Rh5DG285700

protein localization to endoplasmic reticulum exit site

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
35415596 .. 35416367
772 bp
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UTR
Exon/CDS
Intron
Rh5DG285700.1

Sequence Viewer

Length: 387 bp
ATGGGATTGGATCGTTCGAAGCAGGGACGAGGGCCATTGGTGGTGAAGAGTGTGGGAGGAACCATTCTCGTCTTCTTTAGCTCTACCATATACAGTGTGTTCAGTGTTCAGAAGAAACGCTCAATTGATGCAGGCTTTGTTAATCCAACTGATGAGGTTCTTATGGCATCCCGTCTATTAGAAGCATCTCTTATAGGGTTTTCCCTATTCTTGGCACTGATGATAGATAGGCTGCATTACTATATCAAGGAGATCTATCGGCTTAGAAATTACAGGGAAGAAGAACTGAAAAAGGAATGCAATGAGCATAGCAAGATCAGGAAAAGCATAATGCAGGGATCCCAGAGTTGGGACGAACAGACATTGTCCAAGACTCCAAAGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.65

Weight (kDa)

9.55

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 18, 333, 346
AfiI CCNNNNNNNGG 3 cut(s) 211, 348, 349
AluBI AGCT 1 cut(s) 81
AluI AGCT 1 cut(s) 81
AlwI GGATC 3 cut(s) 18, 333, 346
AoxI GGCC 1 cut(s) 32
ApeKI GCWGC 1 cut(s) 232
AspS9I GGNCC 1 cut(s) 32
AsuHPI GGTGA 1 cut(s) 55
AsuII TTCGAA 1 cut(s) 17
BamHI GGATCC 1 cut(s) 338
BbsI GAAGAC 1 cut(s) 64
BbvI GCAGC 1 cut(s) 219
BglII AGATCT 1 cut(s) 252
BisI GCNGC 1 cut(s) 233
BlsI GCNGC 1 cut(s) 234
BmgT120I GGNCC 1 cut(s) 32
BmiI GGNNCC 2 cut(s) 61, 340
BmsI GCATC 3 cut(s) 118, 176, 194
BpiI GAAGAC 1 cut(s) 64
Bpu14I TTCGAA 1 cut(s) 17
Bsc4I CCNNNNNNNGG 3 cut(s) 211, 348, 349
Bse3DI GCAATG 1 cut(s) 307
BseGI GGATG 1 cut(s) 167
BseLI CCNNNNNNNGG 3 cut(s) 211, 348, 349
BseMI GCAATG 1 cut(s) 307
BseXI GCAGC 1 cut(s) 219
BshFI GGCC 1 cut(s) 34
BslFI GGGAC 2 cut(s) 39, 365
BslI CCNNNNNNNGG 3 cut(s) 211, 348, 349
BsmFI GGGAC 2 cut(s) 39, 365
BsmI GAATGC 1 cut(s) 302
BsnI GGCC 1 cut(s) 34
Bsp119I TTCGAA 1 cut(s) 17
Bsp143I GATC 4 cut(s) 10, 252, 315, 338
BspANI GGCC 1 cut(s) 34
BspLI GGNNCC 2 cut(s) 61, 340
BspPI GGATC 3 cut(s) 18, 333, 346
BspT104I TTCGAA 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 307
BssMI GATC 4 cut(s) 10, 252, 315, 338
Bst4CI ACNGT 1 cut(s) 95
Bst6I CTCTTC 1 cut(s) 41
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 133
BstDEI CTNAG 1 cut(s) 263
BstF5I GGATG 1 cut(s) 167
BstKTI GATC 4 cut(s) 13, 255, 318, 341
BstMBI GATC 4 cut(s) 10, 252, 315, 338
BstV1I GCAGC 1 cut(s) 219
BstV2I GAAGAC 1 cut(s) 64
BstX2I RGATCY 2 cut(s) 252, 338
BstYI RGATCY 2 cut(s) 252, 338
BsuRI GGCC 1 cut(s) 34
BtsCI GGATG 1 cut(s) 167
BtsIMutI CAGTG 3 cut(s) 100, 109, 215
Cac8I GCNNGC 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 32
CviJI RGCY 5 cut(s) 34, 81, 135, 232, 262
CviKI_1 RGCY 5 cut(s) 34, 81, 135, 232, 262
DdeI CTNAG 1 cut(s) 263
DpnI GATC 4 cut(s) 12, 254, 317, 340
DpnII GATC 4 cut(s) 10, 252, 315, 338
Eam1104I CTCTTC 1 cut(s) 41
EarI CTCTTC 1 cut(s) 41
FaiI YATR 8 cut(s) 89, 91, 164, 194, 243, 309, 329, 385
FalI AAGNNNNNCTT 2 cut(s) 174, 206
FaqI GGGAC 2 cut(s) 39, 365
Fnu4HI GCNGC 1 cut(s) 233
FokI GGATG 1 cut(s) 154
Fsp4HI GCNGC 1 cut(s) 233
GluI GCNGC 1 cut(s) 233
HaeIII GGCC 1 cut(s) 34
HinfI GANTC 1 cut(s) 373
HphI GGTGA 1 cut(s) 55
Hpy188I TCNGA 1 cut(s) 111
Hpy188III TCNNGA 1 cut(s) 319
HpyCH4III ACNGT 1 cut(s) 95
HpyCH4V TGCA 4 cut(s) 131, 235, 300, 334
HpyF3I CTNAG 1 cut(s) 263
Kzo9I GATC 4 cut(s) 10, 252, 315, 338
LpnPI CCDG 6 cut(s) 8, 117, 259, 304, 320, 356
Lsp1109I GCAGC 1 cut(s) 219
LweI GCATC 3 cut(s) 118, 176, 194
MalI GATC 4 cut(s) 12, 254, 317, 340
MboI GATC 4 cut(s) 10, 252, 315, 338
MboII GAAGA 5 cut(s) 58, 64, 124, 290, 293
MfeI CAATTG 1 cut(s) 123
MflI RGATCY 2 cut(s) 252, 338
MluCI AATT 2 cut(s) 123, 268
MlyI GAGTC 1 cut(s) 367
MmeI TCCRAC 1 cut(s) 170
MnlI CCTC 3 cut(s) 23, 50, 148
MseI TTAA 1 cut(s) 141
MunI CAATTG 1 cut(s) 123
Mva1269I GAATGC 1 cut(s) 302
NdeII GATC 4 cut(s) 10, 252, 315, 338
NlaIV GGNNCC 2 cut(s) 61, 340
NspV TTCGAA 1 cut(s) 17
PctI GAATGC 1 cut(s) 302
PflFI GACNNNGTC 1 cut(s) 364
PkrI GCNGC 1 cut(s) 234
PleI GAGTC 1 cut(s) 367
PpsI GAGTC 1 cut(s) 367
PspN4I GGNNCC 2 cut(s) 61, 340
PspPI GGNCC 1 cut(s) 32
PsuI RGATCY 2 cut(s) 252, 338
PsyI GACNNNGTC 1 cut(s) 364
SaqAI TTAA 1 cut(s) 141
SatI GCNGC 1 cut(s) 233
Sau3AI GATC 4 cut(s) 10, 252, 315, 338
Sau96I GGNCC 1 cut(s) 32
SchI GAGTC 1 cut(s) 367
SetI ASST 2 cut(s) 83, 159
SfaNI GCATC 3 cut(s) 118, 176, 194
SfuI TTCGAA 1 cut(s) 17
Sse9I AATT 2 cut(s) 123, 268
TaaI ACNGT 1 cut(s) 95
TaqI TCGA 1 cut(s) 17
TasI AATT 2 cut(s) 123, 268
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
TscAI CASTG 3 cut(s) 100, 109, 222
TseI GCWGC 1 cut(s) 232
TspRI CASTG 3 cut(s) 100, 109, 222
Tth111I GACNNNGTC 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.