Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0005183

Physical Location & Seq

Genomic Coordinates Forward (+)

70923545 .. 70926110

Gene Structure 2566 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG409300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGCTAGACTCATCTCGATTTTCTGTAGTTATAGTCAAATGAAGTATAGACAAGTACCACCCCTTTTGATTCTAGTCCTTGTGTTCCTCACTGCCTTGAATTTTGTTGTCTCACAAGCCCCTGGTGCAGTATGTGTCCTTGATATTCAACAATCTTCATCTTGGAGTAGCTCAAGTTGTGAAGCAGGCACTTGGGGAGGGTTTGTCAGTAATTGTAATTGCGGAGCAGCTTTTGATGACTACCTATCTGCCTTGGGACGCAGGGCAAACCACACTGGTAGACAGCTCTTCTTAAATTCAACAGGGCAGGAAAACTGCTTAGATTTGATGAAGAGTATCAAAAGTGATGTTTTCAGTTGTGGAATTGATAAGCTAACGAGTGGAGGTGGTGGCTGCTCTGACTATACTAAACTAGATGTTGTTCATAATCTAGGTAGCACATTGCAAGATTTAGGCGAAGACTGTAAACTTCTGGGGGCAGCTGGAATATCTGATCAGGCTTGCAGTTCTTGTTTGGGAAAGTGGGAAGAGATTATTGCATCATCAGATAGTAGGGAGTCATCAAAAGTTGAAGCCAATATTTGTGGTTTTGCAGTTTTGGTGTCTTTAACTAGCAACAGGATTCATGACAAGAATTGGGTTCAAGCAGTTTATCAATGCCTTGGAAATCATATACTTTCAGATTCCGGAGATCAGCGACAGAAAAAACCAAAAAGCAGCTTTCTAAAACTGAAGACAGGTCTTTGGATTCTATCTGGTGGTCTAGCAGGAATTACTGTAATATTAGCAATAAGTATGTGGACCTTATGCAAGAAAAAGAAGCCAGTAGAGATCTTTTCAACTGCAAAAGATAAAAAAGAAGATGATCCAAATGATTCACTGACTCAAGAATCCAGCCTCAAAATATCAACTAAACACATTTATTCAGCAACCGACAATTTAAATGCATCGAACTTCATTGGCCAAGGTGGAGCTGGAAAGGTATACAAAGGTGTACTCTTAAATGGGCTTGAGGTTGCAGTCAAGCACATAATCAATGATGGATATGTATCCATCGAGACATTCGTCAGAGAAGTGACAAGCCTTTCACATGTTAGACATCCAAACCTTGTAGCATTACTTGGACATTGCGTAGATACAGAAGAATGTTTCCTGGTGTATGAATTGTGCCACAATGGGAACCTCTCGGAGTGGCTATTTGGAAAAGATAGAAGTCTACCATGGATTCAGAGACTTGAGATTGCAATTGATAGTGCAAGGGGTCTTTGGTTTCTTCACACTTTTCCACAAGGCTGCATTGTTCACCGTGATGTCAAGCCAACAAACATACTCATCACTGCCAACTTTCAAGCAAAACTGTCCGACTTTGGGTTATCTAAAGTTATGGACGTGGGGCAGTCCTATGTGAGCTCCGAAGTGAGAGGAACATTTGGTTATGTTGATCCTGAGTACCGAAAGAATCACCATGTAAATGCTTTGGGAGATGTCTACAGTTTCGGGATAGTTCTTCTGCAACTTATCTCAGGGCGCAGGGTTATCAATCTGAATTCCAACACACCAATGTCTCTTAATAAGATAGCCAGGGGTCTCACAAAAGGCGGTGATGTTATGGAGTTTGCTGATCCCAAACTTAACGGGGAGTACTCGGTTGCAGCCTTTGAAATTATAGTCAAACTAGCTTTGTCATGCACAGGACTAAAGCAACAAAGACCACGCATGGAGGAGGTGGTATCAAGACTAGAAAAGGCACTACATATCTCCACACAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

590

Amino Acids

64.56

Weight (kDa)

7.78

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	44 - 187	1.7e-08	SPARK
Pkinase	PF00069	317 - 522	2.6e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	317 - 512	8.9e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005183)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g27000 FvH4_4g34600
malus_domestica	MD09G1035700.v1.1 MD13G1090700.v1.1 MD13G1091000.v1.1
prunus_persica	Prupe.1G254900_v2.0.a1 Prupe.3G282300_v2.0.a1
pyrus_communis	pycom16g07810
rosa_chinensis	RchiOBHm_Chr2g0170941 RchiOBHm_Chr4g0443971
rosa_laevigata	RLG00000005871 RLG00000021994
rosa_multiflora	Rmu_sc0010716.1_g000005 Rmu_sc0025148.1_g000001 Rmu_sc0027702.1_g000001 Rmu_sc0029481.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080960 Rroxscaffold_5G00384520
rosa_rugosa	Rorug02G0552500 Rorug04G0348600
rosa_samantha	Rh2AG625300 Rh2BG636100 Rh2CG604600 Rh2DG647700 Rh4AG409300 Rh4BG420400 Rh4CG434400 Rh4DG415400
rosa_wichuraiana	Rw2G051790 Rw4G035160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	4 cut(s)	280, 984, 1216, 1488
AccIII	TCCGGA	1 cut(s)	686
AciI	CCGC	2 cut(s)	222, 1599
AclWI	GGATC	3 cut(s)	860, 1436, 1616
AcoI	YGGCCR	1 cut(s)	961
AcsI	RAATTY	3 cut(s)	100, 295, 1546
AcuI	CTGAAG	1 cut(s)	752
AfaI	GTAC	4 cut(s)	57, 996, 1451, 1643
AfiI	CCNNNNNNNGG	1 cut(s)	1368
AflIII	ACRYGT	1 cut(s)	1090
AgsI	TTSAA	8 cut(s)	100, 149, 300, 572, 644, 840, 1349, 1661
AjiI	CACGTC	1 cut(s)	1390
AjnI	CCWGG	3 cut(s)	121, 1152, 1580
AluBI	AGCT	9 cut(s)	171, 230, 286, 373, 482, 720, 974, 1410, 1679
AluI	AGCT	9 cut(s)	171, 230, 286, 373, 482, 720, 974, 1410, 1679
Alw21I	GWGCWC	1 cut(s)	1412
Alw26I	GTCTC	5 cut(s)	115, 1052, 1225, 1569, 1592
AlwI	GGATC	3 cut(s)	860, 1436, 1616
Aor13HI	TCCGGA	1 cut(s)	686
AoxI	GGCC	1 cut(s)	961
ApeKI	GCWGC	6 cut(s)	227, 393, 479, 717, 1293, 1652
ApoI	RAATTY	3 cut(s)	100, 295, 1546
AspLEI	GCGC	1 cut(s)	1530
AspS9I	GGNCC	1 cut(s)	801
AsuHPI	GGTGA	3 cut(s)	1295, 1454, 1613
AvaII	GGWCC	1 cut(s)	801
BalI	TGGCCA	1 cut(s)	963
BanII	GRGCYC	1 cut(s)	1412
BbsI	GAAGAC	2 cut(s)	465, 740
Bbv12I	GWGCWC	1 cut(s)	1412
BbvI	GCAGC	6 cut(s)	239, 380, 491, 729, 1280, 1664
BccI	CCATC	2 cut(s)	1034, 1061
BciT130I	CCWGG	3 cut(s)	123, 1154, 1582
BciVI	GTATCC	1 cut(s)	1060
BclI	TGATCA	1 cut(s)	493
BcoDI	GTCTC	5 cut(s)	115, 1052, 1225, 1569, 1592
BfaI	CTAG	8 cut(s)	6, 74, 413, 431, 612, 764, 1676, 1739
BfmI	CTRYAG	2 cut(s)	25, 1489
BfuI	GTATCC	1 cut(s)	1060
BglII	AGATCT	1 cut(s)	831
BisI	GCNGC	6 cut(s)	228, 394, 480, 718, 1294, 1653
BlsI	GCNGC	6 cut(s)	229, 395, 481, 719, 1295, 1654
BmcAI	AGTACT	1 cut(s)	1643
Bme1390I	CCNGG	3 cut(s)	123, 1154, 1582
Bme18I	GGWCC	1 cut(s)	801
BmgBI	CACGTC	1 cut(s)	1390
BmgT120I	GGNCC	1 cut(s)	801
BmiI	GGNNCC	1 cut(s)	1181
BmrFI	CCNGG	3 cut(s)	123, 1154, 1582
BmsI	GCATC	2 cut(s)	548, 956
BoxI	GACNNNNGTC	1 cut(s)	1064
BpiI	GAAGAC	2 cut(s)	465, 740
BpuEI	CTTGAG	4 cut(s)	157, 870, 1031, 1256
BsaBI	GATNNNNATC	1 cut(s)	1048
BsaI	GGTCTC	1 cut(s)	1592
BsaJI	CCNNGG	6 cut(s)	121, 252, 661, 964, 1220, 1581
BsaWI	WCCGGW	1 cut(s)	686
BsaXI	ACNNNNNCTCC	2 cut(s)	189, 219
Bsc4I	CCNNNNNNNGG	1 cut(s)	1368
Bse1I	ACTGG	2 cut(s)	280, 824
Bse3DI	GCAATG	2 cut(s)	440, 1126
Bse8I	GATNNNNATC	1 cut(s)	1048
BseAI	TCCGGA	1 cut(s)	686
BseBI	CCWGG	3 cut(s)	123, 1154, 1582
BseDI	CCNNGG	6 cut(s)	121, 252, 661, 964, 1220, 1581
BseGI	GGATG	1 cut(s)	1099
BseJI	GATNNNNATC	1 cut(s)	1048
BseLI	CCNNNNNNNGG	1 cut(s)	1368
BseMI	GCAATG	2 cut(s)	440, 1126
BseMII	CTCAG	2 cut(s)	1437, 1536
BseNI	ACTGG	2 cut(s)	280, 824
BseRI	GAGGAG	1 cut(s)	1736
BseXI	GCAGC	6 cut(s)	239, 380, 491, 729, 1280, 1664
BsgI	GTGCAG	1 cut(s)	147
BshFI	GGCC	1 cut(s)	963
BsiHKAI	GWGCWC	1 cut(s)	1412
BsiSI	CCGG	1 cut(s)	687
BslFI	GGGAC	1 cut(s)	270
BslI	CCNNNNNNNGG	1 cut(s)	1368
BsmAI	GTCTC	5 cut(s)	115, 1052, 1225, 1569, 1592
BsmFI	GGGAC	1 cut(s)	270
BsnI	GGCC	1 cut(s)	963
Bso31I	GGTCTC	1 cut(s)	1592
Bsp1286I	GDGCHC	1 cut(s)	1412
Bsp13I	TCCGGA	1 cut(s)	686
Bsp143I	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
Bsp19I	CCATGG	1 cut(s)	1220
BspACI	CCGC	2 cut(s)	222, 1599
BspANI	GGCC	1 cut(s)	963
BspCNI	CTCAG	2 cut(s)	1438, 1535
BspEI	TCCGGA	1 cut(s)	686
BspHI	TCATGA	1 cut(s)	625
BspLI	GGNNCC	1 cut(s)	1181
BspPI	GGATC	3 cut(s)	860, 1436, 1616
BspQI	GCTCTTC	1 cut(s)	293
BspTNI	GGTCTC	1 cut(s)	1592
BsrDI	GCAATG	2 cut(s)	440, 1126
BsrI	ACTGG	2 cut(s)	280, 824
BssECI	CCNNGG	6 cut(s)	121, 252, 661, 964, 1220, 1581
BssMI	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
BssNAI	GTATAC	1 cut(s)	985
BssT1I	CCWWGG	4 cut(s)	252, 661, 964, 1220
Bst1107I	GTATAC	1 cut(s)	985
Bst2UI	CCWGG	3 cut(s)	123, 1154, 1582
Bst4CI	ACNGT	5 cut(s)	464, 778, 1307, 1359, 1493
Bst6I	CTCTTC	3 cut(s)	293, 326, 522
BstC8I	GCNNGC	2 cut(s)	187, 502
BstDEI	CTNAG	3 cut(s)	319, 1446, 1522
BstDSI	CCRYGG	1 cut(s)	1220
BstF5I	GGATG	1 cut(s)	1099
BstHHI	GCGC	1 cut(s)	1530
BstKTI	GATC	6 cut(s)	496, 694, 834, 868, 1444, 1624
BstMAI	GTCTC	5 cut(s)	115, 1052, 1225, 1569, 1592
BstMBI	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
BstMWI	GCNNNNNNNGC	1 cut(s)	125
BstNI	CCWGG	3 cut(s)	123, 1154, 1582
BstNSI	RCATGY	1 cut(s)	1094
BstPAI	GACNNNNGTC	1 cut(s)	1064
BstSCI	CCNGG	3 cut(s)	121, 1152, 1580
BstSFI	CTRYAG	2 cut(s)	25, 1489
BstV1I	GCAGC	6 cut(s)	239, 380, 491, 729, 1280, 1664
BstV2I	GAAGAC	2 cut(s)	465, 740
BstX2I	RGATCY	1 cut(s)	831
BstYI	RGATCY	1 cut(s)	831
BstZ17I	GTATAC	1 cut(s)	985
BsuI	GTATCC	1 cut(s)	1060
BsuRI	GGCC	1 cut(s)	963
BtgI	CCRYGG	1 cut(s)	1220
BtrI	CACGTC	1 cut(s)	1390
BtsCI	GGATG	1 cut(s)	1099
BtsI	GCAGTG	2 cut(s)	90, 1335
BtsIMutI	CAGTG	4 cut(s)	90, 273, 878, 1335
Cac8I	GCNNGC	2 cut(s)	187, 502
CciI	TCATGA	1 cut(s)	625
CfoI	GCGC	1 cut(s)	1530
Cfr13I	GGNCC	1 cut(s)	801
CseI	GACGC	1 cut(s)	267
Csp6I	GTAC	4 cut(s)	56, 995, 1450, 1642
CspCI	CAANNNNNGTGG	4 cut(s)	48, 83, 565, 600
CviAII	CATG	6 cut(s)	626, 1091, 1221, 1466, 1686, 1717
CviQI	GTAC	4 cut(s)	56, 995, 1450, 1642
DdeI	CTNAG	3 cut(s)	319, 1446, 1522
DpnI	GATC	6 cut(s)	495, 693, 833, 867, 1443, 1623
DpnII	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
DraI	TTTAAA	1 cut(s)	942
EaeI	YGGCCR	1 cut(s)	961
Eam1104I	CTCTTC	3 cut(s)	293, 326, 522
EarI	CTCTTC	3 cut(s)	293, 326, 522
Ecl136II	GAGCTC	1 cut(s)	1410
Eco130I	CCWWGG	4 cut(s)	252, 661, 964, 1220
Eco24I	GRGCYC	1 cut(s)	1412
Eco31I	GGTCTC	1 cut(s)	1592
Eco47I	GGWCC	1 cut(s)	801
Eco53kI	GAGCTC	1 cut(s)	1410
Eco57I	CTGAAG	1 cut(s)	752
EcoICRI	GAGCTC	1 cut(s)	1410
EcoRI	GAATTC	1 cut(s)	1546
EcoRII	CCWGG	3 cut(s)	121, 1152, 1580
EcoT14I	CCWWGG	4 cut(s)	252, 661, 964, 1220
EcoT22I	ATGCAT	1 cut(s)	949
EcoT38I	GRGCYC	1 cut(s)	1412
ErhI	CCWWGG	4 cut(s)	252, 661, 964, 1220
FaeI	CATG	6 cut(s)	629, 1094, 1224, 1469, 1689, 1720
FaqI	GGGAC	1 cut(s)	270
FatI	CATG	6 cut(s)	625, 1090, 1220, 1465, 1685, 1716
FbaI	TGATCA	1 cut(s)	493
FblI	GTMKAC	4 cut(s)	280, 984, 1216, 1488
Fnu4HI	GCNGC	6 cut(s)	228, 394, 480, 718, 1294, 1653
FokI	GGATG	1 cut(s)	1086
FriOI	GRGCYC	1 cut(s)	1412
Fsp4HI	GCNGC	6 cut(s)	228, 394, 480, 718, 1294, 1653
FspBI	CTAG	8 cut(s)	6, 74, 413, 431, 612, 764, 1676, 1739
GlaI	GCGC	1 cut(s)	1529
GluI	GCNGC	6 cut(s)	228, 394, 480, 718, 1294, 1653
HaeIII	GGCC	1 cut(s)	963
HapII	CCGG	1 cut(s)	687
HgaI	GACGC	1 cut(s)	267
HhaI	GCGC	1 cut(s)	1530
Hin1II	CATG	6 cut(s)	629, 1094, 1224, 1469, 1689, 1720
Hin6I	GCGC	1 cut(s)	1528
HinP1I	GCGC	1 cut(s)	1528
HpaII	CCGG	1 cut(s)	687
HphI	GGTGA	3 cut(s)	1295, 1454, 1613
Hpy166II	GTNNAC	8 cut(s)	281, 467, 801, 985, 995, 1217, 1303, 1489
Hpy188III	TCNNGA	8 cut(s)	16, 626, 687, 887, 1057, 1445, 1498, 1734
Hpy8I	GTNNAC	8 cut(s)	281, 467, 801, 985, 995, 1217, 1303, 1489
HpyCH4III	ACNGT	5 cut(s)	464, 778, 1307, 1359, 1493
HpyCH4IV	ACGT	1 cut(s)	1389
HpyF10VI	GCNNNNNNNGC	1 cut(s)	125
HpyF3I	CTNAG	3 cut(s)	319, 1446, 1522
HpySE526I	ACGT	1 cut(s)	1389
Hsp92II	CATG	6 cut(s)	629, 1094, 1224, 1469, 1689, 1720
HspAI	GCGC	1 cut(s)	1528
Kpn2I	TCCGGA	1 cut(s)	686
Ksp22I	TGATCA	1 cut(s)	493
Kzo9I	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	3 cut(s)	224, 971, 1415
Lsp1109I	GCAGC	6 cut(s)	239, 380, 491, 729, 1280, 1664
LweI	GCATC	2 cut(s)	548, 956
MaeI	CTAG	8 cut(s)	6, 74, 413, 431, 612, 764, 1676, 1739
MaeII	ACGT	1 cut(s)	1389
MaeIII	GTNAC	1 cut(s)	1075
MalI	GATC	6 cut(s)	495, 693, 833, 867, 1443, 1623
MboI	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
MfeI	CAATTG	1 cut(s)	1245
MflI	RGATCY	1 cut(s)	831
MhlI	GDGCHC	1 cut(s)	1412
MlsI	TGGCCA	1 cut(s)	963
MluNI	TGGCCA	1 cut(s)	963
MlyI	GAGTC	3 cut(s)	3, 566, 877
MmeI	TCCRAC	2 cut(s)	1386, 1575
MnlI	CCTC	9 cut(s)	98, 191, 377, 908, 1006, 1193, 1415, 1714, 1717
Mox20I	TGGCCA	1 cut(s)	963
Mph1103I	ATGCAT	1 cut(s)	949
MroI	TCCGGA	1 cut(s)	686
MscI	TGGCCA	1 cut(s)	963
MseI	TTAA	6 cut(s)	293, 608, 941, 1001, 1569, 1632
MslI	CAYNNNNRTG	4 cut(s)	1308, 1470, 1559, 1766
Msp20I	TGGCCA	1 cut(s)	963
MspA1I	CMGCKG	1 cut(s)	482
MspI	CCGG	1 cut(s)	687
MspR9I	CCNGG	3 cut(s)	123, 1154, 1582
MunI	CAATTG	1 cut(s)	1245
MvaI	CCWGG	3 cut(s)	123, 1154, 1582
MwoI	GCNNNNNNNGC	1 cut(s)	125
NcoI	CCATGG	1 cut(s)	1220
NdeII	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
NlaIII	CATG	6 cut(s)	629, 1094, 1224, 1469, 1689, 1720
NlaIV	GGNNCC	1 cut(s)	1181
NmuCI	GTSAC	1 cut(s)	1075
NsiI	ATGCAT	1 cut(s)	949
NspI	RCATGY	1 cut(s)	1094
PagI	TCATGA	1 cut(s)	625
PciI	ACATGT	1 cut(s)	1090
PciSI	GCTCTTC	1 cut(s)	293
PcsI	WCGNNNNNNNCGW	1 cut(s)	1062
PfeI	GAWTC	8 cut(s)	70, 622, 683, 748, 875, 890, 1225, 1459
PkrI	GCNGC	6 cut(s)	229, 395, 481, 719, 1295, 1654
PleI	GAGTC	3 cut(s)	3, 565, 877
PpsI	GAGTC	3 cut(s)	3, 565, 877
PscI	ACATGT	1 cut(s)	1090
PshAI	GACNNNNGTC	1 cut(s)	1064
Psp124BI	GAGCTC	1 cut(s)	1412
Psp6I	CCWGG	3 cut(s)	121, 1152, 1580
PspGI	CCWGG	3 cut(s)	121, 1152, 1580
PspN4I	GGNNCC	1 cut(s)	1181
PspPI	GGNCC	1 cut(s)	801
PsuI	RGATCY	1 cut(s)	831
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	4 cut(s)	57, 996, 1451, 1643
RsaNI	GTAC	4 cut(s)	56, 995, 1450, 1642
RseI	CAYNNNNRTG	4 cut(s)	1308, 1470, 1559, 1766
SacI	GAGCTC	1 cut(s)	1412
SapI	GCTCTTC	1 cut(s)	293
SaqAI	TTAA	6 cut(s)	293, 608, 941, 1001, 1569, 1632
SatI	GCNGC	6 cut(s)	228, 394, 480, 718, 1294, 1653
Sau3AI	GATC	6 cut(s)	493, 691, 831, 865, 1441, 1621
Sau96I	GGNCC	1 cut(s)	801
ScaI	AGTACT	1 cut(s)	1643
SchI	GAGTC	3 cut(s)	3, 566, 877
ScrFI	CCNGG	3 cut(s)	123, 1154, 1582
SduI	GDGCHC	1 cut(s)	1412
SfaNI	GCATC	2 cut(s)	548, 956
SfcI	CTRYAG	2 cut(s)	25, 1489
SinI	GGWCC	1 cut(s)	801
SmiI	ATTTAAAT	1 cut(s)	942
SmiMI	CAYNNNNRTG	4 cut(s)	1308, 1470, 1559, 1766
SmlI	CTYRAG	4 cut(s)	172, 885, 1010, 1235
SmoI	CTYRAG	4 cut(s)	172, 885, 1010, 1235
SsiI	CCGC	2 cut(s)	222, 1599
SspI	AATATT	2 cut(s)	580, 783
SspMI	CTAG	8 cut(s)	6, 74, 413, 431, 612, 764, 1676, 1739
SstI	GAGCTC	1 cut(s)	1412
StyD4I	CCNGG	3 cut(s)	121, 1152, 1580
StyI	CCWWGG	4 cut(s)	252, 661, 964, 1220
SwaI	ATTTAAAT	1 cut(s)	942
TaaI	ACNGT	5 cut(s)	464, 778, 1307, 1359, 1493
TaiI	ACGT	1 cut(s)	1392
TaqI	TCGA	3 cut(s)	17, 950, 1056
TatI	WGTACW	2 cut(s)	994, 1641
TfiI	GAWTC	8 cut(s)	70, 622, 683, 748, 875, 890, 1225, 1459
Tru1I	TTAA	6 cut(s)	293, 608, 941, 1001, 1569, 1632
Tru9I	TTAA	6 cut(s)	293, 608, 941, 1001, 1569, 1632
TscAI	CASTG	4 cut(s)	97, 280, 885, 1342
TseFI	GTSAC	1 cut(s)	1075
TseI	GCWGC	6 cut(s)	227, 393, 479, 717, 1293, 1652
Tsp45I	GTSAC	1 cut(s)	1075
TspDTI	ATGAA	7 cut(s)	56, 147, 344, 413, 614, 946, 1176
TspRI	CASTG	4 cut(s)	97, 280, 885, 1342
VpaK11BI	GGWCC	1 cut(s)	801
XapI	RAATTY	3 cut(s)	100, 295, 1546
XceI	RCATGY	1 cut(s)	1094
XcmI	CCANNNNNNNNNTGG	1 cut(s)	971
XmiI	GTMKAC	4 cut(s)	280, 984, 1216, 1488
XspI	CTAG	8 cut(s)	6, 74, 413, 431, 612, 764, 1676, 1739
ZrmI	AGTACT	1 cut(s)	1643
Zsp2I	ATGCAT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.