Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002558.1

Orthogroup ID

OG0010633

Physical Location & Seq

Genomic Coordinates Reverse (-)

13074 .. 16753

Gene Structure 3680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002558.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

atgcgatcgtctattcctccatatgagatcaaggttcccatcaaagttcgcattcagggtcaagattcggtatacacattcgtcaagagcattgtgtatcatcttgtacaaccagcttcaaaagcttctagttccagttcaatggaatgggttattaaagtccgagatgttgaacccgaaaatcgttgtcttttgttacatccactttccacctcgttgcctttagagccgaattcagagtcgtttccagatgaattaaacgtgttggaatttcaggtattggaattagcaagatgttatagtctgcgtaactccaattccaatgaggccgaacacaaggtggtcgtatcctcggatcctcattggcaagtgctcatggtgatggctgaggcgaaactatactactgggatttcagtaccgctagtgttgagattgaagagtgcaccttagtacaggatatactctttgaacaccacaaattcgatgatattatttttcataagagcaagttctatgttgttgccgaggatggtacagctgtatccattgattcttccttgaagaagacacaggtcgggtctccaacaacttgtttttgcagtaagaaattggtggagtcattgggggatctacttttagttgagaaacgtgcgaggcctttgaggcggagatgtcctcataatccaactcatcgtggatgcaaggtttacaagttgaacgaacctgagaggcaatgggttgaaatgaagagcttgagtaaagatcgaagtttgtttgtgggtgactacaccagcttctctgcttctactcgagatattcccagatgcttggggaatcacatttttctctcatcagatccatacttagggtttcatcgatccaagatcaagttgtacgtgaggcttctcatggatgcggaggtggtagtggtggaggtgatagtcagcaaacatgataaggtaggggatctcagggagcatctacaggtggcagacttccttccccctccacattatctctttatgcataaaatgtctgtgatgttcgagataattccgttcagatgtcataacgttctcgaaggtgatactatagatgtagttccagtgccgcaagtgctggaacaagaaaaagatgtaaaggtgttggtgacgtccttccatggaagtaaaaattactttgaagaggatttcgacacggagaaaataaggtgtctcttacccaattcctgcatatactgttatactagtgtgttccatgaactaatgacatctagtggtccacggttcactcacttgcagaacgagaggaggtgttatacgtacactaacatacgcagcggtgacacagtacaaattgtttgtttttcaggaataaaatttaataagttgaaggtgaatgtgattgtggattataagggaactttggtggatatacatccttttaaaaaggtgaaagagctaaggaaggagctgaaggagaagaagttacatctcccgcgacggtattacttcatactgctcgtccaaaatgctcaatatcttatggacgatgaagtggaatttatgaattacttgatccatcttgacgatgtgatgtacgatgcagatggaacaatcaaatttgtgccaattgttaatataaaggatacaggtgtgatttctgaggcattgctgtacatttgtgaggactttcgtgacgttgacctgcaaacatggctgcaggagaccattgtgagtatggcagttgccagcgccatatttgatgctgcaattggaggatggatgaatgatgctattggccagagaaagtcaatcctgtgtgcagattttgtgttcttccttgcctcattggtgcaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0032392 GO:0032446 GO:0032508 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box F-box-like

Protein Analysis

620

Amino Acids

71.41

Weight (kDa)

6.14

Isoelectric Point (pI)

41.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010633)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000027029 RLG00000027032 RLG00000027034
rosa_multiflora	Rmu_sc0002558.1_g000001 Rmu_sc0002558.1_g000006 Rmu_sc0002558.1_g000007
rosa_roxburghii	Rroxscaffold_4G00286470 Rroxscaffold_4G00286480
rosa_rugosa	Rorug01G0357500
rosa_samantha	Rh1AG365900 Rh1AG366000 Rh1AG366100 Rh1AG366500 Rh1AG366600 Rh1CG342000 Rh1CG342100 Rh1CG342800 Rh1CG343000 Rh1CG344300
rosa_wichuraiana	Rw1G032240 Rw1G032260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1416
AatII	GACGTC	1 cut(s)	1157
Acc36I	ACCTGC	1 cut(s)	1716
AccI	GTMKAC	1 cut(s)	72
AccII	CGCG	1 cut(s)	1501
AciI	CCGC	6 cut(s)	420, 667, 917, 1112, 1341, 1499
AclI	AACGTT	1 cut(s)	1074
AclWI	GGATC	7 cut(s)	350, 363, 636, 851, 873, 975, 1573
AcoI	YGGCCR	1 cut(s)	1801
AcsI	RAATTY	6 cut(s)	232, 269, 479, 1379, 1562, 1622
AcuI	CTGAAG	1 cut(s)	1496
AcyI	GRCGYC	1 cut(s)	1154
AdeI	CACNNNGTG	1 cut(s)	340
AfaI	GTAC	9 cut(s)	108, 418, 453, 535, 896, 1325, 1353, 1601, 1679
AfiI	CCNNNNNNNGG	1 cut(s)	866
AflIII	ACRYGT	1 cut(s)	261
AhlI	ACTAGT	1 cut(s)	1247
AluBI	AGCT	7 cut(s)	116, 125, 539, 753, 795, 1462, 1474
AluI	AGCT	7 cut(s)	116, 125, 539, 753, 795, 1462, 1474
Alw21I	GWGCWC	2 cut(s)	375, 446
Alw26I	GTCTC	3 cut(s)	585, 1220, 1721
Alw44I	GTGCAC	1 cut(s)	442
AlwI	GGATC	7 cut(s)	350, 363, 636, 851, 873, 975, 1573
Ama87I	CYCGRG	1 cut(s)	810
AoxI	GGCC	3 cut(s)	327, 656, 1801
ApaLI	GTGCAC	1 cut(s)	442
ApeKI	GCWGC	3 cut(s)	1338, 1720, 1769
ApoI	RAATTY	6 cut(s)	232, 269, 479, 1379, 1562, 1622
ArsI	GACNNNNNNTTYG	2 cut(s)	224, 256
AspLEI	GCGC	1 cut(s)	1757
AspS9I	GGNCC	1 cut(s)	1280
AsuHPI	GGTGA	8 cut(s)	391, 794, 949, 1097, 1162, 1355, 1408, 1465
AvaI	CYCGRG	1 cut(s)	810
AvaII	GGWCC	1 cut(s)	1280
BaeGI	GKGCMC	1 cut(s)	446
BaeI	ACNNNNGTAYC	6 cut(s)	525, 525, 558, 558, 1641, 1674
BalI	TGGCCA	1 cut(s)	1803
BamHI	GGATCC	1 cut(s)	355
BbsI	GAAGAC	1 cut(s)	572
Bbv12I	GWGCWC	2 cut(s)	375, 446
BbvCI	CCTCAGC	1 cut(s)	387
BbvI	GCAGC	3 cut(s)	1350, 1707, 1756
BccI	CCATC	6 cut(s)	47, 376, 524, 1590, 1604, 1776
BciVI	GTATCC	3 cut(s)	358, 553, 1642
BcoDI	GTCTC	3 cut(s)	585, 1220, 1721
BcuI	ACTAGT	1 cut(s)	1247
BfaI	CTAG	4 cut(s)	129, 423, 1248, 1275
BfmI	CTRYAG	3 cut(s)	983, 1092, 1721
BfoI	RGCGCY	1 cut(s)	1758
BfuAI	ACCTGC	1 cut(s)	1716
BfuI	GTATCC	3 cut(s)	358, 553, 1642
BglI	GCCNNNNNGGC	1 cut(s)	664
BisI	GCNGC	4 cut(s)	1112, 1339, 1721, 1770
BlsI	GCNGC	4 cut(s)	1113, 1340, 1722, 1771
Bme18I	GGWCC	1 cut(s)	1280
BmeT110I	CYCGRG	1 cut(s)	810
BmgT120I	GGNCC	1 cut(s)	1280
BmiI	GGNNCC	2 cut(s)	36, 357
BmrI	ACTGGG	1 cut(s)	415
BmsI	GCATC	7 cut(s)	689, 815, 904, 988, 1594, 1756, 1783
BmuI	ACTGGG	1 cut(s)	415
BoxI	GACNNNNGTC	1 cut(s)	572
BpiI	GAAGAC	1 cut(s)	572
BplI	GAGNNNNNCTC	2 cut(s)	661, 693
Bpu10I	CCTNAGC	2 cut(s)	387, 1463
BpuEI	CTTGAG	1 cut(s)	775
Bsa29I	ATCGAT	1 cut(s)	877
BsaAI	YACGTR	2 cut(s)	898, 1323
BsaBI	GATNNNNATC	1 cut(s)	1437
BsaHI	GRCGYC	1 cut(s)	1154
BsaI	GGTCTC	2 cut(s)	585, 1721
BsaJI	CCNNGG	4 cut(s)	351, 525, 1162, 1283
BsaXI	ACNNNNNCTCC	2 cut(s)	1472, 1502
Bsc4I	CCNNNNNNNGG	1 cut(s)	866
Bse1I	ACTGG	3 cut(s)	135, 410, 1106
Bse3DI	GCAATG	2 cut(s)	740, 1670
Bse8I	GATNNNNATC	1 cut(s)	1437
BseCI	ATCGAT	1 cut(s)	877
BseDI	CCNNGG	4 cut(s)	351, 525, 1162, 1283
BseGI	GGATG	7 cut(s)	199, 535, 704, 919, 1438, 1787, 1791
BseJI	GATNNNNATC	1 cut(s)	1437
BseLI	CCNNNNNNNGG	1 cut(s)	866
BseMI	GCAATG	2 cut(s)	740, 1670
BseMII	CTCAG	4 cut(s)	378, 717, 985, 1656
BseNI	ACTGG	3 cut(s)	135, 410, 1106
BseRI	GAGGAG	1 cut(s)	1324
BseSI	GKGCMC	1 cut(s)	446
BseXI	GCAGC	3 cut(s)	1350, 1707, 1756
BsgI	GTGCAG	1 cut(s)	1845
Bsh1236I	CGCG	1 cut(s)	1501
Bsh1285I	CGRYCG	1 cut(s)	8
BshFI	GGCC	3 cut(s)	329, 658, 1803
BshVI	ATCGAT	1 cut(s)	877
BsiEI	CGRYCG	1 cut(s)	8
BsiHKAI	GWGCWC	2 cut(s)	375, 446
BsiHKCI	CYCGRG	1 cut(s)	810
BslI	CCNNNNNNNGG	1 cut(s)	866
BsmAI	GTCTC	3 cut(s)	585, 1220, 1721
BsmI	GAATGC	1 cut(s)	51
BsnI	GGCC	3 cut(s)	329, 658, 1803
Bso31I	GGTCTC	2 cut(s)	585, 1721
BsoBI	CYCGRG	1 cut(s)	810
Bsp1286I	GDGCHC	2 cut(s)	375, 446
Bsp1407I	TGTACA	2 cut(s)	106, 1677
Bsp19I	CCATGG	1 cut(s)	1162
BspACI	CCGC	6 cut(s)	420, 667, 917, 1112, 1341, 1499
BspANI	GGCC	3 cut(s)	329, 658, 1803
BspCNI	CTCAG	4 cut(s)	379, 718, 984, 1657
BspDI	ATCGAT	1 cut(s)	877
BspFNI	CGCG	1 cut(s)	1501
BspLI	GGNNCC	2 cut(s)	36, 357
BspMAI	CTGCAG	1 cut(s)	1725
BspMI	ACCTGC	1 cut(s)	1716
BspPI	GGATC	7 cut(s)	350, 363, 636, 851, 873, 975, 1573
BspQI	GCTCTTC	1 cut(s)	743
BspTNI	GGTCTC	2 cut(s)	585, 1721
BsrDI	GCAATG	2 cut(s)	740, 1670
BsrGI	TGTACA	2 cut(s)	106, 1677
BsrI	ACTGG	3 cut(s)	135, 410, 1106
BssECI	CCNNGG	4 cut(s)	351, 525, 1162, 1283
BssNAI	GTATAC	1 cut(s)	73
BssNI	GRCGYC	1 cut(s)	1154
BssT1I	CCWWGG	1 cut(s)	1162
Bst1107I	GTATAC	1 cut(s)	73
Bst4CI	ACNGT	4 cut(s)	1241, 1287, 1351, 1506
Bst6I	CTCTTC	3 cut(s)	432, 743, 1179
BstACI	GRCGYC	1 cut(s)	1154
BstAUI	TGTACA	2 cut(s)	106, 1677
BstBAI	YACGTR	2 cut(s)	898, 1323
BstC8I	GCNNGC	1 cut(s)	1753
BstDEI	CTNAG	7 cut(s)	387, 448, 726, 865, 971, 1463, 1665
BstDSI	CCRYGG	2 cut(s)	1162, 1283
BstF5I	GGATG	7 cut(s)	199, 535, 704, 919, 1438, 1787, 1791
BstFNI	CGCG	1 cut(s)	1501
BstH2I	RGCGCY	1 cut(s)	1758
BstHHI	GCGC	1 cut(s)	1757
BstMAI	GTCTC	3 cut(s)	585, 1220, 1721
BstMCI	CGRYCG	1 cut(s)	8
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 226, 664, 1117, 1717
BstPAI	GACNNNNGTC	1 cut(s)	572
BstSFI	CTRYAG	3 cut(s)	983, 1092, 1721
BstSLI	GKGCMC	1 cut(s)	446
BstSNI	TACGTA	1 cut(s)	1323
BstUI	CGCG	1 cut(s)	1501
BstV1I	GCAGC	3 cut(s)	1350, 1707, 1756
BstV2I	GAAGAC	1 cut(s)	572
BstX2I	RGATCY	4 cut(s)	355, 628, 856, 967
BstXI	CCANNNNNNTGG	2 cut(s)	142, 829
BstYI	RGATCY	4 cut(s)	355, 628, 856, 967
BstZ17I	GTATAC	1 cut(s)	73
Bsu15I	ATCGAT	1 cut(s)	877
BsuI	GTATCC	3 cut(s)	358, 553, 1642
BsuRI	GGCC	3 cut(s)	329, 658, 1803
BsuTUI	ATCGAT	1 cut(s)	877
BtgI	CCRYGG	2 cut(s)	1162, 1283
BtsCI	GGATG	7 cut(s)	199, 535, 704, 919, 1438, 1787, 1791
BtsIMutI	CAGTG	1 cut(s)	1113
BveI	ACCTGC	1 cut(s)	1716
Cac8I	GCNNGC	1 cut(s)	1753
CfoI	GCGC	1 cut(s)	1757
Cfr13I	GGNCC	1 cut(s)	1280
ClaI	ATCGAT	1 cut(s)	877
Csp6I	GTAC	9 cut(s)	107, 417, 452, 534, 895, 1324, 1352, 1600, 1678
CviAII	CATG	6 cut(s)	376, 910, 953, 1163, 1259, 1716
CviQI	GTAC	9 cut(s)	107, 417, 452, 534, 895, 1324, 1352, 1600, 1678
DdeI	CTNAG	7 cut(s)	387, 448, 726, 865, 971, 1463, 1665
DraI	TTTAAA	1 cut(s)	1447
DraIII	CACNNNGTG	1 cut(s)	340
EaeI	YGGCCR	1 cut(s)	1801
Eam1104I	CTCTTC	3 cut(s)	432, 743, 1179
EarI	CTCTTC	3 cut(s)	432, 743, 1179
EciI	GGCGGA	1 cut(s)	682
Eco105I	TACGTA	1 cut(s)	1323
Eco130I	CCWWGG	1 cut(s)	1162
Eco147I	AGGCCT	1 cut(s)	658
Eco31I	GGTCTC	2 cut(s)	585, 1721
Eco47I	GGWCC	1 cut(s)	1280
Eco57I	CTGAAG	1 cut(s)	1496
Eco88I	CYCGRG	1 cut(s)	810
EcoRI	GAATTC	1 cut(s)	232
EcoT14I	CCWWGG	1 cut(s)	1162
EcoT22I	ATGCAT	1 cut(s)	1029
ErhI	CCWWGG	1 cut(s)	1162
FaeI	CATG	6 cut(s)	379, 913, 956, 1166, 1262, 1719
FatI	CATG	6 cut(s)	375, 909, 952, 1162, 1258, 1715
FauI	CCCGC	1 cut(s)	1506
FauNDI	CATATG	1 cut(s)	22
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	4 cut(s)	1112, 1339, 1721, 1770
FokI	GGATG	7 cut(s)	186, 542, 711, 926, 1425, 1794, 1798
Fsp4HI	GCNGC	4 cut(s)	1112, 1339, 1721, 1770
FspBI	CTAG	4 cut(s)	129, 423, 1248, 1275
GlaI	GCGC	1 cut(s)	1756
GluI	GCNGC	4 cut(s)	1112, 1339, 1721, 1770
HaeII	RGCGCY	1 cut(s)	1758
HaeIII	GGCC	3 cut(s)	329, 658, 1803
HhaI	GCGC	1 cut(s)	1757
Hin1I	GRCGYC	1 cut(s)	1154
Hin1II	CATG	6 cut(s)	379, 913, 956, 1166, 1262, 1719
Hin6I	GCGC	1 cut(s)	1755
HinP1I	GCGC	1 cut(s)	1755
HincII	GTYRAC	1 cut(s)	1705
HindII	GTYRAC	1 cut(s)	1705
HindIII	AAGCTT	1 cut(s)	123
HinfI	GANTC	5 cut(s)	65, 239, 551, 617, 835
HphI	GGTGA	8 cut(s)	391, 794, 949, 1097, 1162, 1355, 1408, 1465
Hpy166II	GTNNAC	7 cut(s)	73, 444, 709, 1283, 1290, 1326, 1705
Hpy188I	TCNGA	6 cut(s)	164, 238, 355, 856, 1064, 1666
Hpy188III	TCNNGA	9 cut(s)	62, 85, 248, 812, 1048, 1079, 1371, 1586, 1697
Hpy8I	GTNNAC	7 cut(s)	73, 444, 709, 1283, 1290, 1326, 1705
Hpy99I	CGWCG	1 cut(s)	1506
HpyAV	CCTTC	6 cut(s)	1010, 1076, 1168, 1387, 1462, 1471
HpyCH4III	ACNGT	4 cut(s)	1241, 1287, 1351, 1506
HpyCH4IV	ACGT	7 cut(s)	261, 649, 897, 1074, 1154, 1322, 1701
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 226, 664, 1117, 1717
HpyF3I	CTNAG	7 cut(s)	387, 448, 726, 865, 971, 1463, 1665
HpySE526I	ACGT	7 cut(s)	261, 649, 897, 1074, 1154, 1322, 1701
Hsp92I	GRCGYC	1 cut(s)	1154
Hsp92II	CATG	6 cut(s)	379, 913, 956, 1166, 1262, 1719
HspAI	GCGC	1 cut(s)	1755
LguI	GCTCTTC	1 cut(s)	743
LmnI	GCTCC	2 cut(s)	976, 1471
Lsp1109I	GCAGC	3 cut(s)	1350, 1707, 1756
LweI	GCATC	7 cut(s)	689, 815, 904, 988, 1594, 1756, 1783
MaeI	CTAG	4 cut(s)	129, 423, 1248, 1275
MaeII	ACGT	7 cut(s)	261, 649, 897, 1074, 1154, 1322, 1701
MaeIII	GTNAC	7 cut(s)	195, 308, 782, 1150, 1343, 1488, 1697
MboII	GAAGA	8 cut(s)	449, 546, 574, 577, 760, 1196, 1495, 1831
MfeI	CAATTG	2 cut(s)	1632, 1773
MflI	RGATCY	4 cut(s)	355, 628, 856, 967
MhlI	GDGCHC	2 cut(s)	375, 446
MlsI	TGGCCA	1 cut(s)	1803
MluNI	TGGCCA	1 cut(s)	1803
MlyI	GAGTC	2 cut(s)	248, 626
MmeI	TCCRAC	3 cut(s)	246, 608, 710
Mox20I	TGGCCA	1 cut(s)	1803
Mph1103I	ATGCAT	1 cut(s)	1029
MscI	TGGCCA	1 cut(s)	1803
MseI	TTAA	5 cut(s)	156, 257, 1383, 1446, 1638
MslI	CAYNNNNRTG	1 cut(s)	380
Msp20I	TGGCCA	1 cut(s)	1803
MspA1I	CMGCKG	2 cut(s)	539, 1341
MunI	CAATTG	2 cut(s)	1632, 1773
Mva1269I	GAATGC	1 cut(s)	51
MvnI	CGCG	1 cut(s)	1501
MwoI	GCNNNNNNNGC	5 cut(s)	122, 226, 664, 1117, 1717
NcoI	CCATGG	1 cut(s)	1162
NdeI	CATATG	1 cut(s)	22
NlaIII	CATG	6 cut(s)	379, 913, 956, 1166, 1262, 1719
NlaIV	GGNNCC	2 cut(s)	36, 357
NmeAIII	GCCGAG	1 cut(s)	550
NmuCI	GTSAC	4 cut(s)	782, 1150, 1343, 1697
NsiI	ATGCAT	1 cut(s)	1029
PaeR7I	CTCGAG	1 cut(s)	810
PceI	AGGCCT	1 cut(s)	658
PciSI	GCTCTTC	1 cut(s)	743
PctI	GAATGC	1 cut(s)	51
PfeI	GAWTC	3 cut(s)	65, 551, 835
PkrI	GCNGC	4 cut(s)	1113, 1340, 1722, 1771
Ple19I	CGATCG	1 cut(s)	8
PleI	GAGTC	2 cut(s)	247, 625
PpsI	GAGTC	2 cut(s)	247, 625
Ppu21I	YACGTR	2 cut(s)	898, 1323
PshAI	GACNNNNGTC	1 cut(s)	572
PsiI	TTATAA	1 cut(s)	1416
Psp1406I	AACGTT	1 cut(s)	1074
PspN4I	GGNNCC	2 cut(s)	36, 357
PspPI	GGNCC	1 cut(s)	1280
PstI	CTGCAG	1 cut(s)	1725
PsuI	RGATCY	4 cut(s)	355, 628, 856, 967
PvuI	CGATCG	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	539
RsaI	GTAC	9 cut(s)	108, 418, 453, 535, 896, 1325, 1353, 1601, 1679
RsaNI	GTAC	9 cut(s)	107, 417, 452, 534, 895, 1324, 1352, 1600, 1678
RseI	CAYNNNNRTG	1 cut(s)	380
SapI	GCTCTTC	1 cut(s)	743
SaqAI	TTAA	5 cut(s)	156, 257, 1383, 1446, 1638
SatI	GCNGC	4 cut(s)	1112, 1339, 1721, 1770
Sau96I	GGNCC	1 cut(s)	1280
SchI	GAGTC	2 cut(s)	248, 626
SduI	GDGCHC	2 cut(s)	375, 446
SfaNI	GCATC	7 cut(s)	689, 815, 904, 988, 1594, 1756, 1783
SfcI	CTRYAG	3 cut(s)	983, 1092, 1721
Sfr274I	CTCGAG	1 cut(s)	810
SinI	GGWCC	1 cut(s)	1280
SlaI	CTCGAG	1 cut(s)	810
SmiMI	CAYNNNNRTG	1 cut(s)	380
SmlI	CTYRAG	2 cut(s)	754, 810
SmoI	CTYRAG	2 cut(s)	754, 810
SnaBI	TACGTA	1 cut(s)	1323
SpeI	ACTAGT	1 cut(s)	1247
SseBI	AGGCCT	1 cut(s)	658
SsiI	CCGC	6 cut(s)	420, 667, 917, 1112, 1341, 1499
SspMI	CTAG	4 cut(s)	129, 423, 1248, 1275
StuI	AGGCCT	1 cut(s)	658
StyI	CCWWGG	1 cut(s)	1162
TaaI	ACNGT	4 cut(s)	1241, 1287, 1351, 1506
TaiI	ACGT	7 cut(s)	264, 652, 900, 1077, 1157, 1325, 1704
TaqI	TCGA	7 cut(s)	483, 766, 811, 877, 1047, 1080, 1194
TatI	WGTACW	4 cut(s)	106, 451, 1351, 1677
TauI	GCSGC	1 cut(s)	1114
TfiI	GAWTC	3 cut(s)	65, 551, 835
Tru1I	TTAA	5 cut(s)	156, 257, 1383, 1446, 1638
Tru9I	TTAA	5 cut(s)	156, 257, 1383, 1446, 1638
TscAI	CASTG	1 cut(s)	1113
TseFI	GTSAC	4 cut(s)	782, 1150, 1343, 1697
TseI	GCWGC	3 cut(s)	1338, 1720, 1769
Tsp45I	GTSAC	4 cut(s)	782, 1150, 1343, 1697
TspDTI	ATGAA	9 cut(s)	267, 488, 761, 863, 1275, 1504, 1569, 1583, 1802
TspGWI	ACGGA	2 cut(s)	1047, 1214
TspRI	CASTG	1 cut(s)	1113
VneI	GTGCAC	1 cut(s)	442
VpaK11BI	GGWCC	1 cut(s)	1280
XapI	RAATTY	6 cut(s)	232, 269, 479, 1379, 1562, 1622
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1738
XhoI	CTCGAG	1 cut(s)	810
XmiI	GTMKAC	1 cut(s)	72
XspI	CTAG	4 cut(s)	129, 423, 1248, 1275
ZraI	GACGTC	1 cut(s)	1155
Zsp2I	ATGCAT	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.