Transcription initiation factor TFIID subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32750 AT3G19040 AT3G19040 |
| fragaria_vesca | FvH4_1g29900 FvH4_1g29900 FvH4_1g29900 FvH4_3g05980 FvH4_3g05980 FvH4_3g05980 |
| malus_domestica | MD04G1047300.v1.1 |
| prunus_persica | Prupe.1G559000_v2.0.a1 |
| pyrus_communis | pycom04g04140 |
| rosa_chinensis | RchiOBHm_Chr3g0492481 RchiOBHm_Chr5g0013481 |
| rosa_laevigata | RLG00000022765 RLG00000029713 RLG00000032019 |
| rosa_multiflora | Rmu_sc0000971.1_g000001 Rmu_sc0020049.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00063080 Rroxscaffold_6G00392250 |
| rosa_rugosa | Rorug01G0101000 Rorug01G0101100 Rorug05G0009500 |
| rosa_samantha | Rh3AG304400 Rh3BG340200 Rh3CG337500 Rh3DG339500 Rh5BG101100 Rh5CG112900 Rh5DG099700 |
| rosa_wichuraiana | Rw3G026820 Rw5G009130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1835, 1959 |
| Acc36I | ACCTGC | 1 cut(s) | 1690 |
| AccB1I | GGYRCC | 2 cut(s) | 847, 2410 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1553 |
| AccI | GTMKAC | 1 cut(s) | 2571 |
| AccII | CGCG | 4 cut(s) | 904, 2901, 3078, 4684 |
| AccIII | TCCGGA | 1 cut(s) | 325 |
| AciI | CCGC | 7 cut(s) | 251, 506, 845, 2011, 2899, 4140, 4684 |
| AclWI | GGATC | 6 cut(s) | 535, 882, 1360, 2266, 2660, 3035 |
| AcoI | YGGCCR | 1 cut(s) | 3049 |
| AcuI | CTGAAG | 2 cut(s) | 1730, 3450 |
| AfaI | GTAC | 7 cut(s) | 605, 836, 2038, 2992, 3894, 4507, 4812 |
| AflII | CTTAAG | 2 cut(s) | 1216, 1475 |
| AflIII | ACRYGT | 3 cut(s) | 216, 2379, 2574 |
| AjnI | CCWGG | 9 cut(s) | 820, 1248, 2074, 2101, 2524, 3523, 4081, 4183, 4508 |
| Alw21I | GWGCWC | 5 cut(s) | 1561, 2222, 2392, 2607, 2647 |
| Alw26I | GTCTC | 7 cut(s) | 969, 1332, 2366, 2526, 3624, 3962, 4236 |
| Alw44I | GTGCAC | 2 cut(s) | 2218, 2643 |
| AlwI | GGATC | 6 cut(s) | 535, 882, 1360, 2266, 2660, 3035 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1013, 1046, 3971 |
| Ama87I | CYCGRG | 1 cut(s) | 121 |
| Aor13HI | TCCGGA | 1 cut(s) | 325 |
| AoxI | GGCC | 9 cut(s) | 818, 1491, 3031, 3049, 3055, 4295, 4649, 4728, 4739 |
| ApaLI | GTGCAC | 2 cut(s) | 2218, 2643 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2455, 3651, 4062 |
| AspA2I | CCTAGG | 1 cut(s) | 3058 |
| AspLEI | GCGC | 2 cut(s) | 3080, 3865 |
| AsuC2I | CCSGG | 1 cut(s) | 3053 |
| AvaI | CYCGRG | 1 cut(s) | 121 |
| AvrII | CCTAGG | 1 cut(s) | 3058 |
| BaeGI | GKGCMC | 3 cut(s) | 833, 2222, 2647 |
| BanI | GGYRCC | 2 cut(s) | 847, 2410 |
| BanII | GRGCYC | 1 cut(s) | 1561 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1309, 1341 |
| Bbv12I | GWGCWC | 5 cut(s) | 1561, 2222, 2392, 2607, 2647 |
| BceAI | ACGGC | 2 cut(s) | 2565, 4310 |
| BciT130I | CCWGG | 9 cut(s) | 822, 1250, 2076, 2103, 2526, 3525, 4083, 4185, 4510 |
| BciVI | GTATCC | 1 cut(s) | 1773 |
| BclI | TGATCA | 4 cut(s) | 925, 1873, 2248, 3328 |
| BcnI | CCSGG | 1 cut(s) | 3053 |
| BcoDI | GTCTC | 7 cut(s) | 969, 1332, 2366, 2526, 3624, 3962, 4236 |
| BfaI | CTAG | 9 cut(s) | 866, 1131, 1223, 1796, 1922, 1991, 3059, 3260, 3924 |
| BfmI | CTRYAG | 3 cut(s) | 1694, 2948, 4284 |
| BfrI | CTTAAG | 2 cut(s) | 1216, 1475 |
| BfuAI | ACCTGC | 1 cut(s) | 1690 |
| BfuI | GTATCC | 1 cut(s) | 1773 |
| BglII | AGATCT | 2 cut(s) | 862, 3853 |
| BlnI | CCTAGG | 1 cut(s) | 3058 |
| BmeT110I | CYCGRG | 1 cut(s) | 121 |
| BmrI | ACTGGG | 1 cut(s) | 946 |
| BmsI | GCATC | 5 cut(s) | 145, 238, 2936, 3286, 4698 |
| BmuI | ACTGGG | 1 cut(s) | 946 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 782, 814 |
| BpmI | CTGGAG | 8 cut(s) | 2124, 3507, 3693, 3861, 4104, 4206, 4284, 4598 |
| BpuEI | CTTGAG | 3 cut(s) | 1138, 1797, 2390 |
| BpuMI | CCSGG | 1 cut(s) | 3053 |
| BsaAI | YACGTR | 1 cut(s) | 834 |
| BsaBI | GATNNNNATC | 1 cut(s) | 873 |
| BsaI | GGTCTC | 1 cut(s) | 4236 |
| BsaJI | CCNNGG | 9 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3052, 3058, 4006 |
| BsaWI | WCCGGW | 1 cut(s) | 325 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3729, 3759, 4308, 4338 |
| Bse118I | RCCGGY | 1 cut(s) | 3447 |
| Bse1I | ACTGG | 9 cut(s) | 512, 691, 941, 1126, 1366, 3136, 3676, 3770, 4109 |
| Bse3DI | GCAATG | 2 cut(s) | 1531, 2892 |
| Bse8I | GATNNNNATC | 1 cut(s) | 873 |
| BseAI | TCCGGA | 1 cut(s) | 325 |
| BseBI | CCWGG | 9 cut(s) | 822, 1250, 2076, 2103, 2526, 3525, 4083, 4185, 4510 |
| BseDI | CCNNGG | 9 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3052, 3058, 4006 |
| BseJI | GATNNNNATC | 1 cut(s) | 873 |
| BseMI | GCAATG | 2 cut(s) | 1531, 2892 |
| BseNI | ACTGG | 9 cut(s) | 512, 691, 941, 1126, 1366, 3136, 3676, 3770, 4109 |
| BseRI | GAGGAG | 5 cut(s) | 80, 200, 362, 461, 4490 |
| BseSI | GKGCMC | 3 cut(s) | 833, 2222, 2647 |
| BseYI | CCCAGC | 3 cut(s) | 3272, 3512, 4130 |
| BsgI | GTGCAG | 2 cut(s) | 159, 1668 |
| Bsh1236I | CGCG | 4 cut(s) | 904, 2901, 3078, 4684 |
| BshFI | GGCC | 9 cut(s) | 820, 1493, 3033, 3051, 3057, 4297, 4651, 4730, 4741 |
| BshNI | GGYRCC | 2 cut(s) | 847, 2410 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1561, 2222, 2392, 2607, 2647 |
| BsiHKCI | CYCGRG | 1 cut(s) | 121 |
| BsiSI | CCGG | 3 cut(s) | 326, 3052, 3448 |
| BslFI | GGGAC | 5 cut(s) | 10, 971, 1063, 1391, 2597 |
| BsmAI | GTCTC | 7 cut(s) | 969, 1332, 2366, 2526, 3624, 3962, 4236 |
| BsmFI | GGGAC | 5 cut(s) | 10, 971, 1063, 1391, 2597 |
| BsmI | GAATGC | 3 cut(s) | 289, 3559, 3703 |
| BsnI | GGCC | 9 cut(s) | 820, 1493, 3033, 3051, 3057, 4297, 4651, 4730, 4741 |
| Bso31I | GGTCTC | 1 cut(s) | 4236 |
| BsoBI | CYCGRG | 1 cut(s) | 121 |
| Bsp1286I | GDGCHC | 6 cut(s) | 833, 1561, 2222, 2392, 2607, 2647 |
| Bsp13I | TCCGGA | 1 cut(s) | 325 |
| Bsp1407I | TGTACA | 1 cut(s) | 2990 |
| Bsp19I | CCATGG | 2 cut(s) | 633, 2960 |
| BspACI | CCGC | 7 cut(s) | 251, 506, 845, 2011, 2899, 4140, 4684 |
| BspANI | GGCC | 9 cut(s) | 820, 1493, 3033, 3051, 3057, 4297, 4651, 4730, 4741 |
| BspEI | TCCGGA | 1 cut(s) | 325 |
| BspFNI | CGCG | 4 cut(s) | 904, 2901, 3078, 4684 |
| BspHI | TCATGA | 3 cut(s) | 1876, 2508, 3331 |
| BspMI | ACCTGC | 1 cut(s) | 1690 |
| BspPI | GGATC | 6 cut(s) | 535, 882, 1360, 2266, 2660, 3035 |
| BspQI | GCTCTTC | 2 cut(s) | 2595, 2732 |
| BspT107I | GGYRCC | 2 cut(s) | 847, 2410 |
| BspTI | CTTAAG | 2 cut(s) | 1216, 1475 |
| BspTNI | GGTCTC | 1 cut(s) | 4236 |
| BsrDI | GCAATG | 2 cut(s) | 1531, 2892 |
| BsrFI | RCCGGY | 1 cut(s) | 3447 |
| BsrGI | TGTACA | 1 cut(s) | 2990 |
| BsrI | ACTGG | 9 cut(s) | 512, 691, 941, 1126, 1366, 3136, 3676, 3770, 4109 |
| BssAI | RCCGGY | 1 cut(s) | 3447 |
| BssECI | CCNNGG | 9 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3052, 3058, 4006 |
| BssT1I | CCWWGG | 8 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3058, 4006 |
| Bst2UI | CCWGG | 9 cut(s) | 822, 1250, 2076, 2103, 2526, 3525, 4083, 4185, 4510 |
| Bst4CI | ACNGT | 8 cut(s) | 1888, 1945, 3125, 3254, 3565, 3973, 4312, 4747 |
| Bst6I | CTCTTC | 6 cut(s) | 651, 660, 2595, 2732, 2787, 4494 |
| BstAFI | CTTAAG | 2 cut(s) | 1216, 1475 |
| BstAUI | TGTACA | 1 cut(s) | 2990 |
| BstBAI | YACGTR | 1 cut(s) | 834 |
| BstC8I | GCNNGC | 4 cut(s) | 1323, 2816, 2820, 3214 |
| BstDSI | CCRYGG | 2 cut(s) | 633, 2960 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 149, 1812 |
| BstFNI | CGCG | 4 cut(s) | 904, 2901, 3078, 4684 |
| BstHHI | GCGC | 2 cut(s) | 3080, 3865 |
| BstMAI | GTCTC | 7 cut(s) | 969, 1332, 2366, 2526, 3624, 3962, 4236 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 284, 817, 1848, 2560, 3431, 3434 |
| BstNI | CCWGG | 9 cut(s) | 822, 1250, 2076, 2103, 2526, 3525, 4083, 4185, 4510 |
| BstNSI | RCATGY | 9 cut(s) | 220, 1345, 1390, 2383, 2554, 2578, 2818, 3801, 4420 |
| BstSFI | CTRYAG | 3 cut(s) | 1694, 2948, 4284 |
| BstSLI | GKGCMC | 3 cut(s) | 833, 2222, 2647 |
| BstUI | CGCG | 4 cut(s) | 904, 2901, 3078, 4684 |
| BstX2I | RGATCY | 4 cut(s) | 862, 874, 2258, 3853 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1256, 3109 |
| BstYI | RGATCY | 4 cut(s) | 862, 874, 2258, 3853 |
| BsuI | GTATCC | 1 cut(s) | 1773 |
| BsuRI | GGCC | 9 cut(s) | 820, 1493, 3033, 3051, 3057, 4297, 4651, 4730, 4741 |
| BtgI | CCRYGG | 2 cut(s) | 633, 2960 |
| BtgZI | GCGATG | 1 cut(s) | 261 |
| BtsI | GCAGTG | 5 cut(s) | 1647, 3114, 3223, 4274, 4443 |
| BtsIMutI | CAGTG | 8 cut(s) | 228, 1647, 1950, 3114, 3223, 3259, 4274, 4443 |
| BveI | ACCTGC | 1 cut(s) | 1690 |
| Cac8I | GCNNGC | 4 cut(s) | 1323, 2816, 2820, 3214 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1013, 1046, 3971 |
| CciI | TCATGA | 3 cut(s) | 1876, 2508, 3331 |
| CfoI | GCGC | 2 cut(s) | 3080, 3865 |
| Cfr10I | RCCGGY | 1 cut(s) | 3447 |
| CseI | GACGC | 5 cut(s) | 893, 1653, 2084, 2475, 4781 |
| Csp6I | GTAC | 7 cut(s) | 604, 835, 2037, 2991, 3893, 4506, 4811 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3736, 3771 |
| CviQI | GTAC | 7 cut(s) | 604, 835, 2037, 2991, 3893, 4506, 4811 |
| EaeI | YGGCCR | 1 cut(s) | 3049 |
| Eam1104I | CTCTTC | 6 cut(s) | 651, 660, 2595, 2732, 2787, 4494 |
| EarI | CTCTTC | 6 cut(s) | 651, 660, 2595, 2732, 2787, 4494 |
| Ecl136II | GAGCTC | 1 cut(s) | 1559 |
| Eco130I | CCWWGG | 8 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3058, 4006 |
| Eco24I | GRGCYC | 1 cut(s) | 1561 |
| Eco31I | GGTCTC | 1 cut(s) | 4236 |
| Eco53kI | GAGCTC | 1 cut(s) | 1559 |
| Eco57I | CTGAAG | 2 cut(s) | 1730, 3450 |
| Eco88I | CYCGRG | 1 cut(s) | 121 |
| EcoICRI | GAGCTC | 1 cut(s) | 1559 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 149, 1812 |
| EcoO109I | RGGNCCY | 5 cut(s) | 24, 1010, 1169, 1378, 3055 |
| EcoRI | GAATTC | 2 cut(s) | 1633, 3916 |
| EcoRII | CCWGG | 9 cut(s) | 820, 1248, 2074, 2101, 2524, 3523, 4081, 4183, 4508 |
| EcoT14I | CCWWGG | 8 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3058, 4006 |
| EcoT22I | ATGCAT | 3 cut(s) | 524, 627, 3717 |
| EcoT38I | GRGCYC | 1 cut(s) | 1561 |
| ErhI | CCWWGG | 8 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3058, 4006 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2811, 2843, 4542, 4574 |
| FaqI | GGGAC | 5 cut(s) | 10, 971, 1063, 1391, 2597 |
| FauI | CCCGC | 1 cut(s) | 4147 |
| FauNDI | CATATG | 1 cut(s) | 1373 |
| FbaI | TGATCA | 4 cut(s) | 925, 1873, 2248, 3328 |
| FblI | GTMKAC | 1 cut(s) | 2571 |
| FriOI | GRGCYC | 1 cut(s) | 1561 |
| FspBI | CTAG | 9 cut(s) | 866, 1131, 1223, 1796, 1922, 1991, 3059, 3260, 3924 |
| GlaI | GCGC | 2 cut(s) | 3079, 3864 |
| GsaI | CCCAGC | 3 cut(s) | 3276, 3516, 4134 |
| GsuI | CTGGAG | 8 cut(s) | 2124, 3507, 3693, 3861, 4104, 4206, 4284, 4598 |
| HaeIII | GGCC | 9 cut(s) | 820, 1493, 3033, 3051, 3057, 4297, 4651, 4730, 4741 |
| HapII | CCGG | 3 cut(s) | 326, 3052, 3448 |
| HgaI | GACGC | 5 cut(s) | 893, 1653, 2084, 2475, 4781 |
| HhaI | GCGC | 2 cut(s) | 3080, 3865 |
| Hin6I | GCGC | 2 cut(s) | 3078, 3863 |
| HinP1I | GCGC | 2 cut(s) | 3078, 3863 |
| HindIII | AAGCTT | 9 cut(s) | 1283, 1319, 1406, 1478, 1752, 1862, 1908, 2453, 2477 |
| HpaII | CCGG | 3 cut(s) | 326, 3052, 3448 |
| Hpy166II | GTNNAC | 7 cut(s) | 455, 784, 1469, 2220, 2572, 2645, 2723 |
| Hpy8I | GTNNAC | 7 cut(s) | 455, 784, 1469, 2220, 2572, 2645, 2723 |
| Hpy99I | CGWCG | 1 cut(s) | 2906 |
| HpyCH4III | ACNGT | 8 cut(s) | 1888, 1945, 3125, 3254, 3565, 3973, 4312, 4747 |
| HpyCH4IV | ACGT | 4 cut(s) | 833, 3142, 3360, 3981 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 284, 817, 1848, 2560, 3431, 3434 |
| HpySE526I | ACGT | 4 cut(s) | 833, 3142, 3360, 3981 |
| HspAI | GCGC | 2 cut(s) | 3078, 3863 |
| KflI | GGGWCCC | 2 cut(s) | 24, 1378 |
| Kpn2I | TCCGGA | 1 cut(s) | 325 |
| Ksp22I | TGATCA | 4 cut(s) | 925, 1873, 2248, 3328 |
| LguI | GCTCTTC | 2 cut(s) | 2595, 2732 |
| LweI | GCATC | 5 cut(s) | 145, 238, 2936, 3286, 4698 |
| MaeI | CTAG | 9 cut(s) | 866, 1131, 1223, 1796, 1922, 1991, 3059, 3260, 3924 |
| MaeII | ACGT | 4 cut(s) | 833, 3142, 3360, 3981 |
| MaeIII | GTNAC | 9 cut(s) | 228, 640, 894, 977, 1501, 2061, 3344, 4111, 4263 |
| MfeI | CAATTG | 1 cut(s) | 3624 |
| MflI | RGATCY | 4 cut(s) | 862, 874, 2258, 3853 |
| MhlI | GDGCHC | 6 cut(s) | 833, 1561, 2222, 2392, 2607, 2647 |
| MlyI | GAGTC | 6 cut(s) | 113, 1085, 1097, 2899, 2950, 4673 |
| MmeI | TCCRAC | 3 cut(s) | 1119, 4037, 4294 |
| Mph1103I | ATGCAT | 3 cut(s) | 524, 627, 3717 |
| MroI | TCCGGA | 1 cut(s) | 325 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2455, 3651, 4062 |
| MslI | CAYNNNNRTG | 2 cut(s) | 209, 221 |
| MspA1I | CMGCKG | 5 cut(s) | 508, 2011, 3428, 3437, 4142 |
| MspCI | CTTAAG | 2 cut(s) | 1216, 1475 |
| MspI | CCGG | 3 cut(s) | 326, 3052, 3448 |
| MunI | CAATTG | 1 cut(s) | 3624 |
| Mva1269I | GAATGC | 3 cut(s) | 289, 3559, 3703 |
| MvaI | CCWGG | 9 cut(s) | 822, 1250, 2076, 2103, 2526, 3525, 4083, 4185, 4510 |
| MvnI | CGCG | 4 cut(s) | 904, 2901, 3078, 4684 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 284, 817, 1848, 2560, 3431, 3434 |
| NciI | CCSGG | 1 cut(s) | 3053 |
| NcoI | CCATGG | 2 cut(s) | 633, 2960 |
| NdeI | CATATG | 1 cut(s) | 1373 |
| NmeAIII | GCCGAG | 1 cut(s) | 390 |
| NmuCI | GTSAC | 6 cut(s) | 894, 977, 2061, 3344, 4111, 4263 |
| NsiI | ATGCAT | 3 cut(s) | 524, 627, 3717 |
| NspI | RCATGY | 9 cut(s) | 220, 1345, 1390, 2383, 2554, 2578, 2818, 3801, 4420 |
| PaeI | GCATGC | 1 cut(s) | 2818 |
| PagI | TCATGA | 3 cut(s) | 1876, 2508, 3331 |
| PciI | ACATGT | 3 cut(s) | 216, 2379, 2574 |
| PciSI | GCTCTTC | 2 cut(s) | 2595, 2732 |
| PctI | GAATGC | 3 cut(s) | 289, 3559, 3703 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2455, 3651, 4062 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1553 |
| PfoI | TCCNGGA | 3 cut(s) | 2101, 2524, 4081 |
| PleI | GAGTC | 6 cut(s) | 113, 1084, 1096, 2898, 2950, 4673 |
| PpsI | GAGTC | 6 cut(s) | 113, 1084, 1096, 2898, 2950, 4673 |
| Ppu21I | YACGTR | 1 cut(s) | 834 |
| PpuMI | RGGWCCY | 4 cut(s) | 24, 1010, 1169, 1378 |
| PscI | ACATGT | 3 cut(s) | 216, 2379, 2574 |
| PsiI | TTATAA | 2 cut(s) | 1835, 1959 |
| Psp124BI | GAGCTC | 1 cut(s) | 1561 |
| Psp5II | RGGWCCY | 4 cut(s) | 24, 1010, 1169, 1378 |
| Psp6I | CCWGG | 9 cut(s) | 820, 1248, 2074, 2101, 2524, 3523, 4081, 4183, 4508 |
| PspFI | CCCAGC | 3 cut(s) | 3272, 3512, 4130 |
| PspGI | CCWGG | 9 cut(s) | 820, 1248, 2074, 2101, 2524, 3523, 4081, 4183, 4508 |
| PspPPI | RGGWCCY | 4 cut(s) | 24, 1010, 1169, 1378 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3127, 3159 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1013, 1046, 3971 |
| PsuI | RGATCY | 4 cut(s) | 862, 874, 2258, 3853 |
| PvuII | CAGCTG | 2 cut(s) | 3428, 3437 |
| RsaI | GTAC | 7 cut(s) | 605, 836, 2038, 2992, 3894, 4507, 4812 |
| RsaNI | GTAC | 7 cut(s) | 604, 835, 2037, 2991, 3893, 4506, 4811 |
| RseI | CAYNNNNRTG | 2 cut(s) | 209, 221 |
| SacI | GAGCTC | 1 cut(s) | 1561 |
| SapI | GCTCTTC | 2 cut(s) | 2595, 2732 |
| SchI | GAGTC | 6 cut(s) | 113, 1085, 1097, 2899, 2950, 4673 |
| SduI | GDGCHC | 6 cut(s) | 833, 1561, 2222, 2392, 2607, 2647 |
| SfaNI | GCATC | 5 cut(s) | 145, 238, 2936, 3286, 4698 |
| SfcI | CTRYAG | 3 cut(s) | 1694, 2948, 4284 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 209, 221 |
| SmlI | CTYRAG | 5 cut(s) | 1153, 1216, 1475, 1812, 2369 |
| SmoI | CTYRAG | 5 cut(s) | 1153, 1216, 1475, 1812, 2369 |
| SphI | GCATGC | 1 cut(s) | 2818 |
| SsiI | CCGC | 7 cut(s) | 251, 506, 845, 2011, 2899, 4140, 4684 |
| SspI | AATATT | 3 cut(s) | 1066, 2197, 3010 |
| SspMI | CTAG | 9 cut(s) | 866, 1131, 1223, 1796, 1922, 1991, 3059, 3260, 3924 |
| SstI | GAGCTC | 1 cut(s) | 1561 |
| StyI | CCWWGG | 8 cut(s) | 233, 633, 2057, 2709, 2960, 3034, 3058, 4006 |
| TaaI | ACNGT | 8 cut(s) | 1888, 1945, 3125, 3254, 3565, 3973, 4312, 4747 |
| TaiI | ACGT | 4 cut(s) | 836, 3145, 3363, 3984 |
| TaqI | TCGA | 7 cut(s) | 409, 1231, 1275, 1631, 1744, 2937, 4431 |
| TatI | WGTACW | 2 cut(s) | 2990, 3892 |
| TauI | GCSGC | 1 cut(s) | 848 |
| TscAI | CASTG | 8 cut(s) | 228, 1654, 1950, 3114, 3223, 3259, 4281, 4443 |
| TseFI | GTSAC | 6 cut(s) | 894, 977, 2061, 3344, 4111, 4263 |
| Tsp45I | GTSAC | 6 cut(s) | 894, 977, 2061, 3344, 4111, 4263 |
| TspGWI | ACGGA | 5 cut(s) | 221, 659, 2024, 2579, 4504 |
| TspRI | CASTG | 8 cut(s) | 228, 1654, 1950, 3114, 3223, 3259, 4281, 4443 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1553 |
| Vha464I | CTTAAG | 2 cut(s) | 1216, 1475 |
| VneI | GTGCAC | 2 cut(s) | 2218, 2643 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 149, 1812 |
| XbaI | TCTAGA | 2 cut(s) | 865, 3259 |
| XceI | RCATGY | 9 cut(s) | 220, 1345, 1390, 2383, 2554, 2578, 2818, 3801, 4420 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1755 |
| XmaJI | CCTAGG | 1 cut(s) | 3058 |
| XmiI | GTMKAC | 1 cut(s) | 2571 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2455, 3651, 4062 |
| XspI | CTAG | 9 cut(s) | 866, 1131, 1223, 1796, 1922, 1991, 3059, 3260, 3924 |
| Zsp2I | ATGCAT | 3 cut(s) | 524, 627, 3717 |