Small nuclear ribonucleoprotein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47640 AT2G47640 AT2G47640 AT2G47640 AT3G62840 AT3G62840 |
| fragaria_vesca | FvH4_1g13940 FvH4_5g18870 |
| malus_domestica | MD02G1152600.v1.1 MD06G1058300.v1.1 MD15G1267000.v1.1 |
| prunus_persica | Prupe.7G149600_v2.0.a1 Prupe.8G230200_v2.0.a1 |
| pyrus_communis | pycom02g12040 pycom06g04920 pycom15g23260 |
| rosa_chinensis | RchiOBHm_Chr2g0102251 RchiOBHm_Chr7g0203251 |
| rosa_laevigata | RLG00000003540 |
| rosa_multiflora | Rmu_sc0001311.1_g000006 Rmu_sc0001516.1_g000064 Rmu_sc0004654.1_g000018 Rmu_sc0009229.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00140630 Rroxscaffold_3G00253420 Rroxscaffold_3G00253910 |
| rosa_rugosa | Rorug02G0106000 Rorug07G0075400 |
| rosa_samantha | Rh2BG159900 Rh2CG159500 Rh6CG171300 Rh7AG204800 Rh7BG204200 Rh7CG215800 Rh7DG211400 |
| rosa_wichuraiana | Rw2G012030 Rw7G017830 Rw7G018290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 49 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 29, 61 |
| AluBI | AGCT | 1 cut(s) | 142 |
| AluI | AGCT | 1 cut(s) | 142 |
| AspS9I | GGNCC | 3 cut(s) | 56, 99, 163 |
| AvaII | GGWCC | 3 cut(s) | 56, 99, 163 |
| BccI | CCATC | 1 cut(s) | 154 |
| Bme18I | GGWCC | 3 cut(s) | 56, 99, 163 |
| BmgT120I | GGNCC | 3 cut(s) | 56, 99, 163 |
| BmiI | GGNNCC | 1 cut(s) | 25 |
| BpuEI | CTTGAG | 1 cut(s) | 188 |
| Bse1I | ACTGG | 1 cut(s) | 194 |
| BseGI | GGATG | 1 cut(s) | 228 |
| BseNI | ACTGG | 1 cut(s) | 194 |
| BspLI | GGNNCC | 1 cut(s) | 25 |
| BsrI | ACTGG | 1 cut(s) | 194 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| Bst6I | CTCTTC | 1 cut(s) | 36 |
| BstF5I | GGATG | 1 cut(s) | 228 |
| BtsCI | GGATG | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 3 cut(s) | 56, 99, 163 |
| CviJI | RGCY | 2 cut(s) | 142, 150 |
| CviKI_1 | RGCY | 2 cut(s) | 142, 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 36 |
| EarI | CTCTTC | 1 cut(s) | 36 |
| Eco47I | GGWCC | 3 cut(s) | 56, 99, 163 |
| EcoO109I | RGGNCCY | 1 cut(s) | 99 |
| FaiI | YATR | 3 cut(s) | 19, 21, 129 |
| FokI | GGATG | 1 cut(s) | 235 |
| HincII | GTYRAC | 1 cut(s) | 199 |
| HindII | GTYRAC | 1 cut(s) | 199 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| HinfI | GANTC | 2 cut(s) | 210, 238 |
| HpaI | GTTAAC | 1 cut(s) | 199 |
| Hpy166II | GTNNAC | 1 cut(s) | 199 |
| Hpy188III | TCNNGA | 1 cut(s) | 70 |
| Hpy8I | GTNNAC | 1 cut(s) | 199 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 1 cut(s) | 190 |
| KspAI | GTTAAC | 1 cut(s) | 199 |
| LpnPI | CCDG | 3 cut(s) | 82, 205, 207 |
| MboII | GAAGA | 3 cut(s) | 53, 169, 193 |
| MfeI | CAATTG | 2 cut(s) | 108, 121 |
| MluCI | AATT | 2 cut(s) | 108, 121 |
| MnlI | CCTC | 4 cut(s) | 28, 112, 125, 238 |
| MseI | TTAA | 1 cut(s) | 198 |
| MunI | CAATTG | 2 cut(s) | 108, 121 |
| NlaIV | GGNNCC | 1 cut(s) | 25 |
| PfeI | GAWTC | 2 cut(s) | 210, 238 |
| PpuMI | RGGWCCY | 1 cut(s) | 99 |
| Psp5II | RGGWCCY | 1 cut(s) | 99 |
| PspN4I | GGNNCC | 1 cut(s) | 25 |
| PspPI | GGNCC | 3 cut(s) | 56, 99, 163 |
| PspPPI | RGGWCCY | 1 cut(s) | 99 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| Sau96I | GGNCC | 3 cut(s) | 56, 99, 163 |
| SetI | ASST | 2 cut(s) | 101, 144 |
| SgeI | CNNG | 6 cut(s) | 82, 109, 179, 190, 206, 232 |
| SinI | GGWCC | 3 cut(s) | 56, 99, 163 |
| SmlI | CTYRAG | 1 cut(s) | 167 |
| SmoI | CTYRAG | 1 cut(s) | 167 |
| Sse9I | AATT | 2 cut(s) | 108, 121 |
| SspI | AATATT | 1 cut(s) | 52 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TasI | AATT | 2 cut(s) | 108, 121 |
| TfiI | GAWTC | 2 cut(s) | 210, 238 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TspDTI | ATGAA | 2 cut(s) | 92, 202 |
| TspGWI | ACGGA | 1 cut(s) | 220 |
| VpaK11BI | GGWCC | 3 cut(s) | 56, 99, 163 |