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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000027029 RLG00000027032 RLG00000027034 |
| rosa_multiflora | Rmu_sc0002558.1_g000001 Rmu_sc0002558.1_g000006 Rmu_sc0002558.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00286470 Rroxscaffold_4G00286480 |
| rosa_rugosa | Rorug01G0357500 |
| rosa_samantha | Rh1AG365900 Rh1AG366000 Rh1AG366100 Rh1AG366500 Rh1AG366600 Rh1CG342000 Rh1CG342100 Rh1CG342800 Rh1CG343000 Rh1CG344300 |
| rosa_wichuraiana | Rw1G032240 Rw1G032260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 150 |
| AccII | CGCG | 1 cut(s) | 235 |
| AciI | CCGC | 2 cut(s) | 75, 233 |
| AclWI | GGATC | 1 cut(s) | 307 |
| AcsI | RAATTY | 2 cut(s) | 113, 356 |
| AcuI | CTGAAG | 1 cut(s) | 230 |
| AfaI | GTAC | 4 cut(s) | 59, 87, 335, 392 |
| AgsI | TTSAA | 1 cut(s) | 127 |
| AluBI | AGCT | 2 cut(s) | 196, 208 |
| AluI | AGCT | 2 cut(s) | 196, 208 |
| AlwI | GGATC | 1 cut(s) | 307 |
| ApeKI | GCWGC | 1 cut(s) | 72 |
| ApoI | RAATTY | 2 cut(s) | 113, 356 |
| AspS9I | GGNCC | 1 cut(s) | 14 |
| AsuHPI | GGTGA | 3 cut(s) | 89, 142, 199 |
| AvaII | GGWCC | 1 cut(s) | 14 |
| BbvI | GCAGC | 1 cut(s) | 84 |
| BccI | CCATC | 2 cut(s) | 324, 338 |
| BfaI | CTAG | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 437 |
| BisI | GCNGC | 1 cut(s) | 73 |
| BlsI | GCNGC | 1 cut(s) | 74 |
| Bme18I | GGWCC | 1 cut(s) | 14 |
| BmgT120I | GGNCC | 1 cut(s) | 14 |
| Bpu10I | CCTNAGC | 1 cut(s) | 197 |
| BsaAI | YACGTR | 2 cut(s) | 57, 394 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 206, 236 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseGI | GGATG | 2 cut(s) | 172, 249 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseRI | GAGGAG | 1 cut(s) | 58 |
| BseXI | GCAGC | 1 cut(s) | 84 |
| Bsh1236I | CGCG | 1 cut(s) | 235 |
| BsiWI | CGTACG | 1 cut(s) | 390 |
| Bsp143I | GATC | 1 cut(s) | 312 |
| BspACI | CCGC | 2 cut(s) | 75, 233 |
| BspFNI | CGCG | 1 cut(s) | 235 |
| BspPI | GGATC | 1 cut(s) | 307 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 312 |
| Bst4CI | ACNGT | 3 cut(s) | 21, 85, 240 |
| BstBAI | YACGTR | 2 cut(s) | 57, 394 |
| BstDEI | CTNAG | 1 cut(s) | 197 |
| BstDSI | CCRYGG | 1 cut(s) | 17 |
| BstF5I | GGATG | 2 cut(s) | 172, 249 |
| BstFNI | CGCG | 1 cut(s) | 235 |
| BstKTI | GATC | 1 cut(s) | 315 |
| BstMBI | GATC | 1 cut(s) | 312 |
| BstSFI | CTRYAG | 1 cut(s) | 437 |
| BstSNI | TACGTA | 1 cut(s) | 57 |
| BstUI | CGCG | 1 cut(s) | 235 |
| BstV1I | GCAGC | 1 cut(s) | 84 |
| BtgI | CCRYGG | 1 cut(s) | 17 |
| BtsCI | GGATG | 2 cut(s) | 172, 249 |
| Cfr13I | GGNCC | 1 cut(s) | 14 |
| Csp6I | GTAC | 4 cut(s) | 58, 86, 334, 391 |
| CviJI | RGCY | 3 cut(s) | 196, 208, 435 |
| CviKI_1 | RGCY | 3 cut(s) | 196, 208, 435 |
| CviQI | GTAC | 4 cut(s) | 58, 86, 334, 391 |
| DdeI | CTNAG | 1 cut(s) | 197 |
| DpnI | GATC | 1 cut(s) | 314 |
| DpnII | GATC | 1 cut(s) | 312 |
| DraI | TTTAAA | 1 cut(s) | 181 |
| Eco105I | TACGTA | 1 cut(s) | 57 |
| Eco47I | GGWCC | 1 cut(s) | 14 |
| Eco57I | CTGAAG | 1 cut(s) | 230 |
| FaiI | YATR | 7 cut(s) | 54, 68, 150, 170, 281, 302, 377 |
| FauI | CCCGC | 1 cut(s) | 240 |
| Fnu4HI | GCNGC | 1 cut(s) | 73 |
| FokI | GGATG | 2 cut(s) | 159, 236 |
| Fsp4HI | GCNGC | 1 cut(s) | 73 |
| FspBI | CTAG | 1 cut(s) | 9 |
| GluI | GCNGC | 1 cut(s) | 73 |
| HphI | GGTGA | 3 cut(s) | 89, 142, 199 |
| Hpy166II | GTNNAC | 3 cut(s) | 17, 24, 60 |
| Hpy188III | TCNNGA | 2 cut(s) | 105, 320 |
| Hpy8I | GTNNAC | 3 cut(s) | 17, 24, 60 |
| Hpy99I | CGWCG | 1 cut(s) | 240 |
| HpyAV | CCTTC | 4 cut(s) | 121, 196, 205, 414 |
| HpyCH4III | ACNGT | 3 cut(s) | 21, 85, 240 |
| HpyCH4IV | ACGT | 3 cut(s) | 56, 393, 427 |
| HpyCH4V | TGCA | 1 cut(s) | 34 |
| HpyF3I | CTNAG | 1 cut(s) | 197 |
| HpySE526I | ACGT | 3 cut(s) | 56, 393, 427 |
| Kzo9I | GATC | 1 cut(s) | 312 |
| LmnI | GCTCC | 1 cut(s) | 205 |
| LpnPI | CCDG | 2 cut(s) | 90, 266 |
| Lsp1109I | GCAGC | 1 cut(s) | 84 |
| MaeI | CTAG | 1 cut(s) | 9 |
| MaeII | ACGT | 3 cut(s) | 56, 393, 427 |
| MaeIII | GTNAC | 4 cut(s) | 77, 222, 423, 428 |
| MalI | GATC | 1 cut(s) | 314 |
| MboI | GATC | 1 cut(s) | 312 |
| MboII | GAAGA | 3 cut(s) | 229, 353, 429 |
| MfeI | CAATTG | 1 cut(s) | 366 |
| MluCI | AATT | 5 cut(s) | 90, 113, 304, 356, 366 |
| MnlI | CCTC | 2 cut(s) | 36, 39 |
| MseI | TTAA | 3 cut(s) | 117, 180, 372 |
| MspA1I | CMGCKG | 1 cut(s) | 75 |
| MunI | CAATTG | 1 cut(s) | 366 |
| MvnI | CGCG | 1 cut(s) | 235 |
| NdeII | GATC | 1 cut(s) | 312 |
| NmuCI | GTSAC | 1 cut(s) | 77 |
| Pfl23II | CGTACG | 1 cut(s) | 390 |
| PkrI | GCNGC | 1 cut(s) | 74 |
| Ppu21I | YACGTR | 2 cut(s) | 57, 394 |
| PsiI | TTATAA | 1 cut(s) | 150 |
| PspLI | CGTACG | 1 cut(s) | 390 |
| PspPI | GGNCC | 1 cut(s) | 14 |
| RsaI | GTAC | 4 cut(s) | 59, 87, 335, 392 |
| RsaNI | GTAC | 4 cut(s) | 58, 86, 334, 391 |
| SaqAI | TTAA | 3 cut(s) | 117, 180, 372 |
| SatI | GCNGC | 1 cut(s) | 73 |
| Sau3AI | GATC | 1 cut(s) | 312 |
| Sau96I | GGNCC | 1 cut(s) | 14 |
| SfcI | CTRYAG | 1 cut(s) | 437 |
| SinI | GGWCC | 1 cut(s) | 14 |
| SnaBI | TACGTA | 1 cut(s) | 57 |
| Sse9I | AATT | 5 cut(s) | 90, 113, 304, 356, 366 |
| SsiI | CCGC | 2 cut(s) | 75, 233 |
| SspMI | CTAG | 1 cut(s) | 9 |
| TaaI | ACNGT | 3 cut(s) | 21, 85, 240 |
| TaiI | ACGT | 3 cut(s) | 59, 396, 430 |
| TaqI | TCGA | 1 cut(s) | 354 |
| TasI | AATT | 5 cut(s) | 90, 113, 304, 356, 366 |
| TatI | WGTACW | 1 cut(s) | 85 |
| Tru1I | TTAA | 3 cut(s) | 117, 180, 372 |
| Tru9I | TTAA | 3 cut(s) | 117, 180, 372 |
| TseFI | GTSAC | 1 cut(s) | 77 |
| TseI | GCWGC | 1 cut(s) | 72 |
| Tsp45I | GTSAC | 1 cut(s) | 77 |
| TspDTI | ATGAA | 4 cut(s) | 238, 303, 317, 354 |
| TspGWI | ACGGA | 1 cut(s) | 378 |
| VpaK11BI | GGWCC | 1 cut(s) | 14 |
| XapI | RAATTY | 2 cut(s) | 113, 356 |
| XspI | CTAG | 1 cut(s) | 9 |