gal1,galk
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1275000.v1.1 |
| pyrus_communis | pycom09g18560 |
| rosa_chinensis | RchiOBHm_Chr2g0091411 RchiOBHm_Chr4g0385481 |
| rosa_laevigata | RLG00000015648 RLG00000022082 |
| rosa_multiflora | Rmu_ssc0000272.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00022250 |
| rosa_rugosa | Rorug02G0229700 Rorug02G0546400 Rorug02G0546500 Rorug02G0546600 |
| rosa_samantha | Rh1AG195500 Rh1CG179900 Rh2AG485800 Rh2AG667300 Rh2BG482500 Rh2BG678800 Rh2CG275400 Rh2CG471600 Rh2CG508300 Rh2DG491300 Rh4CG006700 Rh4CG006800 Rh5CG262600 Rh7DG361300 |
| rosa_wichuraiana | Rw2G040510 Rw4G000400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 131 |
| AfaI | GTAC | 2 cut(s) | 124, 150 |
| AjnI | CCWGG | 1 cut(s) | 144 |
| Alw21I | GWGCWC | 1 cut(s) | 170 |
| Alw26I | GTCTC | 1 cut(s) | 234 |
| Alw44I | GTGCAC | 1 cut(s) | 166 |
| AlwI | GGATC | 1 cut(s) | 131 |
| ApaLI | GTGCAC | 1 cut(s) | 166 |
| AsuC2I | CCSGG | 1 cut(s) | 239 |
| BaeGI | GKGCMC | 1 cut(s) | 170 |
| BbsI | GAAGAC | 1 cut(s) | 309 |
| Bbv12I | GWGCWC | 1 cut(s) | 170 |
| BccI | CCATC | 2 cut(s) | 204, 219 |
| BceAI | ACGGC | 1 cut(s) | 49 |
| BciT130I | CCWGG | 1 cut(s) | 146 |
| BclI | TGATCA | 1 cut(s) | 273 |
| BcnI | CCSGG | 1 cut(s) | 239 |
| BcoDI | GTCTC | 1 cut(s) | 234 |
| BfmI | CTRYAG | 1 cut(s) | 186 |
| BglII | AGATCT | 1 cut(s) | 158 |
| Bme1390I | CCNGG | 2 cut(s) | 146, 239 |
| BmrFI | CCNGG | 2 cut(s) | 146, 239 |
| BpiI | GAAGAC | 1 cut(s) | 309 |
| BpuMI | CCSGG | 1 cut(s) | 239 |
| BsaI | GGTCTC | 1 cut(s) | 234 |
| Bse1I | ACTGG | 2 cut(s) | 171, 300 |
| BseBI | CCWGG | 1 cut(s) | 146 |
| BseGI | GGATG | 1 cut(s) | 230 |
| BseNI | ACTGG | 2 cut(s) | 171, 300 |
| BseSI | GKGCMC | 1 cut(s) | 170 |
| BsiHKAI | GWGCWC | 1 cut(s) | 170 |
| BsiSI | CCGG | 1 cut(s) | 238 |
| BsmAI | GTCTC | 1 cut(s) | 234 |
| Bso31I | GGTCTC | 1 cut(s) | 234 |
| Bsp1286I | GDGCHC | 1 cut(s) | 170 |
| Bsp143I | GATC | 3 cut(s) | 136, 158, 273 |
| BspPI | GGATC | 1 cut(s) | 131 |
| BspTNI | GGTCTC | 1 cut(s) | 234 |
| BsrI | ACTGG | 2 cut(s) | 171, 300 |
| BssMI | GATC | 3 cut(s) | 136, 158, 273 |
| Bst2UI | CCWGG | 1 cut(s) | 146 |
| Bst4CI | ACNGT | 2 cut(s) | 181, 269 |
| BstF5I | GGATG | 1 cut(s) | 230 |
| BstKTI | GATC | 3 cut(s) | 139, 161, 276 |
| BstMAI | GTCTC | 1 cut(s) | 234 |
| BstMBI | GATC | 3 cut(s) | 136, 158, 273 |
| BstNI | CCWGG | 1 cut(s) | 146 |
| BstSCI | CCNGG | 2 cut(s) | 144, 237 |
| BstSFI | CTRYAG | 1 cut(s) | 186 |
| BstSLI | GKGCMC | 1 cut(s) | 170 |
| BstV2I | GAAGAC | 1 cut(s) | 309 |
| BstX2I | RGATCY | 1 cut(s) | 158 |
| BstYI | RGATCY | 1 cut(s) | 158 |
| BtsCI | GGATG | 1 cut(s) | 230 |
| BtsIMutI | CAGTG | 3 cut(s) | 178, 250, 293 |
| CsiI | ACCWGGT | 1 cut(s) | 144 |
| Csp6I | GTAC | 2 cut(s) | 123, 149 |
| CviAII | CATG | 1 cut(s) | 277 |
| CviJI | RGCY | 1 cut(s) | 214 |
| CviKI_1 | RGCY | 1 cut(s) | 214 |
| CviQI | GTAC | 2 cut(s) | 123, 149 |
| DpnI | GATC | 3 cut(s) | 138, 160, 275 |
| DpnII | GATC | 3 cut(s) | 136, 158, 273 |
| Eco31I | GGTCTC | 1 cut(s) | 234 |
| EcoRII | CCWGG | 1 cut(s) | 144 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 6 cut(s) | 43, 45, 86, 114, 206, 278 |
| FatI | CATG | 1 cut(s) | 276 |
| FbaI | TGATCA | 1 cut(s) | 273 |
| FokI | GGATG | 1 cut(s) | 237 |
| HapII | CCGG | 1 cut(s) | 238 |
| Hin1II | CATG | 1 cut(s) | 280 |
| HinfI | GANTC | 1 cut(s) | 8 |
| HpaII | CCGG | 1 cut(s) | 238 |
| Hpy166II | GTNNAC | 2 cut(s) | 123, 168 |
| Hpy188I | TCNGA | 3 cut(s) | 158, 224, 234 |
| Hpy8I | GTNNAC | 2 cut(s) | 123, 168 |
| Hpy99I | CGWCG | 1 cut(s) | 325 |
| HpyAV | CCTTC | 4 cut(s) | 65, 73, 245, 276 |
| HpyCH4III | ACNGT | 2 cut(s) | 181, 269 |
| HpyCH4IV | ACGT | 1 cut(s) | 323 |
| HpyCH4V | TGCA | 1 cut(s) | 168 |
| HpySE526I | ACGT | 1 cut(s) | 323 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| Ksp22I | TGATCA | 1 cut(s) | 273 |
| Kzo9I | GATC | 3 cut(s) | 136, 158, 273 |
| MabI | ACCWGGT | 1 cut(s) | 144 |
| MaeII | ACGT | 1 cut(s) | 323 |
| MaeIII | GTNAC | 1 cut(s) | 291 |
| MalI | GATC | 3 cut(s) | 138, 160, 275 |
| MboI | GATC | 3 cut(s) | 136, 158, 273 |
| MboII | GAAGA | 2 cut(s) | 260, 314 |
| MflI | RGATCY | 1 cut(s) | 158 |
| MhlI | GDGCHC | 1 cut(s) | 170 |
| MluCI | AATT | 2 cut(s) | 90, 152 |
| MnlI | CCTC | 1 cut(s) | 57 |
| MseI | TTAA | 2 cut(s) | 102, 329 |
| MslI | CAYNNNNRTG | 1 cut(s) | 223 |
| MspI | CCGG | 1 cut(s) | 238 |
| MspR9I | CCNGG | 2 cut(s) | 146, 239 |
| MvaI | CCWGG | 1 cut(s) | 146 |
| NciI | CCSGG | 1 cut(s) | 239 |
| NdeII | GATC | 3 cut(s) | 136, 158, 273 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NmuCI | GTSAC | 1 cut(s) | 291 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| Psp6I | CCWGG | 1 cut(s) | 144 |
| PspGI | CCWGG | 1 cut(s) | 144 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 169, 201 |
| PsuI | RGATCY | 1 cut(s) | 158 |
| RsaI | GTAC | 2 cut(s) | 124, 150 |
| RsaNI | GTAC | 2 cut(s) | 123, 149 |
| RseI | CAYNNNNRTG | 1 cut(s) | 223 |
| SaqAI | TTAA | 2 cut(s) | 102, 329 |
| Sau3AI | GATC | 3 cut(s) | 136, 158, 273 |
| ScrFI | CCNGG | 2 cut(s) | 146, 239 |
| SduI | GDGCHC | 1 cut(s) | 170 |
| SetI | ASST | 5 cut(s) | 84, 150, 193, 287, 326 |
| SexAI | ACCWGGT | 1 cut(s) | 144 |
| SfcI | CTRYAG | 1 cut(s) | 186 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 223 |
| Sse9I | AATT | 2 cut(s) | 90, 152 |
| StyD4I | CCNGG | 2 cut(s) | 144, 237 |
| TaaI | ACNGT | 2 cut(s) | 181, 269 |
| TaiI | ACGT | 1 cut(s) | 326 |
| TasI | AATT | 2 cut(s) | 90, 152 |
| TatI | WGTACW | 1 cut(s) | 122 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| Tru1I | TTAA | 2 cut(s) | 102, 329 |
| Tru9I | TTAA | 2 cut(s) | 102, 329 |
| TscAI | CASTG | 3 cut(s) | 178, 250, 300 |
| TseFI | GTSAC | 1 cut(s) | 291 |
| Tsp45I | GTSAC | 1 cut(s) | 291 |
| TspDTI | ATGAA | 1 cut(s) | 129 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| TspRI | CASTG | 3 cut(s) | 178, 250, 300 |
| VneI | GTGCAC | 1 cut(s) | 166 |