RLG00000025393

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0008144
Physical Location & Seq
Reverse (-)
45534822 .. 45535961
1140 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025393

Sequence Viewer

Length: 1041 bp
ATGGCACAACCCCCAGCCACGTCCAACGATGAAGTTGATCCCTCAACATTTTTGAAAACATTTGAGCAATGGATGGCACAGTTCGGACGCACTTACGGTGATAATGCAGAGAAAGAAAGGCGTCTCACCATATTCGTGAAGAACTTGTTATTTGTAAATAACTTCAACAGCCAAGGGAATAAGACTTACAAGTTAAGCGTCAACTTGTTTTCTGATATGAGCAATGAAGAATTTCTCGGACTTTACACTGGATTTCAAGCTCCCAATGTCACCTTAAACTCAAGCTCATTCCGTGGACAACGTAATATCAAATCTTTTAGGTACCAAGACCTATTTGAAACTGATGTTCCCACTAGAATTGACTGGAGGGAACAAGGTGCCGTTACCCCCGTCAAGGAACAAGGACAATGCCGTTCTTGTTGGGCATTTTCAGCAGTGGCAACAATTGAGGGCATTACCAAAATCAAAGGTAACCAATTGATTTCACTGTCCGAGCAACAACTTGTGGACTGTAACAGAGATCAAATTAACAAGGGCTGCGGTGGTGGTAATATGGAAGATGCCTTTAAATACATAAATGACAATGGAGGAATCACTAGTGAAGAAAACTACCAATACAAGGGTGCAGAAGAGACATGTGACACTACTAAGACGACTGAATATGCTGCCAAGATAAACGGTTATGAAATGGTTCCTCCCAATAGCGAAAATGATCTACTAAAGGCTGTGGCCAAGCAACCAGTCTCAGTTGCCCTTGATGCAGATGGAGATGAATTTAGGGCATACGCAAGTGGGGTATTTTCTGGTAATTGCGGGACAAACCTAACCCATGCTGTTACAATCGTTGGGTACGGAACGACTGAAGAAGGCACCAACTATTGGTTAGTGAAGAATTCATGGGGTGAAACCTGGGGTGAAAAGGGCTACATGAGAATTCTTCGAAATGCTGGTCCTCCAGGAGGTTTGTGTGGCATTGCTATGTACCCTTCTTATCCAACTGCATCAGCTATGGCACCCGCACCCGCTCCCTCATCACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04145 ko04210 ko04612 ko04621 ko04924 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map04621 map04924 map05205 map05323 map05418
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

347

Amino Acids

38.12

Weight (kDa)

4.92

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 21 - 78 7.4e-19 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 116 - 333 2.1e-80 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 321
AccB1I GGYRCC 4 cut(s) 321, 377, 869, 1012
AccB7I CCANNNNNTGG 1 cut(s) 879
AccBSI CCGCTC 1 cut(s) 1025
AciI CCGC 4 cut(s) 540, 813, 1017, 1023
AclWI GGATC 1 cut(s) 32
AcoI YGGCCR 1 cut(s) 729
AcsI RAATTY 4 cut(s) 230, 773, 892, 933
AcuI CTGAAG 1 cut(s) 882
AcyI GRCGYC 1 cut(s) 121
AfaI GTAC 3 cut(s) 323, 851, 983
AfiI CCNNNNNNNGG 4 cut(s) 394, 619, 879, 959
AflIII ACRYGT 1 cut(s) 635
AgsI TTSAA 4 cut(s) 55, 166, 257, 338
AhlI ACTAGT 1 cut(s) 596
AjiI CACGTC 1 cut(s) 21
AjnI CCWGG 2 cut(s) 908, 955
AluBI AGCT 3 cut(s) 260, 285, 1007
AluI AGCT 3 cut(s) 260, 285, 1007
Alw26I GTCTC 3 cut(s) 128, 626, 748
AlwI GGATC 1 cut(s) 32
AoxI GGCC 1 cut(s) 729
ApeKI GCWGC 2 cut(s) 537, 665
ApoI RAATTY 4 cut(s) 230, 773, 892, 933
ArsI GACNNNNNNTTYG 2 cut(s) 934, 966
Asp700I GAANNNNTTC 2 cut(s) 231, 690
Asp718I GGTACC 1 cut(s) 321
AspS9I GGNCC 1 cut(s) 950
AsuHPI GGTGA 5 cut(s) 110, 118, 262, 914, 926
AsuII TTCGAA 1 cut(s) 940
AvaII GGWCC 1 cut(s) 950
BalI TGGCCA 1 cut(s) 731
BanI GGYRCC 4 cut(s) 321, 377, 869, 1012
BbvI GCAGC 2 cut(s) 524, 652
BccI CCATC 2 cut(s) 67, 758
BceAI ACGGC 2 cut(s) 365, 396
BciT130I CCWGG 2 cut(s) 910, 957
BcoDI GTCTC 3 cut(s) 128, 626, 748
BcuI ACTAGT 1 cut(s) 596
BfaI CTAG 2 cut(s) 354, 597
BfmI CTRYAG 1 cut(s) 1037
BisI GCNGC 2 cut(s) 538, 666
BlsI GCNGC 2 cut(s) 539, 667
Bme1390I CCNGG 2 cut(s) 910, 957
Bme18I GGWCC 1 cut(s) 950
BmgBI CACGTC 1 cut(s) 21
BmgT120I GGNCC 1 cut(s) 950
BmiI GGNNCC 5 cut(s) 323, 379, 693, 871, 1014
BmrFI CCNGG 2 cut(s) 910, 957
BmsI GCATC 3 cut(s) 550, 748, 1010
BpmI CTGGAG 2 cut(s) 385, 939
Bpu14I TTCGAA 1 cut(s) 940
BpuEI CTTGAG 1 cut(s) 265
BsaHI GRCGYC 1 cut(s) 121
BsaJI CCNNGG 3 cut(s) 172, 292, 909
Bsc4I CCNNNNNNNGG 4 cut(s) 394, 619, 879, 959
Bse1I ACTGG 3 cut(s) 253, 368, 740
Bse3DI GCAATG 3 cut(s) 74, 229, 972
BseBI CCWGG 2 cut(s) 910, 957
BseDI CCNNGG 3 cut(s) 172, 292, 909
BseGI GGATG 1 cut(s) 78
BseLI CCNNNNNNNGG 4 cut(s) 394, 619, 879, 959
BseMI GCAATG 3 cut(s) 74, 229, 972
BseMII CTCAG 1 cut(s) 759
BseNI ACTGG 3 cut(s) 253, 368, 740
BseXI GCAGC 2 cut(s) 524, 652
BseYI CCCAGC 1 cut(s) 13
BsgI GTGCAG 1 cut(s) 645
BshFI GGCC 1 cut(s) 731
BshNI GGYRCC 4 cut(s) 321, 377, 869, 1012
BslFI GGGAC 1 cut(s) 829
BslI CCNNNNNNNGG 4 cut(s) 394, 619, 879, 959
BsmAI GTCTC 3 cut(s) 128, 626, 748
BsmBI CGTCTC 1 cut(s) 128
BsmFI GGGAC 1 cut(s) 829
BsnI GGCC 1 cut(s) 731
Bsp119I TTCGAA 1 cut(s) 940
Bsp143I GATC 3 cut(s) 37, 520, 712
BspACI CCGC 4 cut(s) 540, 813, 1017, 1023
BspANI GGCC 1 cut(s) 731
BspCNI CTCAG 1 cut(s) 758
BspLI GGNNCC 5 cut(s) 323, 379, 693, 871, 1014
BspPI GGATC 1 cut(s) 32
BspT104I TTCGAA 1 cut(s) 940
BspT107I GGYRCC 4 cut(s) 321, 377, 869, 1012
BsrBI CCGCTC 1 cut(s) 1025
BsrDI GCAATG 3 cut(s) 74, 229, 972
BsrI ACTGG 3 cut(s) 253, 368, 740
BssECI CCNNGG 3 cut(s) 172, 292, 909
BssMI GATC 3 cut(s) 37, 520, 712
BssNI GRCGYC 1 cut(s) 121
BssT1I CCWWGG 1 cut(s) 172
Bst2UI CCWGG 2 cut(s) 910, 957
Bst4CI ACNGT 6 cut(s) 81, 98, 489, 512, 680, 1038
Bst6I CTCTTC 1 cut(s) 624
BstACI GRCGYC 1 cut(s) 121
BstBI TTCGAA 1 cut(s) 940
BstDEI CTNAG 2 cut(s) 648, 745
BstDSI CCRYGG 1 cut(s) 292
BstEII GGTNACC 1 cut(s) 470
BstENI CCTNNNNNAGG 1 cut(s) 957
BstF5I GGATG 1 cut(s) 78
BstKTI GATC 3 cut(s) 40, 523, 715
BstMAI GTCTC 3 cut(s) 128, 626, 748
BstMBI GATC 3 cut(s) 37, 520, 712
BstMWI GCNNNNNNNGC 2 cut(s) 431, 758
BstNI CCWGG 2 cut(s) 910, 957
BstNSI RCATGY 1 cut(s) 639
BstPI GGTNACC 1 cut(s) 470
BstSCI CCNGG 2 cut(s) 908, 955
BstSFI CTRYAG 1 cut(s) 1037
BstV1I GCAGC 2 cut(s) 524, 652
BsuRI GGCC 1 cut(s) 731
BtgI CCRYGG 1 cut(s) 292
BtrI CACGTC 1 cut(s) 21
BtsCI GGATG 1 cut(s) 78
BtsI GCAGTG 1 cut(s) 441
BtsIMutI CAGTG 4 cut(s) 246, 441, 485, 1034
Cfr13I GGNCC 1 cut(s) 950
CseI GACGC 3 cut(s) 96, 110, 187
Csp6I GTAC 3 cut(s) 322, 850, 982
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviAII CATG 4 cut(s) 636, 830, 897, 928
CviJI RGCY 9 cut(s) 17, 171, 260, 285, 537, 725, 731, 924, 1007
CviKI_1 RGCY 9 cut(s) 17, 171, 260, 285, 537, 725, 731, 924, 1007
CviQI GTAC 3 cut(s) 322, 850, 982
DdeI CTNAG 2 cut(s) 648, 745
DpnI GATC 3 cut(s) 39, 522, 714
DpnII GATC 3 cut(s) 37, 520, 712
DraI TTTAAA 1 cut(s) 568
EaeI YGGCCR 1 cut(s) 729
Eam1104I CTCTTC 1 cut(s) 624
EarI CTCTTC 1 cut(s) 624
Eco130I CCWWGG 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 950
Eco57I CTGAAG 1 cut(s) 882
Eco91I GGTNACC 1 cut(s) 470
EcoNI CCTNNNNNAGG 1 cut(s) 957
EcoO65I GGTNACC 1 cut(s) 470
EcoRI GAATTC 2 cut(s) 892, 933
EcoRII CCWGG 2 cut(s) 908, 955
EcoT14I CCWWGG 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 172
Esp3I CGTCTC 1 cut(s) 128
FaeI CATG 4 cut(s) 639, 833, 900, 931
FaqI GGGAC 1 cut(s) 829
FatI CATG 4 cut(s) 635, 829, 896, 927
FauI CCCGC 3 cut(s) 806, 1024, 1030
Fnu4HI GCNGC 2 cut(s) 538, 666
FokI GGATG 1 cut(s) 85
Fsp4HI GCNGC 2 cut(s) 538, 666
FspBI CTAG 2 cut(s) 354, 597
GluI GCNGC 2 cut(s) 538, 666
GsaI CCCAGC 1 cut(s) 17
GsuI CTGGAG 2 cut(s) 385, 939
HaeIII GGCC 1 cut(s) 731
HgaI GACGC 3 cut(s) 96, 110, 187
Hin1I GRCGYC 1 cut(s) 121
Hin1II CATG 4 cut(s) 639, 833, 900, 931
HincII GTYRAC 1 cut(s) 202
HindII GTYRAC 1 cut(s) 202
HinfI GANTC 1 cut(s) 591
HphI GGTGA 5 cut(s) 110, 118, 262, 914, 926
Hpy166II GTNNAC 3 cut(s) 202, 296, 508
Hpy188I TCNGA 4 cut(s) 86, 214, 239, 493
Hpy188III TCNNGA 1 cut(s) 136
Hpy8I GTNNAC 3 cut(s) 202, 296, 508
HpyAV CCTTC 2 cut(s) 860, 996
HpyCH4III ACNGT 6 cut(s) 81, 98, 489, 512, 680, 1038
HpyCH4IV ACGT 2 cut(s) 20, 301
HpyCH4V TGCA 4 cut(s) 107, 626, 761, 1001
HpyF10VI GCNNNNNNNGC 2 cut(s) 431, 758
HpyF3I CTNAG 2 cut(s) 648, 745
HpySE526I ACGT 2 cut(s) 20, 301
Hsp92I GRCGYC 1 cut(s) 121
Hsp92II CATG 4 cut(s) 639, 833, 900, 931
KpnI GGTACC 1 cut(s) 325
Kzo9I GATC 3 cut(s) 37, 520, 712
LmnI GCTCC 2 cut(s) 265, 1030
Lsp1109I GCAGC 2 cut(s) 524, 652
LweI GCATC 3 cut(s) 550, 748, 1010
MaeI CTAG 2 cut(s) 354, 597
MaeII ACGT 2 cut(s) 20, 301
MaeIII GTNAC 6 cut(s) 268, 382, 470, 512, 638, 835
MalI GATC 3 cut(s) 39, 522, 714
MbiI CCGCTC 1 cut(s) 1025
MboI GATC 3 cut(s) 37, 520, 712
MboII GAAGA 8 cut(s) 151, 239, 569, 614, 641, 875, 901, 929
MfeI CAATTG 2 cut(s) 444, 476
MlsI TGGCCA 1 cut(s) 731
MluCI AATT 9 cut(s) 230, 357, 444, 476, 525, 773, 808, 892, 933
MluNI TGGCCA 1 cut(s) 731
MmeI TCCRAC 2 cut(s) 48, 1019
MnlI CCTC 8 cut(s) 52, 360, 442, 581, 705, 953, 963, 1039
Mox20I TGGCCA 1 cut(s) 731
MroXI GAANNNNTTC 2 cut(s) 231, 690
MscI TGGCCA 1 cut(s) 731
MseI TTAA 4 cut(s) 194, 275, 528, 567
MslI CAYNNNNRTG 2 cut(s) 134, 977
Msp20I TGGCCA 1 cut(s) 731
MspR9I CCNGG 2 cut(s) 910, 957
MunI CAATTG 2 cut(s) 444, 476
MvaI CCWGG 2 cut(s) 910, 957
MwoI GCNNNNNNNGC 2 cut(s) 431, 758
NdeII GATC 3 cut(s) 37, 520, 712
NlaIII CATG 4 cut(s) 639, 833, 900, 931
NlaIV GGNNCC 5 cut(s) 323, 379, 693, 871, 1014
NmuCI GTSAC 2 cut(s) 268, 638
NspI RCATGY 1 cut(s) 639
NspV TTCGAA 1 cut(s) 940
PciI ACATGT 1 cut(s) 635
PdmI GAANNNNTTC 2 cut(s) 231, 690
PfeI GAWTC 1 cut(s) 591
PflMI CCANNNNNTGG 1 cut(s) 879
PfoI TCCNGGA 1 cut(s) 955
PkrI GCNGC 2 cut(s) 539, 667
PscI ACATGT 1 cut(s) 635
Psp6I CCWGG 2 cut(s) 908, 955
PspEI GGTNACC 1 cut(s) 470
PspFI CCCAGC 1 cut(s) 13
PspGI CCWGG 2 cut(s) 908, 955
PspN4I GGNNCC 5 cut(s) 323, 379, 693, 871, 1014
PspPI GGNCC 1 cut(s) 950
RsaI GTAC 3 cut(s) 323, 851, 983
RsaNI GTAC 3 cut(s) 322, 850, 982
RseI CAYNNNNRTG 2 cut(s) 134, 977
SaqAI TTAA 4 cut(s) 194, 275, 528, 567
SatI GCNGC 2 cut(s) 538, 666
Sau3AI GATC 3 cut(s) 37, 520, 712
Sau96I GGNCC 1 cut(s) 950
ScrFI CCNGG 2 cut(s) 910, 957
SfaNI GCATC 3 cut(s) 550, 748, 1010
SfcI CTRYAG 1 cut(s) 1037
SfuI TTCGAA 1 cut(s) 940
SinI GGWCC 1 cut(s) 950
SmiMI CAYNNNNRTG 2 cut(s) 134, 977
SmlI CTYRAG 1 cut(s) 280
SmoI CTYRAG 1 cut(s) 280
SpeI ACTAGT 1 cut(s) 596
Sse9I AATT 9 cut(s) 230, 357, 444, 476, 525, 773, 808, 892, 933
SsiI CCGC 4 cut(s) 540, 813, 1017, 1023
SspMI CTAG 2 cut(s) 354, 597
StyD4I CCNGG 2 cut(s) 908, 955
StyI CCWWGG 1 cut(s) 172
TaaI ACNGT 6 cut(s) 81, 98, 489, 512, 680, 1038
TaiI ACGT 2 cut(s) 23, 304
TaqI TCGA 1 cut(s) 940
TasI AATT 9 cut(s) 230, 357, 444, 476, 525, 773, 808, 892, 933
TfiI GAWTC 1 cut(s) 591
Tru1I TTAA 4 cut(s) 194, 275, 528, 567
Tru9I TTAA 4 cut(s) 194, 275, 528, 567
TscAI CASTG 4 cut(s) 253, 441, 492, 1041
TseFI GTSAC 2 cut(s) 268, 638
TseI GCWGC 2 cut(s) 537, 665
Tsp45I GTSAC 2 cut(s) 268, 638
TspDTI ATGAA 5 cut(s) 45, 240, 699, 786, 885
TspGWI ACGGA 2 cut(s) 281, 867
TspRI CASTG 4 cut(s) 253, 441, 492, 1041
Van91I CCANNNNNTGG 1 cut(s) 879
VpaK11BI GGWCC 1 cut(s) 950
XagI CCTNNNNNAGG 1 cut(s) 957
XapI RAATTY 4 cut(s) 230, 773, 892, 933
XceI RCATGY 1 cut(s) 639
XmnI GAANNNNTTC 2 cut(s) 231, 690
XspI CTAG 2 cut(s) 354, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.