Rmu_sc0010716.1_g000005

LRR receptor-like serine threonine-protein kinase At2g28960

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010716.1
Physical Location & Seq
Forward (+)
15519 .. 17981
2463 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010716.1_g000005.1.cds

Sequence Viewer

Length: 1839 bp
atgactgagcttctaaagcaatctagtattgtcctcatcttcatactggtcaccaccatcagctttgcagtcgctcagcctcctccgtcgaactgtagccttcattttgatgatgttccatccaattcaagttgtggaaatggagactggggagggtttctgcacaatagctgctgtgcaacaatatttgacgagtacctctacgcattggggcagcgagcaaaccaaacaggaaacatatttctggactctacccagcagcggaattgccttgatgtcatgcaaaaatttcagaagaatgtgtttggctgtgggtttgagcagctgactagtggtgcaggtggctgctctgacttctctattggtgatgttactagtaagttcggagacaagttgagaagtttagatgagaaatgtaacattcagagttctgatggatgtagttcctgtgctaagagttggggaaatataagagcagtgccctcatggtcctccgatccacagtctattaaggctgaaacacaagtttgcaggtttgcagttctggtgacatactcaaggactaaaatccaagataaagaccatctccttacagtttataagtgccttgaggcccaaaagtatgatgatcaagccgggaagggtagaaaaataagcacacgtaaggcttcttccatcaacactgaaagtatcattggtttcttatccctaacacattacacttttaacatgaaagcaggtttattgatcctcatcggaggagcaataggtattatcatttcagtagtaacagctgcatacattttttccaagaaacgtaccaaaacaactcaaccaccagttgtcgccaaaaagacaactccatcgcccaaaaaagaagcagcattcaaggatgtaatttttaaggagtccggctgtccaaaaattccgatcaaggaagtgttatatgctacagacaatctaagcccagtacatttccttggtgaaggaactgctggaaaggtttatagaggtatactgtcgaataatcagccagtagcaattaagcacattatcgatgatgaaaatgtggagtcttttgccagagaatttacaagcttatcacacatcagacaccccaaccttgttactttgcttggttactgtctacaggaagatgagtgtttcattgtgtatgagctttgtccaaatgggaacctctcagaatggcttttcggtaaagataagtgcctgtcctggatccagaggcttgagattgcaattgatagcgctcaaggtctattgtttctccacacgtatccagaaggctgcattgttcatcgtgacatcaagccaacaaacattctccttggggacaattttgaagccaagctatcggactttggactatctaagatcattgaactgggtgaaacctatgtgagttcagaagtgagaggaacttttggttatgttgatcctgactaccagagaaaccaccatgtaaattcttctggagatgtctacagctttggaattgtacttctacaaatcctatcaggaaagagggttatcaatatgaatctgaacacaccactgccattaaataaaatggcaaaaggccttaacagaactggcagcatcaatgaatttgccgatcctaaactcgatggggaatactcagcagaagctttcaatctcacacttcagctggctctgtcatgcacagaacttagacaacaaagaccatccatggagcaaattgttgtcagattaggacaggcacatgacatatcaacacaggcaaaggcctctactcctgaagtttcaatagacagctaccaaagttcaaatccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

612

Amino Acids

67.41

Weight (kDa)

6.51

Isoelectric Point (pI)

39.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AarI CACCTGC 1 cut(s) 329
Acc36I ACCTGC 3 cut(s) 329, 522, 728
AccI GTMKAC 3 cut(s) 1015, 1147, 1503
AciI CCGC 1 cut(s) 262
AclWI GGATC 6 cut(s) 491, 742, 1234, 1247, 1451, 1631
AcsI RAATTY 5 cut(s) 287, 924, 1088, 1486, 1628
AcuI CTGAAG 2 cut(s) 1670, 1821
AfaI GTAC 4 cut(s) 197, 820, 972, 1521
AfeI AGCGCT 1 cut(s) 1270
AfiI CCNNNNNNNGG 1 cut(s) 261
AflIII ACRYGT 2 cut(s) 659, 1293
AgsI TTSAA 7 cut(s) 129, 889, 1364, 1403, 1675, 1809, 1830
AhlI ACTAGT 2 cut(s) 329, 374
AjnI CCWGG 1 cut(s) 1235
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
Alw26I GTCTC 2 cut(s) 138, 381
AlwI GGATC 6 cut(s) 491, 742, 1234, 1247, 1451, 1631
Aor51HI AGCGCT 1 cut(s) 1270
AoxI GGCC 3 cut(s) 612, 1600, 1788
ApeKI GCWGC 9 cut(s) 171, 214, 259, 322, 345, 794, 881, 1308, 1617
ApoI RAATTY 5 cut(s) 287, 924, 1088, 1486, 1628
AspLEI GCGC 1 cut(s) 1271
AspS9I GGNCC 2 cut(s) 489, 613
AsuC2I CCSGG 1 cut(s) 637
AsuHPI GGTGA 5 cut(s) 43, 377, 559, 995, 1421
AvaII GGWCC 1 cut(s) 489
BaeGI GKGCMC 1 cut(s) 483
BamHI GGATCC 1 cut(s) 1239
BarI GAAGNNNNNNTAC 2 cut(s) 655, 687
BbvI GCAGC 9 cut(s) 158, 226, 271, 332, 334, 781, 893, 1295, 1629
BccI CCATC 8 cut(s) 65, 127, 428, 591, 683, 871, 1643, 1735
BciT130I CCWGG 1 cut(s) 1237
BciVI GTATCC 1 cut(s) 1308
BclI TGATCA 1 cut(s) 628
BcnI CCSGG 1 cut(s) 637
BcoDI GTCTC 2 cut(s) 138, 381
BcuI ACTAGT 2 cut(s) 329, 374
BfaI CTAG 3 cut(s) 24, 330, 375
BfmI CTRYAG 4 cut(s) 94, 951, 1148, 1504
BfoI RGCGCY 1 cut(s) 1272
BfuAI ACCTGC 3 cut(s) 329, 522, 728
BfuI GTATCC 1 cut(s) 1308
BisI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 795, 882, 1309, 1618
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 9 cut(s) 173, 216, 261, 324, 347, 796, 883, 1310, 1619
Bme1390I CCNGG 2 cut(s) 637, 1237
Bme18I GGWCC 1 cut(s) 489
BmgT120I GGNCC 2 cut(s) 489, 613
BmiI GGNNCC 2 cut(s) 1196, 1241
BmrFI CCNGG 2 cut(s) 637, 1237
BmrI ACTGGG 3 cut(s) 157, 962, 1415
BmsI GCATC 1 cut(s) 1629
BmuI ACTGGG 3 cut(s) 157, 962, 1415
BpmI CTGGAG 1 cut(s) 1515
Bpu1102I GCTNAGC 1 cut(s) 75
BpuEI CTTGAG 4 cut(s) 541, 629, 1257, 1271
BpuMI CCSGG 1 cut(s) 637
Bsa29I ATCGAT 1 cut(s) 1056
BsaAI YACGTR 2 cut(s) 662, 1296
BsaBI GATNNNNATC 1 cut(s) 752
BsaJI CCNNGG 3 cut(s) 979, 1348, 1731
Bsc4I CCNNNNNNNGG 1 cut(s) 261
Bse1I ACTGG 7 cut(s) 51, 152, 839, 968, 1034, 1410, 1618
Bse8I GATNNNNATC 1 cut(s) 752
BseBI CCWGG 1 cut(s) 1237
BseCI ATCGAT 1 cut(s) 1056
BseDI CCNNGG 3 cut(s) 979, 1348, 1731
BseGI GGATG 4 cut(s) 119, 443, 898, 1727
BseJI GATNNNNATC 1 cut(s) 752
BseLI CCNNNNNNNGG 1 cut(s) 261
BseMII CTCAG 3 cut(s) 89, 1215, 1674
BseNI ACTGG 7 cut(s) 51, 152, 839, 968, 1034, 1410, 1618
BseRI GAGGAG 2 cut(s) 72, 774
BseSI GKGCMC 1 cut(s) 483
BseXI GCAGC 9 cut(s) 158, 226, 271, 332, 334, 781, 893, 1295, 1629
BseYI CCCAGC 1 cut(s) 255
BsgI GTGCAG 2 cut(s) 146, 357
BshFI GGCC 3 cut(s) 614, 1602, 1790
BshVI ATCGAT 1 cut(s) 1056
BsiSI CCGG 2 cut(s) 636, 912
BslFI GGGAC 1 cut(s) 1367
BslI CCNNNNNNNGG 1 cut(s) 261
BsmAI GTCTC 2 cut(s) 138, 381
BsmFI GGGAC 1 cut(s) 1367
BsmI GAATGC 1 cut(s) 884
BsnI GGCC 3 cut(s) 614, 1602, 1790
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
Bsp1720I GCTNAGC 1 cut(s) 75
Bsp19I CCATGG 1 cut(s) 1731
BspACI CCGC 1 cut(s) 262
BspANI GGCC 3 cut(s) 614, 1602, 1790
BspCNI CTCAG 3 cut(s) 88, 1214, 1673
BspDI ATCGAT 1 cut(s) 1056
BspLI GGNNCC 2 cut(s) 1196, 1241
BspMI ACCTGC 3 cut(s) 329, 522, 728
BspPI GGATC 6 cut(s) 491, 742, 1234, 1247, 1451, 1631
BsrI ACTGG 7 cut(s) 51, 152, 839, 968, 1034, 1410, 1618
BssECI CCNNGG 3 cut(s) 979, 1348, 1731
BssMI GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
BssNAI GTATAC 1 cut(s) 1016
BssT1I CCWWGG 3 cut(s) 979, 1348, 1731
Bst1107I GTATAC 1 cut(s) 1016
Bst2UI CCWGG 1 cut(s) 1237
Bst4CI ACNGT 5 cut(s) 95, 504, 595, 1020, 1145
BstBAI YACGTR 2 cut(s) 662, 1296
BstC8I GCNNGC 2 cut(s) 219, 1692
BstDEI CTNAG 8 cut(s) 6, 75, 453, 962, 1201, 1392, 1660, 1712
BstDSI CCRYGG 1 cut(s) 1731
BstEII GGTNACC 1 cut(s) 49
BstF5I GGATG 4 cut(s) 119, 443, 898, 1727
BstH2I RGCGCY 1 cut(s) 1272
BstHHI GCGC 1 cut(s) 1271
BstKTI GATC 8 cut(s) 499, 631, 750, 933, 1242, 1398, 1459, 1639
BstMAI GTCTC 2 cut(s) 138, 381
BstMBI GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstNI CCWGG 1 cut(s) 1237
BstPI GGTNACC 1 cut(s) 49
BstSCI CCNGG 2 cut(s) 635, 1235
BstSFI CTRYAG 4 cut(s) 94, 951, 1148, 1504
BstSLI GKGCMC 1 cut(s) 483
BstV1I GCAGC 9 cut(s) 158, 226, 271, 332, 334, 781, 893, 1295, 1629
BstX2I RGATCY 1 cut(s) 1239
BstYI RGATCY 1 cut(s) 1239
BstZ17I GTATAC 1 cut(s) 1016
Bsu15I ATCGAT 1 cut(s) 1056
BsuI GTATCC 1 cut(s) 1308
BsuRI GGCC 3 cut(s) 614, 1602, 1790
BsuTUI ATCGAT 1 cut(s) 1056
BtgI CCRYGG 1 cut(s) 1731
BtgZI GCGATG 1 cut(s) 849
BtsCI GGATG 4 cut(s) 119, 443, 898, 1727
BtsI GCAGTG 2 cut(s) 483, 1574
BtsIMutI CAGTG 3 cut(s) 483, 681, 1574
BveI ACCTGC 3 cut(s) 329, 522, 728
Cac8I GCNNGC 2 cut(s) 219, 1692
CfoI GCGC 1 cut(s) 1271
Cfr13I GGNCC 2 cut(s) 489, 613
ClaI ATCGAT 1 cut(s) 1056
Csp6I GTAC 4 cut(s) 196, 819, 971, 1520
CviAII CATG 8 cut(s) 280, 486, 730, 1481, 1701, 1732, 1766, 1836
CviQI GTAC 4 cut(s) 196, 819, 971, 1520
DdeI CTNAG 8 cut(s) 6, 75, 453, 962, 1201, 1392, 1660, 1712
DpnI GATC 8 cut(s) 498, 630, 749, 932, 1241, 1397, 1458, 1638
DpnII GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
Eco130I CCWWGG 3 cut(s) 979, 1348, 1731
Eco147I AGGCCT 2 cut(s) 1602, 1790
Eco47I GGWCC 1 cut(s) 489
Eco47III AGCGCT 1 cut(s) 1270
Eco57I CTGAAG 2 cut(s) 1670, 1821
Eco91I GGTNACC 1 cut(s) 49
EcoO65I GGTNACC 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 1235
EcoT14I CCWWGG 3 cut(s) 979, 1348, 1731
ErhI CCWWGG 3 cut(s) 979, 1348, 1731
FaeI CATG 8 cut(s) 283, 489, 733, 1484, 1704, 1735, 1769, 1839
FaqI GGGAC 1 cut(s) 1367
FatI CATG 8 cut(s) 279, 485, 729, 1480, 1700, 1731, 1765, 1835
FbaI TGATCA 1 cut(s) 628
FblI GTMKAC 3 cut(s) 1015, 1147, 1503
Fnu4HI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 795, 882, 1309, 1618
FokI GGATG 4 cut(s) 106, 450, 905, 1714
Fsp4HI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 795, 882, 1309, 1618
FspBI CTAG 3 cut(s) 24, 330, 375
GlaI GCGC 1 cut(s) 1270
GluI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 795, 882, 1309, 1618
GsaI CCCAGC 1 cut(s) 259
GsuI CTGGAG 1 cut(s) 1515
HaeII RGCGCY 1 cut(s) 1272
HaeIII GGCC 3 cut(s) 614, 1602, 1790
HapII CCGG 2 cut(s) 636, 912
HhaI GCGC 1 cut(s) 1271
Hin1II CATG 8 cut(s) 283, 489, 733, 1484, 1704, 1735, 1769, 1839
Hin6I GCGC 1 cut(s) 1269
HinP1I GCGC 1 cut(s) 1269
HindIII AAGCTT 2 cut(s) 1096, 1668
HinfI GANTC 4 cut(s) 248, 908, 1073, 1561
HpaII CCGG 2 cut(s) 636, 912
HphI GGTGA 5 cut(s) 43, 377, 559, 995, 1421
Hpy166II GTNNAC 3 cut(s) 1016, 1148, 1504
Hpy188III TCNNGA 8 cut(s) 245, 1243, 1301, 1322, 1460, 1494, 1539, 1799
Hpy8I GTNNAC 3 cut(s) 1016, 1148, 1504
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 4 cut(s) 110, 634, 980, 1298
HpyCH4III ACNGT 5 cut(s) 95, 504, 595, 1020, 1145
HpyCH4IV ACGT 3 cut(s) 661, 817, 1295
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 8 cut(s) 6, 75, 453, 962, 1201, 1392, 1660, 1712
HpySE526I ACGT 3 cut(s) 661, 817, 1295
Hsp92II CATG 8 cut(s) 283, 489, 733, 1484, 1704, 1735, 1769, 1839
HspAI GCGC 1 cut(s) 1269
Ksp22I TGATCA 1 cut(s) 628
Kzo9I GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
LmnI GCTCC 2 cut(s) 761, 1735
Lsp1109I GCAGC 9 cut(s) 158, 226, 271, 332, 334, 781, 893, 1295, 1629
LweI GCATC 1 cut(s) 1629
MaeI CTAG 3 cut(s) 24, 330, 375
MaeII ACGT 3 cut(s) 661, 817, 1295
MaeIII GTNAC 8 cut(s) 49, 370, 416, 547, 787, 1126, 1139, 1322
MalI GATC 8 cut(s) 498, 630, 749, 932, 1241, 1397, 1458, 1638
MboI GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
MboII GAAGA 5 cut(s) 31, 307, 663, 1166, 1482
MfeI CAATTG 1 cut(s) 1260
MflI RGATCY 1 cut(s) 1239
MhlI GDGCHC 1 cut(s) 483
MlyI GAGTC 3 cut(s) 242, 917, 1082
MseI TTAA 6 cut(s) 510, 726, 903, 1044, 1583, 1605
MslI CAYNNNNRTG 1 cut(s) 108
MspA1I CMGCKG 4 cut(s) 262, 325, 794, 1690
MspI CCGG 2 cut(s) 636, 912
MspR9I CCNGG 2 cut(s) 637, 1237
MunI CAATTG 1 cut(s) 1260
Mva1269I GAATGC 1 cut(s) 884
MvaI CCWGG 1 cut(s) 1237
MwoI GCNNNNNNNGC 1 cut(s) 16
NciI CCSGG 1 cut(s) 637
NcoI CCATGG 1 cut(s) 1731
NdeII GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
NlaIII CATG 8 cut(s) 283, 489, 733, 1484, 1704, 1735, 1769, 1839
NlaIV GGNNCC 2 cut(s) 1196, 1241
NmuCI GTSAC 3 cut(s) 49, 547, 1322
PaqCI CACCTGC 1 cut(s) 329
PceI AGGCCT 2 cut(s) 1602, 1790
PctI GAATGC 1 cut(s) 884
PfeI GAWTC 1 cut(s) 1561
PfoI TCCNGGA 1 cut(s) 1235
PkrI GCNGC 9 cut(s) 173, 216, 261, 324, 347, 796, 883, 1310, 1619
PleI GAGTC 3 cut(s) 242, 916, 1081
PpsI GAGTC 3 cut(s) 242, 916, 1081
Ppu21I YACGTR 2 cut(s) 662, 1296
PsiI TTATAA 1 cut(s) 600
Psp6I CCWGG 1 cut(s) 1235
PspEI GGTNACC 1 cut(s) 49
PspFI CCCAGC 1 cut(s) 255
PspGI CCWGG 1 cut(s) 1235
PspN4I GGNNCC 2 cut(s) 1196, 1241
PspPI GGNCC 2 cut(s) 489, 613
PsuI RGATCY 1 cut(s) 1239
PvuII CAGCTG 3 cut(s) 325, 794, 1690
RsaI GTAC 4 cut(s) 197, 820, 972, 1521
RsaNI GTAC 4 cut(s) 196, 819, 971, 1520
RseI CAYNNNNRTG 1 cut(s) 108
SaqAI TTAA 6 cut(s) 510, 726, 903, 1044, 1583, 1605
SatI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 795, 882, 1309, 1618
Sau3AI GATC 8 cut(s) 496, 628, 747, 930, 1239, 1395, 1456, 1636
Sau96I GGNCC 2 cut(s) 489, 613
SchI GAGTC 3 cut(s) 242, 917, 1082
ScrFI CCNGG 2 cut(s) 637, 1237
SduI GDGCHC 1 cut(s) 483
SfaNI GCATC 1 cut(s) 1629
SfcI CTRYAG 4 cut(s) 94, 951, 1148, 1504
SinI GGWCC 1 cut(s) 489
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 4 cut(s) 556, 608, 1250, 1272
SmoI CTYRAG 4 cut(s) 556, 608, 1250, 1272
SpeI ACTAGT 2 cut(s) 329, 374
SseBI AGGCCT 2 cut(s) 1602, 1790
SsiI CCGC 1 cut(s) 262
SspI AATATT 1 cut(s) 186
SspMI CTAG 3 cut(s) 24, 330, 375
StuI AGGCCT 2 cut(s) 1602, 1790
StyD4I CCNGG 2 cut(s) 635, 1235
StyI CCWWGG 3 cut(s) 979, 1348, 1731
TaaI ACNGT 5 cut(s) 95, 504, 595, 1020, 1145
TaiI ACGT 3 cut(s) 664, 820, 1298
TaqI TCGA 4 cut(s) 89, 1022, 1056, 1647
TatI WGTACW 2 cut(s) 970, 1519
TfiI GAWTC 1 cut(s) 1561
Tru1I TTAA 6 cut(s) 510, 726, 903, 1044, 1583, 1605
Tru9I TTAA 6 cut(s) 510, 726, 903, 1044, 1583, 1605
TscAI CASTG 3 cut(s) 483, 688, 1581
TseFI GTSAC 3 cut(s) 49, 547, 1322
TseI GCWGC 9 cut(s) 171, 214, 259, 322, 345, 794, 881, 1308, 1617
Tsp45I GTSAC 3 cut(s) 49, 547, 1322
TspDTI ATGAA 8 cut(s) 31, 92, 746, 1077, 1156, 1307, 1574, 1641
TspGWI ACGGA 1 cut(s) 75
TspRI CASTG 3 cut(s) 483, 688, 1581
VpaK11BI GGWCC 1 cut(s) 489
XapI RAATTY 5 cut(s) 287, 924, 1088, 1486, 1628
XmiI GTMKAC 3 cut(s) 1015, 1147, 1503
XspI CTAG 3 cut(s) 24, 330, 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.