protein localization to endoplasmic reticulum exit site
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20450 |
| fragaria_vesca | FvH4_3g23110 |
| malus_domestica | MD00G1159100.v1.1 MD03G1197900.v1.1 MD11G1213800.v1.1 |
| prunus_persica | Prupe.4G217500_v2.0.a1 |
| pyrus_communis | pycom03g14940 pycom11g18840 |
| rosa_chinensis | RchiOBHm_Chr5g0040711 RchiOBHm_Chr5g0040761 |
| rosa_laevigata | RLG00000033998 |
| rosa_multiflora | Rmu_co8328431.1_g000001 Rmu_sc0002719.1_g000002 Rmu_sc0002719.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00039930 Rroxscaffold_1G00039950 Rroxscaffold_1G00039960 |
| rosa_rugosa | Rorug05G0187000 |
| rosa_samantha | Rh5AG272800 Rh5BG277800 Rh5BG277900 Rh5CG309900 Rh5DG285700 Rh5DG285800 |
| rosa_wichuraiana | Rw5G025590 Rw5G025630 Rw5G025650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 171, 184 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| AluBI | AGCT | 1 cut(s) | 91 |
| AluI | AGCT | 1 cut(s) | 91 |
| Alw21I | GWGCWC | 1 cut(s) | 93 |
| AlwI | GGATC | 2 cut(s) | 171, 184 |
| ApeKI | GCWGC | 1 cut(s) | 70 |
| BamHI | GGATCC | 1 cut(s) | 176 |
| BanII | GRGCYC | 1 cut(s) | 93 |
| Bbv12I | GWGCWC | 1 cut(s) | 93 |
| BbvI | GCAGC | 1 cut(s) | 57 |
| BisI | GCNGC | 1 cut(s) | 71 |
| BlsI | GCNGC | 1 cut(s) | 72 |
| BmiI | GGNNCC | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 32 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| Bse3DI | GCAATG | 1 cut(s) | 145 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| BseMI | GCAATG | 1 cut(s) | 145 |
| BseXI | GCAGC | 1 cut(s) | 57 |
| BsiHKAI | GWGCWC | 1 cut(s) | 93 |
| BslFI | GGGAC | 1 cut(s) | 203 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| BsmFI | GGGAC | 1 cut(s) | 203 |
| BsmI | GAATGC | 1 cut(s) | 140 |
| Bsp1286I | GDGCHC | 1 cut(s) | 93 |
| Bsp143I | GATC | 2 cut(s) | 153, 176 |
| BspLI | GGNNCC | 1 cut(s) | 178 |
| BspPI | GGATC | 2 cut(s) | 171, 184 |
| BsrDI | GCAATG | 1 cut(s) | 145 |
| BssMI | GATC | 2 cut(s) | 153, 176 |
| Bst4CI | ACNGT | 1 cut(s) | 11 |
| BstDEI | CTNAG | 1 cut(s) | 101 |
| BstKTI | GATC | 2 cut(s) | 156, 179 |
| BstMBI | GATC | 2 cut(s) | 153, 176 |
| BstV1I | GCAGC | 1 cut(s) | 57 |
| BstX2I | RGATCY | 1 cut(s) | 176 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 49 |
| BstYI | RGATCY | 1 cut(s) | 176 |
| BtsIMutI | CAGTG | 1 cut(s) | 53 |
| CviJI | RGCY | 2 cut(s) | 70, 91 |
| CviKI_1 | RGCY | 2 cut(s) | 70, 91 |
| DdeI | CTNAG | 1 cut(s) | 101 |
| DpnI | GATC | 2 cut(s) | 155, 178 |
| DpnII | GATC | 2 cut(s) | 153, 176 |
| Ecl136II | GAGCTC | 1 cut(s) | 91 |
| Eco24I | GRGCYC | 1 cut(s) | 93 |
| Eco53kI | GAGCTC | 1 cut(s) | 91 |
| EcoICRI | GAGCTC | 1 cut(s) | 91 |
| EcoT38I | GRGCYC | 1 cut(s) | 93 |
| FaiI | YATR | 7 cut(s) | 7, 32, 44, 81, 147, 167, 223 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 12, 44 |
| FaqI | GGGAC | 1 cut(s) | 203 |
| Fnu4HI | GCNGC | 1 cut(s) | 71 |
| FriOI | GRGCYC | 1 cut(s) | 93 |
| Fsp4HI | GCNGC | 1 cut(s) | 71 |
| GluI | GCNGC | 1 cut(s) | 71 |
| HinfI | GANTC | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 1 cut(s) | 157 |
| HpyCH4III | ACNGT | 1 cut(s) | 11 |
| HpyCH4V | TGCA | 2 cut(s) | 73, 138 |
| HpyF3I | CTNAG | 1 cut(s) | 101 |
| Kzo9I | GATC | 2 cut(s) | 153, 176 |
| LmnI | GCTCC | 1 cut(s) | 88 |
| LpnPI | CCDG | 4 cut(s) | 97, 142, 158, 194 |
| Lsp1109I | GCAGC | 1 cut(s) | 57 |
| LweI | GCATC | 1 cut(s) | 32 |
| MalI | GATC | 2 cut(s) | 155, 178 |
| MboI | GATC | 2 cut(s) | 153, 176 |
| MflI | RGATCY | 1 cut(s) | 176 |
| MhlI | GDGCHC | 1 cut(s) | 93 |
| MluCI | AATT | 1 cut(s) | 106 |
| MlyI | GAGTC | 1 cut(s) | 205 |
| Mva1269I | GAATGC | 1 cut(s) | 140 |
| NdeII | GATC | 2 cut(s) | 153, 176 |
| NlaIV | GGNNCC | 1 cut(s) | 178 |
| PctI | GAATGC | 1 cut(s) | 140 |
| PflFI | GACNNNGTC | 1 cut(s) | 202 |
| PkrI | GCNGC | 1 cut(s) | 72 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| Psp124BI | GAGCTC | 1 cut(s) | 93 |
| PspN4I | GGNNCC | 1 cut(s) | 178 |
| PsuI | RGATCY | 1 cut(s) | 176 |
| PsyI | GACNNNGTC | 1 cut(s) | 202 |
| SacI | GAGCTC | 1 cut(s) | 93 |
| SatI | GCNGC | 1 cut(s) | 71 |
| Sau3AI | GATC | 2 cut(s) | 153, 176 |
| SchI | GAGTC | 1 cut(s) | 205 |
| SduI | GDGCHC | 1 cut(s) | 93 |
| SetI | ASST | 1 cut(s) | 93 |
| SfaNI | GCATC | 1 cut(s) | 32 |
| SgeI | CNNG | 8 cut(s) | 61, 97, 124, 163, 169, 185, 193, 220 |
| Sse9I | AATT | 1 cut(s) | 106 |
| SstI | GAGCTC | 1 cut(s) | 93 |
| TaaI | ACNGT | 1 cut(s) | 11 |
| TaqI | TCGA | 1 cut(s) | 97 |
| TasI | AATT | 1 cut(s) | 106 |
| TscAI | CASTG | 1 cut(s) | 60 |
| TseI | GCWGC | 1 cut(s) | 70 |
| TspRI | CASTG | 1 cut(s) | 60 |
| Tth111I | GACNNNGTC | 1 cut(s) | 202 |