Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001074.1

Orthogroup ID

OG0003822

Physical Location & Seq

Genomic Coordinates Forward (+)

5161 .. 7606

Gene Structure 2446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001074.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

atgtacgttcccaccactccatgcgctcctgacctccgatcgctcctcctccgatcaccgccgcagatctctgatccatcctcaggtaaccaaccaccccccagatctgtctacgtccacaaaccccccgtttctctgacgctttcgtttcttcacaggcaggaggtgttcggggatctgtgcccaatggaatccacgactccgagcccttgtaagatcaccctcaagctcataagagacgacgaacaagaacaagagccgaaaacgaacgaggacaaacccgcccagtctccttcgtcttcctccgtctcgtcgccgccgtcttccccttcctcctccgacgagattctccagtcccatctccaatcccaggagctcgtgctctacgatcccgccgtcgccgctaacgccggtggtggcgccaatcgcgcggctacagggaatcggattccgaatctgaacaaatccatttctccggtctcggtttcgaatagtcaaggtcctagggttttgccgtcggtcggggccttcactgtgcagtgcgccaattgcttcaagtggaggctgattccgacgaaggagcagtacgagcaaatccgggagcacattctggaacggccgttctactgtgagactgcaaaggaatggcggccgtcgatttcgtgtgatgatccggctgatattactcaagacgggagccggctctgggccattgataggcccaacattgctcagccaccgcccggctggcaacggctactcaggattcgaggtgaaggaagcaccaagtttgcagatgtttattatcaagcgccgtcgggcaagagacttcggtccatggtggaggttcaaaagtatttgattgaacatcctgagtatatggtggatgggctatctatggcacaattttcatttcaaattccaaggcctctgcaggagaattatgtgaggaaacgccctgctgctcctcgtttgacagctgctgctcatgccagtagaactcttgaacctactgaagcaaatccgttagcatgggctggtccagatgatacagagttgcaacttggttctccgtacttggaagcacatgtgtttgaccctgttggtcgacctacaaagaagcgagccaaaacaagaactccatcaagggtctacaatagtaatttaaatatcagcacagagtcgagctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008327 GO:0019899 GO:0036094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD zf-CW

Protein Analysis

396

Amino Acids

43.86

Weight (kDa)

8.1

Isoelectric Point (pI)

71.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35330 AT5G35330 AT5G35330 AT5G35330
fragaria_vesca	FvH4_4g06240 FvH4_4g06240 FvH4_4g06240 FvH4_4g06240 FvH4_4g06240
malus_domestica	MD13G1234700.v1.1 MD16G1239500.v1.1
prunus_persica	Prupe.1G065600_v2.0.a1 Prupe.1G065600_v2.0.a1
pyrus_communis	pycom16g20040
rosa_chinensis	RchiOBHm_Chr4g0397961
rosa_laevigata	RLG00000009392
rosa_multiflora	Rmu_co8227835.1_g000001 Rmu_co8419633.1_g000001 Rmu_sc0001074.1_g000002 Rmu_sc0001074.1_g000005 Rmu_sc0003773.1_g000027
rosa_roxburghii	Rroxscaffold_5G00342870 Rroxscaffold_5G00342930
rosa_rugosa	Rorug04G0004900 Rorug04G0005000
rosa_samantha	Rh4AG081200 Rh4AG081600 Rh4BG079200 Rh4CG088800 Rh4CG089100 Rh4DG074700
rosa_wichuraiana	Rw0G019360 Rw4G006770 Rw4G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	419
AccI	GTMKAC	3 cut(s)	111, 1108, 1152
AccII	CGCG	2 cut(s)	429, 431
AciI	CCGC	9 cut(s)	59, 62, 282, 317, 393, 402, 431, 649, 740
AclWI	GGATC	4 cut(s)	68, 183, 383, 665
AcoI	YGGCCR	2 cut(s)	617, 650
AcsI	RAATTY	1 cut(s)	918
AcuI	CTGAAG	1 cut(s)	1035
AcyI	GRCGYC	1 cut(s)	420
AfaI	GTAC	3 cut(s)	5, 587, 1076
AfiI	CCNNNNNNNGG	6 cut(s)	83, 370, 521, 706, 717, 743
AflIII	ACRYGT	1 cut(s)	1087
AgsI	TTSAA	5 cut(s)	556, 851, 866, 917, 1007
AjnI	CCWGG	1 cut(s)	369
AloI	GAACNNNNNNTCC	2 cut(s)	605, 637
AluBI	AGCT	4 cut(s)	229, 376, 980, 1188
AluI	AGCT	4 cut(s)	229, 376, 980, 1188
Alw21I	GWGCWC	3 cut(s)	378, 384, 606
Alw26I	GTCTC	6 cut(s)	231, 294, 313, 484, 626, 820
AlwI	GGATC	4 cut(s)	68, 183, 383, 665
AlwNI	CAGNNNCTG	1 cut(s)	983
AoxI	GGCC	6 cut(s)	525, 617, 650, 708, 719, 926
ApeKI	GCWGC	3 cut(s)	962, 980, 983
ApoI	RAATTY	1 cut(s)	918
AspA2I	CCTAGG	1 cut(s)	503
AspLEI	GCGC	5 cut(s)	26, 422, 431, 545, 814
AspS9I	GGNCC	6 cut(s)	500, 525, 708, 720, 834, 1040
AsuC2I	CCSGG	2 cut(s)	599, 744
AsuHPI	GGTGA	3 cut(s)	48, 211, 785
AsuII	TTCGAA	1 cut(s)	488
AvaII	GGWCC	3 cut(s)	500, 834, 1040
AvrII	CCTAGG	1 cut(s)	503
AxyI	CCTNAGG	1 cut(s)	82
BaeGI	GKGCMC	1 cut(s)	185
BanI	GGYRCC	1 cut(s)	419
BanII	GRGCYC	2 cut(s)	209, 378
BarI	GAAGNNNNNNTAC	2 cut(s)	569, 601
BauI	CACGAG	1 cut(s)	377
BbsI	GAAGAC	2 cut(s)	291, 315
Bbv12I	GWGCWC	3 cut(s)	378, 384, 606
BbvI	GCAGC	3 cut(s)	949, 967, 970
BccI	CCATC	4 cut(s)	85, 366, 881, 1150
BceAI	ACGGC	8 cut(s)	304, 380, 499, 604, 632, 637, 770, 799
BciT130I	CCWGG	1 cut(s)	371
BcnI	CCSGG	2 cut(s)	599, 744
BcoDI	GTCTC	6 cut(s)	231, 294, 313, 484, 626, 820
BfaI	CTAG	2 cut(s)	504, 1189
BfmI	CTRYAG	2 cut(s)	435, 932
BfoI	RGCGCY	2 cut(s)	423, 815
BglI	GCCNNNNNGGC	1 cut(s)	748
BglII	AGATCT	2 cut(s)	66, 104
BisI	GCNGC	8 cut(s)	62, 317, 402, 432, 650, 963, 981, 984
BlnI	CCTAGG	1 cut(s)	503
BlpI	GCTNAGC	1 cut(s)	732
BlsI	GCNGC	8 cut(s)	63, 318, 403, 433, 651, 964, 982, 985
Bme1390I	CCNGG	3 cut(s)	371, 599, 744
Bme18I	GGWCC	3 cut(s)	500, 834, 1040
BmgT120I	GGNCC	6 cut(s)	500, 525, 708, 720, 834, 1040
BmiI	GGNNCC	3 cut(s)	421, 526, 698
BmrFI	CCNGG	3 cut(s)	371, 599, 744
BmrI	ACTGGG	1 cut(s)	280
BmuI	ACTGGG	1 cut(s)	280
BoxI	GACNNNNGTC	1 cut(s)	832
BpiI	GAAGAC	2 cut(s)	291, 315
BpmI	CTGGAG	1 cut(s)	335
Bpu1102I	GCTNAGC	1 cut(s)	732
Bpu14I	TTCGAA	1 cut(s)	488
BpuEI	CTTGAG	2 cut(s)	209, 672
BpuMI	CCSGG	2 cut(s)	599, 744
BsaHI	GRCGYC	1 cut(s)	420
BsaI	GGTCTC	1 cut(s)	484
BsaJI	CCNNGG	4 cut(s)	369, 503, 837, 923
BsaWI	WCCGGW	1 cut(s)	475
BsaXI	ACNNNNNCTCC	2 cut(s)	1123, 1153
Bsc4I	CCNNNNNNNGG	6 cut(s)	83, 370, 521, 706, 717, 743
Bse118I	RCCGGY	2 cut(s)	410, 699
Bse1I	ACTGG	3 cut(s)	286, 352, 993
Bse21I	CCTNAGG	1 cut(s)	82
Bse3DI	GCAATG	1 cut(s)	726
BseBI	CCWGG	1 cut(s)	371
BseDI	CCNNGG	4 cut(s)	369, 503, 837, 923
BseGI	GGATG	3 cut(s)	77, 868, 892
BseLI	CCNNNNNNNGG	6 cut(s)	83, 370, 521, 706, 717, 743
BseMI	GCAATG	1 cut(s)	726
BseMII	CTCAG	4 cut(s)	96, 746, 775, 864
BseNI	ACTGG	3 cut(s)	286, 352, 993
BseRI	GAGGAG	4 cut(s)	35, 38, 325, 957
BseSI	GKGCMC	1 cut(s)	185
BseX3I	CGGCCG	2 cut(s)	617, 650
BseXI	GCAGC	3 cut(s)	949, 967, 970
BsgI	GTGCAG	1 cut(s)	557
Bsh1236I	CGCG	2 cut(s)	429, 431
Bsh1285I	CGRYCG	4 cut(s)	41, 522, 620, 653
BshFI	GGCC	6 cut(s)	527, 619, 652, 710, 721, 928
BshNI	GGYRCC	1 cut(s)	419
BsiEI	CGRYCG	4 cut(s)	41, 522, 620, 653
BsiHKAI	GWGCWC	3 cut(s)	378, 384, 606
BsiSI	CCGG	6 cut(s)	411, 476, 598, 674, 700, 744
BslFI	GGGAC	1 cut(s)	340
BslI	CCNNNNNNNGG	6 cut(s)	83, 370, 521, 706, 717, 743
BsmAI	GTCTC	6 cut(s)	231, 294, 313, 484, 626, 820
BsmBI	CGTCTC	2 cut(s)	231, 313
BsmFI	GGGAC	1 cut(s)	340
BsnI	GGCC	6 cut(s)	527, 619, 652, 710, 721, 928
Bso31I	GGTCTC	1 cut(s)	484
Bsp119I	TTCGAA	1 cut(s)	488
Bsp1286I	GDGCHC	5 cut(s)	185, 209, 378, 384, 606
Bsp143I	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
Bsp1720I	GCTNAGC	1 cut(s)	732
Bsp19I	CCATGG	1 cut(s)	837
BspACI	CCGC	9 cut(s)	59, 62, 282, 317, 393, 402, 431, 649, 740
BspANI	GGCC	6 cut(s)	527, 619, 652, 710, 721, 928
BspCNI	CTCAG	4 cut(s)	95, 745, 774, 865
BspFNI	CGCG	2 cut(s)	429, 431
BspLI	GGNNCC	3 cut(s)	421, 526, 698
BspMAI	CTGCAG	1 cut(s)	936
BspPI	GGATC	4 cut(s)	68, 183, 383, 665
BspT104I	TTCGAA	1 cut(s)	488
BspT107I	GGYRCC	1 cut(s)	419
BspTNI	GGTCTC	1 cut(s)	484
BsrDI	GCAATG	1 cut(s)	726
BsrFI	RCCGGY	2 cut(s)	410, 699
BsrI	ACTGG	3 cut(s)	286, 352, 993
BssAI	RCCGGY	2 cut(s)	410, 699
BssECI	CCNNGG	4 cut(s)	369, 503, 837, 923
BssMI	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
BssNI	GRCGYC	1 cut(s)	420
BssSI	CACGAG	1 cut(s)	377
BssT1I	CCWWGG	3 cut(s)	503, 837, 923
Bst2BI	CACGAG	1 cut(s)	377
Bst2UI	CCWGG	1 cut(s)	371
Bst4CI	ACNGT	2 cut(s)	535, 629
BstACI	GRCGYC	1 cut(s)	420
BstBI	TTCGAA	1 cut(s)	488
BstC8I	GCNNGC	3 cut(s)	701, 749, 1125
BstDEI	CTNAG	4 cut(s)	82, 732, 761, 873
BstDSI	CCRYGG	1 cut(s)	837
BstEII	GGTNACC	1 cut(s)	86
BstF5I	GGATG	3 cut(s)	77, 868, 892
BstFNI	CGCG	2 cut(s)	429, 431
BstH2I	RGCGCY	2 cut(s)	423, 815
BstHHI	GCGC	5 cut(s)	26, 422, 431, 545, 814
BstKTI	GATC	9 cut(s)	41, 56, 69, 76, 107, 178, 219, 391, 673
BstMAI	GTCTC	6 cut(s)	231, 294, 313, 484, 626, 820
BstMBI	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
BstMCI	CGRYCG	4 cut(s)	41, 522, 620, 653
BstMWI	GCNNNNNNNGC	8 cut(s)	401, 407, 426, 428, 549, 589, 748, 989
BstNI	CCWGG	1 cut(s)	371
BstNSI	RCATGY	1 cut(s)	1091
BstPAI	GACNNNNGTC	1 cut(s)	832
BstPI	GGTNACC	1 cut(s)	86
BstSCI	CCNGG	3 cut(s)	369, 597, 742
BstSFI	CTRYAG	2 cut(s)	435, 932
BstSLI	GKGCMC	1 cut(s)	185
BstUI	CGCG	2 cut(s)	429, 431
BstV1I	GCAGC	3 cut(s)	949, 967, 970
BstV2I	GAAGAC	2 cut(s)	291, 315
BstX2I	RGATCY	3 cut(s)	66, 104, 175
BstYI	RGATCY	3 cut(s)	66, 104, 175
BstZI	CGGCCG	2 cut(s)	617, 650
Bsu36I	CCTNAGG	1 cut(s)	82
BsuRI	GGCC	6 cut(s)	527, 619, 652, 710, 721, 928
BtgI	CCRYGG	1 cut(s)	837
BtsCI	GGATG	3 cut(s)	77, 868, 892
BtsI	GCAGTG	1 cut(s)	545
BtsIMutI	CAGTG	2 cut(s)	531, 545
Cac8I	GCNNGC	3 cut(s)	701, 749, 1125
CaiI	CAGNNNCTG	1 cut(s)	983
CfoI	GCGC	5 cut(s)	26, 422, 431, 545, 814
Cfr10I	RCCGGY	2 cut(s)	410, 699
Cfr13I	GGNCC	6 cut(s)	500, 525, 708, 720, 834, 1040
CseI	GACGC	1 cut(s)	148
Csp6I	GTAC	3 cut(s)	4, 586, 1075
CviAII	CATG	5 cut(s)	21, 838, 989, 1032, 1088
CviQI	GTAC	3 cut(s)	4, 586, 1075
DdeI	CTNAG	4 cut(s)	82, 732, 761, 873
DinI	GGCGCC	1 cut(s)	421
DpnI	GATC	9 cut(s)	40, 55, 68, 75, 106, 177, 218, 390, 672
DpnII	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
DraI	TTTAAA	1 cut(s)	1167
EaeI	YGGCCR	2 cut(s)	617, 650
EagI	CGGCCG	2 cut(s)	617, 650
Ecl136II	GAGCTC	1 cut(s)	376
EclXI	CGGCCG	2 cut(s)	617, 650
Eco130I	CCWWGG	3 cut(s)	503, 837, 923
Eco147I	AGGCCT	1 cut(s)	928
Eco24I	GRGCYC	2 cut(s)	209, 378
Eco31I	GGTCTC	1 cut(s)	484
Eco47I	GGWCC	3 cut(s)	500, 834, 1040
Eco52I	CGGCCG	2 cut(s)	617, 650
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	1 cut(s)	1035
Eco81I	CCTNAGG	1 cut(s)	82
Eco91I	GGTNACC	1 cut(s)	86
EcoICRI	GAGCTC	1 cut(s)	376
EcoO109I	RGGNCCY	2 cut(s)	500, 525
EcoO65I	GGTNACC	1 cut(s)	86
EcoRII	CCWGG	1 cut(s)	369
EcoT14I	CCWWGG	3 cut(s)	503, 837, 923
EcoT38I	GRGCYC	2 cut(s)	209, 378
EgeI	GGCGCC	1 cut(s)	421
EheI	GGCGCC	1 cut(s)	421
ErhI	CCWWGG	3 cut(s)	503, 837, 923
Esp3I	CGTCTC	2 cut(s)	231, 313
FaeI	CATG	5 cut(s)	24, 841, 992, 1035, 1091
FaqI	GGGAC	1 cut(s)	340
FatI	CATG	5 cut(s)	20, 837, 988, 1031, 1087
FauI	CCCGC	2 cut(s)	289, 400
FblI	GTMKAC	3 cut(s)	111, 1108, 1152
Fnu4HI	GCNGC	8 cut(s)	62, 317, 402, 432, 650, 963, 981, 984
FokI	GGATG	3 cut(s)	64, 855, 899
FriOI	GRGCYC	2 cut(s)	209, 378
Fsp4HI	GCNGC	8 cut(s)	62, 317, 402, 432, 650, 963, 981, 984
FspBI	CTAG	2 cut(s)	504, 1189
GlaI	GCGC	5 cut(s)	25, 421, 430, 544, 813
GluI	GCNGC	8 cut(s)	62, 317, 402, 432, 650, 963, 981, 984
GsuI	CTGGAG	1 cut(s)	335
HaeII	RGCGCY	2 cut(s)	423, 815
HaeIII	GGCC	6 cut(s)	527, 619, 652, 710, 721, 928
HapII	CCGG	6 cut(s)	411, 476, 598, 674, 700, 744
HgaI	GACGC	1 cut(s)	148
HhaI	GCGC	5 cut(s)	26, 422, 431, 545, 814
Hin1I	GRCGYC	1 cut(s)	420
Hin1II	CATG	5 cut(s)	24, 841, 992, 1035, 1091
Hin6I	GCGC	5 cut(s)	24, 420, 429, 543, 812
HinP1I	GCGC	5 cut(s)	24, 420, 429, 543, 812
HincII	GTYRAC	1 cut(s)	1109
HindII	GTYRAC	1 cut(s)	1109
HinfI	GANTC	9 cut(s)	191, 199, 346, 442, 448, 454, 568, 766, 1181
HpaII	CCGG	6 cut(s)	411, 476, 598, 674, 700, 744
HphI	GGTGA	3 cut(s)	48, 211, 785
Hpy166II	GTNNAC	4 cut(s)	112, 118, 1109, 1153
Hpy188III	TCNNGA	7 cut(s)	29, 611, 689, 763, 872, 1004, 1043
Hpy8I	GTNNAC	4 cut(s)	112, 118, 1109, 1153
Hpy99I	CGWCG	8 cut(s)	245, 316, 344, 401, 520, 577, 658, 820
HpyAV	CCTTC	5 cut(s)	303, 339, 538, 571, 770
HpyCH4III	ACNGT	2 cut(s)	535, 629
HpyCH4IV	ACGT	2 cut(s)	6, 114
HpyCH4V	TGCA	5 cut(s)	538, 638, 794, 934, 1060
HpyF10VI	GCNNNNNNNGC	8 cut(s)	401, 407, 426, 428, 549, 589, 748, 989
HpyF3I	CTNAG	4 cut(s)	82, 732, 761, 873
HpySE526I	ACGT	2 cut(s)	6, 114
Hsp92I	GRCGYC	1 cut(s)	420
Hsp92II	CATG	5 cut(s)	24, 841, 992, 1035, 1091
HspAI	GCGC	5 cut(s)	24, 420, 429, 543, 812
KasI	GGCGCC	1 cut(s)	419
KroI	GCCGGC	1 cut(s)	699
KroNI	GCCGGC	1 cut(s)	701
Kzo9I	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
LmnI	GCTCC	7 cut(s)	31, 48, 373, 580, 601, 696, 970
Lsp1109I	GCAGC	3 cut(s)	949, 967, 970
MaeI	CTAG	2 cut(s)	504, 1189
MaeII	ACGT	2 cut(s)	6, 114
MaeIII	GTNAC	1 cut(s)	86
MalI	GATC	9 cut(s)	40, 55, 68, 75, 106, 177, 218, 390, 672
MboI	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
MboII	GAAGA	3 cut(s)	143, 291, 315
MfeI	CAATTG	1 cut(s)	547
MflI	RGATCY	3 cut(s)	66, 104, 175
MhlI	GDGCHC	5 cut(s)	185, 209, 378, 384, 606
MluCI	AATT	5 cut(s)	547, 905, 918, 940, 1162
Mly113I	GGCGCC	1 cut(s)	420
MlyI	GAGTC	2 cut(s)	193, 1190
MmeI	TCCRAC	2 cut(s)	363, 596
MroNI	GCCGGC	1 cut(s)	699
MseI	TTAA	1 cut(s)	1166
MspA1I	CMGCKG	1 cut(s)	980
MspI	CCGG	6 cut(s)	411, 476, 598, 674, 700, 744
MspR9I	CCNGG	3 cut(s)	371, 599, 744
MunI	CAATTG	1 cut(s)	547
MvaI	CCWGG	1 cut(s)	371
MvnI	CGCG	2 cut(s)	429, 431
MwoI	GCNNNNNNNGC	8 cut(s)	401, 407, 426, 428, 549, 589, 748, 989
NaeI	GCCGGC	1 cut(s)	701
NarI	GGCGCC	1 cut(s)	420
NciI	CCSGG	2 cut(s)	599, 744
NcoI	CCATGG	1 cut(s)	837
NdeII	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
NgoMIV	GCCGGC	1 cut(s)	699
NlaIII	CATG	5 cut(s)	24, 841, 992, 1035, 1091
NlaIV	GGNNCC	3 cut(s)	421, 526, 698
NspI	RCATGY	1 cut(s)	1091
NspV	TTCGAA	1 cut(s)	488
PceI	AGGCCT	1 cut(s)	928
PciI	ACATGT	1 cut(s)	1087
PcsI	WCGNNNNNNNCGW	3 cut(s)	317, 384, 393
PdiI	GCCGGC	1 cut(s)	701
PfeI	GAWTC	7 cut(s)	191, 346, 442, 448, 454, 568, 766
PfoI	TCCNGGA	1 cut(s)	597
PkrI	GCNGC	8 cut(s)	63, 318, 403, 433, 651, 964, 982, 985
Ple19I	CGATCG	1 cut(s)	41
PleI	GAGTC	2 cut(s)	193, 1189
PluTI	GGCGCC	1 cut(s)	423
PpsI	GAGTC	2 cut(s)	193, 1189
PpuMI	RGGWCCY	1 cut(s)	500
PscI	ACATGT	1 cut(s)	1087
PshAI	GACNNNNGTC	1 cut(s)	832
Psp124BI	GAGCTC	1 cut(s)	378
Psp5II	RGGWCCY	1 cut(s)	500
Psp6I	CCWGG	1 cut(s)	369
PspEI	GGTNACC	1 cut(s)	86
PspGI	CCWGG	1 cut(s)	369
PspN4I	GGNNCC	3 cut(s)	421, 526, 698
PspPI	GGNCC	6 cut(s)	500, 525, 708, 720, 834, 1040
PspPPI	RGGWCCY	1 cut(s)	500
PstI	CTGCAG	1 cut(s)	936
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	3 cut(s)	66, 104, 175
PvuI	CGATCG	1 cut(s)	41
PvuII	CAGCTG	1 cut(s)	980
RsaI	GTAC	3 cut(s)	5, 587, 1076
RsaNI	GTAC	3 cut(s)	4, 586, 1075
SacI	GAGCTC	1 cut(s)	378
SalI	GTCGAC	1 cut(s)	1107
SaqAI	TTAA	1 cut(s)	1166
SatI	GCNGC	8 cut(s)	62, 317, 402, 432, 650, 963, 981, 984
Sau3AI	GATC	9 cut(s)	38, 53, 66, 73, 104, 175, 216, 388, 670
Sau96I	GGNCC	6 cut(s)	500, 525, 708, 720, 834, 1040
SchI	GAGTC	2 cut(s)	193, 1190
ScrFI	CCNGG	3 cut(s)	371, 599, 744
SduI	GDGCHC	5 cut(s)	185, 209, 378, 384, 606
SfcI	CTRYAG	2 cut(s)	435, 932
SfoI	GGCGCC	1 cut(s)	421
SfuI	TTCGAA	1 cut(s)	488
SgrAI	CRCCGGYG	1 cut(s)	410
SinI	GGWCC	3 cut(s)	500, 834, 1040
SmiI	ATTTAAAT	1 cut(s)	1167
SmlI	CTYRAG	2 cut(s)	224, 687
SmoI	CTYRAG	2 cut(s)	224, 687
Sse9I	AATT	5 cut(s)	547, 905, 918, 940, 1162
SseBI	AGGCCT	1 cut(s)	928
SsiI	CCGC	9 cut(s)	59, 62, 282, 317, 393, 402, 431, 649, 740
SspDI	GGCGCC	1 cut(s)	419
SspMI	CTAG	2 cut(s)	504, 1189
SstI	GAGCTC	1 cut(s)	378
StuI	AGGCCT	1 cut(s)	928
StyD4I	CCNGG	3 cut(s)	369, 597, 742
StyI	CCWWGG	3 cut(s)	503, 837, 923
SwaI	ATTTAAAT	1 cut(s)	1167
TaaI	ACNGT	2 cut(s)	535, 629
TaiI	ACGT	2 cut(s)	9, 117
TaqI	TCGA	5 cut(s)	488, 656, 769, 1108, 1184
TaqII	GACCGA	2 cut(s)	508, 822
TasI	AATT	5 cut(s)	547, 905, 918, 940, 1162
TauI	GCSGC	5 cut(s)	64, 319, 404, 434, 652
TfiI	GAWTC	7 cut(s)	191, 346, 442, 448, 454, 568, 766
Tru1I	TTAA	1 cut(s)	1166
Tru9I	TTAA	1 cut(s)	1166
TscAI	CASTG	2 cut(s)	538, 545
TseI	GCWGC	3 cut(s)	962, 980, 983
TspDTI	ATGAA	1 cut(s)	900
TspGWI	ACGGA	3 cut(s)	295, 1014, 1062
TspRI	CASTG	2 cut(s)	538, 545
VpaK11BI	GGWCC	3 cut(s)	500, 834, 1040
XapI	RAATTY	1 cut(s)	918
XceI	RCATGY	1 cut(s)	1091
XcmI	CCANNNNNNNNNTGG	1 cut(s)	744
XmaJI	CCTAGG	1 cut(s)	503
XmiI	GTMKAC	3 cut(s)	111, 1108, 1152
XspI	CTAG	2 cut(s)	504, 1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.