Small nuclear ribonucleoprotein SM
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47640 AT2G47640 AT2G47640 AT2G47640 AT3G62840 AT3G62840 |
| fragaria_vesca | FvH4_1g13940 FvH4_5g18870 |
| malus_domestica | MD02G1152600.v1.1 MD06G1058300.v1.1 MD15G1267000.v1.1 |
| prunus_persica | Prupe.7G149600_v2.0.a1 Prupe.8G230200_v2.0.a1 |
| pyrus_communis | pycom02g12040 pycom06g04920 pycom15g23260 |
| rosa_chinensis | RchiOBHm_Chr2g0102251 RchiOBHm_Chr7g0203251 |
| rosa_laevigata | RLG00000003540 |
| rosa_multiflora | Rmu_sc0001311.1_g000006 Rmu_sc0001516.1_g000064 Rmu_sc0004654.1_g000018 Rmu_sc0009229.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00140630 Rroxscaffold_3G00253420 Rroxscaffold_3G00253910 |
| rosa_rugosa | Rorug02G0106000 Rorug07G0075400 |
| rosa_samantha | Rh2BG159900 Rh2CG159500 Rh6CG171300 Rh7AG204800 Rh7BG204200 Rh7CG215800 Rh7DG211400 |
| rosa_wichuraiana | Rw2G012030 Rw7G017830 Rw7G018290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 8 |
| AgsI | TTSAA | 1 cut(s) | 52 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 32, 64 |
| AluBI | AGCT | 1 cut(s) | 106 |
| AluI | AGCT | 1 cut(s) | 106 |
| AoxI | GGCC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 3 cut(s) | 59, 127, 160 |
| AvaII | GGWCC | 3 cut(s) | 59, 127, 160 |
| BccI | CCATC | 2 cut(s) | 17, 118 |
| Bme18I | GGWCC | 3 cut(s) | 59, 127, 160 |
| BmgT120I | GGNCC | 3 cut(s) | 59, 127, 160 |
| BmiI | GGNNCC | 2 cut(s) | 28, 162 |
| BoxI | GACNNNNGTC | 1 cut(s) | 158 |
| BpuEI | CTTGAG | 1 cut(s) | 152 |
| BsaJI | CCNNGG | 1 cut(s) | 174 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| BseDI | CCNNGG | 1 cut(s) | 174 |
| BseGI | GGATG | 1 cut(s) | 231 |
| BseMII | CTCAG | 1 cut(s) | 147 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BshFI | GGCC | 1 cut(s) | 10 |
| BslFI | GGGAC | 1 cut(s) | 146 |
| BsmFI | GGGAC | 1 cut(s) | 146 |
| BsnI | GGCC | 1 cut(s) | 10 |
| BspANI | GGCC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 148 |
| BspLI | GGNNCC | 2 cut(s) | 28, 162 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssECI | CCNNGG | 1 cut(s) | 174 |
| BssT1I | CCWWGG | 1 cut(s) | 174 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstDEI | CTNAG | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 231 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 158 |
| BsuRI | GGCC | 1 cut(s) | 10 |
| BtsCI | GGATG | 1 cut(s) | 231 |
| Cfr13I | GGNCC | 3 cut(s) | 59, 127, 160 |
| CviJI | RGCY | 3 cut(s) | 10, 106, 114 |
| CviKI_1 | RGCY | 3 cut(s) | 10, 106, 114 |
| DdeI | CTNAG | 1 cut(s) | 156 |
| EaeI | YGGCCR | 1 cut(s) | 8 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco130I | CCWWGG | 1 cut(s) | 174 |
| Eco47I | GGWCC | 3 cut(s) | 59, 127, 160 |
| EcoO109I | RGGNCCY | 1 cut(s) | 160 |
| EcoT14I | CCWWGG | 1 cut(s) | 174 |
| ErhI | CCWWGG | 1 cut(s) | 174 |
| FaqI | GGGAC | 1 cut(s) | 146 |
| FokI | GGATG | 1 cut(s) | 238 |
| HaeIII | GGCC | 1 cut(s) | 10 |
| HincII | GTYRAC | 1 cut(s) | 202 |
| HindII | GTYRAC | 1 cut(s) | 202 |
| HindIII | AAGCTT | 1 cut(s) | 104 |
| HinfI | GANTC | 3 cut(s) | 4, 213, 241 |
| HpaI | GTTAAC | 1 cut(s) | 202 |
| Hpy166II | GTNNAC | 2 cut(s) | 153, 202 |
| Hpy188III | TCNNGA | 1 cut(s) | 73 |
| Hpy8I | GTNNAC | 2 cut(s) | 153, 202 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 1 cut(s) | 156 |
| KspAI | GTTAAC | 1 cut(s) | 202 |
| LpnPI | CCDG | 2 cut(s) | 208, 210 |
| MboII | GAAGA | 4 cut(s) | 32, 56, 133, 196 |
| MluCI | AATT | 1 cut(s) | 168 |
| MnlI | CCTC | 5 cut(s) | 10, 31, 136, 151, 241 |
| MseI | TTAA | 1 cut(s) | 201 |
| NlaIV | GGNNCC | 2 cut(s) | 28, 162 |
| PfeI | GAWTC | 3 cut(s) | 4, 213, 241 |
| PpuMI | RGGWCCY | 1 cut(s) | 160 |
| PshAI | GACNNNNGTC | 1 cut(s) | 158 |
| Psp5II | RGGWCCY | 1 cut(s) | 160 |
| PspN4I | GGNNCC | 2 cut(s) | 28, 162 |
| PspPI | GGNCC | 3 cut(s) | 59, 127, 160 |
| PspPPI | RGGWCCY | 1 cut(s) | 160 |
| SaqAI | TTAA | 1 cut(s) | 201 |
| Sau96I | GGNCC | 3 cut(s) | 59, 127, 160 |
| SetI | ASST | 2 cut(s) | 108, 162 |
| SgeI | CNNG | 6 cut(s) | 85, 143, 187, 193, 209, 235 |
| SinI | GGWCC | 3 cut(s) | 59, 127, 160 |
| SmlI | CTYRAG | 1 cut(s) | 131 |
| SmoI | CTYRAG | 1 cut(s) | 131 |
| Sse9I | AATT | 1 cut(s) | 168 |
| SspI | AATATT | 1 cut(s) | 55 |
| StyI | CCWWGG | 1 cut(s) | 174 |
| TasI | AATT | 1 cut(s) | 168 |
| TfiI | GAWTC | 3 cut(s) | 4, 213, 241 |
| Tru1I | TTAA | 1 cut(s) | 201 |
| Tru9I | TTAA | 1 cut(s) | 201 |
| TspDTI | ATGAA | 3 cut(s) | 17, 95, 205 |
| TspGWI | ACGGA | 1 cut(s) | 223 |
| VpaK11BI | GGWCC | 3 cut(s) | 59, 127, 160 |