Small nuclear ribonucleoprotein SM
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47640 AT2G47640 AT2G47640 AT2G47640 AT3G62840 AT3G62840 |
| fragaria_vesca | FvH4_1g13940 FvH4_5g18870 |
| malus_domestica | MD02G1152600.v1.1 MD06G1058300.v1.1 MD15G1267000.v1.1 |
| prunus_persica | Prupe.7G149600_v2.0.a1 Prupe.8G230200_v2.0.a1 |
| pyrus_communis | pycom02g12040 pycom06g04920 pycom15g23260 |
| rosa_chinensis | RchiOBHm_Chr2g0102251 RchiOBHm_Chr7g0203251 |
| rosa_laevigata | RLG00000003540 |
| rosa_multiflora | Rmu_sc0001311.1_g000006 Rmu_sc0001516.1_g000064 Rmu_sc0004654.1_g000018 Rmu_sc0009229.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00140630 Rroxscaffold_3G00253420 Rroxscaffold_3G00253910 |
| rosa_rugosa | Rorug02G0106000 Rorug07G0075400 |
| rosa_samantha | Rh2BG159900 Rh2CG159500 Rh6CG171300 Rh7AG204800 Rh7BG204200 Rh7CG215800 Rh7DG211400 |
| rosa_wichuraiana | Rw2G012030 Rw7G017830 Rw7G018290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 230 |
| AcoI | YGGCCR | 1 cut(s) | 8 |
| AgsI | TTSAA | 1 cut(s) | 52 |
| AjnI | CCWGG | 1 cut(s) | 105 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 32, 64 |
| AluBI | AGCT | 1 cut(s) | 139 |
| AluI | AGCT | 1 cut(s) | 139 |
| AoxI | GGCC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 4 cut(s) | 59, 109, 160, 193 |
| AvaII | GGWCC | 4 cut(s) | 59, 109, 160, 193 |
| BccI | CCATC | 2 cut(s) | 17, 151 |
| BciT130I | CCWGG | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 1 cut(s) | 107 |
| Bme18I | GGWCC | 4 cut(s) | 59, 109, 160, 193 |
| BmgT120I | GGNCC | 4 cut(s) | 59, 109, 160, 193 |
| BmiI | GGNNCC | 2 cut(s) | 28, 195 |
| BmrFI | CCNGG | 1 cut(s) | 107 |
| BoxI | GACNNNNGTC | 1 cut(s) | 191 |
| BpuEI | CTTGAG | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 1 cut(s) | 105 |
| Bse3DI | GCAATG | 1 cut(s) | 86 |
| BseBI | CCWGG | 1 cut(s) | 107 |
| BseDI | CCNNGG | 1 cut(s) | 105 |
| BseMI | GCAATG | 1 cut(s) | 86 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseRI | GAGGAG | 1 cut(s) | 191 |
| BshFI | GGCC | 1 cut(s) | 10 |
| BslFI | GGGAC | 1 cut(s) | 179 |
| BsmFI | GGGAC | 1 cut(s) | 179 |
| BsnI | GGCC | 1 cut(s) | 10 |
| BspANI | GGCC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspLI | GGNNCC | 2 cut(s) | 28, 195 |
| BsrDI | GCAATG | 1 cut(s) | 86 |
| BssECI | CCNNGG | 1 cut(s) | 105 |
| Bst2UI | CCWGG | 1 cut(s) | 107 |
| Bst4CI | ACNGT | 1 cut(s) | 134 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstDEI | CTNAG | 3 cut(s) | 189, 236, 246 |
| BstNI | CCWGG | 1 cut(s) | 107 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 191 |
| BstSCI | CCNGG | 1 cut(s) | 105 |
| BsuRI | GGCC | 1 cut(s) | 10 |
| Cfr13I | GGNCC | 4 cut(s) | 59, 109, 160, 193 |
| CviJI | RGCY | 3 cut(s) | 10, 139, 147 |
| CviKI_1 | RGCY | 3 cut(s) | 10, 139, 147 |
| DdeI | CTNAG | 3 cut(s) | 189, 236, 246 |
| EaeI | YGGCCR | 1 cut(s) | 8 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco47I | GGWCC | 4 cut(s) | 59, 109, 160, 193 |
| EcoO109I | RGGNCCY | 2 cut(s) | 109, 193 |
| EcoRII | CCWGG | 1 cut(s) | 105 |
| FaiI | YATR | 1 cut(s) | 230 |
| FaqI | GGGAC | 1 cut(s) | 179 |
| HaeIII | GGCC | 1 cut(s) | 10 |
| HindIII | AAGCTT | 1 cut(s) | 137 |
| HinfI | GANTC | 3 cut(s) | 4, 218, 241 |
| Hpy166II | GTNNAC | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 1 cut(s) | 73 |
| Hpy8I | GTNNAC | 1 cut(s) | 186 |
| HpyCH4III | ACNGT | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 3 cut(s) | 189, 236, 246 |
| LpnPI | CCDG | 2 cut(s) | 92, 119 |
| MboII | GAAGA | 3 cut(s) | 32, 56, 166 |
| MfeI | CAATTG | 1 cut(s) | 118 |
| MluCI | AATT | 2 cut(s) | 118, 231 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 6 cut(s) | 10, 31, 122, 169, 184, 218 |
| MspR9I | CCNGG | 1 cut(s) | 107 |
| MunI | CAATTG | 1 cut(s) | 118 |
| MvaI | CCWGG | 1 cut(s) | 107 |
| NlaIV | GGNNCC | 2 cut(s) | 28, 195 |
| PfeI | GAWTC | 2 cut(s) | 218, 241 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| PpuMI | RGGWCCY | 2 cut(s) | 109, 193 |
| PshAI | GACNNNNGTC | 1 cut(s) | 191 |
| PsiI | TTATAA | 1 cut(s) | 230 |
| Psp5II | RGGWCCY | 2 cut(s) | 109, 193 |
| Psp6I | CCWGG | 1 cut(s) | 105 |
| PspGI | CCWGG | 1 cut(s) | 105 |
| PspN4I | GGNNCC | 2 cut(s) | 28, 195 |
| PspPI | GGNCC | 4 cut(s) | 59, 109, 160, 193 |
| PspPPI | RGGWCCY | 2 cut(s) | 109, 193 |
| Sau96I | GGNCC | 4 cut(s) | 59, 109, 160, 193 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 107 |
| SetI | ASST | 3 cut(s) | 111, 141, 195 |
| SgeI | CNNG | 4 cut(s) | 85, 118, 119, 176 |
| SinI | GGWCC | 4 cut(s) | 59, 109, 160, 193 |
| SmlI | CTYRAG | 1 cut(s) | 164 |
| SmoI | CTYRAG | 1 cut(s) | 164 |
| Sse9I | AATT | 2 cut(s) | 118, 231 |
| SspI | AATATT | 1 cut(s) | 55 |
| StyD4I | CCNGG | 1 cut(s) | 105 |
| TaaI | ACNGT | 1 cut(s) | 134 |
| TasI | AATT | 2 cut(s) | 118, 231 |
| TfiI | GAWTC | 2 cut(s) | 218, 241 |
| TspGWI | ACGGA | 1 cut(s) | 200 |
| VpaK11BI | GGWCC | 4 cut(s) | 59, 109, 160, 193 |