RLG00000029713

Transcription initiation factor TFIID subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0004130
Physical Location & Seq
Reverse (-)
43931040 .. 43947369
16330 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029713

Sequence Viewer

Length: 2538 bp
ATGGAGGTAATGTCTCCTGGATCCAAGAATCTTCAAAATTACATGATTAGCAGTCTCCTAGTCTACATTTGTCGTGAGTTCCGTGCTGCCGAAAAGCGCCATTTTCTTCCTTGTATCCGTGCAAAAGAGTTACCTTCACAATTTCCTTACCTAACTGATACCTTTATTAAAAAGAAGCTGAAGGAACTTGCGAATTTGCAGGTATGTGCCTATGAAAGCATGCAAGCTGGTCTTTATAGGCTCAAGCATTTAGGAATTACTGAAACACATCCTTCAGCCATATCATCTGCAATGAGTCGTCTCCCTGATGAAGCAATTACTCTGGCTGCTGCATCCTACATTGAAAGGGAACTACAGATTACTCCATGGAACTTGAGTAGCAATTTTGTAGCCTGTACACTGGGAAAAGAAACTATTGAGCGTTTGGAAATACCTGGTGTGGGTGATCCATCTGGTAGGGGCCTAGGGTTTAGTTATGTTCGTGCTACTCCGAAAGCATCAATGTCAAGCGCTGTTGTGAAGAAAAAATCTGCTGCTGGTCGAGGAGGTTCCACTGTTACCGGAACAGATTCTGATTTACGCAGATTAAGCATGGAAGCTGCACGACAGGTTCTTAAATTTGGCTTTTCTGATGAACTGATTGTGAGGCAGACTAGATGGCATCGGATTGCAATGATACGTAAGCTATCAAGTGAGCAAGCTGCATCTGTGGTCAAAGTCGATGCAAATACTATCAGCAAATATGCACGTGGACAGCGTATGTCCTTTCTTCAGCTGCAGCAGCAGAACCGTGAGAAGTGTCAGGAAATTTGGGAACGACAAGTTCAGAGTCTTTCAGCTGTAGATGAAGAATGTGAAGAAGGGCTAGGGGGTAAACATGAATCCAGCTATGATAAGGCAGATGGTGTTAAAGGGCTTAAAATGAGAAGGCGCCCCTCCTTGGCTAAGGCAGAAGAGGAAAATGAAGATGAAGCAGCTGAATTATGCAGGTTGCTTATGGATGGACAACCTGATGGTTCCTATACTTCAAAAGAGAATCCAATTGGAGACGCGAAAGTGATGGAAAATCTTCTTAAAAGAAACAAGACTGGAAAACTCAAAGGAATAAAACAGAATGATGTTGCGCCTTTGGGTCTAACGTACAAAAAACTGAAAATAACAGGAGATGGGGTGTTTAATGAGATGAAATCAGCAAGAGACAGTTTTGTCTGTGGAGCATGTGGTCAGCTTGGACACATGAGGACAAACAAGAACTGCCCCAAGTATGGAGAAGATCACGAAACACACCTGGAAGCTCCAGATCTGGAGAAAGCATCTGGGAAGTCCACTACCCTGAATTCATCTAATTATGCAGCTAAAATTGCCAGGGTTGAAGCTTCTGAAGTTGAAAACCCAAAGGTTCTCCCAGCGATATTCAAATATGGGTCAACAGAAAAGGTTCCTATAAACAAGCTCCTGGAGAGACTGAGAGTTAATAAAATAATAATTTCCAAGGGCAAAAAACCTGAAAATGTACCAGTTGAACCACATAAACCCCCTATTGTTATACGGCCTCCGACCGATATAGTTAGGAGTCATGTTGAACTACAGAAGCCAACCATTATTATACGACCACCAGCAAATACAGACAGAGATCTGGTGGAATCTCAAAAGCCCTCTACTGGTAAACAGTCATCAGTGGAAGCACATAAAGAGCAACAGCATAAGAAAATCATAATTAAGCGTCCCAAAGAACACAGGAAAACTAAAAGAATTGTTGAATTGACAAGTTCTGGAAAGCACAGGAAGCAGGATAACACAAATTTTGCAAAGGAAGCAGCAAAAAAGAAAGCTAGAGATGATAGGAGATTATGGGAGGAGCAGGAACAACGAAGAAATGACGAGAGATTGAGAGAAGAGAGGGTCAGAAGGCTTTATGAAGAGGAAATGAGGATGATAGAGGAGAAAGAAAGAGTAATGGAGCTCAGGGAGGAAGAAGAACGTCAGAAAGCAAGGAACAAGAAGACGAAGAAATGGCCTGCGATAAGAGAGGACTATTTAGAGGACTCACAGACAAGAAGGTTTGATAATAGAATGCCAGAGAGAGATCGAGGCACCAAAAGGAGGCCAGTTGTTAAGTTAGTAAGGTATGGTGGAGAATCTGCCCTAAGTACAAAGCGTCGTAGACGAGGAGAGGTTGGTTTGGCAAACATCTTGGAGCATATTGTAGAAACCCTCAAAGATCGAATTGAAGTTTCGTATCTTTTTCTTAAACCTGTGTCCAAAAAGGAAGCTCCAGATTACCTGAACTTCGTAGAGCGCCCCATGGATCTATCAACAATTCGGGAGAAGGTAAGGAAAATGGAGTACAAGAGCCGGAAGCAATTCAGCCATGACGTTGCTCAGATCACCATCAATGCCCACTTATATAATGACGGTCGTAATCCAGGTATCCCTCCCCTTGCAGATCAACTTTTAGAGATCTGTGACCACATGCTGATTGAGAATGATGAAAGCTTGACTCAAGCTGAAGCAGGCATTGAATCTGTAGATAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0000988 GO:0000989 GO:0001076 GO:0001129 GO:0001132 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008080 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016740 GO:0016746 GO:0016747 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034212 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043565 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0061733 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
Bromodomain DUF3591 TBP-binding ubiquitin zf-CCHC_6

Protein Analysis

846

Amino Acids

96.37

Weight (kDa)

9.43

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3591 PF12157 67 - 224 1e-20 Protein of unknown function (DUF3591)
Bromodomain PF00439 733 - 807 1.1e-18 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1205
Acc36I ACCTGC 2 cut(s) 190, 978
AccB1I GGYRCC 2 cut(s) 930, 2093
AccI GTMKAC 2 cut(s) 63, 2164
AccII CGCG 1 cut(s) 1052
AclWI GGATC 4 cut(s) 15, 28, 440, 2316
AcsI RAATTY 5 cut(s) 193, 617, 807, 1336, 1801
AcuI CTGAAG 5 cut(s) 200, 258, 755, 1401, 2529
AcvI CACGTG 1 cut(s) 749
AcyI GRCGYC 1 cut(s) 931
AfaI GTAC 5 cut(s) 397, 1142, 1515, 2152, 2348
AfeI AGCGCT 1 cut(s) 511
AfiI CCNNNNNNNGG 5 cut(s) 440, 940, 1265, 1661, 2103
AjnI CCWGG 6 cut(s) 16, 433, 1287, 1364, 1455, 2425
Alw21I GWGCWC 1 cut(s) 1965
Alw26I GTCTC 6 cut(s) 18, 59, 305, 1041, 1191, 1456
AlwI GGATC 4 cut(s) 15, 28, 440, 2316
AlwNI CAGNNNCTG 1 cut(s) 572
Aor51HI AGCGCT 1 cut(s) 511
AoxI GGCC 4 cut(s) 460, 1550, 2015, 2105
ApoI RAATTY 5 cut(s) 193, 617, 807, 1336, 1801
Asp700I GAANNNNTTC 4 cut(s) 568, 1068, 1437, 2363
AspA2I CCTAGG 1 cut(s) 463
AspLEI GCGC 5 cut(s) 99, 512, 933, 1126, 2301
AspS9I GGNCC 1 cut(s) 460
AsuHPI GGTGA 2 cut(s) 455, 2380
AvrII CCTAGG 1 cut(s) 463
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 2 cut(s) 930, 2093
BanII GRGCYC 1 cut(s) 1965
BbrPI CACGTG 1 cut(s) 749
BbsI GAAGAC 1 cut(s) 2009
Bbv12I GWGCWC 1 cut(s) 1965
BccI CCATC 8 cut(s) 457, 651, 896, 995, 1007, 1054, 1160, 2399
BceAI ACGGC 1 cut(s) 1565
BciT130I CCWGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
BciVI GTATCC 2 cut(s) 125, 2441
BcoDI GTCTC 6 cut(s) 18, 59, 305, 1041, 1191, 1456
BfaI CTAG 5 cut(s) 59, 464, 654, 866, 1833
BfmI CTRYAG 5 cut(s) 353, 776, 840, 1586, 2526
BfoI RGCGCY 4 cut(s) 100, 513, 934, 2302
BfuAI ACCTGC 2 cut(s) 190, 978
BfuI GTATCC 2 cut(s) 125, 2441
BglII AGATCT 3 cut(s) 1300, 1633, 2460
BlnI CCTAGG 1 cut(s) 463
Bme1390I CCNGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
BmgT120I GGNCC 1 cut(s) 460
BmiI GGNNCC 7 cut(s) 22, 461, 550, 932, 1018, 1440, 2095
BmrFI CCNGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
BmrI ACTGGG 1 cut(s) 410
BmsI GCATC 6 cut(s) 341, 506, 670, 712, 713, 1322
BmuI ACTGGG 1 cut(s) 410
BpiI GAAGAC 1 cut(s) 2009
BpmI CTGGAG 4 cut(s) 1281, 1325, 1478, 2259
Bpu10I CCTNAGC 2 cut(s) 945, 1964
BpuEI CTTGAG 3 cut(s) 227, 394, 2487
BsaAI YACGTR 2 cut(s) 680, 749
BsaBI GATNNNNATC 1 cut(s) 2390
BsaHI GRCGYC 1 cut(s) 931
BsaJI CCNNGG 6 cut(s) 365, 463, 939, 1365, 1491, 2304
BsaWI WCCGGW 1 cut(s) 560
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1155, 1185
Bsc4I CCNNNNNNNGG 5 cut(s) 440, 940, 1265, 1661, 2103
Bse1I ACTGG 5 cut(s) 405, 1093, 1517, 1666, 2108
Bse3DI GCAATG 2 cut(s) 297, 678
Bse8I GATNNNNATC 1 cut(s) 2390
BseBI CCWGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
BseDI CCNNGG 6 cut(s) 365, 463, 939, 1365, 1491, 2304
BseGI GGATG 4 cut(s) 268, 332, 1006, 1938
BseJI GATNNNNATC 1 cut(s) 2390
BseLI CCNNNNNNNGG 5 cut(s) 440, 940, 1265, 1661, 2103
BseMI GCAATG 2 cut(s) 297, 678
BseMII CTCAG 3 cut(s) 1457, 1978, 2396
BseNI ACTGG 5 cut(s) 405, 1093, 1517, 1666, 2108
BseRI GAGGAG 4 cut(s) 558, 1871, 1955, 2184
BseYI CCCAGC 1 cut(s) 1405
BsgI GTGCAG 1 cut(s) 585
Bsh1236I CGCG 1 cut(s) 1052
Bsh1285I CGRYCG 2 cut(s) 1560, 2419
BshFI GGCC 4 cut(s) 462, 1552, 2017, 2107
BshNI GGYRCC 2 cut(s) 930, 2093
BsiEI CGRYCG 2 cut(s) 1560, 2419
BsiHKAI GWGCWC 1 cut(s) 1965
BsiSI CCGG 2 cut(s) 561, 2356
BslFI GGGAC 1 cut(s) 1710
BslI CCNNNNNNNGG 5 cut(s) 440, 940, 1265, 1661, 2103
BsmAI GTCTC 6 cut(s) 18, 59, 305, 1041, 1191, 1456
BsmBI CGTCTC 2 cut(s) 305, 1041
BsmFI GGGAC 1 cut(s) 1710
BsmI GAATGC 1 cut(s) 2079
BsnI GGCC 4 cut(s) 462, 1552, 2017, 2107
Bsp1286I GDGCHC 1 cut(s) 1965
Bsp1407I TGTACA 1 cut(s) 395
Bsp19I CCATGG 2 cut(s) 365, 2304
BspANI GGCC 4 cut(s) 462, 1552, 2017, 2107
BspCNI CTCAG 3 cut(s) 1458, 1977, 2395
BspFNI CGCG 1 cut(s) 1052
BspLI GGNNCC 7 cut(s) 22, 461, 550, 932, 1018, 1440, 2095
BspMAI CTGCAG 1 cut(s) 780
BspMI ACCTGC 2 cut(s) 190, 978
BspPI GGATC 4 cut(s) 15, 28, 440, 2316
BspT107I GGYRCC 2 cut(s) 930, 2093
BsrDI GCAATG 2 cut(s) 297, 678
BsrGI TGTACA 1 cut(s) 395
BsrI ACTGG 5 cut(s) 405, 1093, 1517, 1666, 2108
BssECI CCNNGG 6 cut(s) 365, 463, 939, 1365, 1491, 2304
BssNI GRCGYC 1 cut(s) 931
BssT1I CCWWGG 5 cut(s) 365, 463, 939, 1491, 2304
Bst2UI CCWGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
Bst4CI ACNGT 5 cut(s) 556, 791, 1202, 1671, 2417
Bst6I CTCTTC 3 cut(s) 948, 1890, 1914
BstACI GRCGYC 1 cut(s) 931
BstAUI TGTACA 1 cut(s) 395
BstBAI YACGTR 2 cut(s) 680, 749
BstC8I GCNNGC 5 cut(s) 221, 225, 699, 2019, 2515
BstDEI CTNAG 5 cut(s) 945, 1466, 1964, 2147, 2382
BstDSI CCRYGG 2 cut(s) 365, 2304
BstF5I GGATG 4 cut(s) 268, 332, 1006, 1938
BstFNI CGCG 1 cut(s) 1052
BstH2I RGCGCY 4 cut(s) 100, 513, 934, 2302
BstHHI GCGC 5 cut(s) 99, 512, 933, 1126, 2301
BstMAI GTCTC 6 cut(s) 18, 59, 305, 1041, 1191, 1456
BstMCI CGRYCG 2 cut(s) 1560, 2419
BstMWI GCNNNNNNNGC 5 cut(s) 588, 781, 1361, 1786, 1814
BstNI CCWGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
BstNSI RCATGY 3 cut(s) 223, 1221, 2476
BstSCI CCNGG 6 cut(s) 16, 433, 1287, 1364, 1455, 2425
BstSFI CTRYAG 5 cut(s) 353, 776, 840, 1586, 2526
BstSNI TACGTA 1 cut(s) 680
BstUI CGCG 1 cut(s) 1052
BstV2I GAAGAC 1 cut(s) 2009
BstX2I RGATCY 5 cut(s) 20, 1300, 1633, 2308, 2460
BstYI RGATCY 5 cut(s) 20, 1300, 1633, 2308, 2460
BsuI GTATCC 2 cut(s) 125, 2441
BsuRI GGCC 4 cut(s) 462, 1552, 2017, 2107
BtgI CCRYGG 2 cut(s) 365, 2304
BtsCI GGATG 4 cut(s) 268, 332, 1006, 1938
BtsIMutI CAGTG 3 cut(s) 398, 552, 1683
BveI ACCTGC 2 cut(s) 190, 978
Cac8I GCNNGC 5 cut(s) 221, 225, 699, 2019, 2515
CaiI CAGNNNCTG 1 cut(s) 572
CfoI GCGC 5 cut(s) 99, 512, 933, 1126, 2301
Cfr13I GGNCC 1 cut(s) 460
CseI GACGC 3 cut(s) 1058, 1712, 2147
CsiI ACCWGGT 1 cut(s) 433
Csp6I GTAC 5 cut(s) 396, 1141, 1514, 2151, 2347
CviQI GTAC 5 cut(s) 396, 1141, 1514, 2151, 2347
DdeI CTNAG 5 cut(s) 945, 1466, 1964, 2147, 2382
DinI GGCGCC 1 cut(s) 932
DrdI GACNNNNNNGTC 1 cut(s) 1205
DseDI GACNNNNNNGTC 1 cut(s) 1205
Eam1104I CTCTTC 3 cut(s) 948, 1890, 1914
EarI CTCTTC 3 cut(s) 948, 1890, 1914
Ecl136II GAGCTC 1 cut(s) 1963
Eco105I TACGTA 1 cut(s) 680
Eco130I CCWWGG 5 cut(s) 365, 463, 939, 1491, 2304
Eco24I GRGCYC 1 cut(s) 1965
Eco47III AGCGCT 1 cut(s) 511
Eco53kI GAGCTC 1 cut(s) 1963
Eco57I CTGAAG 5 cut(s) 200, 258, 755, 1401, 2529
Eco72I CACGTG 1 cut(s) 749
EcoICRI GAGCTC 1 cut(s) 1963
EcoO109I RGGNCCY 1 cut(s) 460
EcoRI GAATTC 1 cut(s) 1336
EcoRII CCWGG 6 cut(s) 16, 433, 1287, 1364, 1455, 2425
EcoT14I CCWWGG 5 cut(s) 365, 463, 939, 1491, 2304
EcoT38I GRGCYC 1 cut(s) 1965
EgeI GGCGCC 1 cut(s) 932
EheI GGCGCC 1 cut(s) 932
ErhI CCWWGG 5 cut(s) 365, 463, 939, 1491, 2304
Esp3I CGTCTC 2 cut(s) 305, 1041
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FaqI GGGAC 1 cut(s) 1710
FblI GTMKAC 2 cut(s) 63, 2164
FokI GGATG 4 cut(s) 255, 319, 1013, 1945
FriOI GRGCYC 1 cut(s) 1965
FspBI CTAG 5 cut(s) 59, 464, 654, 866, 1833
GlaI GCGC 5 cut(s) 98, 511, 932, 1125, 2300
GsaI CCCAGC 1 cut(s) 1409
GsuI CTGGAG 4 cut(s) 1281, 1325, 1478, 2259
HaeII RGCGCY 4 cut(s) 100, 513, 934, 2302
HaeIII GGCC 4 cut(s) 462, 1552, 2017, 2107
HapII CCGG 2 cut(s) 561, 2356
HgaI GACGC 3 cut(s) 1058, 1712, 2147
HhaI GCGC 5 cut(s) 99, 512, 933, 1126, 2301
Hin1I GRCGYC 1 cut(s) 931
Hin6I GCGC 5 cut(s) 97, 510, 931, 1124, 2299
HinP1I GCGC 5 cut(s) 97, 510, 931, 1124, 2299
HincII GTYRAC 1 cut(s) 1428
HindII GTYRAC 1 cut(s) 1428
HindIII AAGCTT 2 cut(s) 1374, 2494
HpaII CCGG 2 cut(s) 561, 2356
HphI GGTGA 2 cut(s) 455, 2380
Hpy166II GTNNAC 8 cut(s) 64, 398, 752, 875, 1326, 1428, 1667, 2165
Hpy188III TCNNGA 8 cut(s) 74, 803, 1277, 1298, 1304, 1773, 2276, 2324
Hpy8I GTNNAC 8 cut(s) 64, 398, 752, 875, 1326, 1428, 1667, 2165
Hpy99I CGWCG 1 cut(s) 2163
HpyAV CCTTC 8 cut(s) 144, 175, 282, 854, 921, 1902, 2052, 2323
HpyCH4III ACNGT 5 cut(s) 556, 791, 1202, 1671, 2417
HpyCH4IV ACGT 5 cut(s) 679, 748, 1139, 1981, 2376
HpyF10VI GCNNNNNNNGC 5 cut(s) 588, 781, 1361, 1786, 1814
HpyF3I CTNAG 5 cut(s) 945, 1466, 1964, 2147, 2382
HpySE526I ACGT 5 cut(s) 679, 748, 1139, 1981, 2376
Hsp92I GRCGYC 1 cut(s) 931
HspAI GCGC 5 cut(s) 97, 510, 931, 1124, 2299
KasI GGCGCC 1 cut(s) 930
LmnI GCTCC 7 cut(s) 1214, 1300, 1458, 1858, 1960, 2197, 2278
LweI GCATC 6 cut(s) 341, 506, 670, 712, 713, 1322
MabI ACCWGGT 1 cut(s) 433
MaeI CTAG 5 cut(s) 59, 464, 654, 866, 1833
MaeII ACGT 5 cut(s) 679, 748, 1139, 1981, 2376
MaeIII GTNAC 3 cut(s) 129, 556, 2465
MfeI CAATTG 1 cut(s) 1041
MflI RGATCY 5 cut(s) 20, 1300, 1633, 2308, 2460
MhlI GDGCHC 1 cut(s) 1965
Mly113I GGCGCC 1 cut(s) 931
MlyI GAGTC 5 cut(s) 304, 838, 1582, 2039, 2494
MmeI TCCRAC 1 cut(s) 1580
MroXI GAANNNNTTC 4 cut(s) 568, 1068, 1437, 2363
MspA1I CMGCKG 3 cut(s) 775, 839, 977
MspI CCGG 2 cut(s) 561, 2356
MspR9I CCNGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
MunI CAATTG 1 cut(s) 1041
Mva1269I GAATGC 1 cut(s) 2079
MvaI CCWGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
MvnI CGCG 1 cut(s) 1052
MwoI GCNNNNNNNGC 5 cut(s) 588, 781, 1361, 1786, 1814
NarI GGCGCC 1 cut(s) 931
NcoI CCATGG 2 cut(s) 365, 2304
NlaIV GGNNCC 7 cut(s) 22, 461, 550, 932, 1018, 1440, 2095
NmuCI GTSAC 1 cut(s) 2465
NspI RCATGY 3 cut(s) 223, 1221, 2476
PaeI GCATGC 1 cut(s) 223
PcsI WCGNNNNNNNCGW 2 cut(s) 79, 754
PctI GAATGC 1 cut(s) 2079
PdmI GAANNNNTTC 4 cut(s) 568, 1068, 1437, 2363
PfeI GAWTC 7 cut(s) 28, 569, 881, 1036, 1643, 2138, 2522
PfoI TCCNGGA 2 cut(s) 16, 1455
PleI GAGTC 5 cut(s) 303, 837, 1581, 2039, 2494
PluTI GGCGCC 1 cut(s) 934
PmaCI CACGTG 1 cut(s) 749
PmlI CACGTG 1 cut(s) 749
PpsI GAGTC 5 cut(s) 303, 837, 1581, 2039, 2494
Ppu21I YACGTR 2 cut(s) 680, 749
Psp124BI GAGCTC 1 cut(s) 1965
Psp6I CCWGG 6 cut(s) 16, 433, 1287, 1364, 1455, 2425
PspCI CACGTG 1 cut(s) 749
PspFI CCCAGC 1 cut(s) 1405
PspGI CCWGG 6 cut(s) 16, 433, 1287, 1364, 1455, 2425
PspN4I GGNNCC 7 cut(s) 22, 461, 550, 932, 1018, 1440, 2095
PspPI GGNCC 1 cut(s) 460
PstI CTGCAG 1 cut(s) 780
PstNI CAGNNNCTG 1 cut(s) 572
PsuI RGATCY 5 cut(s) 20, 1300, 1633, 2308, 2460
PvuII CAGCTG 3 cut(s) 775, 839, 977
RsaI GTAC 5 cut(s) 397, 1142, 1515, 2152, 2348
RsaNI GTAC 5 cut(s) 396, 1141, 1514, 2151, 2347
SacI GAGCTC 1 cut(s) 1965
Sau96I GGNCC 1 cut(s) 460
SchI GAGTC 5 cut(s) 304, 838, 1582, 2039, 2494
ScrFI CCNGG 6 cut(s) 18, 435, 1289, 1366, 1457, 2427
SduI GDGCHC 1 cut(s) 1965
SexAI ACCWGGT 1 cut(s) 433
SfaNI GCATC 6 cut(s) 341, 506, 670, 712, 713, 1322
SfcI CTRYAG 5 cut(s) 353, 776, 840, 1586, 2526
SfoI GGCGCC 1 cut(s) 932
SmlI CTYRAG 3 cut(s) 242, 373, 2502
SmoI CTYRAG 3 cut(s) 242, 373, 2502
SnaBI TACGTA 1 cut(s) 680
SphI GCATGC 1 cut(s) 223
SspDI GGCGCC 1 cut(s) 930
SspMI CTAG 5 cut(s) 59, 464, 654, 866, 1833
SstI GAGCTC 1 cut(s) 1965
StyD4I CCNGG 6 cut(s) 16, 433, 1287, 1364, 1455, 2425
StyI CCWWGG 5 cut(s) 365, 463, 939, 1491, 2304
TaaI ACNGT 5 cut(s) 556, 791, 1202, 1671, 2417
TaiI ACGT 5 cut(s) 682, 751, 1142, 1984, 2379
TaqI TCGA 4 cut(s) 541, 720, 2089, 2224
TaqII GACCGA 1 cut(s) 1574
TatI WGTACW 3 cut(s) 395, 2150, 2346
TfiI GAWTC 7 cut(s) 28, 569, 881, 1036, 1643, 2138, 2522
TscAI CASTG 3 cut(s) 405, 559, 1683
TseFI GTSAC 1 cut(s) 2465
Tsp45I GTSAC 1 cut(s) 2465
TspGWI ACGGA 2 cut(s) 71, 107
TspRI CASTG 3 cut(s) 405, 559, 1683
XapI RAATTY 5 cut(s) 193, 617, 807, 1336, 1801
XceI RCATGY 3 cut(s) 223, 1221, 2476
XmaJI CCTAGG 1 cut(s) 463
XmiI GTMKAC 2 cut(s) 63, 2164
XmnI GAANNNNTTC 4 cut(s) 568, 1068, 1437, 2363
XspI CTAG 5 cut(s) 59, 464, 654, 866, 1833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.