Core-2/I-Branching enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16170 |
| fragaria_vesca | FvH4_7g07190 |
| malus_domestica | MD09G1254700.v1.1 MD17G1247300.v1.1 |
| prunus_persica | Prupe.3G144800_v2.0.a1 |
| pyrus_communis | pycom17g24870 |
| rosa_chinensis | RchiOBHm_Chr3g0494101 RchiOBHm_Chr3g0495591 |
| rosa_laevigata | RLG00000022608 RLG00000022679 |
| rosa_multiflora | Rmu_sc0000559.1_g000025 Rmu_sc0010244.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00391280 |
| rosa_rugosa | Rorug03G0263900 Rorug03G0274400 |
| rosa_samantha | Rh3AG313900 Rh3AG322100 Rh3BG349700 Rh3BG357300 Rh3CG346500 Rh3DG349000 |
| rosa_wichuraiana | Rw3G027450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 465 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 555, 863 |
| Acc16I | TGCGCA | 1 cut(s) | 582 |
| AciI | CCGC | 6 cut(s) | 224, 227, 272, 278, 284, 863 |
| AclWI | GGATC | 2 cut(s) | 1099, 1202 |
| AcsI | RAATTY | 3 cut(s) | 536, 1040, 1080 |
| AfaI | GTAC | 4 cut(s) | 297, 364, 399, 971 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 657, 859, 1034 |
| AgsI | TTSAA | 7 cut(s) | 59, 64, 158, 379, 595, 905, 1075 |
| AhlI | ACTAGT | 1 cut(s) | 365 |
| AjnI | CCWGG | 3 cut(s) | 645, 858, 1033 |
| AluBI | AGCT | 3 cut(s) | 119, 391, 813 |
| AluI | AGCT | 3 cut(s) | 119, 391, 813 |
| Alw21I | GWGCWC | 1 cut(s) | 852 |
| Alw26I | GTCTC | 3 cut(s) | 362, 849, 880 |
| Alw44I | GTGCAC | 1 cut(s) | 848 |
| AlwI | GGATC | 2 cut(s) | 1099, 1202 |
| Ama87I | CYCGRG | 1 cut(s) | 835 |
| AoxI | GGCC | 4 cut(s) | 441, 506, 648, 1049 |
| ApaLI | GTGCAC | 1 cut(s) | 848 |
| ApeKI | GCWGC | 5 cut(s) | 5, 18, 21, 24, 604 |
| ApoI | RAATTY | 3 cut(s) | 536, 1040, 1080 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 524, 556 |
| AseI | ATTAAT | 2 cut(s) | 177, 639 |
| AspLEI | GCGC | 1 cut(s) | 583 |
| AspS9I | GGNCC | 4 cut(s) | 442, 506, 865, 1025 |
| AsuHPI | GGTGA | 2 cut(s) | 201, 234 |
| AvaI | CYCGRG | 1 cut(s) | 835 |
| AvaII | GGWCC | 2 cut(s) | 865, 1025 |
| BaeGI | GKGCMC | 1 cut(s) | 852 |
| BauI | CACGAG | 1 cut(s) | 551 |
| BbsI | GAAGAC | 1 cut(s) | 613 |
| Bbv12I | GWGCWC | 1 cut(s) | 852 |
| BbvI | GCAGC | 5 cut(s) | 17, 30, 33, 36, 616 |
| BccI | CCATC | 4 cut(s) | 223, 674, 905, 1041 |
| BceAI | ACGGC | 2 cut(s) | 635, 1126 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 29, 63 |
| BciT130I | CCWGG | 3 cut(s) | 647, 860, 1035 |
| BcoDI | GTCTC | 3 cut(s) | 362, 849, 880 |
| BcuI | ACTAGT | 1 cut(s) | 365 |
| BfaI | CTAG | 4 cut(s) | 116, 200, 366, 1213 |
| BisI | GCNGC | 6 cut(s) | 6, 19, 22, 25, 227, 605 |
| BlsI | GCNGC | 6 cut(s) | 7, 20, 23, 26, 228, 606 |
| BmcAI | AGTACT | 1 cut(s) | 364 |
| Bme1390I | CCNGG | 3 cut(s) | 647, 860, 1035 |
| Bme18I | GGWCC | 2 cut(s) | 865, 1025 |
| BmeT110I | CYCGRG | 1 cut(s) | 835 |
| BmgT120I | GGNCC | 4 cut(s) | 442, 506, 865, 1025 |
| BmiI | GGNNCC | 3 cut(s) | 444, 522, 1170 |
| BmrFI | CCNGG | 3 cut(s) | 647, 860, 1035 |
| BmrI | ACTGGG | 1 cut(s) | 667 |
| BmsI | GCATC | 3 cut(s) | 120, 170, 443 |
| BmuI | ACTGGG | 1 cut(s) | 667 |
| BpiI | GAAGAC | 1 cut(s) | 613 |
| BpmI | CTGGAG | 1 cut(s) | 1187 |
| BpuEI | CTTGAG | 1 cut(s) | 432 |
| Bsa29I | ATCGAT | 1 cut(s) | 933 |
| BsaI | GGTCTC | 1 cut(s) | 849 |
| BsaJI | CCNNGG | 4 cut(s) | 438, 625, 836, 1034 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 860, 890, 1160, 1190 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 657, 859, 1034 |
| Bse1I | ACTGG | 1 cut(s) | 662 |
| BseBI | CCWGG | 3 cut(s) | 647, 860, 1035 |
| BseCI | ATCGAT | 1 cut(s) | 933 |
| BseDI | CCNNGG | 4 cut(s) | 438, 625, 836, 1034 |
| BseGI | GGATG | 5 cut(s) | 111, 434, 685, 1030, 1052 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 657, 859, 1034 |
| BseMII | CTCAG | 1 cut(s) | 373 |
| BseNI | ACTGG | 1 cut(s) | 662 |
| BseRI | GAGGAG | 2 cut(s) | 431, 1006 |
| BseSI | GKGCMC | 1 cut(s) | 852 |
| BseXI | GCAGC | 5 cut(s) | 17, 30, 33, 36, 616 |
| BsgI | GTGCAG | 1 cut(s) | 37 |
| BshFI | GGCC | 4 cut(s) | 443, 508, 650, 1051 |
| BshVI | ATCGAT | 1 cut(s) | 933 |
| BsiHKAI | GWGCWC | 1 cut(s) | 852 |
| BsiHKCI | CYCGRG | 1 cut(s) | 835 |
| BslFI | GGGAC | 2 cut(s) | 545, 561 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 657, 859, 1034 |
| BsmAI | GTCTC | 3 cut(s) | 362, 849, 880 |
| BsmFI | GGGAC | 2 cut(s) | 545, 561 |
| BsmI | GAATGC | 1 cut(s) | 756 |
| BsnI | GGCC | 4 cut(s) | 443, 508, 650, 1051 |
| Bso31I | GGTCTC | 1 cut(s) | 849 |
| BsoBI | CYCGRG | 1 cut(s) | 835 |
| Bsp1286I | GDGCHC | 1 cut(s) | 852 |
| Bsp143I | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| Bsp19I | CCATGG | 2 cut(s) | 438, 625 |
| BspACI | CCGC | 6 cut(s) | 224, 227, 272, 278, 284, 863 |
| BspANI | GGCC | 4 cut(s) | 443, 508, 650, 1051 |
| BspCNI | CTCAG | 1 cut(s) | 372 |
| BspDI | ATCGAT | 1 cut(s) | 933 |
| BspLI | GGNNCC | 3 cut(s) | 444, 522, 1170 |
| BspPI | GGATC | 2 cut(s) | 1099, 1202 |
| BspTNI | GGTCTC | 1 cut(s) | 849 |
| BsrI | ACTGG | 1 cut(s) | 662 |
| BssECI | CCNNGG | 4 cut(s) | 438, 625, 836, 1034 |
| BssMI | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| BssSI | CACGAG | 1 cut(s) | 551 |
| BssT1I | CCWWGG | 2 cut(s) | 438, 625 |
| Bst2BI | CACGAG | 1 cut(s) | 551 |
| Bst2UI | CCWGG | 3 cut(s) | 647, 860, 1035 |
| Bst4CI | ACNGT | 5 cut(s) | 207, 300, 350, 470, 1194 |
| BstC8I | GCNNGC | 1 cut(s) | 579 |
| BstDEI | CTNAG | 2 cut(s) | 359, 818 |
| BstDSI | CCRYGG | 2 cut(s) | 438, 625 |
| BstF5I | GGATG | 5 cut(s) | 111, 434, 685, 1030, 1052 |
| BstHHI | GCGC | 1 cut(s) | 583 |
| BstKTI | GATC | 4 cut(s) | 883, 979, 1094, 1210 |
| BstMAI | GTCTC | 3 cut(s) | 362, 849, 880 |
| BstMBI | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 24, 440, 819 |
| BstNI | CCWGG | 3 cut(s) | 647, 860, 1035 |
| BstNSI | RCATGY | 2 cut(s) | 581, 967 |
| BstSCI | CCNGG | 3 cut(s) | 645, 858, 1033 |
| BstSLI | GKGCMC | 1 cut(s) | 852 |
| BstV1I | GCAGC | 5 cut(s) | 17, 30, 33, 36, 616 |
| BstV2I | GAAGAC | 1 cut(s) | 613 |
| Bsu15I | ATCGAT | 1 cut(s) | 933 |
| BsuRI | GGCC | 4 cut(s) | 443, 508, 650, 1051 |
| BsuTUI | ATCGAT | 1 cut(s) | 933 |
| BtgI | CCRYGG | 2 cut(s) | 438, 625 |
| BtsCI | GGATG | 5 cut(s) | 111, 434, 685, 1030, 1052 |
| BtsI | GCAGTG | 4 cut(s) | 34, 263, 707, 1103 |
| BtsIMutI | CAGTG | 5 cut(s) | 34, 263, 707, 1103, 1190 |
| Cac8I | GCNNGC | 1 cut(s) | 579 |
| CfoI | GCGC | 1 cut(s) | 583 |
| Cfr13I | GGNCC | 4 cut(s) | 442, 506, 865, 1025 |
| ClaI | ATCGAT | 1 cut(s) | 933 |
| Csp6I | GTAC | 4 cut(s) | 296, 363, 398, 970 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 905, 940 |
| CviAII | CATG | 7 cut(s) | 406, 439, 490, 578, 626, 964, 1002 |
| CviQI | GTAC | 4 cut(s) | 296, 363, 398, 970 |
| DdeI | CTNAG | 2 cut(s) | 359, 818 |
| DpnI | GATC | 4 cut(s) | 882, 978, 1093, 1209 |
| DpnII | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 555, 863 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 555, 863 |
| Eco130I | CCWWGG | 2 cut(s) | 438, 625 |
| Eco31I | GGTCTC | 1 cut(s) | 849 |
| Eco47I | GGWCC | 2 cut(s) | 865, 1025 |
| Eco88I | CYCGRG | 1 cut(s) | 835 |
| EcoO109I | RGGNCCY | 1 cut(s) | 506 |
| EcoRI | GAATTC | 1 cut(s) | 1080 |
| EcoRII | CCWGG | 3 cut(s) | 645, 858, 1033 |
| EcoT14I | CCWWGG | 2 cut(s) | 438, 625 |
| ErhI | CCWWGG | 2 cut(s) | 438, 625 |
| FaeI | CATG | 7 cut(s) | 409, 442, 493, 581, 629, 967, 1005 |
| FaqI | GGGAC | 2 cut(s) | 545, 561 |
| FatI | CATG | 7 cut(s) | 405, 438, 489, 577, 625, 963, 1001 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 19, 22, 25, 227, 605 |
| FokI | GGATG | 5 cut(s) | 98, 421, 692, 1017, 1059 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 19, 22, 25, 227, 605 |
| FspAI | RTGCGCAY | 1 cut(s) | 582 |
| FspBI | CTAG | 4 cut(s) | 116, 200, 366, 1213 |
| FspI | TGCGCA | 1 cut(s) | 582 |
| GlaI | GCGC | 1 cut(s) | 582 |
| GluI | GCNGC | 6 cut(s) | 6, 19, 22, 25, 227, 605 |
| GsuI | CTGGAG | 1 cut(s) | 1187 |
| HaeIII | GGCC | 4 cut(s) | 443, 508, 650, 1051 |
| HhaI | GCGC | 1 cut(s) | 583 |
| Hin1II | CATG | 7 cut(s) | 409, 442, 493, 581, 629, 967, 1005 |
| Hin6I | GCGC | 1 cut(s) | 581 |
| HinP1I | GCGC | 1 cut(s) | 581 |
| HincII | GTYRAC | 1 cut(s) | 961 |
| HindII | GTYRAC | 1 cut(s) | 961 |
| HindIII | AAGCTT | 1 cut(s) | 811 |
| HinfI | GANTC | 3 cut(s) | 455, 599, 749 |
| HphI | GGTGA | 2 cut(s) | 201, 234 |
| Hpy166II | GTNNAC | 6 cut(s) | 400, 655, 799, 850, 868, 961 |
| Hpy188I | TCNGA | 6 cut(s) | 477, 748, 880, 885, 988, 1091 |
| Hpy188III | TCNNGA | 4 cut(s) | 133, 496, 775, 1166 |
| Hpy8I | GTNNAC | 6 cut(s) | 400, 655, 799, 850, 868, 961 |
| Hpy99I | CGWCG | 3 cut(s) | 237, 416, 693 |
| HpyAV | CCTTC | 1 cut(s) | 597 |
| HpyCH4III | ACNGT | 5 cut(s) | 207, 300, 350, 470, 1194 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 9 cut(s) | 18, 32, 76, 320, 577, 707, 756, 850, 1101 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 24, 440, 819 |
| HpyF3I | CTNAG | 2 cut(s) | 359, 818 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| Hsp92II | CATG | 7 cut(s) | 409, 442, 493, 581, 629, 967, 1005 |
| HspAI | GCGC | 1 cut(s) | 581 |
| Kzo9I | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| LmnI | GCTCC | 4 cut(s) | 526, 993, 1168, 1192 |
| Lsp1109I | GCAGC | 5 cut(s) | 17, 30, 33, 36, 616 |
| LweI | GCATC | 3 cut(s) | 120, 170, 443 |
| MaeI | CTAG | 4 cut(s) | 116, 200, 366, 1213 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 5 cut(s) | 102, 137, 207, 420, 1176 |
| MalI | GATC | 4 cut(s) | 882, 978, 1093, 1209 |
| MboI | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| MboII | GAAGA | 2 cut(s) | 613, 645 |
| MhlI | GDGCHC | 1 cut(s) | 852 |
| MluCI | AATT | 8 cut(s) | 59, 64, 181, 343, 536, 636, 1040, 1080 |
| MmeI | TCCRAC | 2 cut(s) | 657, 974 |
| MseI | TTAA | 4 cut(s) | 177, 189, 639, 768 |
| MspR9I | CCNGG | 3 cut(s) | 647, 860, 1035 |
| Mva1269I | GAATGC | 1 cut(s) | 756 |
| MvaI | CCWGG | 3 cut(s) | 647, 860, 1035 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 24, 440, 819 |
| NcoI | CCATGG | 2 cut(s) | 438, 625 |
| NdeII | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| NlaIII | CATG | 7 cut(s) | 409, 442, 493, 581, 629, 967, 1005 |
| NlaIV | GGNNCC | 3 cut(s) | 444, 522, 1170 |
| NmeAIII | GCCGAG | 1 cut(s) | 87 |
| NmuCI | GTSAC | 2 cut(s) | 102, 207 |
| NsbI | TGCGCA | 1 cut(s) | 582 |
| NspI | RCATGY | 2 cut(s) | 581, 967 |
| PaeI | GCATGC | 1 cut(s) | 581 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 549 |
| PctI | GAATGC | 1 cut(s) | 756 |
| PfeI | GAWTC | 3 cut(s) | 455, 599, 749 |
| PkrI | GCNGC | 6 cut(s) | 7, 20, 23, 26, 228, 606 |
| PshBI | ATTAAT | 2 cut(s) | 177, 639 |
| PsiI | TTATAA | 1 cut(s) | 465 |
| Psp6I | CCWGG | 3 cut(s) | 645, 858, 1033 |
| PspGI | CCWGG | 3 cut(s) | 645, 858, 1033 |
| PspN4I | GGNNCC | 3 cut(s) | 444, 522, 1170 |
| PspPI | GGNCC | 4 cut(s) | 442, 506, 865, 1025 |
| RsaI | GTAC | 4 cut(s) | 297, 364, 399, 971 |
| RsaNI | GTAC | 4 cut(s) | 296, 363, 398, 970 |
| SaqAI | TTAA | 4 cut(s) | 177, 189, 639, 768 |
| SatI | GCNGC | 6 cut(s) | 6, 19, 22, 25, 227, 605 |
| Sau3AI | GATC | 4 cut(s) | 880, 976, 1091, 1207 |
| Sau96I | GGNCC | 4 cut(s) | 442, 506, 865, 1025 |
| ScaI | AGTACT | 1 cut(s) | 364 |
| ScrFI | CCNGG | 3 cut(s) | 647, 860, 1035 |
| SduI | GDGCHC | 1 cut(s) | 852 |
| SfaNI | GCATC | 3 cut(s) | 120, 170, 443 |
| SinI | GGWCC | 2 cut(s) | 865, 1025 |
| SmlI | CTYRAG | 1 cut(s) | 447 |
| SmoI | CTYRAG | 1 cut(s) | 447 |
| SpeI | ACTAGT | 1 cut(s) | 365 |
| SphI | GCATGC | 1 cut(s) | 581 |
| Sse9I | AATT | 8 cut(s) | 59, 64, 181, 343, 536, 636, 1040, 1080 |
| SsiI | CCGC | 6 cut(s) | 224, 227, 272, 278, 284, 863 |
| SspI | AATATT | 1 cut(s) | 12 |
| SspMI | CTAG | 4 cut(s) | 116, 200, 366, 1213 |
| StyD4I | CCNGG | 3 cut(s) | 645, 858, 1033 |
| StyI | CCWWGG | 2 cut(s) | 438, 625 |
| TaaI | ACNGT | 5 cut(s) | 207, 300, 350, 470, 1194 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 5 cut(s) | 232, 543, 631, 828, 933 |
| TasI | AATT | 8 cut(s) | 59, 64, 181, 343, 536, 636, 1040, 1080 |
| TatI | WGTACW | 2 cut(s) | 362, 397 |
| TauI | GCSGC | 1 cut(s) | 229 |
| TfiI | GAWTC | 3 cut(s) | 455, 599, 749 |
| Tru1I | TTAA | 4 cut(s) | 177, 189, 639, 768 |
| Tru9I | TTAA | 4 cut(s) | 177, 189, 639, 768 |
| TscAI | CASTG | 5 cut(s) | 34, 270, 714, 1103, 1197 |
| TseFI | GTSAC | 2 cut(s) | 102, 207 |
| TseI | GCWGC | 5 cut(s) | 5, 18, 21, 24, 604 |
| Tsp45I | GTSAC | 2 cut(s) | 102, 207 |
| TspDTI | ATGAA | 3 cut(s) | 478, 612, 1113 |
| TspGWI | ACGGA | 1 cut(s) | 250 |
| TspRI | CASTG | 5 cut(s) | 34, 270, 714, 1103, 1197 |
| VneI | GTGCAC | 1 cut(s) | 848 |
| VpaK11BI | GGWCC | 2 cut(s) | 865, 1025 |
| VspI | ATTAAT | 2 cut(s) | 177, 639 |
| XapI | RAATTY | 3 cut(s) | 536, 1040, 1080 |
| XceI | RCATGY | 2 cut(s) | 581, 967 |
| XspI | CTAG | 4 cut(s) | 116, 200, 366, 1213 |
| ZrmI | AGTACT | 1 cut(s) | 364 |