717, 1353, 1598
MaeIII GTNAC 5 cut(s) 122, 236, 629, 1520, 1843
MalI GATC 5 cut(s) 228, 586, 911, 1127, 1591
MboI GATC 5 cut(s) 226, 584, 909, 1125, 1589
MflI RGATCY 3 cut(s) 584, 909, 1589
MhlI GDGCHC 2 cut(s) 51, 857
MlyI GAGTC 8 cut(s) 2, 8, 457, 714, 925, 1382, 1488, 1826
MmeI TCCRAC 2 cut(s) 425, 1381
MnlI CCTC 8 cut(s) 554, 743, 1175, 1216, 1559, 1580, 1758, 1761
Mph1103I ATGCAT 2 cut(s) 1564, 1652
MroI TCCGGA 1 cut(s) 1423
MroXI GAANNNNTTC 1 cut(s) 1208
MseI TTAA 9 cut(s) 105, 288, 438, 537, 680, 728, 1289, 1455, 1727
MslI CAYNNNNRTG 1 cut(s) 1655
MspCI CTTAAG 1 cut(s) 679
MspI CCGG 3 cut(s) 1008, 1424, 1706
MspR9I CCNGG 4 cut(s) 111, 589, 1082, 1608
Mva1269I GAATGC 3 cut(s) 121, 1101, 1650
MvaI CCWGG 4 cut(s) 111, 589, 1082, 1608
MwoI GCNNNNNNNGC 3 cut(s) 302, 1011, 1702
NdeI CATATG 1 cut(s) 1408
NdeII GATC 5 cut(s) 226, 584, 909, 1125, 1589
NheI GCTAGC 1 cut(s) 1597
NlaIV GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
NsiI ATGCAT 2 cut(s) 1564, 1652
NspI RCATGY 1 cut(s) 1141
PaeR7I CTCGAG 1 cut(s) 1261
PagI TCATGA 1 cut(s) 859
PctI GAATGC 3 cut(s) 121, 1101, 1650
PdmI GAANNNNTTC 1 cut(s) 1208
PfeI GAWTC 8 cut(s) 99, 196, 903, 1085, 1095, 1276, 1318, 1619
PfoI TCCNGGA 1 cut(s) 1080
PkrI GCNGC 4 cut(s) 66, 1013, 1569, 1687
PleI GAGTC 8 cut(s) 2, 8, 457, 714, 925, 1381, 1487, 1825
PpsI GAGTC 8 cut(s) 2, 8, 457, 714, 925, 1381, 1487, 1825
PpuMI RGGWCCY 1 cut(s) 504
PsiI TTATAA 2 cut(s) 1775, 1799
Psp124BI GAGCTC 2 cut(s) 51, 857
Psp5II RGGWCCY 1 cut(s) 504
Psp6I CCWGG 4 cut(s) 109, 587, 1080, 1606
PspGI CCWGG 4 cut(s) 109, 587, 1080, 1606
PspN4I GGNNCC 5 cut(s) 505, 525, 586, 703, 1006
PspPI GGNCC 2 cut(s) 504, 523
PspPPI RGGWCCY 1 cut(s) 504
PstI CTGCAG 1 cut(s) 851
PstNI CAGNNNCTG 2 cut(s) 80, 379
PsuI RGATCY 3 cut(s) 584, 909, 1589
RsaI GTAC 7 cut(s) 146, 276, 572, 641, 1136, 1538, 1674
RsaNI GTAC 7 cut(s) 145, 275, 571, 640, 1135, 1537, 1673
RseI CAYNNNNRTG 1 cut(s) 1655
SacI GAGCTC 2 cut(s) 51, 857
SaqAI TTAA 9 cut(s) 105, 288, 438, 537, 680, 728, 1289, 1455, 1727
SatI GCNGC 4 cut(s) 65, 1012, 1568, 1686
Sau3AI GATC 5 cut(s) 226, 584, 909, 1125, 1589
Sau96I GGNCC 2 cut(s) 504, 523
SchI GAGTC 8 cut(s) 2, 8, 457, 714, 925, 1382, 1488, 1826
ScrFI CCNGG 4 cut(s) 111, 589, 1082, 1608
SduI GDGCHC 2 cut(s) 51, 857
SfaNI GCATC 7 cut(s) 51, 86, 754, 1162, 1224, 1637, 1814
SfcI CTRYAG 1 cut(s) 847
Sfr274I CTCGAG 1 cut(s) 1261
SinI GGWCC 2 cut(s) 504, 523
SlaI CTCGAG 1 cut(s) 1261
SmiMI CAYNNNNRTG 1 cut(s) 1655
SmlI CTYRAG 5 cut(s) 50, 679, 914, 1233, 1261
SmoI CTYRAG 5 cut(s) 50, 679, 914, 1233, 1261
SpeI ACTAGT 1 cut(s) 578
SspI AATATT 2 cut(s) 1122, 1303
SspMI CTAG 8 cut(s) 120, 306, 495, 528, 579, 717, 1353, 1598
SstI GAGCTC 2 cut(s) 51, 857
StyD4I CCNGG 4 cut(s) 109, 587, 1080, 1606
TaaI ACNGT 2 cut(s) 326, 1520
TaqI TCGA 3 cut(s) 1170, 1262, 1311
TatI WGTACW 5 cut(s) 274, 570, 639, 1134, 1672
TfiI GAWTC 8 cut(s) 99, 196, 903, 1085, 1095, 1276, 1318, 1619
Tru1I TTAA 9 cut(s) 105, 288, 438, 537, 680, 728, 1289, 1455, 1727
Tru9I TTAA 9 cut(s) 105, 288, 438, 537, 680, 728, 1289, 1455, 1727
TscAI CASTG 3 cut(s) 331, 904, 1860
TseI GCWGC 4 cut(s) 64, 1011, 1567, 1685
TspRI CASTG 3 cut(s) 331, 904, 1860
Vha464I CTTAAG 1 cut(s) 679
VpaK11BI GGWCC 2 cut(s) 504, 523
XagI CCTNNNNNAGG 1 cut(s) 498
XapI RAATTY 4 cut(s) 331, 487, 866, 1824
XceI RCATGY 1 cut(s) 1141
XhoI CTCGAG 1 cut(s) 1261
XmnI GAANNNNTTC 1 cut(s) 1208
XspI CTAG 8 cut(s) 120, 306, 495, 528, 579, 717, 1353, 1598
Zsp2I ATGCAT 2 cut(s) 1564, 1652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.