Rmu_sc0006144.1_g000008

mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006144.1
OG0005851
Physical Location & Seq
Forward (+)
31786 .. 38445
6660 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2601 bp
atggatcctttatgttgtgtacaaaagaccagatctccagctgagcaattaaaaccagtactcaaaggcatatattgcagtggaaagaaggataggagacacaaactcaggctcttatgtcatcaatcagactctcttttatatggttctgttgataatgggaaaaagatatgctggaatgaggattttcattccaaggtggtggaggctgctaaacgccttcatttgaaagaacacacagtccttgatggatctggaaatgttttcaaattagctgcaccagtcgaatgcaagggtattgttggtagtgatgacaggcattatcttcttgacttgatgagagtaactcctcgtgatgcaaacttcactggatctgggtctcgattttgtatcttgagaccagaactaattacttcctattgccaggtccttgatgcagagaaatcaaaatcgaagtctaaatgtgaaggagaggctcaggtcaccgctgatgggccaaacgataaccaggacatcgcacaaaaagagaagaccgttgatgcacaagaaattgtctcaccaccagctgaaagctctgaatcacatgaggaaactcttttcaaccctaatgtcttcactgagtttaagttggctggaaatgcggaggagatagcaacagatgaagaaaatgtgaggaaagccagtttgtatcttactgaggttgttcttccgaagttcatacaagatctttgcacacttgaagtatcacccatggatgggcagacactaactgaagcactccatgctcatggaattaatgttcgttatattggaaaagtggctgatgggaccaggcatttacctcatctttgggatctttgttctaatgagattgtggttagatcagccaagcacattcttaaggatgtcttaagagatacagaggatcatgatattgggcctgcaatctgccatttcttcaactgttttttcggaagctatcaagctgttggctcaaaagtcgctgctaatagttctcagtctagaacccccaaaaaagaacaagcaggtcatcaatctccgggaaaacggtcaaagggacaaggaagatggaaggctggagcttctacaaggaagagtgtatcttcatatatgcatgttagctcagagactctatggtctgacattcaagaatttgccaaactcaaatatgagtttgagttgccaaaggatgctaggatgcatgtaaagaaagattcggttatccgtaatctttgccaaaaggtgggcattacaattgcagctcgcagatatgatctgaaatctgcagcaccttttgaaatatcagatatcttgaatcttcaacctgtagtgaaacactctgttcctgtttgttcagaagctaaggatcttgtggaaacagggaaaatccaattggctgagggaatgttgagtgaagcctacacattattttccgaggcgttttccatacttcagcaggttacaggcccaatgcatcgggaggttgctaactgctgtcggtatcttgcaatggttctatatcatgctggagacatggcgggagccataatgcaacagcacaaggagctaattataaacgagcgttgcctgggtttggaccaccctgacactgctcacagctatgggaatatggctcttttctatcatggacttaaccaaacagaactcgccttacgacatatgtcccgggcattgctcctgttaagtttgtcatctggcccagatcatcctgatgttgcagcaacattcattaatgttgctatgatgtaccaggatcttgggaagatggacactgctcttcgatatttgcaagaggctttgaaaaagaatgaaaggcttctgggcgaggaacatatccaaactgctgtatgctatcatgcacttgctattgcatttaattgtatgggtgccttcaagctctcccaccagcatgagaagaaaacttatgatatacttgtcaaacaactgggtgaggaggattcgaggacacgtgactctcaaaactggatgaagacatttaagttgcgcgagcaacagatgaatgcacaaaagcaaaaaggtcaagctttgaatgccgcttcagctcaaaaggcaatcgacatgttaaaggccaatcctgacttgatgcaggcattccaatctgctgctatagccggcgggtctgggagttccaacacttctgtcaacaaatctcttaatgctgccgcaataatgggtgaaactcttccccgagggaggggagtagatgagagggctaaacgagcagcagccgaaatcaggaagaaggcagcagcgagaggcctcttaatacgtcaacacggtgttccggtccaagctctgcctccactgactcatctcctcaatatcatgagtgcagcaggtggggccccagattcagtggaaaatggagaaaccaatggagcgaaggaaggcaacaaccatccttcaaatggcccagcagatgcgaaaactaaccaaccatcattagagccggaaggtcaacctccagttgggttgggcagaggcttagctgcactggatggcaagaaacaaaagtcgaaagccaaagctgcatcgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLU CLU_N DUF727 TPR_10 TPR_12 eIF3_p135

Protein Analysis

866

Amino Acids

95.08

Weight (kDa)

8.32

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLU PF13236 43 - 122 2.4e-23 Clustered mitochondria
eIF3_p135 PF12807 248 - 432 2.5e-48 Translation initiation factor eIF3 subunit 135
TPR_12 PF13424 509 - 572 6.6e-09 Tetratricopeptide repeat
TPR_12 PF13424 548 - 597 5.7e-06 Tetratricopeptide repeat
TPR_NPHP3 PF24885 554 - 666 1.1e-11 Nephrocystin-3 TPR domain
TPR_12 PF13424 585 - 658 3.4e-14 Tetratricopeptide repeat
TPR_10 PF13374 586 - 626 6e-09 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1595
AarI CACCTGC 1 cut(s) 2390
AasI GACNNNNNNGTC 1 cut(s) 1156
Acc36I ACCTGC 3 cut(s) 1037, 1468, 2390
AccB1I GGYRCC 1 cut(s) 1928
AccB7I CCANNNNNTGG 1 cut(s) 1264
AccII CGCG 1 cut(s) 2049
AciI CCGC 6 cut(s) 486, 641, 1559, 2097, 2178, 2226
AclWI GGATC 7 cut(s) 12, 259, 379, 861, 933, 1395, 1803
AcsI RAATTY 1 cut(s) 1172
AcuI CTGAAG 3 cut(s) 792, 1457, 2085
AcvI CACGTG 1 cut(s) 2012
AfaI GTAC 3 cut(s) 21, 60, 1790
AflII CTTAAG 2 cut(s) 899, 910
AflIII ACRYGT 2 cut(s) 2009, 2121
AjnI CCWGG 5 cut(s) 423, 507, 830, 1608, 1791
AjuI GAANNNNNNNTTGG 2 cut(s) 1397, 1429
AloI GAACNNNNNNTCC 4 cut(s) 225, 257, 783, 815
Alw26I GTCTC 6 cut(s) 91, 384, 391, 559, 1142, 1545
AlwI GGATC 7 cut(s) 12, 259, 379, 861, 933, 1395, 1803
Ama87I CYCGRG 2 cut(s) 1707, 2250
AoxI GGCC 8 cut(s) 494, 938, 1486, 1738, 2130, 2320, 2406, 2473
ApaI GGGCCC 1 cut(s) 2410
ApoI RAATTY 1 cut(s) 1172
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
AseI ATTAAT 2 cut(s) 795, 1773
Asp700I GAANNNNTTC 2 cut(s) 1857, 2244
AspLEI GCGC 1 cut(s) 2049
AsuC2I CCSGG 3 cut(s) 1062, 1708, 1709
AsuHPI GGTGA 5 cut(s) 475, 549, 738, 2003, 2249
AvaI CYCGRG 2 cut(s) 1707, 2250
AvaII GGWCC 4 cut(s) 427, 828, 1618, 2350
BaeGI GKGCMC 1 cut(s) 2410
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1928
BanII GRGCYC 1 cut(s) 2410
BauI CACGAG 1 cut(s) 351
BbrPI CACGTG 1 cut(s) 2012
BbsI GAAGAC 3 cut(s) 536, 604, 2039
BbvCI CCTCAGC 1 cut(s) 1419
BccI CCATC 9 cut(s) 242, 485, 749, 818, 1083, 1801, 2469, 2509, 2555
BciT130I CCWGG 5 cut(s) 425, 509, 832, 1610, 1793
BcnI CCSGG 3 cut(s) 1062, 1708, 1709
BcoDI GTCTC 6 cut(s) 91, 384, 391, 559, 1142, 1545
BfaI CTAG 2 cut(s) 1023, 1215
BfmI CTRYAG 3 cut(s) 1305, 1347, 2169
BfrI CTTAAG 2 cut(s) 899, 910
BfuAI ACCTGC 3 cut(s) 1037, 1468, 2390
BglII AGATCT 2 cut(s) 32, 724
BlpI GCTNAGC 2 cut(s) 42, 2548
BmcAI AGTACT 1 cut(s) 60
Bme1390I CCNGG 8 cut(s) 425, 509, 832, 1062, 1610, 1708, 1709, 1793
Bme18I GGWCC 4 cut(s) 427, 828, 1618, 2350
BmeT110I CYCGRG 2 cut(s) 1707, 2250
BmiI GGNNCC 7 cut(s) 6, 829, 1564, 1930, 2407, 2408, 2409
BmrFI CCNGG 8 cut(s) 425, 509, 832, 1062, 1610, 1708, 1709, 1793
BmrI ACTGGG 1 cut(s) 1997
BmsI GCATC 8 cut(s) 346, 424, 529, 1201, 1209, 1504, 2136, 2473
BmuI ACTGGG 1 cut(s) 1997
BoxI GACNNNNGTC 1 cut(s) 1702
BpiI GAAGAC 3 cut(s) 536, 604, 2039
BplI GAGNNNNNCTC 2 cut(s) 331, 363
BpmI CTGGAG 4 cut(s) 21, 1119, 1569, 2511
Bpu10I CCTNAGC 3 cut(s) 477, 1383, 1419
Bpu1102I GCTNAGC 2 cut(s) 42, 2548
BpuEI CTTGAG 1 cut(s) 415
BpuMI CCSGG 3 cut(s) 1062, 1708, 1709
BsaAI YACGTR 1 cut(s) 2012
BsaI GGTCTC 2 cut(s) 384, 391
BsaJI CCNNGG 6 cut(s) 195, 750, 1455, 1609, 1707, 2251
BsaWI WCCGGW 1 cut(s) 2347
BsaXI ACNNNNNCTCC 2 cut(s) 19, 49
Bse118I RCCGGY 1 cut(s) 2174
Bse1I ACTGG 8 cut(s) 56, 281, 373, 681, 1992, 2030, 2528, 2562
Bse3DI GCAATG 2 cut(s) 1536, 1712
BseBI CCWGG 5 cut(s) 425, 509, 832, 1610, 1793
BseDI CCNNGG 6 cut(s) 195, 750, 1455, 1609, 1707, 2251
BseGI GGATG 8 cut(s) 760, 910, 1216, 1224, 1747, 2034, 2461, 2566
BseMI GCAATG 2 cut(s) 1536, 1712
BseMII CTCAG 8 cut(s) 33, 121, 491, 609, 687, 1031, 1158, 1410
BseNI ACTGG 8 cut(s) 56, 281, 373, 681, 1992, 2030, 2528, 2562
BseRI GAGGAG 4 cut(s) 339, 659, 2009, 2369
BseSI GKGCMC 1 cut(s) 2410
BseYI CCCAGC 1 cut(s) 2476
BsgI GTGCAG 3 cut(s) 261, 2415, 2538
Bsh1236I CGCG 1 cut(s) 2049
BshFI GGCC 8 cut(s) 496, 940, 1488, 1740, 2132, 2322, 2408, 2475
BshNI GGYRCC 1 cut(s) 1928
BsiHKCI CYCGRG 2 cut(s) 1707, 2250
BsiSI CCGG 5 cut(s) 1061, 1708, 2175, 2348, 2513
BslFI GGGAC 3 cut(s) 841, 1092, 1690
BsmAI GTCTC 6 cut(s) 91, 384, 391, 559, 1142, 1545
BsmFI GGGAC 3 cut(s) 841, 1092, 1690
BsmI GAATGC 4 cut(s) 293, 2068, 2098, 2153
BsnI GGCC 8 cut(s) 496, 940, 1488, 1740, 2132, 2322, 2408, 2475
Bso31I GGTCTC 2 cut(s) 384, 391
BsoBI CYCGRG 2 cut(s) 1707, 2250
Bsp120I GGGCCC 1 cut(s) 2406
Bsp1286I GDGCHC 1 cut(s) 2410
Bsp1407I TGTACA 1 cut(s) 19
Bsp1720I GCTNAGC 2 cut(s) 42, 2548
Bsp19I CCATGG 1 cut(s) 750
BspACI CCGC 6 cut(s) 486, 641, 1559, 2097, 2178, 2226
BspANI GGCC 8 cut(s) 496, 940, 1488, 1740, 2132, 2322, 2408, 2475
BspCNI CTCAG 8 cut(s) 34, 120, 490, 610, 688, 1030, 1157, 1411
BspFNI CGCG 1 cut(s) 2049
BspHI TCATGA 2 cut(s) 928, 2388
BspLI GGNNCC 7 cut(s) 6, 829, 1564, 1930, 2407, 2408, 2409
BspMAI CTGCAG 1 cut(s) 1309
BspMI ACCTGC 3 cut(s) 1037, 1468, 2390
BspPI GGATC 7 cut(s) 12, 259, 379, 861, 933, 1395, 1803
BspQI GCTCTTC 1 cut(s) 1824
BspT107I GGYRCC 1 cut(s) 1928
BspTI CTTAAG 2 cut(s) 899, 910
BspTNI GGTCTC 2 cut(s) 384, 391
BsrDI GCAATG 2 cut(s) 1536, 1712
BsrFI RCCGGY 1 cut(s) 2174
BsrGI TGTACA 1 cut(s) 19
BsrI ACTGG 8 cut(s) 56, 281, 373, 681, 1992, 2030, 2528, 2562
BssAI RCCGGY 1 cut(s) 2174
BssECI CCNNGG 6 cut(s) 195, 750, 1455, 1609, 1707, 2251
BssSI CACGAG 1 cut(s) 351
BssT1I CCWWGG 2 cut(s) 195, 750
Bst2BI CACGAG 1 cut(s) 351
Bst2UI CCWGG 5 cut(s) 425, 509, 832, 1610, 1793
Bst4CI ACNGT 5 cut(s) 241, 535, 965, 1071, 2342
Bst6I CTCTTC 3 cut(s) 1109, 1824, 2250
BstAFI CTTAAG 2 cut(s) 899, 910
BstAPI GCANNNNNTGC 2 cut(s) 75, 782
BstAUI TGTACA 1 cut(s) 19
BstBAI YACGTR 1 cut(s) 2012
BstC8I GCNNGC 5 cut(s) 942, 1285, 2051, 2151, 2176
BstDSI CCRYGG 1 cut(s) 750
BstEII GGTNACC 1 cut(s) 481
BstF5I GGATG 8 cut(s) 760, 910, 1216, 1224, 1747, 2034, 2461, 2566
BstFNI CGCG 1 cut(s) 2049
BstHHI GCGC 1 cut(s) 2049
BstMAI GTCTC 6 cut(s) 91, 384, 391, 559, 1142, 1545
BstNI CCWGG 5 cut(s) 425, 509, 832, 1610, 1793
BstNSI RCATGY 3 cut(s) 1139, 1226, 2125
BstPAI GACNNNNGTC 1 cut(s) 1702
BstPI GGTNACC 1 cut(s) 481
BstSCI CCNGG 8 cut(s) 423, 507, 830, 1060, 1608, 1706, 1707, 1791
BstSFI CTRYAG 3 cut(s) 1305, 1347, 2169
BstSLI GKGCMC 1 cut(s) 2410
BstUI CGCG 1 cut(s) 2049
BstV2I GAAGAC 3 cut(s) 536, 604, 2039
BstX2I RGATCY 8 cut(s) 4, 32, 251, 371, 724, 853, 1387, 1795
BstXI CCANNNNNNTGG 3 cut(s) 202, 788, 1799
BstYI RGATCY 8 cut(s) 4, 32, 251, 371, 724, 853, 1387, 1795
BsuRI GGCC 8 cut(s) 496, 940, 1488, 1740, 2132, 2322, 2408, 2475
BtgI CCRYGG 1 cut(s) 750
BtgZI GCGATG 1 cut(s) 499
BtsCI GGATG 8 cut(s) 760, 910, 1216, 1224, 1747, 2034, 2461, 2566
BtsI GCAGTG 3 cut(s) 85, 1629, 1812
BtsIMutI CAGTG 8 cut(s) 85, 366, 615, 1629, 1812, 2366, 2424, 2555
BveI ACCTGC 3 cut(s) 1037, 1468, 2390
Cac8I GCNNGC 5 cut(s) 942, 1285, 2051, 2151, 2176
CciI TCATGA 2 cut(s) 928, 2388
CfoI GCGC 1 cut(s) 2049
Cfr10I RCCGGY 1 cut(s) 2174
Cfr9I CCCGGG 1 cut(s) 1707
Csp6I GTAC 3 cut(s) 20, 59, 1789
CviQI GTAC 3 cut(s) 20, 59, 1789
DrdI GACNNNNNNGTC 1 cut(s) 1156
DseDI GACNNNNNNGTC 1 cut(s) 1156
Eam1104I CTCTTC 3 cut(s) 1109, 1824, 2250
EarI CTCTTC 3 cut(s) 1109, 1824, 2250
Eco130I CCWWGG 2 cut(s) 195, 750
Eco147I AGGCCT 1 cut(s) 2322
Eco24I GRGCYC 1 cut(s) 2410
Eco31I GGTCTC 2 cut(s) 384, 391
Eco32I GATATC 1 cut(s) 1330
Eco47I GGWCC 4 cut(s) 427, 828, 1618, 2350
Eco57I CTGAAG 3 cut(s) 792, 1457, 2085
Eco72I CACGTG 1 cut(s) 2012
Eco88I CYCGRG 2 cut(s) 1707, 2250
Eco91I GGTNACC 1 cut(s) 481
EcoO109I RGGNCCY 3 cut(s) 427, 2406, 2407
EcoO65I GGTNACC 1 cut(s) 481
EcoRII CCWGG 5 cut(s) 423, 507, 830, 1608, 1791
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 2 cut(s) 195, 750
EcoT22I ATGCAT 3 cut(s) 1137, 1224, 1497
EcoT38I GRGCYC 1 cut(s) 2410
ErhI CCWWGG 2 cut(s) 195, 750
FalI AAGNNNNNCTT 2 cut(s) 893, 925
FaqI GGGAC 3 cut(s) 841, 1092, 1690
FauI CCCGC 2 cut(s) 1552, 2171
FauNDI CATATG 1 cut(s) 1701
FokI GGATG 8 cut(s) 767, 917, 1223, 1231, 1734, 2041, 2448, 2573
FriOI GRGCYC 1 cut(s) 2410
FspBI CTAG 2 cut(s) 1023, 1215
GlaI GCGC 1 cut(s) 2048
GsaI CCCAGC 1 cut(s) 2480
GsuI CTGGAG 4 cut(s) 21, 1119, 1569, 2511
HaeIII GGCC 8 cut(s) 496, 940, 1488, 1740, 2132, 2322, 2408, 2475
HapII CCGG 5 cut(s) 1061, 1708, 2175, 2348, 2513
HhaI GCGC 1 cut(s) 2049
Hin6I GCGC 1 cut(s) 2047
HinP1I GCGC 1 cut(s) 2047
HincII GTYRAC 3 cut(s) 2206, 2336, 2522
HindII GTYRAC 3 cut(s) 2206, 2336, 2522
HindIII AAGCTT 1 cut(s) 2085
HinfI GANTC 9 cut(s) 131, 578, 1150, 1235, 1336, 2000, 2015, 2371, 2414
HpaII CCGG 5 cut(s) 1061, 1708, 2175, 2348, 2513
HphI GGTGA 5 cut(s) 475, 549, 738, 2003, 2249
Hpy166II GTNNAC 4 cut(s) 20, 2206, 2336, 2522
Hpy8I GTNNAC 4 cut(s) 20, 2206, 2336, 2522
HpyCH4III ACNGT 5 cut(s) 241, 535, 965, 1071, 2342
HpyCH4IV ACGT 2 cut(s) 2011, 2332
HpySE526I ACGT 2 cut(s) 2011, 2332
HspAI GCGC 1 cut(s) 2047
KroI GCCGGC 1 cut(s) 2174
KroNI GCCGGC 1 cut(s) 2176
LguI GCTCTTC 1 cut(s) 1824
LmnI GCTCC 5 cut(s) 1100, 1562, 1585, 1722, 2441
LweI GCATC 8 cut(s) 346, 424, 529, 1201, 1209, 1504, 2136, 2473
MaeI CTAG 2 cut(s) 1023, 1215
MaeII ACGT 2 cut(s) 2011, 2332
MaeIII GTNAC 4 cut(s) 343, 481, 1480, 2012
MfeI CAATTG 2 cut(s) 1275, 1412
MflI RGATCY 8 cut(s) 4, 32, 251, 371, 724, 853, 1387, 1795
MhlI GDGCHC 1 cut(s) 2410
MlyI GAGTC 4 cut(s) 125, 1144, 2009, 2365
MmeI TCCRAC 1 cut(s) 2217
Mph1103I ATGCAT 3 cut(s) 1137, 1224, 1497
MroNI GCCGGC 1 cut(s) 2174
MroXI GAANNNNTTC 2 cut(s) 1857, 2244
MslI CAYNNNNRTG 4 cut(s) 786, 1641, 1752, 1950
MspA1I CMGCKG 3 cut(s) 41, 488, 566
MspCI CTTAAG 2 cut(s) 899, 910
MspI CCGG 5 cut(s) 1061, 1708, 2175, 2348, 2513
MspR9I CCNGG 8 cut(s) 425, 509, 832, 1062, 1610, 1708, 1709, 1793
MunI CAATTG 2 cut(s) 1275, 1412
Mva1269I GAATGC 4 cut(s) 293, 2068, 2098, 2153
MvaI CCWGG 5 cut(s) 425, 509, 832, 1610, 1793
MvnI CGCG 1 cut(s) 2049
NaeI GCCGGC 1 cut(s) 2176
NciI CCSGG 3 cut(s) 1062, 1708, 1709
NcoI CCATGG 1 cut(s) 750
NdeI CATATG 1 cut(s) 1701
NgoMIV GCCGGC 1 cut(s) 2174
NlaIV GGNNCC 7 cut(s) 6, 829, 1564, 1930, 2407, 2408, 2409
NmuCI GTSAC 2 cut(s) 481, 2012
NsiI ATGCAT 3 cut(s) 1137, 1224, 1497
NspI RCATGY 3 cut(s) 1139, 1226, 2125
PagI TCATGA 2 cut(s) 928, 2388
PaqCI CACCTGC 1 cut(s) 2390
PceI AGGCCT 1 cut(s) 2322
PciI ACATGT 1 cut(s) 2121
PciSI GCTCTTC 1 cut(s) 1824
PctI GAATGC 4 cut(s) 293, 2068, 2098, 2153
PdiI GCCGGC 1 cut(s) 2176
PdmI GAANNNNTTC 2 cut(s) 1857, 2244
PfeI GAWTC 5 cut(s) 578, 1235, 1336, 2000, 2414
PflMI CCANNNNNTGG 1 cut(s) 1264
PfoI TCCNGGA 1 cut(s) 1060
PleI GAGTC 4 cut(s) 125, 1144, 2009, 2365
PmaCI CACGTG 1 cut(s) 2012
PmlI CACGTG 1 cut(s) 2012
PpsI GAGTC 4 cut(s) 125, 1144, 2009, 2365
Ppu21I YACGTR 1 cut(s) 2012
PpuMI RGGWCCY 1 cut(s) 427
PscI ACATGT 1 cut(s) 2121
PshAI GACNNNNGTC 1 cut(s) 1702
PshBI ATTAAT 2 cut(s) 795, 1773
PsiI TTATAA 1 cut(s) 1595
Psp5II RGGWCCY 1 cut(s) 427
Psp6I CCWGG 5 cut(s) 423, 507, 830, 1608, 1791
PspCI CACGTG 1 cut(s) 2012
PspEI GGTNACC 1 cut(s) 481
PspFI CCCAGC 1 cut(s) 2476
PspGI CCWGG 5 cut(s) 423, 507, 830, 1608, 1791
PspN4I GGNNCC 7 cut(s) 6, 829, 1564, 1930, 2407, 2408, 2409
PspOMI GGGCCC 1 cut(s) 2406
PspPPI RGGWCCY 1 cut(s) 427
PsrI GAACNNNNNNTAC 2 cut(s) 1677, 1709
PstI CTGCAG 1 cut(s) 1309
PsuI RGATCY 8 cut(s) 4, 32, 251, 371, 724, 853, 1387, 1795
PvuII CAGCTG 2 cut(s) 41, 566
RsaI GTAC 3 cut(s) 21, 60, 1790
RsaNI GTAC 3 cut(s) 20, 59, 1789
RseI CAYNNNNRTG 4 cut(s) 786, 1641, 1752, 1950
SapI GCTCTTC 1 cut(s) 1824
ScaI AGTACT 1 cut(s) 60
SchI GAGTC 4 cut(s) 125, 1144, 2009, 2365
ScrFI CCNGG 8 cut(s) 425, 509, 832, 1062, 1610, 1708, 1709, 1793
SduI GDGCHC 1 cut(s) 2410
SfaNI GCATC 8 cut(s) 346, 424, 529, 1201, 1209, 1504, 2136, 2473
SfcI CTRYAG 3 cut(s) 1305, 1347, 2169
SinI GGWCC 4 cut(s) 427, 828, 1618, 2350
SmaI CCCGGG 1 cut(s) 1709
SmiMI CAYNNNNRTG 4 cut(s) 786, 1641, 1752, 1950
SmlI CTYRAG 3 cut(s) 394, 899, 910
SmoI CTYRAG 3 cut(s) 394, 899, 910
SseBI AGGCCT 1 cut(s) 2322
SsiI CCGC 6 cut(s) 486, 641, 1559, 2097, 2178, 2226
SspMI CTAG 2 cut(s) 1023, 1215
StuI AGGCCT 1 cut(s) 2322
StyD4I CCNGG 8 cut(s) 423, 507, 830, 1060, 1608, 1706, 1707, 1791
StyI CCWWGG 2 cut(s) 195, 750
TaaI ACNGT 5 cut(s) 241, 535, 965, 1071, 2342
TaiI ACGT 2 cut(s) 2014, 2335
TaqI TCGA 7 cut(s) 285, 382, 452, 1822, 2003, 2118, 2579
TatI WGTACW 2 cut(s) 19, 58
TauI GCSGC 2 cut(s) 2099, 2228
TfiI GAWTC 5 cut(s) 578, 1235, 1336, 2000, 2414
TscAI CASTG 8 cut(s) 85, 373, 622, 1636, 1819, 2373, 2424, 2562
TseFI GTSAC 2 cut(s) 481, 2012
Tsp45I GTSAC 2 cut(s) 481, 2012
TspDTI ATGAA 9 cut(s) 179, 212, 675, 706, 1116, 1759, 1866, 2045, 2075
TspGWI ACGGA 1 cut(s) 1235
TspMI CCCGGG 1 cut(s) 1707
TspRI CASTG 8 cut(s) 85, 373, 622, 1636, 1819, 2373, 2424, 2562
Van91I CCANNNNNTGG 1 cut(s) 1264
Vha464I CTTAAG 2 cut(s) 899, 910
VpaK11BI GGWCC 4 cut(s) 427, 828, 1618, 2350
VspI ATTAAT 2 cut(s) 795, 1773
XapI RAATTY 1 cut(s) 1172
XbaI TCTAGA 1 cut(s) 1022
XceI RCATGY 3 cut(s) 1139, 1226, 2125
XcmI CCANNNNNNNNNTGG 1 cut(s) 2468
XmaI CCCGGG 1 cut(s) 1707
XmnI GAANNNNTTC 2 cut(s) 1857, 2244
XspI CTAG 2 cut(s) 1023, 1215
ZrmI AGTACT 1 cut(s) 60
Zsp2I ATGCAT 3 cut(s) 1137, 1224, 1497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.