Rorug01G0101100

Transcription initiation factor TFIID subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0004130
Physical Location & Seq
Reverse (-)
16845373 .. 16856155
10783 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0101100.1

Sequence Viewer

Length: 1464 bp
ATGGCGCAGCAAAAGGTCATGAGAGAAGTTGATGGGAATACCAGCTCGAATTTAAAGGCTAATTTTGAAATTCAGGATATGGACACATCTGGGAAAATGGTCAGTCAGGGGTTGAAGCAATTGACACATATTCATGAGACTCCTAGTGGACGTGAGGAGGAGATCAAAAAATTGAGCTCTCTTTTTAAGAGTGGTTTTGAATTGAAAGTGGGGGAGGGCTCTGGAGGATTGTCATTCCCCTTCCAACCAATGACTTTCACGTTGGGGGCTAAGAAGTCTTCTCCGGGCAGTAGTAAAAAGCTATTGGGAAGGAAGTTTGTTAAAGTGGCAGCTAGAAGGAAGCTTTTGTTAACAGCGGAGGGGTCAGAGATTCAGCAGGAGAACGAGGGGCAGCTGGTTAGTTTTATCCGGACTTTGGTGTTGGTGTCAGCAATGGCCGTCAACGTTTCCACCTCTTCCCCAGCTCTCTTCTCATCCAAATCCGACCATTCCTTGTGTTTTCGTCGGTCCGACCCACACCCCAATTTCCCAAAATTCGACCGTTGCAGTTTTCCTCGACATAACCCTCCAAGACTGAGCAGCTATGCTACGAATGCTTCATTACTAAGAGCCAAAGCCTCTCAGAATACAAGAGAGCCCATGCTTCCTCCTTACAATGTGCTCATCACCGGTTCAACCAAAGGTATTGGTTTTGCTCTAGCCAAAGAGTTCCTCAGAGCAGGAGATAACGTTGTGATTTGCTCTAGATCAGCTGAACGAGTTGAATCTGCTGTTCAGAGCCTTAGAGAAGATTTTGGCGAGCAGCGTGTGTGGGGTACTAAATGTGATGTTAGGGAAGGGAAAGATGTGAAGGACTTAGTGGCCTTTGCACAAAAGAACCTGAAATACATTGATATATGGATTAATAATGCAGGATCAAATGCTTATAGTTATAAACCCCTGGCAGAGGCTTCAGATGAAGATCTTATTGAAGTTGTCACCACAAATACACTTGGTTTGATGATATGTTGCCGTGAGGCAATAAAGATGATGTTGGACCAGCCTCGAGGTGGTCATGTTTTCAACATCGATGGAGCTGGTTCTGATGGAAGACCAACCCCAAGGTTTGCTGCATATGGAGCAACAAAGCGTAGTGTGGTGCATTTGACAAAATCATTACAGGCAGAATTACAGATGCAAGATGTCAAGCAAGTCATAGTGCATAACTTGTCGCCAGGGATGGTTACAACTGATCTTCTCATGTCTGGTGCAACTACGAAGCAGGCAAAGTTTTTCATCAATGTTCTGGCAGAACCAGCTGAAGTGGTTGCCGAGTATCTTGTTCCAAATATAAGATCCATCCCTACCAAGGGATCAATGAAGCCCACTTACATCCGTTTCCTAACAGGGATGAAAGCCTACTCCCAGATATTCTCAAGATTTGCTTTTGGTGCAAGAAGGAACAGATATTTGCTCGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0000988 GO:0000989 GO:0001076 GO:0001129 GO:0001132 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008080 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016740 GO:0016746 GO:0016747 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034212 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043565 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0061733 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
Bromodomain DUF3591 TBP-binding ubiquitin zf-CCHC_6

Protein Analysis

487

Amino Acids

53.76

Weight (kDa)

9.52

Isoelectric Point (pI)

42.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SDR PF23441 219 - 417 3.2e-08 SDR-like rossmann domain
adh_short PF00106 220 - 415 1.3e-42 short chain dehydrogenase
KR PF08659 220 - 328 1.1e-06 KR domain
adh_short_C2 PF13561 226 - 418 8.1e-31 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
AbsI CCTCGAGG 1 cut(s) 1044
AccIII TCCGGA 1 cut(s) 408
AciI CCGC 1 cut(s) 356
AclI AACGTT 2 cut(s) 444, 729
AclWI GGATC 3 cut(s) 922, 1329, 1360
AcoI YGGCCR 1 cut(s) 435
AcsI RAATTY 3 cut(s) 49, 69, 533
AcuI CTGAAG 2 cut(s) 936, 1320
AfaI GTAC 1 cut(s) 817
AfiI CCNNNNNNNGG 5 cut(s) 415, 946, 1049, 1348, 1349
AgeI ACCGGT 1 cut(s) 668
AgsI TTSAA 8 cut(s) 68, 115, 200, 205, 675, 764, 971, 1063
AjiI CACGTC 1 cut(s) 152
AjnI CCWGG 2 cut(s) 939, 1213
Alw21I GWGCWC 2 cut(s) 179, 663
Alw26I GTCTC 1 cut(s) 131
AlwI GGATC 3 cut(s) 922, 1329, 1360
Ama87I CYCGRG 1 cut(s) 1044
Aor13HI TCCGGA 1 cut(s) 408
AoxI GGCC 2 cut(s) 435, 861
ApeKI GCWGC 6 cut(s) 7, 329, 391, 579, 802, 1109
ApoI RAATTY 3 cut(s) 49, 69, 533
AseI ATTAAT 1 cut(s) 903
AsiGI ACCGGT 1 cut(s) 668
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 2 cut(s) 507, 1036
AsuC2I CCSGG 1 cut(s) 285
AsuHPI GGTGA 2 cut(s) 658, 970
AvaI CYCGRG 1 cut(s) 1044
AvaII GGWCC 2 cut(s) 507, 1036
BanII GRGCYC 3 cut(s) 179, 221, 639
BarI GAAGNNNNNNTAC 2 cut(s) 1352, 1384
BbsI GAAGAC 2 cut(s) 270, 1096
Bbv12I GWGCWC 2 cut(s) 179, 663
BbvI GCAGC 6 cut(s) 19, 341, 403, 591, 814, 1096
BccI CCATC 5 cut(s) 26, 1064, 1079, 1213, 1346
BceAI ACGGC 2 cut(s) 422, 996
BciT130I CCWGG 2 cut(s) 941, 1215
BcnI CCSGG 1 cut(s) 285
BcoDI GTCTC 1 cut(s) 131
BfaI CTAG 4 cut(s) 144, 333, 698, 744
BglII AGATCT 1 cut(s) 961
BisI GCNGC 6 cut(s) 8, 330, 392, 580, 803, 1110
BlsI GCNGC 6 cut(s) 9, 331, 393, 581, 804, 1111
Bme1390I CCNGG 3 cut(s) 285, 941, 1215
Bme18I GGWCC 2 cut(s) 507, 1036
BmeT110I CYCGRG 1 cut(s) 1044
BmgBI CACGTC 1 cut(s) 152
BmgT120I GGNCC 2 cut(s) 507, 1036
BmrFI CCNGG 3 cut(s) 285, 941, 1215
BmsI GCATC 1 cut(s) 1164
BpiI GAAGAC 2 cut(s) 270, 1096
BpmI CTGGAG 1 cut(s) 243
BpuEI CTTGAG 1 cut(s) 1399
BpuMI CCSGG 1 cut(s) 285
Bsa29I ATCGAT 1 cut(s) 1068
BsaBI GATNNNNATC 1 cut(s) 960
BsaJI CCNNGG 4 cut(s) 939, 1100, 1214, 1347
BsaWI WCCGGW 2 cut(s) 408, 668
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 5 cut(s) 415, 946, 1049, 1348, 1349
Bse118I RCCGGY 1 cut(s) 668
Bse3DI GCAATG 1 cut(s) 438
Bse8I GATNNNNATC 1 cut(s) 960
BseAI TCCGGA 1 cut(s) 408
BseBI CCWGG 2 cut(s) 941, 1215
BseCI ATCGAT 1 cut(s) 1068
BseDI CCNNGG 4 cut(s) 939, 1100, 1214, 1347
BseGI GGATG 5 cut(s) 473, 1224, 1338, 1371, 1395
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 5 cut(s) 415, 946, 1049, 1348, 1349
BseMI GCAATG 1 cut(s) 438
BseMII CTCAG 3 cut(s) 566, 635, 727
BseRI GAGGAG 2 cut(s) 170, 173
BseXI GCAGC 6 cut(s) 19, 341, 403, 591, 814, 1096
BseYI CCCAGC 1 cut(s) 460
Bsh1285I CGRYCG 1 cut(s) 541
BshFI GGCC 2 cut(s) 437, 863
BshTI ACCGGT 1 cut(s) 668
BshVI ATCGAT 1 cut(s) 1068
BsiEI CGRYCG 1 cut(s) 541
BsiHKAI GWGCWC 2 cut(s) 179, 663
BsiHKCI CYCGRG 1 cut(s) 1044
BsiSI CCGG 3 cut(s) 284, 409, 669
BslI CCNNNNNNNGG 5 cut(s) 415, 946, 1049, 1348, 1349
BsmAI GTCTC 1 cut(s) 131
BsmI GAATGC 1 cut(s) 598
BsnI GGCC 2 cut(s) 437, 863
BsoBI CYCGRG 1 cut(s) 1044
Bsp1286I GDGCHC 4 cut(s) 179, 221, 639, 663
Bsp13I TCCGGA 1 cut(s) 408
Bsp143I GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
BspACI CCGC 1 cut(s) 356
BspANI GGCC 2 cut(s) 437, 863
BspCNI CTCAG 3 cut(s) 567, 634, 726
BspDI ATCGAT 1 cut(s) 1068
BspEI TCCGGA 1 cut(s) 408
BspHI TCATGA 2 cut(s) 18, 133
BspPI GGATC 3 cut(s) 922, 1329, 1360
BsrDI GCAATG 1 cut(s) 438
BsrFI RCCGGY 1 cut(s) 668
BssAI RCCGGY 1 cut(s) 668
BssECI CCNNGG 4 cut(s) 939, 1100, 1214, 1347
BssMI GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
BssT1I CCWWGG 2 cut(s) 1100, 1347
Bst2UI CCWGG 2 cut(s) 941, 1215
Bst4CI ACNGT 1 cut(s) 542
Bst6I CTCTTC 2 cut(s) 460, 473
BstC8I GCNNGC 2 cut(s) 800, 1263
BstDEI CTNAG 7 cut(s) 270, 575, 605, 621, 713, 782, 856
BstENI CCTNNNNNAGG 1 cut(s) 944
BstF5I GGATG 5 cut(s) 473, 1224, 1338, 1371, 1395
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 7 cut(s) 165, 749, 917, 964, 1234, 1337, 1355
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
BstMCI CGRYCG 1 cut(s) 541
BstMWI GCNNNNNNNGC 4 cut(s) 593, 1118, 1295, 1430
BstNI CCWGG 2 cut(s) 941, 1215
BstSCI CCNGG 3 cut(s) 283, 939, 1213
BstV1I GCAGC 6 cut(s) 19, 341, 403, 591, 814, 1096
BstV2I GAAGAC 2 cut(s) 270, 1096
BstX2I RGATCY 2 cut(s) 961, 1334
BstYI RGATCY 2 cut(s) 961, 1334
Bsu15I ATCGAT 1 cut(s) 1068
BsuRI GGCC 2 cut(s) 437, 863
BsuTUI ATCGAT 1 cut(s) 1068
BtrI CACGTC 1 cut(s) 152
BtsCI GGATG 5 cut(s) 473, 1224, 1338, 1371, 1395
Cac8I GCNNGC 2 cut(s) 800, 1263
CciI TCATGA 2 cut(s) 18, 133
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 1 cut(s) 668
Cfr13I GGNCC 2 cut(s) 507, 1036
ClaI ATCGAT 1 cut(s) 1068
CpoI CGGWCCG 1 cut(s) 507
Csp6I GTAC 1 cut(s) 816
CspAI ACCGGT 1 cut(s) 668
CspI CGGWCCG 1 cut(s) 507
CviAII CATG 5 cut(s) 19, 134, 640, 1055, 1240
CviQI GTAC 1 cut(s) 816
DdeI CTNAG 7 cut(s) 270, 575, 605, 621, 713, 782, 856
DpnI GATC 7 cut(s) 164, 748, 916, 963, 1233, 1336, 1354
DpnII GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
DraI TTTAAA 1 cut(s) 54
EaeI YGGCCR 1 cut(s) 435
Eam1104I CTCTTC 2 cut(s) 460, 473
EarI CTCTTC 2 cut(s) 460, 473
Ecl136II GAGCTC 1 cut(s) 177
Eco130I CCWWGG 2 cut(s) 1100, 1347
Eco24I GRGCYC 3 cut(s) 179, 221, 639
Eco47I GGWCC 2 cut(s) 507, 1036
Eco53kI GAGCTC 1 cut(s) 177
Eco57I CTGAAG 2 cut(s) 936, 1320
Eco88I CYCGRG 1 cut(s) 1044
EcoICRI GAGCTC 1 cut(s) 177
EcoNI CCTNNNNNAGG 1 cut(s) 944
EcoRII CCWGG 2 cut(s) 939, 1213
EcoT14I CCWWGG 2 cut(s) 1100, 1347
EcoT38I GRGCYC 3 cut(s) 179, 221, 639
ErhI CCWWGG 2 cut(s) 1100, 1347
FaeI CATG 5 cut(s) 22, 137, 643, 1058, 1243
FalI AAGNNNNNCTT 2 cut(s) 1408, 1440
FatI CATG 5 cut(s) 18, 133, 639, 1054, 1239
FauNDI CATATG 1 cut(s) 1114
Fnu4HI GCNGC 6 cut(s) 8, 330, 392, 580, 803, 1110
FokI GGATG 5 cut(s) 460, 1231, 1325, 1358, 1402
FriOI GRGCYC 3 cut(s) 179, 221, 639
Fsp4HI GCNGC 6 cut(s) 8, 330, 392, 580, 803, 1110
FspBI CTAG 4 cut(s) 144, 333, 698, 744
GlaI GCGC 1 cut(s) 6
GluI GCNGC 6 cut(s) 8, 330, 392, 580, 803, 1110
GsaI CCCAGC 1 cut(s) 464
GsuI CTGGAG 1 cut(s) 243
HaeIII GGCC 2 cut(s) 437, 863
HapII CCGG 3 cut(s) 284, 409, 669
HhaI GCGC 1 cut(s) 7
Hin1II CATG 5 cut(s) 22, 137, 643, 1058, 1243
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 2 cut(s) 351, 442
HindII GTYRAC 2 cut(s) 351, 442
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 3 cut(s) 139, 370, 764
HpaI GTTAAC 1 cut(s) 351
HpaII CCGG 3 cut(s) 284, 409, 669
HphI GGTGA 2 cut(s) 658, 970
Hpy166II GTNNAC 3 cut(s) 149, 351, 442
Hpy188I TCNGA 8 cut(s) 367, 484, 511, 624, 716, 777, 955, 1084
Hpy188III TCNNGA 7 cut(s) 19, 74, 134, 222, 409, 744, 1416
Hpy8I GTNNAC 3 cut(s) 149, 351, 442
Hpy99I CGWCG 1 cut(s) 507
HpyAV CCTTC 6 cut(s) 250, 303, 330, 830, 844, 1431
HpyCH4III ACNGT 1 cut(s) 542
HpyCH4IV ACGT 4 cut(s) 151, 260, 444, 729
HpyCH4V TGCA 9 cut(s) 546, 869, 911, 1112, 1141, 1177, 1201, 1250, 1433
HpyF10VI GCNNNNNNNGC 4 cut(s) 593, 1118, 1295, 1430
HpyF3I CTNAG 7 cut(s) 270, 575, 605, 621, 713, 782, 856
HpySE526I ACGT 4 cut(s) 151, 260, 444, 729
Hsp92II CATG 5 cut(s) 22, 137, 643, 1058, 1243
HspAI GCGC 1 cut(s) 5
Kpn2I TCCGGA 1 cut(s) 408
KspAI GTTAAC 1 cut(s) 351
Kzo9I GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
LmnI GCTCC 2 cut(s) 1073, 1118
Lsp1109I GCAGC 6 cut(s) 19, 341, 403, 591, 814, 1096
LweI GCATC 1 cut(s) 1164
MaeI CTAG 4 cut(s) 144, 333, 698, 744
MaeII ACGT 4 cut(s) 151, 260, 444, 729
MaeIII GTNAC 2 cut(s) 976, 1222
MalI GATC 7 cut(s) 164, 748, 916, 963, 1233, 1336, 1354
MboI GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
MboII GAAGA 7 cut(s) 270, 447, 460, 800, 971, 1101, 1226
MfeI CAATTG 1 cut(s) 119
MflI RGATCY 2 cut(s) 961, 1334
MhlI GDGCHC 4 cut(s) 179, 221, 639, 663
MluCI AATT 9 cut(s) 49, 61, 69, 119, 170, 200, 523, 533, 1166
MlyI GAGTC 1 cut(s) 133
MmeI TCCRAC 4 cut(s) 268, 507, 534, 1014
MroI TCCGGA 1 cut(s) 408
MseI TTAA 6 cut(s) 53, 186, 321, 350, 903, 1462
MslI CAYNNNNRTG 1 cut(s) 132
MspA1I CMGCKG 4 cut(s) 356, 394, 752, 1298
MspI CCGG 3 cut(s) 284, 409, 669
MspR9I CCNGG 3 cut(s) 285, 941, 1215
MunI CAATTG 1 cut(s) 119
Mva1269I GAATGC 1 cut(s) 598
MvaI CCWGG 2 cut(s) 941, 1215
MwoI GCNNNNNNNGC 4 cut(s) 593, 1118, 1295, 1430
NciI CCSGG 1 cut(s) 285
NdeI CATATG 1 cut(s) 1114
NdeII GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
NlaIII CATG 5 cut(s) 22, 137, 643, 1058, 1243
NmeAIII GCCGAG 1 cut(s) 1336
NmuCI GTSAC 1 cut(s) 976
PaeR7I CTCGAG 1 cut(s) 1044
PagI TCATGA 2 cut(s) 18, 133
PctI GAATGC 1 cut(s) 598
PfeI GAWTC 2 cut(s) 370, 764
PinAI ACCGGT 1 cut(s) 668
PkrI GCNGC 6 cut(s) 9, 331, 393, 581, 804, 1111
PleI GAGTC 1 cut(s) 133
PpsI GAGTC 1 cut(s) 133
PshBI ATTAAT 1 cut(s) 903
PsiI TTATAA 1 cut(s) 933
Psp124BI GAGCTC 1 cut(s) 179
Psp1406I AACGTT 2 cut(s) 444, 729
Psp6I CCWGG 2 cut(s) 939, 1213
PspFI CCCAGC 1 cut(s) 460
PspGI CCWGG 2 cut(s) 939, 1213
PspPI GGNCC 2 cut(s) 507, 1036
PspXI VCTCGAGB 1 cut(s) 1044
PsrI GAACNNNNNNTAC 2 cut(s) 869, 901
PsuI RGATCY 2 cut(s) 961, 1334
PvuII CAGCTG 3 cut(s) 394, 752, 1298
RsaI GTAC 1 cut(s) 817
RsaNI GTAC 1 cut(s) 816
RseI CAYNNNNRTG 1 cut(s) 132
Rsr2I CGGWCCG 1 cut(s) 507
RsrII CGGWCCG 1 cut(s) 507
SacI GAGCTC 1 cut(s) 179
SaqAI TTAA 6 cut(s) 53, 186, 321, 350, 903, 1462
SatI GCNGC 6 cut(s) 8, 330, 392, 580, 803, 1110
Sau3AI GATC 7 cut(s) 162, 746, 914, 961, 1231, 1334, 1352
Sau96I GGNCC 2 cut(s) 507, 1036
SchI GAGTC 1 cut(s) 133
ScrFI CCNGG 3 cut(s) 285, 941, 1215
SduI GDGCHC 4 cut(s) 179, 221, 639, 663
SfaNI GCATC 1 cut(s) 1164
Sfr274I CTCGAG 1 cut(s) 1044
SinI GGWCC 2 cut(s) 507, 1036
SlaI CTCGAG 1 cut(s) 1044
SmiMI CAYNNNNRTG 1 cut(s) 132
SmlI CTYRAG 2 cut(s) 1044, 1414
SmoI CTYRAG 2 cut(s) 1044, 1414
Sse9I AATT 9 cut(s) 49, 61, 69, 119, 170, 200, 523, 533, 1166
SsiI CCGC 1 cut(s) 356
SspMI CTAG 4 cut(s) 144, 333, 698, 744
SstI GAGCTC 1 cut(s) 179
StyD4I CCNGG 3 cut(s) 283, 939, 1213
StyI CCWWGG 2 cut(s) 1100, 1347
TaaI ACNGT 1 cut(s) 542
TaiI ACGT 4 cut(s) 154, 263, 447, 732
TaqI TCGA 6 cut(s) 47, 537, 556, 1045, 1068, 1455
TaqII GACCGA 1 cut(s) 495
TasI AATT 9 cut(s) 49, 61, 69, 119, 170, 200, 523, 533, 1166
TfiI GAWTC 2 cut(s) 370, 764
Tru1I TTAA 6 cut(s) 53, 186, 321, 350, 903, 1462
Tru9I TTAA 6 cut(s) 53, 186, 321, 350, 903, 1462
TseFI GTSAC 1 cut(s) 976
TseI GCWGC 6 cut(s) 7, 329, 391, 579, 802, 1109
Tsp45I GTSAC 1 cut(s) 976
TspDTI ATGAA 6 cut(s) 122, 588, 972, 1264, 1373, 1406
TspGWI ACGGA 1 cut(s) 1364
VpaK11BI GGWCC 2 cut(s) 507, 1036
VspI ATTAAT 1 cut(s) 903
XagI CCTNNNNNAGG 1 cut(s) 944
XapI RAATTY 3 cut(s) 49, 69, 533
XbaI TCTAGA 1 cut(s) 743
XcmI CCANNNNNNNNNTGG 1 cut(s) 1046
XhoI CTCGAG 1 cut(s) 1044
XspI CTAG 4 cut(s) 144, 333, 698, 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.