Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0003822

Physical Location & Seq

Genomic Coordinates Reverse (-)

12109261 .. 12111767

Gene Structure 2507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00342930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGGAATCCACGTCGTCTCCGAGCCCTTGTAAGATCACCCTCAAGCTCAGAAGAGACGACGAACAAGAACAAGAGGCGAAAACGAACGACGACAAACCCGCCCAGTCTCCTTCGTCTTCCTCCGTCTCGTCGCCGCCGTCTTCCCCTTCCTCCTCCGACGAGATTCTCCAGTCCCATCTTCAATCCCAGGAGCTCGTGCTCTACGATCCCGCCGTCGCCGCTAATGCCGGTGGTGACGCCAATCGCGCTGCTACAGGGAACCGGATTCCGAATCTGAACAAATCCATTTCTCCGGTCTCGGTTTCGAATAGTCAAGGTCCTAGGGTTTTGCCATCGGTTGGGGCCTTCACTGTGCAGTGCGCCAATTGCTTCAAGTGGAGGCTGATTCCGACGAAGGAGCAGTACGAGCAAATCCGGGAGCACATTCTGGAACGGCCGTTCTACTGTGAGACTGCAAAGGAATGGCGGCCGTCGATTTCGTGTGATGATCCGGCTGACATTACTCAAGACGGGAGCCGGCTCTGGGCCATTGATAGGCCCAACATTGCTCAGCCACCGCCCGGCTGGCAACGGCTACTCAGGATTCGAGGTGAAGGAAGCACCAAGTTTGCAGATGTTTATTATCAAGCGCCGTCGGGCAAGAGACTTCGGTCCATGGTGGAGGTTCAAAAGTATTTGATTGAACATCCTGAGTATATGGTGGATGGGCTATCTATGGCACAATTTTCATTTCAAATTCCAAGGCCTCTGCAGGAGAATTATGTGAGGAAACGCCCTGCTGCTCCTCGTTTGACAGCTGCTGCTCATGCCAGTAGAACTCTTGAACCTACTGAAGCAAATCCGTTAGCATGGGCTGGTCCAGATGATACAGAGTTGCAACTTGGTTCTCCGTACTTGGAAGCACATGTGTTTGACCCTGTTGGTCGACCTACAAAGAAGCGAGCCAAAACAAGAACTCCATCAAGGGTCTACAATAGTAATTTAAATATCAGCACAGAGTCGAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008327 GO:0019899 GO:0036094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD zf-CW

Protein Analysis

335

Amino Acids

37.17

Weight (kDa)

7.63

Isoelectric Point (pI)

71.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CW	PF07496	117 - 166	3.4e-11	CW-type Zinc Finger
MBD	PF01429	186 - 246	1.3e-13	Methyl-CpG binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35330 AT5G35330 AT5G35330 AT5G35330
fragaria_vesca	FvH4_4g06240 FvH4_4g06240 FvH4_4g06240 FvH4_4g06240 FvH4_4g06240
malus_domestica	MD13G1234700.v1.1 MD16G1239500.v1.1
prunus_persica	Prupe.1G065600_v2.0.a1 Prupe.1G065600_v2.0.a1
pyrus_communis	pycom16g20040
rosa_chinensis	RchiOBHm_Chr4g0397961
rosa_laevigata	RLG00000009392
rosa_multiflora	Rmu_co8227835.1_g000001 Rmu_co8419633.1_g000001 Rmu_sc0001074.1_g000002 Rmu_sc0001074.1_g000005 Rmu_sc0003773.1_g000027
rosa_roxburghii	Rroxscaffold_5G00342870 Rroxscaffold_5G00342930
rosa_rugosa	Rorug04G0004900 Rorug04G0005000
rosa_samantha	Rh4AG081200 Rh4AG081600 Rh4BG079200 Rh4CG088800 Rh4CG089100 Rh4DG074700
rosa_wichuraiana	Rw0G019360 Rw4G006770 Rw4G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	338
AccI	GTMKAC	2 cut(s)	925, 969
AccII	CGCG	1 cut(s)	246
AciI	CCGC	6 cut(s)	99, 134, 210, 219, 466, 557
AclWI	GGATC	2 cut(s)	200, 482
AcoI	YGGCCR	2 cut(s)	434, 467
AcsI	RAATTY	1 cut(s)	735
AcuI	CTGAAG	1 cut(s)	852
AcyI	GRCGYC	1 cut(s)	237
AfaI	GTAC	2 cut(s)	404, 893
AfiI	CCNNNNNNNGG	4 cut(s)	338, 523, 534, 560
AflIII	ACRYGT	1 cut(s)	904
AgsI	TTSAA	6 cut(s)	182, 373, 668, 683, 734, 824
AjiI	CACGTC	1 cut(s)	12
AjnI	CCWGG	1 cut(s)	186
AloI	GAACNNNNNNTCC	2 cut(s)	422, 454
AluBI	AGCT	4 cut(s)	46, 193, 797, 1005
AluI	AGCT	4 cut(s)	46, 193, 797, 1005
Alw21I	GWGCWC	3 cut(s)	195, 201, 423
Alw26I	GTCTC	7 cut(s)	21, 48, 111, 130, 301, 443, 637
AlwI	GGATC	2 cut(s)	200, 482
AlwNI	CAGNNNCTG	1 cut(s)	800
AoxI	GGCC	6 cut(s)	342, 434, 467, 525, 536, 743
ApeKI	GCWGC	4 cut(s)	248, 779, 797, 800
ApoI	RAATTY	1 cut(s)	735
AspA2I	CCTAGG	1 cut(s)	320
AspLEI	GCGC	3 cut(s)	248, 362, 631
AspS9I	GGNCC	6 cut(s)	317, 342, 525, 537, 651, 857
AsuC2I	CCSGG	2 cut(s)	416, 561
AsuHPI	GGTGA	3 cut(s)	28, 245, 602
AsuII	TTCGAA	1 cut(s)	305
AvaII	GGWCC	3 cut(s)	317, 651, 857
AvrII	CCTAGG	1 cut(s)	320
BanII	GRGCYC	2 cut(s)	26, 195
BarI	GAAGNNNNNNTAC	2 cut(s)	386, 418
BauI	CACGAG	1 cut(s)	194
BbsI	GAAGAC	2 cut(s)	108, 132
Bbv12I	GWGCWC	3 cut(s)	195, 201, 423
BbvI	GCAGC	4 cut(s)	235, 766, 784, 787
BccI	CCATC	4 cut(s)	183, 340, 698, 967
BceAI	ACGGC	7 cut(s)	121, 197, 421, 449, 454, 587, 616
BciT130I	CCWGG	1 cut(s)	188
BcnI	CCSGG	2 cut(s)	416, 561
BcoDI	GTCTC	7 cut(s)	21, 48, 111, 130, 301, 443, 637
BfaI	CTAG	2 cut(s)	321, 1006
BfmI	CTRYAG	2 cut(s)	252, 749
BfoI	RGCGCY	1 cut(s)	632
BglI	GCCNNNNNGGC	1 cut(s)	565
BisI	GCNGC	7 cut(s)	134, 219, 249, 467, 780, 798, 801
BlnI	CCTAGG	1 cut(s)	320
BlpI	GCTNAGC	1 cut(s)	549
BlsI	GCNGC	7 cut(s)	135, 220, 250, 468, 781, 799, 802
Bme1390I	CCNGG	3 cut(s)	188, 416, 561
Bme18I	GGWCC	3 cut(s)	317, 651, 857
BmgBI	CACGTC	1 cut(s)	12
BmgT120I	GGNCC	6 cut(s)	317, 342, 525, 537, 651, 857
BmiI	GGNNCC	3 cut(s)	260, 343, 515
BmrFI	CCNGG	3 cut(s)	188, 416, 561
BmrI	ACTGGG	1 cut(s)	97
BmuI	ACTGGG	1 cut(s)	97
BoxI	GACNNNNGTC	1 cut(s)	649
BpiI	GAAGAC	2 cut(s)	108, 132
BpmI	CTGGAG	1 cut(s)	152
Bpu1102I	GCTNAGC	1 cut(s)	549
Bpu14I	TTCGAA	1 cut(s)	305
BpuEI	CTTGAG	2 cut(s)	26, 489
BpuMI	CCSGG	2 cut(s)	416, 561
BsaHI	GRCGYC	1 cut(s)	237
BsaI	GGTCTC	1 cut(s)	301
BsaJI	CCNNGG	4 cut(s)	186, 320, 654, 740
BsaWI	WCCGGW	2 cut(s)	261, 292
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 940, 970
Bsc4I	CCNNNNNNNGG	4 cut(s)	338, 523, 534, 560
Bse118I	RCCGGY	2 cut(s)	227, 516
Bse1I	ACTGG	3 cut(s)	103, 169, 810
Bse3DI	GCAATG	1 cut(s)	543
BseBI	CCWGG	1 cut(s)	188
BseDI	CCNNGG	4 cut(s)	186, 320, 654, 740
BseGI	GGATG	2 cut(s)	685, 709
BseLI	CCNNNNNNNGG	4 cut(s)	338, 523, 534, 560
BseMI	GCAATG	1 cut(s)	543
BseMII	CTCAG	4 cut(s)	61, 563, 592, 681
BseNI	ACTGG	3 cut(s)	103, 169, 810
BseRI	GAGGAG	2 cut(s)	142, 774
BseX3I	CGGCCG	2 cut(s)	434, 467
BseXI	GCAGC	4 cut(s)	235, 766, 784, 787
BsgI	GTGCAG	1 cut(s)	374
Bsh1236I	CGCG	1 cut(s)	246
Bsh1285I	CGRYCG	2 cut(s)	437, 470
BshFI	GGCC	6 cut(s)	344, 436, 469, 527, 538, 745
BsiEI	CGRYCG	2 cut(s)	437, 470
BsiHKAI	GWGCWC	3 cut(s)	195, 201, 423
BsiSI	CCGG	7 cut(s)	228, 262, 293, 415, 491, 517, 561
BslFI	GGGAC	1 cut(s)	157
BslI	CCNNNNNNNGG	4 cut(s)	338, 523, 534, 560
BsmAI	GTCTC	7 cut(s)	21, 48, 111, 130, 301, 443, 637
BsmBI	CGTCTC	3 cut(s)	21, 48, 130
BsmFI	GGGAC	1 cut(s)	157
BsnI	GGCC	6 cut(s)	344, 436, 469, 527, 538, 745
Bso31I	GGTCTC	1 cut(s)	301
Bsp119I	TTCGAA	1 cut(s)	305
Bsp1286I	GDGCHC	4 cut(s)	26, 195, 201, 423
Bsp143I	GATC	3 cut(s)	33, 205, 487
Bsp1720I	GCTNAGC	1 cut(s)	549
Bsp19I	CCATGG	1 cut(s)	654
BspACI	CCGC	6 cut(s)	99, 134, 210, 219, 466, 557
BspANI	GGCC	6 cut(s)	344, 436, 469, 527, 538, 745
BspCNI	CTCAG	4 cut(s)	60, 562, 591, 682
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	3 cut(s)	260, 343, 515
BspMAI	CTGCAG	1 cut(s)	753
BspPI	GGATC	2 cut(s)	200, 482
BspT104I	TTCGAA	1 cut(s)	305
BspTNI	GGTCTC	1 cut(s)	301
BsrDI	GCAATG	1 cut(s)	543
BsrFI	RCCGGY	2 cut(s)	227, 516
BsrI	ACTGG	3 cut(s)	103, 169, 810
BssAI	RCCGGY	2 cut(s)	227, 516
BssECI	CCNNGG	4 cut(s)	186, 320, 654, 740
BssMI	GATC	3 cut(s)	33, 205, 487
BssNI	GRCGYC	1 cut(s)	237
BssSI	CACGAG	1 cut(s)	194
BssT1I	CCWWGG	3 cut(s)	320, 654, 740
Bst2BI	CACGAG	1 cut(s)	194
Bst2UI	CCWGG	1 cut(s)	188
Bst4CI	ACNGT	2 cut(s)	352, 446
Bst6I	CTCTTC	1 cut(s)	46
BstACI	GRCGYC	1 cut(s)	237
BstBI	TTCGAA	1 cut(s)	305
BstC8I	GCNNGC	3 cut(s)	518, 566, 942
BstDEI	CTNAG	4 cut(s)	47, 549, 578, 690
BstDSI	CCRYGG	1 cut(s)	654
BstF5I	GGATG	2 cut(s)	685, 709
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	1 cut(s)	632
BstHHI	GCGC	3 cut(s)	248, 362, 631
BstKTI	GATC	3 cut(s)	36, 208, 490
BstMAI	GTCTC	7 cut(s)	21, 48, 111, 130, 301, 443, 637
BstMBI	GATC	3 cut(s)	33, 205, 487
BstMCI	CGRYCG	2 cut(s)	437, 470
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 224, 245, 366, 406, 565, 806
BstNI	CCWGG	1 cut(s)	188
BstNSI	RCATGY	1 cut(s)	908
BstPAI	GACNNNNGTC	1 cut(s)	649
BstSCI	CCNGG	3 cut(s)	186, 414, 559
BstSFI	CTRYAG	2 cut(s)	252, 749
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	4 cut(s)	235, 766, 784, 787
BstV2I	GAAGAC	2 cut(s)	108, 132
BstZI	CGGCCG	2 cut(s)	434, 467
BsuRI	GGCC	6 cut(s)	344, 436, 469, 527, 538, 745
BtgI	CCRYGG	1 cut(s)	654
BtrI	CACGTC	1 cut(s)	12
BtsCI	GGATG	2 cut(s)	685, 709
BtsI	GCAGTG	1 cut(s)	362
BtsIMutI	CAGTG	2 cut(s)	348, 362
Cac8I	GCNNGC	3 cut(s)	518, 566, 942
CaiI	CAGNNNCTG	1 cut(s)	800
CfoI	GCGC	3 cut(s)	248, 362, 631
Cfr10I	RCCGGY	2 cut(s)	227, 516
Cfr13I	GGNCC	6 cut(s)	317, 342, 525, 537, 651, 857
CseI	GACGC	1 cut(s)	245
Csp6I	GTAC	2 cut(s)	403, 892
CviAII	CATG	4 cut(s)	655, 806, 849, 905
CviQI	GTAC	2 cut(s)	403, 892
DdeI	CTNAG	4 cut(s)	47, 549, 578, 690
DpnI	GATC	3 cut(s)	35, 207, 489
DpnII	GATC	3 cut(s)	33, 205, 487
DraI	TTTAAA	1 cut(s)	984
EaeI	YGGCCR	2 cut(s)	434, 467
EagI	CGGCCG	2 cut(s)	434, 467
Eam1104I	CTCTTC	1 cut(s)	46
EarI	CTCTTC	1 cut(s)	46
Ecl136II	GAGCTC	1 cut(s)	193
EclXI	CGGCCG	2 cut(s)	434, 467
Eco130I	CCWWGG	3 cut(s)	320, 654, 740
Eco147I	AGGCCT	1 cut(s)	745
Eco24I	GRGCYC	2 cut(s)	26, 195
Eco31I	GGTCTC	1 cut(s)	301
Eco47I	GGWCC	3 cut(s)	317, 651, 857
Eco52I	CGGCCG	2 cut(s)	434, 467
Eco53kI	GAGCTC	1 cut(s)	193
Eco57I	CTGAAG	1 cut(s)	852
EcoICRI	GAGCTC	1 cut(s)	193
EcoO109I	RGGNCCY	2 cut(s)	317, 342
EcoRII	CCWGG	1 cut(s)	186
EcoT14I	CCWWGG	3 cut(s)	320, 654, 740
EcoT38I	GRGCYC	2 cut(s)	26, 195
ErhI	CCWWGG	3 cut(s)	320, 654, 740
Esp3I	CGTCTC	3 cut(s)	21, 48, 130
FaeI	CATG	4 cut(s)	658, 809, 852, 908
FaiI	YATR	8 cut(s)	656, 696, 698, 716, 762, 807, 850, 906
FaqI	GGGAC	1 cut(s)	157
FatI	CATG	4 cut(s)	654, 805, 848, 904
FauI	CCCGC	2 cut(s)	106, 217
FblI	GTMKAC	2 cut(s)	925, 969
Fnu4HI	GCNGC	7 cut(s)	134, 219, 249, 467, 780, 798, 801
FokI	GGATG	2 cut(s)	672, 716
FriOI	GRGCYC	2 cut(s)	26, 195
Fsp4HI	GCNGC	7 cut(s)	134, 219, 249, 467, 780, 798, 801
FspBI	CTAG	2 cut(s)	321, 1006
GlaI	GCGC	3 cut(s)	247, 361, 630
GluI	GCNGC	7 cut(s)	134, 219, 249, 467, 780, 798, 801
GsuI	CTGGAG	1 cut(s)	152
HaeII	RGCGCY	1 cut(s)	632
HaeIII	GGCC	6 cut(s)	344, 436, 469, 527, 538, 745
HapII	CCGG	7 cut(s)	228, 262, 293, 415, 491, 517, 561
HgaI	GACGC	1 cut(s)	245
HhaI	GCGC	3 cut(s)	248, 362, 631
Hin1I	GRCGYC	1 cut(s)	237
Hin1II	CATG	4 cut(s)	658, 809, 852, 908
Hin6I	GCGC	3 cut(s)	246, 360, 629
HinP1I	GCGC	3 cut(s)	246, 360, 629
HincII	GTYRAC	1 cut(s)	926
HindII	GTYRAC	1 cut(s)	926
HinfI	GANTC	7 cut(s)	5, 163, 265, 271, 385, 583, 998
HpaII	CCGG	7 cut(s)	228, 262, 293, 415, 491, 517, 561
HphI	GGTGA	3 cut(s)	28, 245, 602
Hpy166II	GTNNAC	2 cut(s)	926, 970
Hpy188I	TCNGA	6 cut(s)	21, 50, 157, 270, 276, 390
Hpy188III	TCNNGA	6 cut(s)	428, 506, 580, 689, 821, 860
Hpy8I	GTNNAC	2 cut(s)	926, 970
Hpy99I	CGWCG	9 cut(s)	16, 62, 92, 133, 161, 218, 394, 475, 637
HpyAV	CCTTC	5 cut(s)	120, 156, 355, 388, 587
HpyCH4III	ACNGT	2 cut(s)	352, 446
HpyCH4IV	ACGT	1 cut(s)	11
HpyCH4V	TGCA	5 cut(s)	355, 455, 611, 751, 877
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 224, 245, 366, 406, 565, 806
HpyF3I	CTNAG	4 cut(s)	47, 549, 578, 690
HpySE526I	ACGT	1 cut(s)	11
Hsp92I	GRCGYC	1 cut(s)	237
Hsp92II	CATG	4 cut(s)	658, 809, 852, 908
HspAI	GCGC	3 cut(s)	246, 360, 629
KroI	GCCGGC	1 cut(s)	516
KroNI	GCCGGC	1 cut(s)	518
Kzo9I	GATC	3 cut(s)	33, 205, 487
LmnI	GCTCC	5 cut(s)	190, 397, 418, 513, 787
Lsp1109I	GCAGC	4 cut(s)	235, 766, 784, 787
MaeI	CTAG	2 cut(s)	321, 1006
MaeII	ACGT	1 cut(s)	11
MaeIII	GTNAC	1 cut(s)	233
MalI	GATC	3 cut(s)	35, 207, 489
MboI	GATC	3 cut(s)	33, 205, 487
MboII	GAAGA	4 cut(s)	63, 108, 132, 170
MfeI	CAATTG	1 cut(s)	364
MhlI	GDGCHC	4 cut(s)	26, 195, 201, 423
MluCI	AATT	5 cut(s)	364, 722, 735, 757, 979
MlyI	GAGTC	1 cut(s)	1007
MmeI	TCCRAC	2 cut(s)	180, 413
MroNI	GCCGGC	1 cut(s)	516
MseI	TTAA	1 cut(s)	983
MspA1I	CMGCKG	1 cut(s)	797
MspI	CCGG	7 cut(s)	228, 262, 293, 415, 491, 517, 561
MspR9I	CCNGG	3 cut(s)	188, 416, 561
MunI	CAATTG	1 cut(s)	364
MvaI	CCWGG	1 cut(s)	188
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	7 cut(s)	218, 224, 245, 366, 406, 565, 806
NaeI	GCCGGC	1 cut(s)	518
NciI	CCSGG	2 cut(s)	416, 561
NcoI	CCATGG	1 cut(s)	654
NdeII	GATC	3 cut(s)	33, 205, 487
NgoMIV	GCCGGC	1 cut(s)	516
NlaIII	CATG	4 cut(s)	658, 809, 852, 908
NlaIV	GGNNCC	3 cut(s)	260, 343, 515
NmuCI	GTSAC	1 cut(s)	233
NspI	RCATGY	1 cut(s)	908
NspV	TTCGAA	1 cut(s)	305
PceI	AGGCCT	1 cut(s)	745
PciI	ACATGT	1 cut(s)	904
PcsI	WCGNNNNNNNCGW	4 cut(s)	17, 134, 201, 210
PdiI	GCCGGC	1 cut(s)	518
PfeI	GAWTC	6 cut(s)	5, 163, 265, 271, 385, 583
PflMI	CCANNNNNTGG	1 cut(s)	338
PfoI	TCCNGGA	1 cut(s)	414
PkrI	GCNGC	7 cut(s)	135, 220, 250, 468, 781, 799, 802
PleI	GAGTC	1 cut(s)	1006
PpsI	GAGTC	1 cut(s)	1006
PpuMI	RGGWCCY	1 cut(s)	317
PscI	ACATGT	1 cut(s)	904
PshAI	GACNNNNGTC	1 cut(s)	649
Psp124BI	GAGCTC	1 cut(s)	195
Psp5II	RGGWCCY	1 cut(s)	317
Psp6I	CCWGG	1 cut(s)	186
PspGI	CCWGG	1 cut(s)	186
PspN4I	GGNNCC	3 cut(s)	260, 343, 515
PspPI	GGNCC	6 cut(s)	317, 342, 525, 537, 651, 857
PspPPI	RGGWCCY	1 cut(s)	317
PstI	CTGCAG	1 cut(s)	753
PstNI	CAGNNNCTG	1 cut(s)	800
PvuII	CAGCTG	1 cut(s)	797
RsaI	GTAC	2 cut(s)	404, 893
RsaNI	GTAC	2 cut(s)	403, 892
SacI	GAGCTC	1 cut(s)	195
SalI	GTCGAC	1 cut(s)	924
SaqAI	TTAA	1 cut(s)	983
SatI	GCNGC	7 cut(s)	134, 219, 249, 467, 780, 798, 801
Sau3AI	GATC	3 cut(s)	33, 205, 487
Sau96I	GGNCC	6 cut(s)	317, 342, 525, 537, 651, 857
SchI	GAGTC	1 cut(s)	1007
ScrFI	CCNGG	3 cut(s)	188, 416, 561
SduI	GDGCHC	4 cut(s)	26, 195, 201, 423
SfcI	CTRYAG	2 cut(s)	252, 749
SfuI	TTCGAA	1 cut(s)	305
SinI	GGWCC	3 cut(s)	317, 651, 857
SmiI	ATTTAAAT	1 cut(s)	984
SmlI	CTYRAG	2 cut(s)	41, 504
SmoI	CTYRAG	2 cut(s)	41, 504
Sse9I	AATT	5 cut(s)	364, 722, 735, 757, 979
SseBI	AGGCCT	1 cut(s)	745
SsiI	CCGC	6 cut(s)	99, 134, 210, 219, 466, 557
SspMI	CTAG	2 cut(s)	321, 1006
SstI	GAGCTC	1 cut(s)	195
StuI	AGGCCT	1 cut(s)	745
StyD4I	CCNGG	3 cut(s)	186, 414, 559
StyI	CCWWGG	3 cut(s)	320, 654, 740
SwaI	ATTTAAAT	1 cut(s)	984
TaaI	ACNGT	2 cut(s)	352, 446
TaiI	ACGT	1 cut(s)	14
TaqI	TCGA	5 cut(s)	305, 473, 586, 925, 1001
TaqII	GACCGA	1 cut(s)	639
TasI	AATT	5 cut(s)	364, 722, 735, 757, 979
TauI	GCSGC	3 cut(s)	136, 221, 469
TfiI	GAWTC	6 cut(s)	5, 163, 265, 271, 385, 583
Tru1I	TTAA	1 cut(s)	983
Tru9I	TTAA	1 cut(s)	983
TscAI	CASTG	2 cut(s)	355, 362
TseFI	GTSAC	1 cut(s)	233
TseI	GCWGC	4 cut(s)	248, 779, 797, 800
Tsp45I	GTSAC	1 cut(s)	233
TspDTI	ATGAA	1 cut(s)	717
TspGWI	ACGGA	3 cut(s)	112, 831, 879
TspRI	CASTG	2 cut(s)	355, 362
Van91I	CCANNNNNTGG	1 cut(s)	338
VpaK11BI	GGWCC	3 cut(s)	317, 651, 857
XapI	RAATTY	1 cut(s)	735
XceI	RCATGY	1 cut(s)	908
XcmI	CCANNNNNNNNNTGG	1 cut(s)	561
XmaJI	CCTAGG	1 cut(s)	320
XmiI	GTMKAC	2 cut(s)	925, 969
XspI	CTAG	2 cut(s)	321, 1006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.