Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005927

Physical Location & Seq

Genomic Coordinates Forward (+)

67517137 .. 67524173

Gene Structure 7037 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0546500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGGTAAAATAAGAAACGATGAATTACCAATGCTACCTTCACAATTACCATCCAGTTACGAGAATACATTTAGTTCCATTCCTGTCAATTCAATGGAATCCAGTGGAACTGGAATTGGCCGTGTTGACCATACAGGTTCCTTACAGATTGATAGCAAAAATCCTTTCACACCTGCATGTGTTCCATTCCAGCAGTTTACAGATTGCAATGATCCTCACTGCACATTTTGCAAACCACGTCATAGTTTGAAATCAGTTCAACACAAAAACTACATAGCTTCAAGCTTGTTTGATCATAAGCTCCATAATATTCTGTATGGTGATGCTAAAGGATGGTTTAAAAGAACCTGTTCTTTTCTGTATCCATATGTTCTCGGAGTTGTGAACCCTGATGCTAAAGCTGTACGAGGATGGAACAAGTTCTTTGTCATATCTTGCATGGTGGCAGTTTTTGTAGACCCGCTATTTTTCTTCTTGTTATCTGCACGAGAGGATTATAAGTGCATAACTATTAACTGGGCCATGACCATAATATTAGTGTTTTTCCGGACACTGACGGACTTCATTTACCTATTGCACATGCTTCTTCAGTTTAGGTTGGCTTACGTGGCTCCTGGGTCTAGAGTGGTTGGTACGGGAGAGATAGTAGACCAACCATATAAAATTGCTCTCAATTATCTCCATGGAAACTTTTTAGTCGACTTAATTATTGTTTTGCCGCTTCCTCAGATCATAATGTTGTCGGTTGTTCCTTTGGGATCGTTTCGAGCAAATCAAACAAAGAATCTTCTCCGCCTGGCAGTATTTTTTCAATACTTTCCCAGGTTGTATAGGGTTCTGCCCCTGCTTGGTGGTCAATCTCCAAATGGATTCTTTGTATTTGAGTCAGCTTGGACAAATTTTTTTATAAACACTCTCACTTTCTTGTTGGTTGGCCATGTTATTGGGTCATGCTGGTACCTTCTTGGCTTACAGAGGGTTAACCAATGTCTTCGAGATGCCTGCCATAACTCTAATCTGCAGTCATGCGGGAATTTAATAGATTGTTGCAATGCTCAATCTATTCCAGAGTCAACTAGATGGAGAGAAAATGAGAAGGCTGCTGGTTGTTTTAATCCGGAAGGAGATTTCTCCTATGGAATATATACTCCAGTTGTCAATCTCACTACAAGAGATAGCATGACTAAATATTTATACTCACTGTTTTGGGGATTCCAGCAAATCAGCACTTTGGCAGGAAATCAAACTCCAAGCTATTTTAATGGGGAAATTGTTTTTACCATGGTAATTATTGGACTGGGACTCTTCTTCTTTGCTCTTCTAATTGGAAATATGCAGAATTTTCTTCAGTCTCTTGGACGGAGGAGGTTTGATATGTTATTGCGGAGTCGTGATGTTGAGCAGTGGATGAGTTATAGGAACTTACCAGAAGAGCTTAGAAGGCAAGTAAGAAATGCTGAACGGTATAATTGGTCTGCCACACAAGGTGTAAATGAAGAACTGATTCTGGAAAATTTGCCCGAACACCTTCAAAGAAATATAAGACGCCATCTCTTCGAATTTGTGAAGAAAGTTCGGATTTTTGCTCTGATGGACGATCCTATCTTAGATGCAATATGTGAGAAACTAAAACAAAAAACATACATTGAAGGAAATGAAATTTTGTATCCTGGAGGTATGGTTGAGAATATGGTTTTTATTGTGCGTGGAAAGATGGAGAGCATTGGGGCGGATGGGACTGTTGATGACACATTAAAGGAAGGTGATGTTTGTGGTGAGGAACTTCTCAGATGGTGTCTTGAGGCTTCTGTAAACACTGATGGGAAAAATGTCAGGATTACTGGTCGGAGATTGCTCAGCAACAGATTGGTAAGGTGCTTAACTAACGTGGAAGCATTTCAACTCCGAGCTGCAGACCTCGAACAGTTCACTGCACGTTTTGCAAGATACTTGCGGAATCCACGTGTGCAAGGAGCCATAAGGTATGAATCTCCGTACTGGAGAGGGCTTGCAGCAAAGCGAATTCAAGTAGCTTGGAGGTACAGGCAAAAGCGTCTAAATCGCACAAGCCCACAGAGTTGCCCCCGAAACCCTTACTCCGATCAAAGTGCAGCGGACTTCTTGAGATCAACTTATCGCCCACATAGTTGGGGACTTGGAAATGATGCTCGGGAGCGGGAACACTGGGGCCTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004335 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006012 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019318 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046835 GO:0071704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GHMP_kinases_C GHMP_kinases_N GalKase_gal_bdg

Protein Analysis

732

Amino Acids

84.23

Weight (kDa)

9.03

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	140 - 455	3e-19	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005927)

Species	Orthologous Gene IDs
malus_domestica	MD09G1275000.v1.1
pyrus_communis	pycom09g18560
rosa_chinensis	RchiOBHm_Chr2g0091411 RchiOBHm_Chr4g0385481
rosa_laevigata	RLG00000015648 RLG00000022082
rosa_multiflora	Rmu_ssc0000272.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022250
rosa_rugosa	Rorug02G0229700 Rorug02G0546400 Rorug02G0546500 Rorug02G0546600
rosa_samantha	Rh1AG195500 Rh1CG179900 Rh2AG485800 Rh2AG667300 Rh2BG482500 Rh2BG678800 Rh2CG275400 Rh2CG471600 Rh2CG508300 Rh2DG491300 Rh4CG006700 Rh4CG006800 Rh5CG262600 Rh7DG361300
rosa_wichuraiana	Rw2G040510 Rw4G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	498, 908
AarI	CACCTGC	1 cut(s)	181
Acc36I	ACCTGC	1 cut(s)	181
Acc65I	GGTACC	1 cut(s)	957
AccB1I	GGYRCC	1 cut(s)	957
AccBSI	CCGCTC	1 cut(s)	2176
AccI	GTMKAC	3 cut(s)	456, 648, 699
AccIII	TCCGGA	2 cut(s)	546, 1117
AciI	CCGC	9 cut(s)	461, 719, 793, 1029, 1384, 1730, 1954, 2114, 2176
AclWI	GGATC	3 cut(s)	206, 766, 1592
AcoI	YGGCCR	2 cut(s)	118, 934
AcsI	RAATTY	7 cut(s)	898, 1033, 1339, 1513, 1559, 1659, 2022
AcuI	CTGAAG	2 cut(s)	572, 1331
AcvI	CACGTG	1 cut(s)	1964
AcyI	GRCGYC	1 cut(s)	1546
AdeI	CACNNNGTG	1 cut(s)	1487
AfaI	GTAC	5 cut(s)	405, 634, 959, 1997, 2042
AfiI	CCNNNNNNNGG	1 cut(s)	848
AflIII	ACRYGT	1 cut(s)	1963
AgsI	TTSAA	9 cut(s)	93, 250, 260, 282, 812, 1532, 1649, 1901, 2027
AjiI	CACGTC	1 cut(s)	239
AjnI	CCWGG	4 cut(s)	613, 795, 821, 1669
AjuI	GAANNNNNNNTTGG	2 cut(s)	22, 54
AluBI	AGCT	9 cut(s)	278, 285, 301, 401, 890, 1254, 1435, 1910, 2033
AluI	AGCT	9 cut(s)	278, 285, 301, 401, 890, 1254, 1435, 1910, 2033
Alw26I	GTCTC	1 cut(s)	1356
AlwI	GGATC	3 cut(s)	206, 766, 1592
Ama87I	CYCGRG	1 cut(s)	2169
Aor13HI	TCCGGA	2 cut(s)	546, 1117
AoxI	GGCC	4 cut(s)	118, 519, 934, 2188
ApeKI	GCWGC	4 cut(s)	1100, 1910, 2012, 2111
ApoI	RAATTY	7 cut(s)	898, 1033, 1339, 1513, 1559, 1659, 2022
Asp700I	GAANNNNTTC	5 cut(s)	349, 419, 1503, 1527, 1896
Asp718I	GGTACC	1 cut(s)	957
AspS9I	GGNCC	2 cut(s)	519, 2188
AsuHPI	GGTGA	3 cut(s)	332, 1775, 1787
AsuII	TTCGAA	1 cut(s)	1557
AvaI	CYCGRG	1 cut(s)	2169
BalI	TGGCCA	1 cut(s)	936
BanI	GGYRCC	1 cut(s)	957
BauI	CACGAG	1 cut(s)	486
BbrPI	CACGTG	1 cut(s)	1964
BbsI	GAAGAC	1 cut(s)	983
BbvI	GCAGC	4 cut(s)	1087, 1897, 2024, 2123
BceAI	ACGGC	1 cut(s)	105
BcgI	CGANNNNNNTGC	4 cut(s)	984, 1018, 2090, 2124
BciT130I	CCWGG	4 cut(s)	615, 797, 823, 1671
BciVI	GTATCC	2 cut(s)	372, 1677
BclI	TGATCA	1 cut(s)	292
BcoDI	GTCTC	1 cut(s)	1356
BfaI	CTAG	2 cut(s)	621, 1077
BfmI	CTRYAG	2 cut(s)	1019, 1911
BfuAI	ACCTGC	1 cut(s)	181
BfuI	GTATCC	2 cut(s)	372, 1677
BisI	GCNGC	5 cut(s)	719, 1101, 1911, 2013, 2112
BlpI	GCTNAGC	1 cut(s)	1856
BlsI	GCNGC	5 cut(s)	720, 1102, 1912, 2014, 2113
Bme1390I	CCNGG	4 cut(s)	615, 797, 823, 1671
BmeT110I	CYCGRG	1 cut(s)	2169
BmgBI	CACGTC	1 cut(s)	239
BmgT120I	GGNCC	2 cut(s)	519, 2188
BmiI	GGNNCC	5 cut(s)	139, 612, 959, 1975, 2189
BmrFI	CCNGG	4 cut(s)	615, 797, 823, 1671
BmrI	ACTGGG	3 cut(s)	526, 1307, 2194
BmsI	GCATC	5 cut(s)	313, 382, 988, 1600, 2155
BmuI	ACTGGG	3 cut(s)	526, 1307, 2194
BpiI	GAAGAC	1 cut(s)	983
BpmI	CTGGAG	3 cut(s)	1134, 1692, 2020
Bpu1102I	GCTNAGC	1 cut(s)	1856
Bpu14I	TTCGAA	1 cut(s)	1557
BpuEI	CTTGAG	2 cut(s)	1820, 2143
BsaAI	YACGTR	2 cut(s)	607, 1964
BsaHI	GRCGYC	1 cut(s)	1546
BsaJI	CCNNGG	4 cut(s)	614, 682, 821, 1281
BsaWI	WCCGGW	2 cut(s)	546, 1117
BsaXI	ACNNNNNCTCC	6 cut(s)	630, 660, 1665, 1695, 2081, 2111
Bsc4I	CCNNNNNNNGG	1 cut(s)	848
Bse1I	ACTGG	9 cut(s)	54, 102, 115, 521, 1151, 1302, 1846, 2003, 2189
Bse3DI	GCAATG	2 cut(s)	214, 1057
BseAI	TCCGGA	2 cut(s)	546, 1117
BseBI	CCWGG	4 cut(s)	615, 797, 823, 1671
BseDI	CCNNGG	4 cut(s)	614, 682, 821, 1281
BseGI	GGATG	5 cut(s)	50, 338, 416, 1413, 1738
BseLI	CCNNNNNNNGG	1 cut(s)	848
BseMI	GCAATG	2 cut(s)	214, 1057
BseMII	CTCAG	3 cut(s)	740, 1801, 1870
BseNI	ACTGG	9 cut(s)	54, 102, 115, 521, 1151, 1302, 1846, 2003, 2189
BseRI	GAGGAG	1 cut(s)	1378
BseXI	GCAGC	4 cut(s)	1087, 1897, 2024, 2123
BsgI	GTGCAG	4 cut(s)	205, 468, 1917, 2130
BshFI	GGCC	4 cut(s)	120, 521, 936, 2190
BshNI	GGYRCC	1 cut(s)	957
BsiHKCI	CYCGRG	1 cut(s)	2169
BsiSI	CCGG	2 cut(s)	547, 1118
BslFI	GGGAC	3 cut(s)	1314, 1750, 2166
BslI	CCNNNNNNNGG	1 cut(s)	848
BsmAI	GTCTC	1 cut(s)	1356
BsmFI	GGGAC	3 cut(s)	1314, 1750, 2166
BsnI	GGCC	4 cut(s)	120, 521, 936, 2190
BsoBI	CYCGRG	1 cut(s)	2169
Bsp119I	TTCGAA	1 cut(s)	1557
Bsp13I	TCCGGA	2 cut(s)	546, 1117
Bsp143I	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
Bsp1720I	GCTNAGC	1 cut(s)	1856
Bsp19I	CCATGG	2 cut(s)	682, 1281
BspACI	CCGC	9 cut(s)	461, 719, 793, 1029, 1384, 1730, 1954, 2114, 2176
BspANI	GGCC	4 cut(s)	120, 521, 936, 2190
BspCNI	CTCAG	3 cut(s)	739, 1800, 1869
BspEI	TCCGGA	2 cut(s)	546, 1117
BspLI	GGNNCC	5 cut(s)	139, 612, 959, 1975, 2189
BspMAI	CTGCAG	2 cut(s)	1023, 1915
BspMI	ACCTGC	1 cut(s)	181
BspPI	GGATC	3 cut(s)	206, 766, 1592
BspQI	GCTCTTC	2 cut(s)	1323, 1425
BspT104I	TTCGAA	1 cut(s)	1557
BspT107I	GGYRCC	1 cut(s)	957
BsrBI	CCGCTC	1 cut(s)	2176
BsrDI	GCAATG	2 cut(s)	214, 1057
BsrI	ACTGG	9 cut(s)	54, 102, 115, 521, 1151, 1302, 1846, 2003, 2189
BssECI	CCNNGG	4 cut(s)	614, 682, 821, 1281
BssMI	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
BssNI	GRCGYC	1 cut(s)	1546
BssSI	CACGAG	1 cut(s)	486
BssT1I	CCWWGG	2 cut(s)	682, 1281
Bst2BI	CACGAG	1 cut(s)	486
Bst2UI	CCWGG	4 cut(s)	615, 797, 823, 1671
Bst4CI	ACNGT	4 cut(s)	1203, 1464, 1741, 1926
Bst6I	CTCTTC	4 cut(s)	1310, 1323, 1425, 1559
BstACI	GRCGYC	1 cut(s)	1546
BstAPI	GCANNNNNTGC	2 cut(s)	228, 1940
BstBAI	YACGTR	2 cut(s)	607, 1964
BstBI	TTCGAA	1 cut(s)	1557
BstC8I	GCNNGC	2 cut(s)	1003, 2010
BstDEI	CTNAG	5 cut(s)	726, 1436, 1606, 1787, 1856
BstDSI	CCRYGG	2 cut(s)	682, 1281
BstF5I	GGATG	5 cut(s)	50, 338, 416, 1413, 1738
BstKTI	GATC	7 cut(s)	214, 295, 732, 761, 1600, 2104, 2129
BstMAI	GTCTC	1 cut(s)	1356
BstMBI	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
BstMWI	GCNNNNNNNGC	4 cut(s)	228, 608, 1441, 1940
BstNI	CCWGG	4 cut(s)	615, 797, 823, 1671
BstNSI	RCATGY	2 cut(s)	180, 583
BstSCI	CCNGG	4 cut(s)	613, 795, 821, 1669
BstSFI	CTRYAG	2 cut(s)	1019, 1911
BstV1I	GCAGC	4 cut(s)	1087, 1897, 2024, 2123
BstV2I	GAAGAC	1 cut(s)	983
BstXI	CCANNNNNNTGG	2 cut(s)	944, 2148
BsuI	GTATCC	2 cut(s)	372, 1677
BsuRI	GGCC	4 cut(s)	120, 521, 936, 2190
BtgI	CCRYGG	2 cut(s)	682, 1281
BtrI	CACGTC	1 cut(s)	239
BtsCI	GGATG	5 cut(s)	50, 338, 416, 1413, 1738
BtsI	GCAGTG	3 cut(s)	217, 1409, 1929
BtsIMutI	CAGTG	8 cut(s)	109, 217, 551, 1199, 1409, 1815, 1929, 2182
BveI	ACCTGC	1 cut(s)	181
Cac8I	GCNNGC	2 cut(s)	1003, 2010
Cfr13I	GGNCC	2 cut(s)	519, 2188
CseI	GACGC	2 cut(s)	1554, 2042
Csp6I	GTAC	5 cut(s)	404, 633, 958, 1996, 2041
CviQI	GTAC	5 cut(s)	404, 633, 958, 1996, 2041
DdeI	CTNAG	5 cut(s)	726, 1436, 1606, 1787, 1856
DpnI	GATC	7 cut(s)	213, 294, 731, 760, 1599, 2103, 2128
DpnII	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
DraI	TTTAAA	1 cut(s)	340
DraIII	CACNNNGTG	1 cut(s)	1487
EaeI	YGGCCR	2 cut(s)	118, 934
Eam1104I	CTCTTC	4 cut(s)	1310, 1323, 1425, 1559
EarI	CTCTTC	4 cut(s)	1310, 1323, 1425, 1559
EciI	GGCGGA	2 cut(s)	782, 1745
Eco130I	CCWWGG	2 cut(s)	682, 1281
Eco57I	CTGAAG	2 cut(s)	572, 1331
Eco72I	CACGTG	1 cut(s)	1964
Eco88I	CYCGRG	1 cut(s)	2169
EcoO109I	RGGNCCY	1 cut(s)	2188
EcoRI	GAATTC	1 cut(s)	2022
EcoRII	CCWGG	4 cut(s)	613, 795, 821, 1669
EcoT14I	CCWWGG	2 cut(s)	682, 1281
ErhI	CCWWGG	2 cut(s)	682, 1281
FaqI	GGGAC	3 cut(s)	1314, 1750, 2166
FauI	CCCGC	3 cut(s)	468, 1022, 2169
FauNDI	CATATG	1 cut(s)	367
FbaI	TGATCA	1 cut(s)	292
FblI	GTMKAC	3 cut(s)	456, 648, 699
Fnu4HI	GCNGC	5 cut(s)	719, 1101, 1911, 2013, 2112
FokI	GGATG	5 cut(s)	37, 345, 423, 1420, 1745
Fsp4HI	GCNGC	5 cut(s)	719, 1101, 1911, 2013, 2112
FspBI	CTAG	2 cut(s)	621, 1077
GluI	GCNGC	5 cut(s)	719, 1101, 1911, 2013, 2112
GsuI	CTGGAG	3 cut(s)	1134, 1692, 2020
HaeIII	GGCC	4 cut(s)	120, 521, 936, 2190
HapII	CCGG	2 cut(s)	547, 1118
HgaI	GACGC	2 cut(s)	1554, 2042
Hin1I	GRCGYC	1 cut(s)	1546
HincII	GTYRAC	4 cut(s)	127, 700, 982, 1074
HindII	GTYRAC	4 cut(s)	127, 700, 982, 1074
HindIII	AAGCTT	1 cut(s)	283
HpaI	GTTAAC	1 cut(s)	982
HpaII	CCGG	2 cut(s)	547, 1118
HphI	GGTGA	3 cut(s)	332, 1775, 1787
Hpy188I	TCNGA	9 cut(s)	377, 729, 1578, 1590, 1790, 1848, 1907, 2101, 2198
HpyAV	CCTTC	8 cut(s)	48, 971, 1090, 1115, 1434, 1538, 1643, 1754
HpyCH4III	ACNGT	4 cut(s)	1203, 1464, 1741, 1926
HpyCH4IV	ACGT	5 cut(s)	238, 606, 1887, 1936, 1963
HpyF10VI	GCNNNNNNNGC	4 cut(s)	228, 608, 1441, 1940
HpyF3I	CTNAG	5 cut(s)	726, 1436, 1606, 1787, 1856
HpySE526I	ACGT	5 cut(s)	238, 606, 1887, 1936, 1963
Hsp92I	GRCGYC	1 cut(s)	1546
Kpn2I	TCCGGA	2 cut(s)	546, 1117
KpnI	GGTACC	1 cut(s)	961
Ksp22I	TGATCA	1 cut(s)	292
KspAI	GTTAAC	1 cut(s)	982
Kzo9I	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
LguI	GCTCTTC	2 cut(s)	1323, 1425
LmnI	GCTCC	4 cut(s)	306, 616, 1973, 2173
Lsp1109I	GCAGC	4 cut(s)	1087, 1897, 2024, 2123
LweI	GCATC	5 cut(s)	313, 382, 988, 1600, 2155
MaeI	CTAG	2 cut(s)	621, 1077
MaeII	ACGT	5 cut(s)	238, 606, 1887, 1936, 1963
MaeIII	GTNAC	1 cut(s)	56
MalI	GATC	7 cut(s)	213, 294, 731, 760, 1599, 2103, 2128
MbiI	CCGCTC	1 cut(s)	2176
MboI	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
MlsI	TGGCCA	1 cut(s)	936
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	4 cut(s)	893, 1079, 1296, 1396
MmeI	TCCRAC	1 cut(s)	1826
Mox20I	TGGCCA	1 cut(s)	936
MroI	TCCGGA	2 cut(s)	546, 1117
MroXI	GAANNNNTTC	5 cut(s)	349, 419, 1503, 1527, 1896
MscI	TGGCCA	1 cut(s)	936
MseI	TTAA	9 cut(s)	339, 513, 704, 981, 1037, 1113, 1260, 1754, 1880
MslI	CAYNNNNRTG	1 cut(s)	175
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	1 cut(s)	2114
MspI	CCGG	2 cut(s)	547, 1118
MspR9I	CCNGG	4 cut(s)	615, 797, 823, 1671
MvaI	CCWGG	4 cut(s)	615, 797, 823, 1671
MwoI	GCNNNNNNNGC	4 cut(s)	228, 608, 1441, 1940
NcoI	CCATGG	2 cut(s)	682, 1281
NdeI	CATATG	1 cut(s)	367
NdeII	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
NlaIV	GGNNCC	5 cut(s)	139, 612, 959, 1975, 2189
NspI	RCATGY	2 cut(s)	180, 583
NspV	TTCGAA	1 cut(s)	1557
PaqCI	CACCTGC	1 cut(s)	181
PciSI	GCTCTTC	2 cut(s)	1323, 1425
PdmI	GAANNNNTTC	5 cut(s)	349, 419, 1503, 1527, 1896
PfeI	GAWTC	7 cut(s)	98, 784, 870, 1212, 1504, 1957, 1988
PfoI	TCCNGGA	1 cut(s)	1669
PkrI	GCNGC	5 cut(s)	720, 1102, 1912, 2014, 2113
PleI	GAGTC	4 cut(s)	892, 1078, 1296, 1395
PmaCI	CACGTG	1 cut(s)	1964
PmlI	CACGTG	1 cut(s)	1964
PpsI	GAGTC	4 cut(s)	892, 1078, 1296, 1395
Ppu21I	YACGTR	2 cut(s)	607, 1964
PsiI	TTATAA	2 cut(s)	498, 908
Psp6I	CCWGG	4 cut(s)	613, 795, 821, 1669
PspCI	CACGTG	1 cut(s)	1964
PspGI	CCWGG	4 cut(s)	613, 795, 821, 1669
PspN4I	GGNNCC	5 cut(s)	139, 612, 959, 1975, 2189
PspPI	GGNCC	2 cut(s)	519, 2188
PstI	CTGCAG	2 cut(s)	1023, 1915
RsaI	GTAC	5 cut(s)	405, 634, 959, 1997, 2042
RsaNI	GTAC	5 cut(s)	404, 633, 958, 1996, 2041
RseI	CAYNNNNRTG	1 cut(s)	175
SalI	GTCGAC	1 cut(s)	698
SapI	GCTCTTC	2 cut(s)	1323, 1425
SaqAI	TTAA	9 cut(s)	339, 513, 704, 981, 1037, 1113, 1260, 1754, 1880
SatI	GCNGC	5 cut(s)	719, 1101, 1911, 2013, 2112
Sau3AI	GATC	7 cut(s)	211, 292, 729, 758, 1597, 2101, 2126
Sau96I	GGNCC	2 cut(s)	519, 2188
SchI	GAGTC	4 cut(s)	893, 1079, 1296, 1396
ScrFI	CCNGG	4 cut(s)	615, 797, 823, 1671
SfaNI	GCATC	5 cut(s)	313, 382, 988, 1600, 2155
SfcI	CTRYAG	2 cut(s)	1019, 1911
SfuI	TTCGAA	1 cut(s)	1557
SmiMI	CAYNNNNRTG	1 cut(s)	175
SmlI	CTYRAG	2 cut(s)	1799, 2122
SmoI	CTYRAG	2 cut(s)	1799, 2122
SsiI	CCGC	9 cut(s)	461, 719, 793, 1029, 1384, 1730, 1954, 2114, 2176
SspI	AATATT	3 cut(s)	310, 534, 1190
SspMI	CTAG	2 cut(s)	621, 1077
StyD4I	CCNGG	4 cut(s)	613, 795, 821, 1669
StyI	CCWWGG	2 cut(s)	682, 1281
TaaI	ACNGT	4 cut(s)	1203, 1464, 1741, 1926
TaiI	ACGT	5 cut(s)	241, 609, 1890, 1939, 1966
TaqI	TCGA	5 cut(s)	699, 766, 994, 1557, 1920
TauI	GCSGC	1 cut(s)	721
TfiI	GAWTC	7 cut(s)	98, 784, 870, 1212, 1504, 1957, 1988
Tru1I	TTAA	9 cut(s)	339, 513, 704, 981, 1037, 1113, 1260, 1754, 1880
Tru9I	TTAA	9 cut(s)	339, 513, 704, 981, 1037, 1113, 1260, 1754, 1880
TscAI	CASTG	8 cut(s)	109, 224, 558, 1206, 1409, 1822, 1936, 2189
TseI	GCWGC	4 cut(s)	1100, 1910, 2012, 2111
TspDTI	ATGAA	5 cut(s)	36, 553, 1509, 1671, 2001
TspGWI	ACGGA	3 cut(s)	572, 1375, 1983
TspRI	CASTG	8 cut(s)	109, 224, 558, 1206, 1409, 1822, 1936, 2189
XapI	RAATTY	7 cut(s)	898, 1033, 1339, 1513, 1559, 1659, 2022
XbaI	TCTAGA	1 cut(s)	620
XceI	RCATGY	2 cut(s)	180, 583
XmiI	GTMKAC	3 cut(s)	456, 648, 699
XmnI	GAANNNNTTC	5 cut(s)	349, 419, 1503, 1527, 1896
XspI	CTAG	2 cut(s)	621, 1077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.