Rh2BG636100

LRR receptor-like serine threonine-protein kinase At2g28960

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
85682010 .. 85684560
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG636100.1

Sequence Viewer

Length: 1761 bp
ATGACTGAGCTTCTAAAGCAATCTAGTATTGTCCTCATCTTCATACTGGTCACCACCATCAGCTTTGCAGTCCCTCAGCCTCCTCCGTCGAACTGTAGCCTTCATTTTGATGATGTTCCATCCAATTCAAGTTGTGGAAATGGAGACTGGGGAGGGTTTCTGCACAATAGCTGCTGTGCAACAATATTTGACGAGTACCTCTACGCATTGGGGCAGCGAGCAAACCAAACAGGAAACATATTTCTGGACTCTACCGAGCAGCGGAATTGCCTTGATGTCATGCAAAAATTTCAGAAGAATGTGTTTGGCTGTGGGTTTGAGCAGCTGACTAGTGGTGCAGGTGGCTGCTCTGACTTCTCTATTGGTGATGTTACTAGTAAGTTCGGAGACAAGTTGAGAAGTTTAGATGAGAAATGTAACATTCAGAGTTCTGATGGATGTAGTTCCTGTGCTAAGAGTTGGGGAAATATAAGAGCATTGCCCTCATGGTCCTCCGATCCACAGTCTATTAAGGCTGAAACACAAGTTTGCAGGTTTGCAGTTCTGGTGACATACTCAAGGACTAAAATCCAAGATAAAGACCATCTCCTTACAGTTTATAAGTGCCTTGAGGCACAAAAGTATGATGATCAAGCCGGGAAGGGTAGAAAAATAAGCACACGTTTATTGATCCTCATCGGAGGAGCAATAGGTATTATCATTTCAGTAGTAACAGCTGCATACATTTTTTCCAAGAAACGTACCAAAACAACTCAACCACCAGTTGTCGCCAAAAAGACAACTCCATCGCCCAAAAAAGAAGCAGCATTCAAGGATGTAATTTTTAAGGAGTCCGGCTGTCCAAAAATTCCGATCAAGGAAGTGTTATATGCTACAGACAATCTAAGCCCAGTACATTTCCTTGGTGAAGGAACTGCTGGAAAGGTTTATAGAGGCATACTGTCGAATAATCAGCCAGTAGCAATTAAGCACATTATCGATGATGAAAATGTGGAGTCTTTTGCCAGAGAATTTACAAGCTTATCACACATCAGACACCCCAACCTTGTTACTTTGCTTGGTTACTGTCTACAGGAAGATGAGTGTTTCCTTGTGTATGAGCTTTGTCCAAATGGGAACCTCTCAGAATGGCTTTTCGGTAAAGATAAGTGCCTGTCCTGGATCCAGAGGCTTGAGATTGCAATTGATAGCGCTCAAGGTCTATTGTTTCTCCACACGTATCCAGAAGGCTGCATTGTTCATCGTGACATCAAGCCAACAAACATTCTCCTTGGGGACAATTTTGAAGCCAAGCTATCGGACTTTGGACTATCTAAGATCATTGAACTTGGTGAAACCTATGTGAGTTCAGAAGTGAGAGGAACTTTTGGTTATGTTGATCCTGACTACCAGAGAAACCACCATGTAAATTCTTCTGGAGATGTCTACAGCTTTGGAATTGTACTTCTACAAATCCTATCAGGAAAGAGGGTTATCAATATGAATCTGAACACACCACTGCCATTAAATAAAATGGCAAAAGGCCTTAACAGAGCTGGCAGCATCAATGAATTTGCCGATCCTAAACTCGATGGGGAATACTCAGCAGAAGCTTTCAATCTCACACTTCAGCTGGCTCTGTCATGCACAGAACTTAGACAACAAAGACCATCCATGGAGCAAATTGTTGTCAGATTAGAACAGGCACATGACATATCAACACAGGCAAAGGCCTCTACTCCTGAAGTTTCAATAGACAGCTACCAAAGTTCAAATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

64.68

Weight (kDa)

6.1

Isoelectric Point (pI)

40.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 30 - 158 8.3e-13 SPARK
Pkinase PF00069 299 - 556 2.1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 300 - 491 4.3e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AarI CACCTGC 1 cut(s) 329
Acc36I ACCTGC 2 cut(s) 329, 522
AccI GTMKAC 2 cut(s) 1069, 1425
AciI CCGC 1 cut(s) 262
AclWI GGATC 6 cut(s) 491, 664, 1156, 1169, 1373, 1553
AcsI RAATTY 5 cut(s) 287, 846, 1010, 1408, 1550
AcuI CTGAAG 2 cut(s) 1592, 1743
AfaI GTAC 4 cut(s) 197, 742, 894, 1443
AfeI AGCGCT 1 cut(s) 1192
AfiI CCNNNNNNNGG 1 cut(s) 261
AflIII ACRYGT 2 cut(s) 659, 1215
AgsI TTSAA 7 cut(s) 129, 811, 1286, 1325, 1597, 1731, 1752
AhlI ACTAGT 2 cut(s) 329, 374
AjnI CCWGG 1 cut(s) 1157
Alw26I GTCTC 2 cut(s) 138, 381
AlwI GGATC 6 cut(s) 491, 664, 1156, 1169, 1373, 1553
Aor51HI AGCGCT 1 cut(s) 1192
AoxI GGCC 2 cut(s) 1522, 1710
ApeKI GCWGC 9 cut(s) 171, 214, 259, 322, 345, 716, 803, 1230, 1539
ApoI RAATTY 5 cut(s) 287, 846, 1010, 1408, 1550
AspLEI GCGC 1 cut(s) 1193
AspS9I GGNCC 1 cut(s) 489
AsuC2I CCSGG 1 cut(s) 637
AsuHPI GGTGA 5 cut(s) 43, 377, 559, 917, 1343
AvaII GGWCC 1 cut(s) 489
BamHI GGATCC 1 cut(s) 1161
BbvCI CCTCAGC 1 cut(s) 75
BbvI GCAGC 9 cut(s) 158, 226, 271, 332, 334, 703, 815, 1217, 1551
BccI CCATC 7 cut(s) 65, 127, 428, 591, 793, 1565, 1657
BciT130I CCWGG 1 cut(s) 1159
BciVI GTATCC 1 cut(s) 1230
BclI TGATCA 1 cut(s) 628
BcnI CCSGG 1 cut(s) 637
BcoDI GTCTC 2 cut(s) 138, 381
BcuI ACTAGT 2 cut(s) 329, 374
BfaI CTAG 3 cut(s) 24, 330, 375
BfmI CTRYAG 4 cut(s) 94, 873, 1070, 1426
BfoI RGCGCY 1 cut(s) 1194
BfuAI ACCTGC 2 cut(s) 329, 522
BfuI GTATCC 1 cut(s) 1230
BisI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 717, 804, 1231, 1540
BlsI GCNGC 9 cut(s) 173, 216, 261, 324, 347, 718, 805, 1232, 1541
Bme1390I CCNGG 2 cut(s) 637, 1159
Bme18I GGWCC 1 cut(s) 489
BmgT120I GGNCC 1 cut(s) 489
BmiI GGNNCC 2 cut(s) 1118, 1163
BmrFI CCNGG 2 cut(s) 637, 1159
BmrI ACTGGG 2 cut(s) 157, 884
BmsI GCATC 1 cut(s) 1551
BmuI ACTGGG 2 cut(s) 157, 884
BpmI CTGGAG 1 cut(s) 1437
Bpu10I CCTNAGC 1 cut(s) 75
BpuEI CTTGAG 4 cut(s) 541, 629, 1179, 1193
BpuMI CCSGG 1 cut(s) 637
Bsa29I ATCGAT 1 cut(s) 978
BsaAI YACGTR 1 cut(s) 1218
BsaBI GATNNNNATC 1 cut(s) 674
BsaJI CCNNGG 3 cut(s) 901, 1270, 1653
Bsc4I CCNNNNNNNGG 1 cut(s) 261
Bse1I ACTGG 5 cut(s) 51, 152, 761, 890, 956
Bse3DI GCAATG 1 cut(s) 476
Bse8I GATNNNNATC 1 cut(s) 674
BseBI CCWGG 1 cut(s) 1159
BseCI ATCGAT 1 cut(s) 978
BseDI CCNNGG 3 cut(s) 901, 1270, 1653
BseGI GGATG 4 cut(s) 119, 443, 820, 1649
BseJI GATNNNNATC 1 cut(s) 674
BseLI CCNNNNNNNGG 1 cut(s) 261
BseMI GCAATG 1 cut(s) 476
BseMII CTCAG 3 cut(s) 89, 1137, 1596
BseNI ACTGG 5 cut(s) 51, 152, 761, 890, 956
BseRI GAGGAG 2 cut(s) 72, 696
BseXI GCAGC 9 cut(s) 158, 226, 271, 332, 334, 703, 815, 1217, 1551
BsgI GTGCAG 2 cut(s) 146, 357
BshFI GGCC 2 cut(s) 1524, 1712
BshVI ATCGAT 1 cut(s) 978
BsiSI CCGG 2 cut(s) 636, 834
BslFI GGGAC 2 cut(s) 56, 1289
BslI CCNNNNNNNGG 1 cut(s) 261
BsmAI GTCTC 2 cut(s) 138, 381
BsmFI GGGAC 2 cut(s) 56, 1289
BsmI GAATGC 1 cut(s) 806
BsnI GGCC 2 cut(s) 1524, 1712
Bsp143I GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
Bsp19I CCATGG 1 cut(s) 1653
BspACI CCGC 1 cut(s) 262
BspANI GGCC 2 cut(s) 1524, 1712
BspCNI CTCAG 3 cut(s) 88, 1136, 1595
BspDI ATCGAT 1 cut(s) 978
BspLI GGNNCC 2 cut(s) 1118, 1163
BspMI ACCTGC 2 cut(s) 329, 522
BspPI GGATC 6 cut(s) 491, 664, 1156, 1169, 1373, 1553
BsrDI GCAATG 1 cut(s) 476
BsrI ACTGG 5 cut(s) 51, 152, 761, 890, 956
BssECI CCNNGG 3 cut(s) 901, 1270, 1653
BssMI GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
BssT1I CCWWGG 3 cut(s) 901, 1270, 1653
Bst2UI CCWGG 1 cut(s) 1159
Bst4CI ACNGT 5 cut(s) 95, 504, 595, 942, 1067
BstBAI YACGTR 1 cut(s) 1218
BstC8I GCNNGC 3 cut(s) 219, 1537, 1614
BstDEI CTNAG 8 cut(s) 6, 75, 453, 884, 1123, 1314, 1582, 1634
BstDSI CCRYGG 1 cut(s) 1653
BstEII GGTNACC 1 cut(s) 49
BstF5I GGATG 4 cut(s) 119, 443, 820, 1649
BstH2I RGCGCY 1 cut(s) 1194
BstHHI GCGC 1 cut(s) 1193
BstKTI GATC 8 cut(s) 499, 631, 672, 855, 1164, 1320, 1381, 1561
BstMAI GTCTC 2 cut(s) 138, 381
BstMBI GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstNI CCWGG 1 cut(s) 1159
BstPI GGTNACC 1 cut(s) 49
BstSCI CCNGG 2 cut(s) 635, 1157
BstSFI CTRYAG 4 cut(s) 94, 873, 1070, 1426
BstV1I GCAGC 9 cut(s) 158, 226, 271, 332, 334, 703, 815, 1217, 1551
BstX2I RGATCY 1 cut(s) 1161
BstYI RGATCY 1 cut(s) 1161
Bsu15I ATCGAT 1 cut(s) 978
BsuI GTATCC 1 cut(s) 1230
BsuRI GGCC 2 cut(s) 1524, 1712
BsuTUI ATCGAT 1 cut(s) 978
BtgI CCRYGG 1 cut(s) 1653
BtgZI GCGATG 1 cut(s) 771
BtsCI GGATG 4 cut(s) 119, 443, 820, 1649
BtsI GCAGTG 1 cut(s) 1496
BtsIMutI CAGTG 1 cut(s) 1496
BveI ACCTGC 2 cut(s) 329, 522
Cac8I GCNNGC 3 cut(s) 219, 1537, 1614
CfoI GCGC 1 cut(s) 1193
Cfr13I GGNCC 1 cut(s) 489
ClaI ATCGAT 1 cut(s) 978
Csp6I GTAC 4 cut(s) 196, 741, 893, 1442
CviAII CATG 7 cut(s) 280, 486, 1403, 1623, 1654, 1688, 1758
CviQI GTAC 4 cut(s) 196, 741, 893, 1442
DdeI CTNAG 8 cut(s) 6, 75, 453, 884, 1123, 1314, 1582, 1634
DpnI GATC 8 cut(s) 498, 630, 671, 854, 1163, 1319, 1380, 1560
DpnII GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
Eco130I CCWWGG 3 cut(s) 901, 1270, 1653
Eco147I AGGCCT 2 cut(s) 1524, 1712
Eco47I GGWCC 1 cut(s) 489
Eco47III AGCGCT 1 cut(s) 1192
Eco57I CTGAAG 2 cut(s) 1592, 1743
Eco91I GGTNACC 1 cut(s) 49
EcoO65I GGTNACC 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 1157
EcoT14I CCWWGG 3 cut(s) 901, 1270, 1653
ErhI CCWWGG 3 cut(s) 901, 1270, 1653
FaeI CATG 7 cut(s) 283, 489, 1406, 1626, 1657, 1691, 1761
FaqI GGGAC 2 cut(s) 56, 1289
FatI CATG 7 cut(s) 279, 485, 1402, 1622, 1653, 1687, 1757
FbaI TGATCA 1 cut(s) 628
FblI GTMKAC 2 cut(s) 1069, 1425
Fnu4HI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 717, 804, 1231, 1540
FokI GGATG 4 cut(s) 106, 450, 827, 1636
Fsp4HI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 717, 804, 1231, 1540
FspBI CTAG 3 cut(s) 24, 330, 375
GlaI GCGC 1 cut(s) 1192
GluI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 717, 804, 1231, 1540
GsuI CTGGAG 1 cut(s) 1437
HaeII RGCGCY 1 cut(s) 1194
HaeIII GGCC 2 cut(s) 1524, 1712
HapII CCGG 2 cut(s) 636, 834
HhaI GCGC 1 cut(s) 1193
Hin1II CATG 7 cut(s) 283, 489, 1406, 1626, 1657, 1691, 1761
Hin6I GCGC 1 cut(s) 1191
HinP1I GCGC 1 cut(s) 1191
HindIII AAGCTT 2 cut(s) 1018, 1590
HinfI GANTC 4 cut(s) 248, 830, 995, 1483
HpaII CCGG 2 cut(s) 636, 834
HphI GGTGA 5 cut(s) 43, 377, 559, 917, 1343
Hpy166II GTNNAC 2 cut(s) 1070, 1426
Hpy188III TCNNGA 8 cut(s) 245, 1165, 1223, 1244, 1382, 1416, 1461, 1721
Hpy8I GTNNAC 2 cut(s) 1070, 1426
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 4 cut(s) 110, 634, 902, 1220
HpyCH4III ACNGT 5 cut(s) 95, 504, 595, 942, 1067
HpyCH4IV ACGT 3 cut(s) 661, 739, 1217
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 8 cut(s) 6, 75, 453, 884, 1123, 1314, 1582, 1634
HpySE526I ACGT 3 cut(s) 661, 739, 1217
Hsp92II CATG 7 cut(s) 283, 489, 1406, 1626, 1657, 1691, 1761
HspAI GCGC 1 cut(s) 1191
Ksp22I TGATCA 1 cut(s) 628
Kzo9I GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
LmnI GCTCC 2 cut(s) 683, 1657
Lsp1109I GCAGC 9 cut(s) 158, 226, 271, 332, 334, 703, 815, 1217, 1551
LweI GCATC 1 cut(s) 1551
MaeI CTAG 3 cut(s) 24, 330, 375
MaeII ACGT 3 cut(s) 661, 739, 1217
MaeIII GTNAC 8 cut(s) 49, 370, 416, 547, 709, 1048, 1061, 1244
MalI GATC 8 cut(s) 498, 630, 671, 854, 1163, 1319, 1380, 1560
MboI GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
MboII GAAGA 4 cut(s) 31, 307, 1088, 1404
MfeI CAATTG 1 cut(s) 1182
MflI RGATCY 1 cut(s) 1161
MlyI GAGTC 3 cut(s) 242, 839, 1004
MseI TTAA 5 cut(s) 510, 825, 966, 1505, 1527
MslI CAYNNNNRTG 1 cut(s) 108
MspA1I CMGCKG 4 cut(s) 262, 325, 716, 1612
MspI CCGG 2 cut(s) 636, 834
MspR9I CCNGG 2 cut(s) 637, 1159
MunI CAATTG 1 cut(s) 1182
Mva1269I GAATGC 1 cut(s) 806
MvaI CCWGG 1 cut(s) 1159
MwoI GCNNNNNNNGC 1 cut(s) 16
NciI CCSGG 1 cut(s) 637
NcoI CCATGG 1 cut(s) 1653
NdeII GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
NlaIII CATG 7 cut(s) 283, 489, 1406, 1626, 1657, 1691, 1761
NlaIV GGNNCC 2 cut(s) 1118, 1163
NmuCI GTSAC 3 cut(s) 49, 547, 1244
PaqCI CACCTGC 1 cut(s) 329
PceI AGGCCT 2 cut(s) 1524, 1712
PctI GAATGC 1 cut(s) 806
PfeI GAWTC 1 cut(s) 1483
PfoI TCCNGGA 1 cut(s) 1157
PkrI GCNGC 9 cut(s) 173, 216, 261, 324, 347, 718, 805, 1232, 1541
PleI GAGTC 3 cut(s) 242, 838, 1003
PpsI GAGTC 3 cut(s) 242, 838, 1003
Ppu21I YACGTR 1 cut(s) 1218
PsiI TTATAA 1 cut(s) 600
Psp6I CCWGG 1 cut(s) 1157
PspEI GGTNACC 1 cut(s) 49
PspGI CCWGG 1 cut(s) 1157
PspN4I GGNNCC 2 cut(s) 1118, 1163
PspPI GGNCC 1 cut(s) 489
PsuI RGATCY 1 cut(s) 1161
PvuII CAGCTG 3 cut(s) 325, 716, 1612
RsaI GTAC 4 cut(s) 197, 742, 894, 1443
RsaNI GTAC 4 cut(s) 196, 741, 893, 1442
RseI CAYNNNNRTG 1 cut(s) 108
SaqAI TTAA 5 cut(s) 510, 825, 966, 1505, 1527
SatI GCNGC 9 cut(s) 172, 215, 260, 323, 346, 717, 804, 1231, 1540
Sau3AI GATC 8 cut(s) 496, 628, 669, 852, 1161, 1317, 1378, 1558
Sau96I GGNCC 1 cut(s) 489
SchI GAGTC 3 cut(s) 242, 839, 1004
ScrFI CCNGG 2 cut(s) 637, 1159
SfaNI GCATC 1 cut(s) 1551
SfcI CTRYAG 4 cut(s) 94, 873, 1070, 1426
SinI GGWCC 1 cut(s) 489
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 4 cut(s) 556, 608, 1172, 1194
SmoI CTYRAG 4 cut(s) 556, 608, 1172, 1194
SpeI ACTAGT 2 cut(s) 329, 374
SseBI AGGCCT 2 cut(s) 1524, 1712
SsiI CCGC 1 cut(s) 262
SspI AATATT 1 cut(s) 186
SspMI CTAG 3 cut(s) 24, 330, 375
StuI AGGCCT 2 cut(s) 1524, 1712
StyD4I CCNGG 2 cut(s) 635, 1157
StyI CCWWGG 3 cut(s) 901, 1270, 1653
TaaI ACNGT 5 cut(s) 95, 504, 595, 942, 1067
TaiI ACGT 3 cut(s) 664, 742, 1220
TaqI TCGA 4 cut(s) 89, 944, 978, 1569
TatI WGTACW 2 cut(s) 892, 1441
TfiI GAWTC 1 cut(s) 1483
Tru1I TTAA 5 cut(s) 510, 825, 966, 1505, 1527
Tru9I TTAA 5 cut(s) 510, 825, 966, 1505, 1527
TscAI CASTG 1 cut(s) 1503
TseFI GTSAC 3 cut(s) 49, 547, 1244
TseI GCWGC 9 cut(s) 171, 214, 259, 322, 345, 716, 803, 1230, 1539
Tsp45I GTSAC 3 cut(s) 49, 547, 1244
TspDTI ATGAA 6 cut(s) 31, 92, 999, 1229, 1496, 1563
TspGWI ACGGA 1 cut(s) 75
TspRI CASTG 1 cut(s) 1503
VpaK11BI GGWCC 1 cut(s) 489
XapI RAATTY 5 cut(s) 287, 846, 1010, 1408, 1550
XmiI GTMKAC 2 cut(s) 1069, 1425
XspI CTAG 3 cut(s) 24, 330, 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.