Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000027029 RLG00000027032 RLG00000027034 |
| rosa_multiflora | Rmu_sc0002558.1_g000001 Rmu_sc0002558.1_g000006 Rmu_sc0002558.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00286470 Rroxscaffold_4G00286480 |
| rosa_rugosa | Rorug01G0357500 |
| rosa_samantha | Rh1AG365900 Rh1AG366000 Rh1AG366100 Rh1AG366500 Rh1AG366600 Rh1CG342000 Rh1CG342100 Rh1CG342800 Rh1CG343000 Rh1CG344300 |
| rosa_wichuraiana | Rw1G032240 Rw1G032260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 556 |
| AccB1I | GGYRCC | 1 cut(s) | 556 |
| AccII | CGCG | 1 cut(s) | 238 |
| AciI | CCGC | 1 cut(s) | 236 |
| AcsI | RAATTY | 2 cut(s) | 90, 299 |
| AcuI | CTGAAG | 1 cut(s) | 233 |
| AfaI | GTAC | 4 cut(s) | 59, 87, 341, 558 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 541, 542 |
| AflIII | ACRYGT | 1 cut(s) | 760 |
| AgeI | ACCGGT | 1 cut(s) | 410 |
| AgsI | TTSAA | 2 cut(s) | 130, 446 |
| AjiI | CACGTC | 1 cut(s) | 761 |
| AjnI | CCWGG | 1 cut(s) | 535 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 285, 317 |
| AluBI | AGCT | 5 cut(s) | 211, 226, 449, 619, 665 |
| AluI | AGCT | 5 cut(s) | 211, 226, 449, 619, 665 |
| Alw21I | GWGCWC | 1 cut(s) | 621 |
| AoxI | GGCC | 1 cut(s) | 305 |
| ApoI | RAATTY | 2 cut(s) | 90, 299 |
| AsiGI | ACCGGT | 1 cut(s) | 410 |
| Asp718I | GGTACC | 1 cut(s) | 556 |
| AspS9I | GGNCC | 3 cut(s) | 14, 305, 625 |
| AsuHPI | GGTGA | 4 cut(s) | 89, 145, 202, 442 |
| AvaII | GGWCC | 2 cut(s) | 14, 625 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 548, 581 |
| BanI | GGYRCC | 1 cut(s) | 556 |
| BanII | GRGCYC | 1 cut(s) | 621 |
| Bbv12I | GWGCWC | 1 cut(s) | 621 |
| BbvCI | CCTCAGC | 1 cut(s) | 200 |
| BccI | CCATC | 2 cut(s) | 330, 344 |
| BceAI | ACGGC | 1 cut(s) | 292 |
| BciT130I | CCWGG | 1 cut(s) | 537 |
| BfaI | CTAG | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 1 cut(s) | 537 |
| Bme18I | GGWCC | 2 cut(s) | 14, 625 |
| BmgBI | CACGTC | 1 cut(s) | 761 |
| BmgT120I | GGNCC | 3 cut(s) | 14, 305, 625 |
| BmiI | GGNNCC | 1 cut(s) | 558 |
| BmrFI | CCNGG | 1 cut(s) | 537 |
| Bpu10I | CCTNAGC | 1 cut(s) | 200 |
| BpuEI | CTTGAG | 1 cut(s) | 605 |
| BsaAI | YACGTR | 1 cut(s) | 57 |
| BsaBI | GATNNNNATC | 1 cut(s) | 174 |
| BsaJI | CCNNGG | 2 cut(s) | 535, 560 |
| BsaWI | WCCGGW | 1 cut(s) | 410 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 541, 542 |
| Bse118I | RCCGGY | 1 cut(s) | 410 |
| Bse8I | GATNNNNATC | 1 cut(s) | 174 |
| BseBI | CCWGG | 1 cut(s) | 537 |
| BseDI | CCNNGG | 2 cut(s) | 535, 560 |
| BseGI | GGATG | 3 cut(s) | 252, 427, 733 |
| BseJI | GATNNNNATC | 1 cut(s) | 174 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 541, 542 |
| BseMII | CTCAG | 2 cut(s) | 191, 464 |
| BseRI | GAGGAG | 3 cut(s) | 58, 221, 586 |
| Bsh1236I | CGCG | 1 cut(s) | 238 |
| Bsh1285I | CGRYCG | 2 cut(s) | 125, 754 |
| BshFI | GGCC | 1 cut(s) | 307 |
| BshNI | GGYRCC | 1 cut(s) | 556 |
| BshTI | ACCGGT | 1 cut(s) | 410 |
| BsiEI | CGRYCG | 2 cut(s) | 125, 754 |
| BsiHKAI | GWGCWC | 1 cut(s) | 621 |
| BsiSI | CCGG | 1 cut(s) | 411 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 541, 542 |
| BsnI | GGCC | 1 cut(s) | 307 |
| Bsp1286I | GDGCHC | 1 cut(s) | 621 |
| Bsp143I | GATC | 3 cut(s) | 36, 357, 751 |
| BspACI | CCGC | 1 cut(s) | 236 |
| BspANI | GGCC | 1 cut(s) | 307 |
| BspCNI | CTCAG | 2 cut(s) | 192, 463 |
| BspFNI | CGCG | 1 cut(s) | 238 |
| BspLI | GGNNCC | 1 cut(s) | 558 |
| BspT107I | GGYRCC | 1 cut(s) | 556 |
| BsrFI | RCCGGY | 1 cut(s) | 410 |
| BssAI | RCCGGY | 1 cut(s) | 410 |
| BssECI | CCNNGG | 2 cut(s) | 535, 560 |
| BssMI | GATC | 3 cut(s) | 36, 357, 751 |
| Bst2UI | CCWGG | 1 cut(s) | 537 |
| Bst4CI | ACNGT | 5 cut(s) | 21, 85, 123, 163, 382 |
| Bst6I | CTCTTC | 1 cut(s) | 474 |
| BstBAI | YACGTR | 1 cut(s) | 57 |
| BstC8I | GCNNGC | 1 cut(s) | 522 |
| BstDEI | CTNAG | 2 cut(s) | 200, 450 |
| BstF5I | GGATG | 3 cut(s) | 252, 427, 733 |
| BstFNI | CGCG | 1 cut(s) | 238 |
| BstKTI | GATC | 3 cut(s) | 39, 360, 754 |
| BstMBI | GATC | 3 cut(s) | 36, 357, 751 |
| BstMCI | CGRYCG | 2 cut(s) | 125, 754 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 521 |
| BstNI | CCWGG | 1 cut(s) | 537 |
| BstSCI | CCNGG | 1 cut(s) | 535 |
| BstSNI | TACGTA | 1 cut(s) | 57 |
| BstUI | CGCG | 1 cut(s) | 238 |
| BsuRI | GGCC | 1 cut(s) | 307 |
| BtrI | CACGTC | 1 cut(s) | 761 |
| BtsCI | GGATG | 3 cut(s) | 252, 427, 733 |
| BtsI | GCAGTG | 1 cut(s) | 79 |
| BtsIMutI | CAGTG | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 1 cut(s) | 522 |
| Cfr10I | RCCGGY | 1 cut(s) | 410 |
| Cfr13I | GGNCC | 3 cut(s) | 14, 305, 625 |
| Csp6I | GTAC | 4 cut(s) | 58, 86, 340, 557 |
| CspAI | ACCGGT | 1 cut(s) | 410 |
| CviAII | CATG | 2 cut(s) | 629, 681 |
| CviJI | RGCY | 7 cut(s) | 199, 211, 226, 307, 449, 619, 665 |
| CviKI_1 | RGCY | 7 cut(s) | 199, 211, 226, 307, 449, 619, 665 |
| CviQI | GTAC | 4 cut(s) | 58, 86, 340, 557 |
| DdeI | CTNAG | 2 cut(s) | 200, 450 |
| DpnI | GATC | 3 cut(s) | 38, 359, 753 |
| DpnII | GATC | 3 cut(s) | 36, 357, 751 |
| Eam1104I | CTCTTC | 1 cut(s) | 474 |
| EarI | CTCTTC | 1 cut(s) | 474 |
| Ecl136II | GAGCTC | 1 cut(s) | 619 |
| Eco105I | TACGTA | 1 cut(s) | 57 |
| Eco24I | GRGCYC | 1 cut(s) | 621 |
| Eco47I | GGWCC | 2 cut(s) | 14, 625 |
| Eco53kI | GAGCTC | 1 cut(s) | 619 |
| Eco57I | CTGAAG | 1 cut(s) | 233 |
| EcoICRI | GAGCTC | 1 cut(s) | 619 |
| EcoRII | CCWGG | 1 cut(s) | 535 |
| EcoT38I | GRGCYC | 1 cut(s) | 621 |
| FaeI | CATG | 2 cut(s) | 632, 684 |
| FatI | CATG | 2 cut(s) | 628, 680 |
| FauI | CCCGC | 1 cut(s) | 243 |
| FauNDI | CATATG | 1 cut(s) | 68 |
| FokI | GGATG | 3 cut(s) | 239, 434, 740 |
| FriOI | GRGCYC | 1 cut(s) | 621 |
| FspBI | CTAG | 1 cut(s) | 9 |
| HaeIII | GGCC | 1 cut(s) | 307 |
| HapII | CCGG | 1 cut(s) | 411 |
| Hin1II | CATG | 2 cut(s) | 632, 684 |
| HinfI | GANTC | 2 cut(s) | 175, 635 |
| HpaII | CCGG | 1 cut(s) | 411 |
| HphI | GGTGA | 4 cut(s) | 89, 145, 202, 442 |
| Hpy166II | GTNNAC | 3 cut(s) | 17, 24, 60 |
| Hpy188I | TCNGA | 4 cut(s) | 453, 599, 640, 769 |
| Hpy188III | TCNNGA | 4 cut(s) | 40, 105, 326, 743 |
| Hpy8I | GTNNAC | 3 cut(s) | 17, 24, 60 |
| Hpy99I | CGWCG | 1 cut(s) | 762 |
| HpyAV | CCTTC | 4 cut(s) | 208, 427, 469, 607 |
| HpyCH4III | ACNGT | 5 cut(s) | 21, 85, 123, 163, 382 |
| HpyCH4IV | ACGT | 2 cut(s) | 56, 760 |
| HpyCH4V | TGCA | 2 cut(s) | 34, 72 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 521 |
| HpyF3I | CTNAG | 2 cut(s) | 200, 450 |
| HpySE526I | ACGT | 2 cut(s) | 56, 760 |
| Hsp92II | CATG | 2 cut(s) | 632, 684 |
| KpnI | GGTACC | 1 cut(s) | 560 |
| Kzo9I | GATC | 3 cut(s) | 36, 357, 751 |
| LmnI | GCTCC | 3 cut(s) | 208, 529, 616 |
| LpnPI | CCDG | 7 cut(s) | 90, 269, 424, 448, 522, 534, 549 |
| MaeI | CTAG | 1 cut(s) | 9 |
| MaeII | ACGT | 2 cut(s) | 56, 760 |
| MalI | GATC | 3 cut(s) | 38, 359, 753 |
| MboI | GATC | 3 cut(s) | 36, 357, 751 |
| MboII | GAAGA | 4 cut(s) | 232, 302, 359, 491 |
| MfeI | CAATTG | 1 cut(s) | 500 |
| MhlI | GDGCHC | 1 cut(s) | 621 |
| MluCI | AATT | 6 cut(s) | 90, 299, 425, 441, 500, 657 |
| MseI | TTAA | 3 cut(s) | 384, 468, 609 |
| MspI | CCGG | 1 cut(s) | 411 |
| MspR9I | CCNGG | 1 cut(s) | 537 |
| MunI | CAATTG | 1 cut(s) | 500 |
| MvaI | CCWGG | 1 cut(s) | 537 |
| MvnI | CGCG | 1 cut(s) | 238 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 521 |
| NdeI | CATATG | 1 cut(s) | 68 |
| NdeII | GATC | 3 cut(s) | 36, 357, 751 |
| NlaIII | CATG | 2 cut(s) | 632, 684 |
| NlaIV | GGNNCC | 1 cut(s) | 558 |
| PfeI | GAWTC | 2 cut(s) | 175, 635 |
| PinAI | ACCGGT | 1 cut(s) | 410 |
| Ple19I | CGATCG | 1 cut(s) | 754 |
| Ppu21I | YACGTR | 1 cut(s) | 57 |
| Psp124BI | GAGCTC | 1 cut(s) | 621 |
| Psp6I | CCWGG | 1 cut(s) | 535 |
| PspGI | CCWGG | 1 cut(s) | 535 |
| PspN4I | GGNNCC | 1 cut(s) | 558 |
| PspPI | GGNCC | 3 cut(s) | 14, 305, 625 |
| PvuI | CGATCG | 1 cut(s) | 754 |
| RsaI | GTAC | 4 cut(s) | 59, 87, 341, 558 |
| RsaNI | GTAC | 4 cut(s) | 58, 86, 340, 557 |
| SacI | GAGCTC | 1 cut(s) | 621 |
| SaqAI | TTAA | 3 cut(s) | 384, 468, 609 |
| Sau3AI | GATC | 3 cut(s) | 36, 357, 751 |
| Sau96I | GGNCC | 3 cut(s) | 14, 305, 625 |
| ScrFI | CCNGG | 1 cut(s) | 537 |
| SduI | GDGCHC | 1 cut(s) | 621 |
| SinI | GGWCC | 2 cut(s) | 14, 625 |
| SmlI | CTYRAG | 1 cut(s) | 620 |
| SmoI | CTYRAG | 1 cut(s) | 620 |
| SnaBI | TACGTA | 1 cut(s) | 57 |
| Sse9I | AATT | 6 cut(s) | 90, 299, 425, 441, 500, 657 |
| SsiI | CCGC | 1 cut(s) | 236 |
| SspMI | CTAG | 1 cut(s) | 9 |
| SstI | GAGCTC | 1 cut(s) | 621 |
| StyD4I | CCNGG | 1 cut(s) | 535 |
| TaaI | ACNGT | 5 cut(s) | 21, 85, 123, 163, 382 |
| TaiI | ACGT | 2 cut(s) | 59, 763 |
| TaqI | TCGA | 3 cut(s) | 39, 709, 742 |
| TasI | AATT | 6 cut(s) | 90, 299, 425, 441, 500, 657 |
| TatI | WGTACW | 1 cut(s) | 85 |
| TfiI | GAWTC | 2 cut(s) | 175, 635 |
| Tru1I | TTAA | 3 cut(s) | 384, 468, 609 |
| Tru9I | TTAA | 3 cut(s) | 384, 468, 609 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TspDTI | ATGAA | 5 cut(s) | 188, 241, 360, 438, 595 |
| TspGWI | ACGGA | 1 cut(s) | 389 |
| TspRI | CASTG | 1 cut(s) | 79 |
| VpaK11BI | GGWCC | 2 cut(s) | 14, 625 |
| XapI | RAATTY | 2 cut(s) | 90, 299 |
| XspI | CTAG | 1 cut(s) | 9 |