Rmu_sc0006144.1_g000007

mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006144.1
OG0005851
Physical Location & Seq
Reverse (-)
22992 .. 31690
8699 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2835 bp
ctgttgcagagtgttttgccaggcattcttcaaggggataaatcagactctcttttatatggttctgttgataatgggaaaaagatatgctggaatgaggattttcattccaaggtggtggaggctgctaaacgccttcatttgaaagaacacacagtccttgatggatctggaaatgttttcaaattagctgcaccagtcgaatgcaagggtattgttggtagtgatgacaggcattatcttcttgacttgatgagagtaactcctcgtgatgcaaacttcactggatctgggtctcgattttgtatcttgagaccagaactaattacttcctattgccaggtccttgatgcagagaaatcaaaatcgaagtctaaatgtgaaggagaggctcaggtcaccgctgatgggccaaacgataaccaggacatcgcacaaaaagagaagaccgttgatgcacaagaaattgtctcaccaccagctgaaagctctgaatcacatgaggaaactcttttcaaccctaatgtcttcactgagtttaagttggctggaaatgcggaggagatagcaacagatgaagaaaatgtgaggaaagccagtttgtatcttactgaggttgttcttccgaagttcatacaagatctttgcacacttgaagtatcacccatggatgggcagacactaactgaagcactccatgctcatggaattaatgttcgttatattggaaaagtggctgatgggaccaggcatttacctcatctttgggatctttgttctaatgagattgtggttagatcagccaagcacattcttaaggatgtcttaagagatacagaggatcatgatattgggcctgcaatctgccatttcttcaactgttttttcggaagctatcaagctgttggctcaaaagtcgctgctaatagttctcagtctagaacccccaaaaaagaacaagcaggtcatcaatctccgggaaaacggtcaaagggacaaggaagatggaaggctggagcttctacaaggaagagtgtatcttcatatatgcatgttagctcagagactctatggtctgacattcaagaatttgccaaactcaaatatgagtttgagttgccaaaggatgctaggatgcatgtaaagaaagattcggttatccgtaatctttgccaaaaggtgggcattacaattgcagctcgcagatatgatctgaaatctgcagcaccttttgaaatatcagatatcttgaatcttcaacctgtagtgaaacactctgttcctgtttgttcagaagctaaggatcttgtggaaacagggaaaatccaattggctgagggaatgttgagtgaagcctacacattattttccgaggcgttttccatacttcagcaggttacaggcccaatgcatcgggaggttgctaactgctgtcggtatcttgcaatggttctatatcatgctggagacatggcgggagccataatgcaacagcacaaggagctaattataaacgagcgttgcctgggtttggaccaccctgacactgctcacagctatgggaatatggctcttttctatcatggacttaaccaaacagaactcgccttacgacatatgtcccgggcattgctcctgttaagtttgtcatctggcccagatcatcctgatgttgcagcaacattcattaatgttgctatgatgtaccaggatcttgggaagatggacactgctcttcgatatttgcaagaggctttgaaaaagaatgaaaggcttctgggcgaggaacatatccaaactgctgtatgctatcatgcacttgctattgcatttaattgtatgggtgccttcaagctctcccaccagcatgagaagaaaacttatgatatacttgtcaaacaactgggtgaggaggattcgaggacacgtgactctcaaaactggatgaagacatttaagttgcgcgagcaacagatgaatgcacaaaagcaaaaaggtcaagctttgaatgccgcttcagctcaaaaggcaatcgacatgttaaaggccaatcctgacttgatgcaggcattccaatctgctgctatagccggcgggtctgggagttccaacacttctgtcaacaaatctcttaatgctgccgcaataatgggtgaaactcttccccgagggaggggagtagatgagagggctaaacgagcagcagccgaaatcaggaagaaggcagcagcgagaggcctcttaatacgtcaacacggtgttccggtccaagctctgcctccactgactcatctcctcaatatcatgagtgcagcaggtggggccccagattcagtggaaaatggagaaaccaatggagcgaaggaaggcaacaaccatccttcaaatggcccagcagatgagaaaactaaccaaccatcattagagccggaaggtcaacctccagttgggttgggcagaggcttagctgcacttgatggcaagaaacaaaagtcgaaagccaaagctgcatcattgaaggttgatgacgtgaaggccatgacgttcaagacagtaaaggacgcagagaagttctattctgcctattccttagcacttggctttggatttaggaaggataccaagggagaggctgaaggggggggatatgagatagtgagatttaccatgaaggacctgtacaacaagctagaccaacaacgacgcaccacttcctttgagagtgactctaaaggcgcacttgcctacatgaacgctctggcagcacaagacccatacttctactgtaggttcaatgtagatgtagaaaacaggttagcaaacatgttgtggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLU CLU_N DUF727 TPR_10 TPR_12 eIF3_p135

Protein Analysis

944

Amino Acids

103.9

Weight (kDa)

7.23

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLU PF13236 3 - 94 6.7e-27 Clustered mitochondria
eIF3_p135 PF12807 220 - 404 2.9e-48 Translation initiation factor eIF3 subunit 135
TPR_12 PF13424 481 - 544 8.4e-09 Tetratricopeptide repeat
TPR_12 PF13424 515 - 587 8.8e-13 Tetratricopeptide repeat
TPR_NPHP3 PF24885 526 - 638 1.2e-11 Nephrocystin-3 TPR domain
TPR_12 PF13424 557 - 630 3.7e-14 Tetratricopeptide repeat
TPR_10 PF13374 558 - 598 6.6e-09 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1511
AarI CACCTGC 1 cut(s) 2306
AasI GACNNNNNNGTC 1 cut(s) 1072
Acc36I ACCTGC 3 cut(s) 953, 1384, 2306
AccB1I GGYRCC 1 cut(s) 1844
AccB7I CCANNNNNTGG 1 cut(s) 1180
AccII CGCG 1 cut(s) 1965
AciI CCGC 6 cut(s) 402, 557, 1475, 2013, 2094, 2142
AclWI GGATC 6 cut(s) 175, 295, 777, 849, 1311, 1719
AcsI RAATTY 1 cut(s) 1088
AcuI CTGAAG 4 cut(s) 708, 1373, 2001, 2655
AcvI CACGTG 1 cut(s) 1928
AfaI GTAC 2 cut(s) 1706, 2681
AflII CTTAAG 2 cut(s) 815, 826
AflIII ACRYGT 3 cut(s) 1925, 2037, 2823
AjiI CACGTC 1 cut(s) 2530
AjnI CCWGG 6 cut(s) 19, 339, 423, 746, 1524, 1707
AjuI GAANNNNNNNTTGG 2 cut(s) 1313, 1345
AloI GAACNNNNNNTCC 4 cut(s) 141, 173, 699, 731
Alw26I GTCTC 5 cut(s) 300, 307, 475, 1058, 1461
AlwI GGATC 6 cut(s) 175, 295, 777, 849, 1311, 1719
Ama87I CYCGRG 2 cut(s) 1623, 2166
AoxI GGCC 9 cut(s) 410, 854, 1402, 1654, 2046, 2236, 2322, 2389, 2535
ApaI GGGCCC 1 cut(s) 2326
ApoI RAATTY 1 cut(s) 1088
ArsI GACNNNNNNTTYG 2 cut(s) 356, 388
AseI ATTAAT 2 cut(s) 711, 1689
Asp700I GAANNNNTTC 2 cut(s) 1773, 2160
AspLEI GCGC 2 cut(s) 1965, 2738
AsuC2I CCSGG 3 cut(s) 978, 1624, 1625
AsuHPI GGTGA 5 cut(s) 391, 465, 654, 1919, 2165
AvaI CYCGRG 2 cut(s) 1623, 2166
AvaII GGWCC 5 cut(s) 343, 744, 1534, 2266, 2674
BaeGI GKGCMC 1 cut(s) 2326
BanI GGYRCC 1 cut(s) 1844
BanII GRGCYC 1 cut(s) 2326
BarI GAAGNNNNNNTAC 2 cut(s) 2663, 2695
BauI CACGAG 1 cut(s) 267
BbrPI CACGTG 1 cut(s) 1928
BbsI GAAGAC 3 cut(s) 452, 520, 1955
BbvCI CCTCAGC 1 cut(s) 1335
BccI CCATC 9 cut(s) 158, 401, 665, 734, 999, 1717, 2385, 2425, 2471
BciT130I CCWGG 6 cut(s) 21, 341, 425, 748, 1526, 1709
BciVI GTATCC 1 cut(s) 2611
BcnI CCSGG 3 cut(s) 978, 1624, 1625
BcoDI GTCTC 5 cut(s) 300, 307, 475, 1058, 1461
BfaI CTAG 3 cut(s) 939, 1131, 2690
BfmI CTRYAG 4 cut(s) 1221, 1263, 2085, 2785
BfrI CTTAAG 2 cut(s) 815, 826
BfuAI ACCTGC 3 cut(s) 953, 1384, 2306
BfuI GTATCC 1 cut(s) 2611
BglII AGATCT 1 cut(s) 640
BlpI GCTNAGC 1 cut(s) 2464
Bme1390I CCNGG 9 cut(s) 21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
Bme18I GGWCC 5 cut(s) 343, 744, 1534, 2266, 2674
BmeT110I CYCGRG 2 cut(s) 1623, 2166
BmgBI CACGTC 1 cut(s) 2530
BmiI GGNNCC 6 cut(s) 745, 1480, 1846, 2323, 2324, 2325
BmrFI CCNGG 9 cut(s) 21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
BmrI ACTGGG 1 cut(s) 1913
BmsI GCATC 8 cut(s) 262, 340, 445, 1117, 1125, 1420, 2052, 2519
BmuI ACTGGG 1 cut(s) 1913
BoxI GACNNNNGTC 1 cut(s) 1618
BpiI GAAGAC 3 cut(s) 452, 520, 1955
BplI GAGNNNNNCTC 4 cut(s) 247, 279, 2711, 2743
BpmI CTGGAG 3 cut(s) 1035, 1485, 2427
Bpu10I CCTNAGC 4 cut(s) 393, 1299, 1335, 2590
Bpu1102I GCTNAGC 1 cut(s) 2464
BpuEI CTTGAG 1 cut(s) 331
BpuMI CCSGG 3 cut(s) 978, 1624, 1625
BsaAI YACGTR 1 cut(s) 1928
BsaI GGTCTC 2 cut(s) 300, 307
BsaJI CCNNGG 7 cut(s) 111, 666, 1371, 1525, 1623, 2167, 2622
BsaWI WCCGGW 1 cut(s) 2263
Bse118I RCCGGY 1 cut(s) 2090
Bse1I ACTGG 6 cut(s) 197, 289, 597, 1908, 1946, 2444
Bse3DI GCAATG 2 cut(s) 1452, 1628
BseBI CCWGG 6 cut(s) 21, 341, 425, 748, 1526, 1709
BseDI CCNNGG 7 cut(s) 111, 666, 1371, 1525, 1623, 2167, 2622
BseGI GGATG 7 cut(s) 676, 826, 1132, 1140, 1663, 1950, 2377
BseMI GCAATG 2 cut(s) 1452, 1628
BseMII CTCAG 6 cut(s) 407, 525, 603, 947, 1074, 1326
BseNI ACTGG 6 cut(s) 197, 289, 597, 1908, 1946, 2444
BseRI GAGGAG 4 cut(s) 255, 575, 1925, 2285
BseSI GKGCMC 1 cut(s) 2326
BseYI CCCAGC 1 cut(s) 2392
BsgI GTGCAG 3 cut(s) 177, 2331, 2454
Bsh1236I CGCG 1 cut(s) 1965
BshFI GGCC 9 cut(s) 412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
BshNI GGYRCC 1 cut(s) 1844
BsiHKCI CYCGRG 2 cut(s) 1623, 2166
BsiSI CCGG 5 cut(s) 977, 1624, 2091, 2264, 2429
BslFI GGGAC 3 cut(s) 757, 1008, 1606
BsmAI GTCTC 5 cut(s) 300, 307, 475, 1058, 1461
BsmFI GGGAC 3 cut(s) 757, 1008, 1606
BsmI GAATGC 5 cut(s) 24, 209, 1984, 2014, 2069
BsnI GGCC 9 cut(s) 412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
Bso31I GGTCTC 2 cut(s) 300, 307
BsoBI CYCGRG 2 cut(s) 1623, 2166
Bsp120I GGGCCC 1 cut(s) 2322
Bsp1286I GDGCHC 1 cut(s) 2326
Bsp1407I TGTACA 1 cut(s) 2679
Bsp1720I GCTNAGC 1 cut(s) 2464
Bsp19I CCATGG 1 cut(s) 666
BspACI CCGC 6 cut(s) 402, 557, 1475, 2013, 2094, 2142
BspANI GGCC 9 cut(s) 412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
BspCNI CTCAG 6 cut(s) 406, 526, 604, 946, 1073, 1327
BspFNI CGCG 1 cut(s) 1965
BspHI TCATGA 2 cut(s) 844, 2304
BspLI GGNNCC 6 cut(s) 745, 1480, 1846, 2323, 2324, 2325
BspMAI CTGCAG 1 cut(s) 1225
BspMI ACCTGC 3 cut(s) 953, 1384, 2306
BspPI GGATC 6 cut(s) 175, 295, 777, 849, 1311, 1719
BspQI GCTCTTC 1 cut(s) 1740
BspT107I GGYRCC 1 cut(s) 1844
BspTI CTTAAG 2 cut(s) 815, 826
BspTNI GGTCTC 2 cut(s) 300, 307
BsrDI GCAATG 2 cut(s) 1452, 1628
BsrFI RCCGGY 1 cut(s) 2090
BsrGI TGTACA 1 cut(s) 2679
BsrI ACTGG 6 cut(s) 197, 289, 597, 1908, 1946, 2444
BssAI RCCGGY 1 cut(s) 2090
BssECI CCNNGG 7 cut(s) 111, 666, 1371, 1525, 1623, 2167, 2622
BssSI CACGAG 1 cut(s) 267
BssT1I CCWWGG 3 cut(s) 111, 666, 2622
Bst2BI CACGAG 1 cut(s) 267
Bst2UI CCWGG 6 cut(s) 21, 341, 425, 748, 1526, 1709
Bst4CI ACNGT 7 cut(s) 157, 451, 881, 987, 2258, 2554, 2786
Bst6I CTCTTC 3 cut(s) 1025, 1740, 2166
BstAFI CTTAAG 2 cut(s) 815, 826
BstAPI GCANNNNNTGC 1 cut(s) 698
BstAUI TGTACA 1 cut(s) 2679
BstBAI YACGTR 1 cut(s) 1928
BstC8I GCNNGC 5 cut(s) 858, 1201, 1967, 2067, 2092
BstDEI CTNAG 9 cut(s) 393, 534, 612, 933, 1060, 1299, 1335, 2464, 2590
BstDSI CCRYGG 1 cut(s) 666
BstEII GGTNACC 1 cut(s) 397
BstF5I GGATG 7 cut(s) 676, 826, 1132, 1140, 1663, 1950, 2377
BstFNI CGCG 1 cut(s) 1965
BstHHI GCGC 2 cut(s) 1965, 2738
BstMAI GTCTC 5 cut(s) 300, 307, 475, 1058, 1461
BstNI CCWGG 6 cut(s) 21, 341, 425, 748, 1526, 1709
BstNSI RCATGY 4 cut(s) 1055, 1142, 2041, 2827
BstPAI GACNNNNGTC 1 cut(s) 1618
BstPI GGTNACC 1 cut(s) 397
BstSCI CCNGG 9 cut(s) 19, 339, 423, 746, 976, 1524, 1622, 1623, 1707
BstSFI CTRYAG 4 cut(s) 1221, 1263, 2085, 2785
BstSLI GKGCMC 1 cut(s) 2326
BstUI CGCG 1 cut(s) 1965
BstV2I GAAGAC 3 cut(s) 452, 520, 1955
BstX2I RGATCY 6 cut(s) 167, 287, 640, 769, 1303, 1711
BstXI CCANNNNNNTGG 3 cut(s) 118, 704, 1715
BstYI RGATCY 6 cut(s) 167, 287, 640, 769, 1303, 1711
BsuI GTATCC 1 cut(s) 2611
BsuRI GGCC 9 cut(s) 412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
BtgI CCRYGG 1 cut(s) 666
BtgZI GCGATG 1 cut(s) 415
BtrI CACGTC 1 cut(s) 2530
BtsCI GGATG 7 cut(s) 676, 826, 1132, 1140, 1663, 1950, 2377
BtsI GCAGTG 2 cut(s) 1545, 1728
BtsIMutI CAGTG 6 cut(s) 282, 531, 1545, 1728, 2282, 2340
BveI ACCTGC 3 cut(s) 953, 1384, 2306
Cac8I GCNNGC 5 cut(s) 858, 1201, 1967, 2067, 2092
CciI TCATGA 2 cut(s) 844, 2304
CfoI GCGC 2 cut(s) 1965, 2738
Cfr10I RCCGGY 1 cut(s) 2090
Cfr9I CCCGGG 1 cut(s) 1623
CseI GACGC 2 cut(s) 2570, 2712
Csp6I GTAC 2 cut(s) 1705, 2680
CspCI CAANNNNNGTGG 2 cut(s) 2698, 2733
CviQI GTAC 2 cut(s) 1705, 2680
DdeI CTNAG 9 cut(s) 393, 534, 612, 933, 1060, 1299, 1335, 2464, 2590
DrdI GACNNNNNNGTC 1 cut(s) 1072
DseDI GACNNNNNNGTC 1 cut(s) 1072
Eam1104I CTCTTC 3 cut(s) 1025, 1740, 2166
EarI CTCTTC 3 cut(s) 1025, 1740, 2166
Eco130I CCWWGG 3 cut(s) 111, 666, 2622
Eco147I AGGCCT 1 cut(s) 2238
Eco24I GRGCYC 1 cut(s) 2326
Eco31I GGTCTC 2 cut(s) 300, 307
Eco32I GATATC 1 cut(s) 1246
Eco47I GGWCC 5 cut(s) 343, 744, 1534, 2266, 2674
Eco57I CTGAAG 4 cut(s) 708, 1373, 2001, 2655
Eco72I CACGTG 1 cut(s) 1928
Eco88I CYCGRG 2 cut(s) 1623, 2166
Eco91I GGTNACC 1 cut(s) 397
EcoO109I RGGNCCY 4 cut(s) 343, 2322, 2323, 2674
EcoO65I GGTNACC 1 cut(s) 397
EcoRII CCWGG 6 cut(s) 19, 339, 423, 746, 1524, 1707
EcoRV GATATC 1 cut(s) 1246
EcoT14I CCWWGG 3 cut(s) 111, 666, 2622
EcoT22I ATGCAT 3 cut(s) 1053, 1140, 1413
EcoT38I GRGCYC 1 cut(s) 2326
ErhI CCWWGG 3 cut(s) 111, 666, 2622
FalI AAGNNNNNCTT 4 cut(s) 809, 841, 2724, 2756
FaqI GGGAC 3 cut(s) 757, 1008, 1606
FauI CCCGC 2 cut(s) 1468, 2087
FauNDI CATATG 1 cut(s) 1617
FokI GGATG 7 cut(s) 683, 833, 1139, 1147, 1650, 1957, 2364
FriOI GRGCYC 1 cut(s) 2326
FspBI CTAG 3 cut(s) 939, 1131, 2690
GlaI GCGC 2 cut(s) 1964, 2737
GsaI CCCAGC 1 cut(s) 2396
GsuI CTGGAG 3 cut(s) 1035, 1485, 2427
HaeIII GGCC 9 cut(s) 412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
HapII CCGG 5 cut(s) 977, 1624, 2091, 2264, 2429
HgaI GACGC 2 cut(s) 2570, 2712
HhaI GCGC 2 cut(s) 1965, 2738
Hin6I GCGC 2 cut(s) 1963, 2736
HinP1I GCGC 2 cut(s) 1963, 2736
HincII GTYRAC 3 cut(s) 2122, 2252, 2438
HindII GTYRAC 3 cut(s) 2122, 2252, 2438
HindIII AAGCTT 1 cut(s) 2001
HpaII CCGG 5 cut(s) 977, 1624, 2091, 2264, 2429
HphI GGTGA 5 cut(s) 391, 465, 654, 1919, 2165
Hpy166II GTNNAC 3 cut(s) 2122, 2252, 2438
Hpy8I GTNNAC 3 cut(s) 2122, 2252, 2438
Hpy99I CGWCG 1 cut(s) 2706
HpyCH4III ACNGT 7 cut(s) 157, 451, 881, 987, 2258, 2554, 2786
HpyCH4IV ACGT 4 cut(s) 1927, 2248, 2529, 2543
HpyF3I CTNAG 9 cut(s) 393, 534, 612, 933, 1060, 1299, 1335, 2464, 2590
HpySE526I ACGT 4 cut(s) 1927, 2248, 2529, 2543
HspAI GCGC 2 cut(s) 1963, 2736
KroI GCCGGC 1 cut(s) 2090
KroNI GCCGGC 1 cut(s) 2092
LguI GCTCTTC 1 cut(s) 1740
LmnI GCTCC 5 cut(s) 1016, 1478, 1501, 1638, 2357
LweI GCATC 8 cut(s) 262, 340, 445, 1117, 1125, 1420, 2052, 2519
MaeI CTAG 3 cut(s) 939, 1131, 2690
MaeII ACGT 4 cut(s) 1927, 2248, 2529, 2543
MaeIII GTNAC 5 cut(s) 259, 397, 1396, 1928, 2723
MfeI CAATTG 2 cut(s) 1191, 1328
MflI RGATCY 6 cut(s) 167, 287, 640, 769, 1303, 1711
MhlI GDGCHC 1 cut(s) 2326
MluCI AATT 9 cut(s) 185, 324, 465, 708, 1088, 1191, 1328, 1506, 1834
MlyI GAGTC 5 cut(s) 41, 1060, 1925, 2281, 2720
MmeI TCCRAC 1 cut(s) 2133
Mph1103I ATGCAT 3 cut(s) 1053, 1140, 1413
MroNI GCCGGC 1 cut(s) 2090
MroXI GAANNNNTTC 2 cut(s) 1773, 2160
MslI CAYNNNNRTG 4 cut(s) 702, 1557, 1668, 1866
MspA1I CMGCKG 2 cut(s) 404, 482
MspCI CTTAAG 2 cut(s) 815, 826
MspI CCGG 5 cut(s) 977, 1624, 2091, 2264, 2429
MspR9I CCNGG 9 cut(s) 21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
MunI CAATTG 2 cut(s) 1191, 1328
Mva1269I GAATGC 5 cut(s) 24, 209, 1984, 2014, 2069
MvaI CCWGG 6 cut(s) 21, 341, 425, 748, 1526, 1709
MvnI CGCG 1 cut(s) 1965
NaeI GCCGGC 1 cut(s) 2092
NciI CCSGG 3 cut(s) 978, 1624, 1625
NcoI CCATGG 1 cut(s) 666
NdeI CATATG 1 cut(s) 1617
NgoMIV GCCGGC 1 cut(s) 2090
NlaIV GGNNCC 6 cut(s) 745, 1480, 1846, 2323, 2324, 2325
NmuCI GTSAC 3 cut(s) 397, 1928, 2723
NsiI ATGCAT 3 cut(s) 1053, 1140, 1413
NspI RCATGY 4 cut(s) 1055, 1142, 2041, 2827
PagI TCATGA 2 cut(s) 844, 2304
PaqCI CACCTGC 1 cut(s) 2306
PceI AGGCCT 1 cut(s) 2238
PciI ACATGT 2 cut(s) 2037, 2823
PciSI GCTCTTC 1 cut(s) 1740
PctI GAATGC 5 cut(s) 24, 209, 1984, 2014, 2069
PdiI GCCGGC 1 cut(s) 2092
PdmI GAANNNNTTC 2 cut(s) 1773, 2160
PfeI GAWTC 5 cut(s) 494, 1151, 1252, 1916, 2330
PflMI CCANNNNNTGG 1 cut(s) 1180
PfoI TCCNGGA 1 cut(s) 976
PleI GAGTC 5 cut(s) 41, 1060, 1925, 2281, 2720
PmaCI CACGTG 1 cut(s) 1928
PmlI CACGTG 1 cut(s) 1928
PpsI GAGTC 5 cut(s) 41, 1060, 1925, 2281, 2720
Ppu21I YACGTR 1 cut(s) 1928
PpuMI RGGWCCY 2 cut(s) 343, 2674
PscI ACATGT 2 cut(s) 2037, 2823
PshAI GACNNNNGTC 1 cut(s) 1618
PshBI ATTAAT 2 cut(s) 711, 1689
PsiI TTATAA 1 cut(s) 1511
Psp5II RGGWCCY 2 cut(s) 343, 2674
Psp6I CCWGG 6 cut(s) 19, 339, 423, 746, 1524, 1707
PspCI CACGTG 1 cut(s) 1928
PspEI GGTNACC 1 cut(s) 397
PspFI CCCAGC 1 cut(s) 2392
PspGI CCWGG 6 cut(s) 19, 339, 423, 746, 1524, 1707
PspN4I GGNNCC 6 cut(s) 745, 1480, 1846, 2323, 2324, 2325
PspOMI GGGCCC 1 cut(s) 2322
PspPPI RGGWCCY 2 cut(s) 343, 2674
PsrI GAACNNNNNNTAC 2 cut(s) 1593, 1625
PstI CTGCAG 1 cut(s) 1225
PsuI RGATCY 6 cut(s) 167, 287, 640, 769, 1303, 1711
PvuII CAGCTG 1 cut(s) 482
RsaI GTAC 2 cut(s) 1706, 2681
RsaNI GTAC 2 cut(s) 1705, 2680
RseI CAYNNNNRTG 4 cut(s) 702, 1557, 1668, 1866
SapI GCTCTTC 1 cut(s) 1740
SchI GAGTC 5 cut(s) 41, 1060, 1925, 2281, 2720
ScrFI CCNGG 9 cut(s) 21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
SduI GDGCHC 1 cut(s) 2326
SfaNI GCATC 8 cut(s) 262, 340, 445, 1117, 1125, 1420, 2052, 2519
SfcI CTRYAG 4 cut(s) 1221, 1263, 2085, 2785
SinI GGWCC 5 cut(s) 343, 744, 1534, 2266, 2674
SmaI CCCGGG 1 cut(s) 1625
SmiMI CAYNNNNRTG 4 cut(s) 702, 1557, 1668, 1866
SmlI CTYRAG 3 cut(s) 310, 815, 826
SmoI CTYRAG 3 cut(s) 310, 815, 826
Sse9I AATT 9 cut(s) 185, 324, 465, 708, 1088, 1191, 1328, 1506, 1834
SseBI AGGCCT 1 cut(s) 2238
SsiI CCGC 6 cut(s) 402, 557, 1475, 2013, 2094, 2142
SspMI CTAG 3 cut(s) 939, 1131, 2690
StuI AGGCCT 1 cut(s) 2238
StyD4I CCNGG 9 cut(s) 19, 339, 423, 746, 976, 1524, 1622, 1623, 1707
StyI CCWWGG 3 cut(s) 111, 666, 2622
TaaI ACNGT 7 cut(s) 157, 451, 881, 987, 2258, 2554, 2786
TaiI ACGT 4 cut(s) 1930, 2251, 2532, 2546
TaqI TCGA 7 cut(s) 201, 298, 368, 1738, 1919, 2034, 2495
TasI AATT 9 cut(s) 185, 324, 465, 708, 1088, 1191, 1328, 1506, 1834
TatI WGTACW 1 cut(s) 2679
TauI GCSGC 2 cut(s) 2015, 2144
TfiI GAWTC 5 cut(s) 494, 1151, 1252, 1916, 2330
TscAI CASTG 6 cut(s) 289, 538, 1552, 1735, 2289, 2340
TseFI GTSAC 3 cut(s) 397, 1928, 2723
Tsp45I GTSAC 3 cut(s) 397, 1928, 2723
TspGWI ACGGA 1 cut(s) 1151
TspMI CCCGGG 1 cut(s) 1623
TspRI CASTG 6 cut(s) 289, 538, 1552, 1735, 2289, 2340
Van91I CCANNNNNTGG 1 cut(s) 1180
Vha464I CTTAAG 2 cut(s) 815, 826
VpaK11BI GGWCC 5 cut(s) 343, 744, 1534, 2266, 2674
VspI ATTAAT 2 cut(s) 711, 1689
XapI RAATTY 1 cut(s) 1088
XbaI TCTAGA 1 cut(s) 938
XceI RCATGY 4 cut(s) 1055, 1142, 2041, 2827
XcmI CCANNNNNNNNNTGG 1 cut(s) 2384
XmaI CCCGGG 1 cut(s) 1623
XmnI GAANNNNTTC 2 cut(s) 1773, 2160
XspI CTAG 3 cut(s) 939, 1131, 2690
Zsp2I ATGCAT 3 cut(s) 1053, 1140, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.