Rmu_sc0009463.1_g000009
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009463.1
Physical Location & Seq
Reverse (-)
45938 .. 49056
3119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009463.1_g000009.1.cds

Sequence Viewer

Length: 1404 bp
atggaaatgatgaagcgagcaggggagatgtttctagatgctgctgctggagcagtatttggatcgacctgtgactccttcctggaatcgatagagaagtgcggcacgttggatattccggtcctggacagagtcaaatccatggtggagagtttagagctatgcattccaaagatggaagatcatgacatgacctttggagatgaagtaaaagaagagatgaagcgggcaagaaagtttcttgacaagttgtcggaggataatgacttgagctggtccaagacaagtgacaacgaccaacttgttgaattggatgcgtctcttaagagtctggtggggaaactgcgcctgcagttagcaacggaggtcttggctttgggaaagcagaatgctacggttgtgaaggggaccaagagaaaacttgatgaagtggatgagactgttaaagtaggattcttagggtctcagacgagggatgaagtgctcctgaacaagatggtgaaactagaacggaaatttttgggaaaccaagtggatccgctaaatgaaggggcggctctagtagatgcactaggagaacttgatgatgcggctcaagagggaattgcgattcgtatagggtctgtttggtatttgcagcactatctcagagcaagacggtatatcatcagcacatttggattggtagaaaaaaagacggcagaaaataaagcgatggtttatataccggttggcgaagtaagggatttcagaatggcgataaaggacggggtgaatctcctccgcgactgccccgaggtcgctgtgtggaccgatgagctgaagttagaatacaccaacaaatttattgctttgaacaaaacactggaggcactttacaatcgtctagatggaatacgaccacttcaatggaattgtggaacaacgtcggctcaggattctgccatcaagactaccaaggattttatcatccacgtcctcgtcggagtagccaccgactttgttcgccacattcacctcatcgcgtcgaatcatactgctccggcaccgaagcttgatgtcaatttcttccgacatgaagctcgacgtcgccggccggcacgttttactggtacagcgagtcacttgacctcaatacaaagctcgaggaagctcgacaaagagagagagggggatgccggagtcgtgtgcagcgagggagagagacgccggagtcgtctggggagagagaaagtcgccggagttgtctggggagagagagagagacgtcgaagtcgtctaaggagagagaaagagacgccggagtcttctggagcgagggagagagacgccggagtagtctggagcgaggtagagatacgtcggagtcgtctggggagagagagagagagagagagagcttag

Protein Analysis

467

Amino Acids

52.88

Weight (kDa)

8.57

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1212, 1272, 1303
AatII GACGTC 2 cut(s) 1090, 1270
AccB1I GGYRCC 1 cut(s) 1045
AccII CGCG 2 cut(s) 786, 1025
AciI CCGC 6 cut(s) 102, 226, 539, 554, 590, 784
AclWI GGATC 3 cut(s) 70, 530, 543
AcoI YGGCCR 1 cut(s) 1094
AcsI RAATTY 2 cut(s) 515, 842
AcuI CTGAAG 1 cut(s) 842
AcyI GRCGYC 5 cut(s) 1087, 1207, 1267, 1298, 1329
AfaI GTAC 1 cut(s) 1114
AflII CTTAAG 1 cut(s) 323
AgeI ACCGGT 1 cut(s) 727
AgsI TTSAA 3 cut(s) 308, 856, 908
AhdI GACNNNNNGTC 1 cut(s) 250
AjiI CACGTC 1 cut(s) 976
AjnI CCWGG 2 cut(s) 81, 123
AluBI AGCT 8 cut(s) 160, 273, 820, 1054, 1082, 1143, 1153, 1400
AluI AGCT 8 cut(s) 160, 273, 820, 1054, 1082, 1143, 1153, 1400
Alw21I GWGCWC 1 cut(s) 486
Alw26I GTCTC 7 cut(s) 324, 431, 468, 1198, 1258, 1289, 1320
AlwI GGATC 3 cut(s) 70, 530, 543
Ama87I CYCGRG 2 cut(s) 794, 1144
AoxI GGCC 1 cut(s) 1094
ApeKI GCWGC 4 cut(s) 41, 44, 637, 1191
ApoI RAATTY 2 cut(s) 515, 842
ArsI GACNNNNNNTTYG 2 cut(s) 179, 211
AsiGI ACCGGT 1 cut(s) 727
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 4 cut(s) 121, 276, 408, 810
AsuHPI GGTGA 3 cut(s) 511, 784, 1007
AvaI CYCGRG 2 cut(s) 794, 1144
AvaII GGWCC 4 cut(s) 121, 276, 408, 810
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 1 cut(s) 1045
BarI GAAGNNNNNNTAC 2 cut(s) 815, 847
BbsI GAAGAC 1 cut(s) 1299
Bbv12I GWGCWC 1 cut(s) 486
BbvI GCAGC 4 cut(s) 28, 31, 649, 1203
BccI CCATC 5 cut(s) 169, 490, 709, 884, 953
BceAI ACGGC 1 cut(s) 714
BciT130I CCWGG 2 cut(s) 83, 125
BcoDI GTCTC 7 cut(s) 324, 431, 468, 1198, 1258, 1289, 1320
BfaI CTAG 5 cut(s) 35, 506, 560, 572, 887
BfmI CTRYAG 1 cut(s) 350
BfrI CTTAAG 1 cut(s) 323
BisI GCNGC 7 cut(s) 42, 45, 103, 555, 591, 638, 1192
BlsI GCNGC 7 cut(s) 43, 46, 104, 556, 592, 639, 1193
Bme1390I CCNGG 2 cut(s) 83, 125
Bme18I GGWCC 4 cut(s) 121, 276, 408, 810
BmeRI GACNNNNNGTC 1 cut(s) 250
BmeT110I CYCGRG 2 cut(s) 794, 1144
BmgBI CACGTC 1 cut(s) 976
BmgT120I GGNCC 4 cut(s) 121, 276, 408, 810
BmiI GGNNCC 3 cut(s) 409, 537, 1047
BmrFI CCNGG 2 cut(s) 83, 125
BmsI GCATC 5 cut(s) 28, 304, 556, 577, 1165
BpiI GAAGAC 1 cut(s) 1299
BpmI CTGGAG 4 cut(s) 69, 887, 1332, 1363
Bpu10I CCTNAGC 1 cut(s) 933
BpuEI CTTGAG 2 cut(s) 289, 579
Bsa29I ATCGAT 1 cut(s) 89
BsaHI GRCGYC 5 cut(s) 1087, 1207, 1267, 1298, 1329
BsaI GGTCTC 1 cut(s) 468
BsaJI CCNNGG 3 cut(s) 141, 795, 957
BsaWI WCCGGW 2 cut(s) 118, 727
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bse118I RCCGGY 3 cut(s) 727, 1092, 1096
Bse1I ACTGG 2 cut(s) 870, 1114
BseBI CCWGG 2 cut(s) 83, 125
BseCI ATCGAT 1 cut(s) 89
BseDI CCNNGG 3 cut(s) 141, 795, 957
BseGI GGATG 5 cut(s) 319, 439, 481, 969, 1180
BseMII CTCAG 3 cut(s) 479, 661, 947
BseNI ACTGG 2 cut(s) 870, 1114
BseRI GAGGAG 1 cut(s) 770
BseX3I CGGCCG 1 cut(s) 1094
BseXI GCAGC 4 cut(s) 28, 31, 649, 1203
BsgI GTGCAG 1 cut(s) 1210
Bsh1236I CGCG 2 cut(s) 786, 1025
Bsh1285I CGRYCG 1 cut(s) 1097
BshFI GGCC 1 cut(s) 1096
BshNI GGYRCC 1 cut(s) 1045
BshTI ACCGGT 1 cut(s) 727
BshVI ATCGAT 1 cut(s) 89
BsiEI CGRYCG 1 cut(s) 1097
BsiHKAI GWGCWC 1 cut(s) 486
BsiHKCI CYCGRG 2 cut(s) 794, 1144
BslFI GGGAC 1 cut(s) 421
BsmAI GTCTC 7 cut(s) 324, 431, 468, 1198, 1258, 1289, 1320
BsmBI CGTCTC 5 cut(s) 324, 1198, 1258, 1289, 1320
BsmFI GGGAC 1 cut(s) 421
BsmI GAATGC 2 cut(s) 165, 394
BsnI GGCC 1 cut(s) 1096
Bso31I GGTCTC 1 cut(s) 468
BsoBI CYCGRG 2 cut(s) 794, 1144
Bsp1286I GDGCHC 1 cut(s) 486
Bsp143I GATC 3 cut(s) 62, 181, 535
Bsp19I CCATGG 1 cut(s) 141
BspACI CCGC 6 cut(s) 102, 226, 539, 554, 590, 784
BspANI GGCC 1 cut(s) 1096
BspCNI CTCAG 3 cut(s) 478, 660, 946
BspDI ATCGAT 1 cut(s) 89
BspFNI CGCG 2 cut(s) 786, 1025
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 3 cut(s) 409, 537, 1047
BspMAI CTGCAG 1 cut(s) 354
BspPI GGATC 3 cut(s) 70, 530, 543
BspT107I GGYRCC 1 cut(s) 1045
BspTI CTTAAG 1 cut(s) 323
BspTNI GGTCTC 1 cut(s) 468
BsrFI RCCGGY 3 cut(s) 727, 1092, 1096
BsrI ACTGG 2 cut(s) 870, 1114
BssAI RCCGGY 3 cut(s) 727, 1092, 1096
BssECI CCNNGG 3 cut(s) 141, 795, 957
BssMI GATC 3 cut(s) 62, 181, 535
BssNI GRCGYC 5 cut(s) 1087, 1207, 1267, 1298, 1329
BssT1I CCWWGG 2 cut(s) 141, 957
Bst2UI CCWGG 2 cut(s) 83, 125
Bst4CI ACNGT 3 cut(s) 397, 442, 660
Bst6I CTCTTC 1 cut(s) 210
BstACI GRCGYC 5 cut(s) 1087, 1207, 1267, 1298, 1329
BstAFI CTTAAG 1 cut(s) 323
BstC8I GCNNGC 5 cut(s) 18, 228, 350, 1094, 1098
BstDEI CTNAG 6 cut(s) 457, 465, 647, 933, 1280, 1401
BstDSI CCRYGG 1 cut(s) 141
BstF5I GGATG 5 cut(s) 319, 439, 481, 969, 1180
BstFNI CGCG 2 cut(s) 786, 1025
BstHHI GCGC 1 cut(s) 348
BstKTI GATC 3 cut(s) 65, 184, 538
BstMAI GTCTC 7 cut(s) 324, 431, 468, 1198, 1258, 1289, 1320
BstMBI GATC 3 cut(s) 62, 181, 535
BstMCI CGRYCG 1 cut(s) 1097
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstNI CCWGG 2 cut(s) 83, 125
BstSCI CCNGG 2 cut(s) 81, 123
BstSFI CTRYAG 1 cut(s) 350
BstUI CGCG 2 cut(s) 786, 1025
BstV1I GCAGC 4 cut(s) 28, 31, 649, 1203
BstV2I GAAGAC 1 cut(s) 1299
BstX2I RGATCY 1 cut(s) 535
BstXI CCANNNNNNTGG 1 cut(s) 909
BstYI RGATCY 1 cut(s) 535
BstZI CGGCCG 1 cut(s) 1094
Bsu15I ATCGAT 1 cut(s) 89
BsuRI GGCC 1 cut(s) 1096
BsuTUI ATCGAT 1 cut(s) 89
BtgI CCRYGG 1 cut(s) 141
BtgZI GCGATG 2 cut(s) 728, 1006
BtrI CACGTC 1 cut(s) 976
BtsCI GGATG 5 cut(s) 319, 439, 481, 969, 1180
BtsIMutI CAGTG 1 cut(s) 863
Cac8I GCNNGC 5 cut(s) 18, 228, 350, 1094, 1098
CciI TCATGA 1 cut(s) 184
CfoI GCGC 1 cut(s) 348
Cfr10I RCCGGY 3 cut(s) 727, 1092, 1096
Cfr13I GGNCC 4 cut(s) 121, 276, 408, 810
ClaI ATCGAT 1 cut(s) 89
CseI GACGC 5 cut(s) 306, 1014, 1215, 1306, 1337
Csp6I GTAC 1 cut(s) 1113
CspAI ACCGGT 1 cut(s) 727
CspCI CAANNNNNGTGG 2 cut(s) 982, 1017
CviAII CATG 4 cut(s) 142, 185, 190, 1076
CviQI GTAC 1 cut(s) 1113
DdeI CTNAG 6 cut(s) 457, 465, 647, 933, 1280, 1401
DpnI GATC 3 cut(s) 64, 183, 537
DpnII GATC 3 cut(s) 62, 181, 535
DrdI GACNNNNNNGTC 3 cut(s) 1212, 1272, 1303
DriI GACNNNNNGTC 1 cut(s) 250
DseDI GACNNNNNNGTC 3 cut(s) 1212, 1272, 1303
EaeI YGGCCR 1 cut(s) 1094
EagI CGGCCG 1 cut(s) 1094
Eam1104I CTCTTC 1 cut(s) 210
Eam1105I GACNNNNNGTC 1 cut(s) 250
EarI CTCTTC 1 cut(s) 210
EclXI CGGCCG 1 cut(s) 1094
Eco130I CCWWGG 2 cut(s) 141, 957
Eco31I GGTCTC 1 cut(s) 468
Eco47I GGWCC 4 cut(s) 121, 276, 408, 810
Eco52I CGGCCG 1 cut(s) 1094
Eco57I CTGAAG 1 cut(s) 842
Eco88I CYCGRG 2 cut(s) 794, 1144
EcoRII CCWGG 2 cut(s) 81, 123
EcoT14I CCWWGG 2 cut(s) 141, 957
EcoT22I ATGCAT 1 cut(s) 167
ErhI CCWWGG 2 cut(s) 141, 957
Esp3I CGTCTC 5 cut(s) 324, 1198, 1258, 1289, 1320
FaeI CATG 4 cut(s) 145, 188, 193, 1079
FaqI GGGAC 1 cut(s) 421
FatI CATG 4 cut(s) 141, 184, 189, 1075
FauI CCCGC 1 cut(s) 219
Fnu4HI GCNGC 7 cut(s) 42, 45, 103, 555, 591, 638, 1192
FokI GGATG 5 cut(s) 326, 446, 488, 956, 1187
Fsp4HI GCNGC 7 cut(s) 42, 45, 103, 555, 591, 638, 1192
FspBI CTAG 5 cut(s) 35, 506, 560, 572, 887
GlaI GCGC 1 cut(s) 347
GluI GCNGC 7 cut(s) 42, 45, 103, 555, 591, 638, 1192
GsuI CTGGAG 4 cut(s) 69, 887, 1332, 1363
HaeIII GGCC 1 cut(s) 1096
HgaI GACGC 5 cut(s) 306, 1014, 1215, 1306, 1337
HhaI GCGC 1 cut(s) 348
Hin1I GRCGYC 5 cut(s) 1087, 1207, 1267, 1298, 1329
Hin1II CATG 4 cut(s) 145, 188, 193, 1079
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 1052
HphI GGTGA 3 cut(s) 511, 784, 1007
Hpy166II GTNNAC 1 cut(s) 810
Hpy188I TCNGA 7 cut(s) 256, 468, 650, 752, 986, 1073, 1365
Hpy8I GTNNAC 1 cut(s) 810
Hpy99I CGWCG 7 cut(s) 931, 986, 1030, 1089, 1092, 1272, 1365
HpyAV CCTTC 3 cut(s) 88, 397, 542
HpyCH4III ACNGT 3 cut(s) 397, 442, 660
HpyCH4IV ACGT 7 cut(s) 107, 926, 975, 1087, 1102, 1267, 1360
HpyCH4V TGCA 5 cut(s) 165, 352, 569, 637, 1191
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
HpyF3I CTNAG 6 cut(s) 457, 465, 647, 933, 1280, 1401
HpySE526I ACGT 7 cut(s) 107, 926, 975, 1087, 1102, 1267, 1360
Hsp92I GRCGYC 5 cut(s) 1087, 1207, 1267, 1298, 1329
Hsp92II CATG 4 cut(s) 145, 188, 193, 1079
HspAI GCGC 1 cut(s) 346
KroI GCCGGC 2 cut(s) 1092, 1096
KroNI GCCGGC 2 cut(s) 1094, 1098
Kzo9I GATC 3 cut(s) 62, 181, 535
LmnI GCTCC 5 cut(s) 50, 489, 1045, 1313, 1344
Lsp1109I GCAGC 4 cut(s) 28, 31, 649, 1203
LweI GCATC 5 cut(s) 28, 304, 556, 577, 1165
MaeI CTAG 5 cut(s) 35, 506, 560, 572, 887
MaeII ACGT 7 cut(s) 107, 926, 975, 1087, 1102, 1267, 1360
MaeIII GTNAC 3 cut(s) 71, 287, 1121
MalI GATC 3 cut(s) 64, 183, 537
MboI GATC 3 cut(s) 62, 181, 535
MboII GAAGA 4 cut(s) 191, 227, 1060, 1299
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 1 cut(s) 486
MluCI AATT 6 cut(s) 308, 515, 603, 842, 913, 1063
MlyI GAGTC 8 cut(s) 68, 141, 337, 1129, 1191, 1222, 1313, 1375
MmeI TCCRAC 5 cut(s) 90, 234, 964, 1096, 1343
Mph1103I ATGCAT 1 cut(s) 167
MroNI GCCGGC 2 cut(s) 1092, 1096
MseI TTAA 2 cut(s) 324, 444
MslI CAYNNNNRTG 1 cut(s) 907
MspCI CTTAAG 1 cut(s) 323
MspR9I CCNGG 2 cut(s) 83, 125
Mva1269I GAATGC 2 cut(s) 165, 394
MvaI CCWGG 2 cut(s) 83, 125
MvnI CGCG 2 cut(s) 786, 1025
MwoI GCNNNNNNNGC 1 cut(s) 50
NaeI GCCGGC 2 cut(s) 1094, 1098
NcoI CCATGG 1 cut(s) 141
NdeII GATC 3 cut(s) 62, 181, 535
NgoMIV GCCGGC 2 cut(s) 1092, 1096
NlaIII CATG 4 cut(s) 145, 188, 193, 1079
NlaIV GGNNCC 3 cut(s) 409, 537, 1047
NmuCI GTSAC 3 cut(s) 71, 287, 1121
NsiI ATGCAT 1 cut(s) 167
PaeR7I CTCGAG 1 cut(s) 1144
PagI TCATGA 1 cut(s) 184
PcsI WCGNNNNNNNCGW 4 cut(s) 1191, 1213, 1273, 1366
PctI GAATGC 2 cut(s) 165, 394
PdiI GCCGGC 2 cut(s) 1094, 1098
PfeI GAWTC 6 cut(s) 86, 453, 610, 775, 938, 1030
PflFI GACNNNGTC 1 cut(s) 131
PfoI TCCNGGA 2 cut(s) 81, 123
PinAI ACCGGT 1 cut(s) 727
PkrI GCNGC 7 cut(s) 43, 46, 104, 556, 592, 639, 1193
PleI GAGTC 8 cut(s) 68, 140, 336, 1128, 1190, 1221, 1312, 1374
PpsI GAGTC 8 cut(s) 68, 140, 336, 1128, 1190, 1221, 1312, 1374
Psp6I CCWGG 2 cut(s) 81, 123
PspGI CCWGG 2 cut(s) 81, 123
PspN4I GGNNCC 3 cut(s) 409, 537, 1047
PspPI GGNCC 4 cut(s) 121, 276, 408, 810
PspXI VCTCGAGB 1 cut(s) 1144
PstI CTGCAG 1 cut(s) 354
PsuI RGATCY 1 cut(s) 535
PsyI GACNNNGTC 1 cut(s) 131
RsaI GTAC 1 cut(s) 1114
RsaNI GTAC 1 cut(s) 1113
RseI CAYNNNNRTG 1 cut(s) 907
SaqAI TTAA 2 cut(s) 324, 444
SatI GCNGC 7 cut(s) 42, 45, 103, 555, 591, 638, 1192
Sau3AI GATC 3 cut(s) 62, 181, 535
Sau96I GGNCC 4 cut(s) 121, 276, 408, 810
SchI GAGTC 8 cut(s) 68, 141, 337, 1129, 1191, 1222, 1313, 1375
ScrFI CCNGG 2 cut(s) 83, 125
SduI GDGCHC 1 cut(s) 486
SfaNI GCATC 5 cut(s) 28, 304, 556, 577, 1165
SfcI CTRYAG 1 cut(s) 350
Sfr274I CTCGAG 1 cut(s) 1144
SinI GGWCC 4 cut(s) 121, 276, 408, 810
SlaI CTCGAG 1 cut(s) 1144
SmiMI CAYNNNNRTG 1 cut(s) 907
SmlI CTYRAG 4 cut(s) 268, 323, 594, 1144
SmoI CTYRAG 4 cut(s) 268, 323, 594, 1144
Sse9I AATT 6 cut(s) 308, 515, 603, 842, 913, 1063
SsiI CCGC 6 cut(s) 102, 226, 539, 554, 590, 784
SspMI CTAG 5 cut(s) 35, 506, 560, 572, 887
StyD4I CCNGG 2 cut(s) 81, 123
StyI CCWWGG 2 cut(s) 141, 957
TaaI ACNGT 3 cut(s) 397, 442, 660
TaiI ACGT 7 cut(s) 110, 929, 978, 1090, 1105, 1270, 1363
TaqI TCGA 7 cut(s) 65, 89, 1028, 1084, 1145, 1155, 1270
TaqII GACCGA 1 cut(s) 827
TasI AATT 6 cut(s) 308, 515, 603, 842, 913, 1063
TauI GCSGC 3 cut(s) 105, 557, 593
TfiI GAWTC 6 cut(s) 86, 453, 610, 775, 938, 1030
Tru1I TTAA 2 cut(s) 324, 444
Tru9I TTAA 2 cut(s) 324, 444
TscAI CASTG 1 cut(s) 870
TseFI GTSAC 3 cut(s) 71, 287, 1121
TseI GCWGC 4 cut(s) 41, 44, 637, 1191
Tsp45I GTSAC 3 cut(s) 71, 287, 1121
TspDTI ATGAA 7 cut(s) 26, 219, 236, 441, 492, 561, 1092
TspGWI ACGGA 2 cut(s) 377, 526
TspRI CASTG 1 cut(s) 870
Tth111I GACNNNGTC 1 cut(s) 131
Vha464I CTTAAG 1 cut(s) 323
VpaK11BI GGWCC 4 cut(s) 121, 276, 408, 810
XapI RAATTY 2 cut(s) 515, 842
XbaI TCTAGA 2 cut(s) 34, 886
XhoI CTCGAG 1 cut(s) 1144
XspI CTAG 5 cut(s) 35, 506, 560, 572, 887
ZraI GACGTC 2 cut(s) 1088, 1268
Zsp2I ATGCAT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.