Rmu_sc0011073.1_g000002

Axoneme-associated protein mst101(2)-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011073.1
Physical Location & Seq
Forward (+)
21920 .. 23594
1675 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011073.1_g000002.1.cds

Sequence Viewer

Length: 1029 bp
atgggcgagaaagtggaaggtgcgaagaatgagggcgacaagaaggccgccgacgccggaaagaaggtcgacggccctcccactgtcgtttttaagaccgacatgcattgcgagggatgcgccaagaaaatcaaacgagctgtcaaacacttccctggtgttgaacaagtgaagacagatgccggagccaacaaactgacggtgaccgggaaagtagacgccgccgctctgaaggcgaaactcgaggagaggattaggaagaaggtcgacctcgtctctcctcagccggccaaaaaggaaggaggcggtgaaggaggaggagacaagaagaaggcggaggaaaagtccgaaaagccctcggagaagaaagccgaggagaaaaagccggccgatcagcccaaagagaaagaggcccccaaagagagcacgatcgctttgaagatccggttgcattgcgagggttgcatccagaagatgcgcagtaaaatcttgaagttcaaaggtgttagtacggtggccttcgacatggccaaagatctggtcacggtggtgggcacgatggacaccaaagcgctagttccctatctgtcggagaagttcaagagaccggtcgacgtgatcgcgccggcgaagaaggacgacggcgccggagccaagaaagatgataagaaagcagctgccggaggcggcgagaagaaagacggaggtggtgacaagaaggaagctgcccccggaggcggtggaggcgagaagaaggaggagaagaaagaagctgctgctgccggcggcggtggaggtgcgatggtgaacaaaatggagtattccggctacccttacgcggcgtcgacgtcgtactggtacgaccccggacacgtttacaaccacaacaagtttgtgatggaggctcaggagcaccaggcgcatgttagccaagggtacgggaaccacaactacgcaatgcccatggagcactaccctgcgccgcagatgttcagcgacgagaaccccaacggttgttcggtgatgtga

Protein Analysis

342

Amino Acids

36.55

Weight (kDa)

9.09

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 851
Acc16I TGCGCA 1 cut(s) 479
AccB1I GGYRCC 1 cut(s) 644
AccBSI CCGCTC 1 cut(s) 227
AccI GTMKAC 5 cut(s) 69, 216, 267, 612, 845
AccII CGCG 2 cut(s) 623, 839
AclWI GGATC 1 cut(s) 436
AcoI YGGCCR 3 cut(s) 288, 387, 528
AcuI CTGAAG 1 cut(s) 251
AcyI GRCGYC 5 cut(s) 54, 219, 645, 842, 848
AfaI GTAC 4 cut(s) 511, 854, 860, 938
AfeI AGCGCT 1 cut(s) 573
AfiI CCNNNNNNNGG 2 cut(s) 737, 838
AflIII ACRYGT 1 cut(s) 871
AgeI ACCGGT 1 cut(s) 607
AgsI TTSAA 5 cut(s) 164, 439, 493, 499, 601
AjiI CACGTC 1 cut(s) 616
AjnI CCWGG 2 cut(s) 154, 915
AleI CACNNNNGTG 1 cut(s) 548
AluBI AGCT 4 cut(s) 140, 677, 725, 773
AluI AGCT 4 cut(s) 140, 677, 725, 773
Alw21I GWGCWC 3 cut(s) 428, 915, 972
Alw26I GTCTC 3 cut(s) 280, 315, 598
AlwI GGATC 1 cut(s) 436
Ama87I CYCGRG 1 cut(s) 242
Aor51HI AGCGCT 1 cut(s) 573
AoxI GGCC 7 cut(s) 45, 73, 288, 387, 411, 516, 528
ApeKI GCWGC 6 cut(s) 674, 677, 725, 773, 776, 779
ArsI GACNNNNNNTTYG 4 cut(s) 126, 158, 525, 557
AsiGI ACCGGT 1 cut(s) 607
AspLEI GCGC 7 cut(s) 122, 480, 574, 625, 647, 922, 982
AspS9I GGNCC 2 cut(s) 74, 412
AsuC2I CCSGG 3 cut(s) 208, 732, 867
AsuHPI GGTGA 4 cut(s) 214, 320, 722, 817
AvaI CYCGRG 1 cut(s) 242
BaeGI GKGCMC 1 cut(s) 557
BalI TGGCCA 1 cut(s) 530
BanI GGYRCC 1 cut(s) 644
BbsI GAAGAC 1 cut(s) 179
Bbv12I GWGCWC 3 cut(s) 428, 915, 972
BbvCI CCTCAGC 1 cut(s) 282
BbvI GCAGC 6 cut(s) 664, 686, 712, 760, 763, 766
BccI CCATC 3 cut(s) 553, 796, 892
BceAI ACGGC 2 cut(s) 88, 658
BciT130I CCWGG 2 cut(s) 156, 917
BcnI CCSGG 3 cut(s) 208, 732, 867
BcoDI GTCTC 3 cut(s) 280, 315, 598
BfaI CTAG 1 cut(s) 575
BfoI RGCGCY 2 cut(s) 575, 648
BglII AGATCT 1 cut(s) 535
Bme1390I CCNGG 5 cut(s) 156, 208, 732, 867, 917
BmeT110I CYCGRG 1 cut(s) 242
BmgBI CACGTC 1 cut(s) 616
BmgT120I GGNCC 2 cut(s) 74, 412
BmiI GGNNCC 5 cut(s) 187, 414, 646, 652, 944
BmrFI CCNGG 5 cut(s) 156, 208, 732, 867, 917
BmsI GCATC 4 cut(s) 107, 169, 465, 474
BpiI GAAGAC 1 cut(s) 179
Bpu10I CCTNAGC 2 cut(s) 282, 906
BpuMI CCSGG 3 cut(s) 208, 732, 867
BsaHI GRCGYC 5 cut(s) 54, 219, 645, 842, 848
BsaI GGTCTC 1 cut(s) 598
BsaJI CCNNGG 7 cut(s) 154, 357, 372, 730, 865, 931, 963
BsaWI WCCGGW 2 cut(s) 444, 607
BsaXI ACNNNNNCTCC 2 cut(s) 329, 359
Bsc4I CCNNNNNNNGG 2 cut(s) 737, 838
Bse118I RCCGGY 5 cut(s) 286, 385, 607, 625, 782
Bse1I ACTGG 1 cut(s) 860
Bse3DI GCAATG 3 cut(s) 106, 451, 963
BseBI CCWGG 2 cut(s) 156, 917
BseDI CCNNGG 7 cut(s) 154, 357, 372, 730, 865, 931, 963
BseGI GGATG 2 cut(s) 122, 465
BseLI CCNNNNNNNGG 2 cut(s) 737, 838
BseMI GCAATG 3 cut(s) 106, 451, 963
BseMII CTCAG 2 cut(s) 296, 920
BseNI ACTGG 1 cut(s) 860
BseRI GAGGAG 6 cut(s) 260, 270, 330, 333, 389, 773
BseSI GKGCMC 1 cut(s) 557
BseX3I CGGCCG 1 cut(s) 387
BseXI GCAGC 6 cut(s) 664, 686, 712, 760, 763, 766
Bsh1236I CGCG 2 cut(s) 623, 839
Bsh1285I CGRYCG 3 cut(s) 390, 432, 612
BshFI GGCC 7 cut(s) 47, 75, 290, 389, 413, 518, 530
BshNI GGYRCC 1 cut(s) 644
BshTI ACCGGT 1 cut(s) 607
BsiEI CGRYCG 3 cut(s) 390, 432, 612
BsiHKAI GWGCWC 3 cut(s) 428, 915, 972
BsiHKCI CYCGRG 1 cut(s) 242
BslI CCNNNNNNNGG 2 cut(s) 737, 838
BsmAI GTCTC 3 cut(s) 280, 315, 598
BsmBI CGTCTC 1 cut(s) 280
BsnI GGCC 7 cut(s) 47, 75, 290, 389, 413, 518, 530
Bso31I GGTCTC 1 cut(s) 598
BsoBI CYCGRG 1 cut(s) 242
Bsp1286I GDGCHC 4 cut(s) 428, 557, 915, 972
Bsp143I GATC 5 cut(s) 391, 429, 441, 535, 618
Bsp19I CCATGG 1 cut(s) 963
BspANI GGCC 7 cut(s) 47, 75, 290, 389, 413, 518, 530
BspCNI CTCAG 2 cut(s) 295, 919
BspFNI CGCG 2 cut(s) 623, 839
BspLI GGNNCC 5 cut(s) 187, 414, 646, 652, 944
BspPI GGATC 1 cut(s) 436
BspT107I GGYRCC 1 cut(s) 644
BspTNI GGTCTC 1 cut(s) 598
BsrBI CCGCTC 1 cut(s) 227
BsrDI GCAATG 3 cut(s) 106, 451, 963
BsrFI RCCGGY 5 cut(s) 286, 385, 607, 625, 782
BsrI ACTGG 1 cut(s) 860
BssAI RCCGGY 5 cut(s) 286, 385, 607, 625, 782
BssECI CCNNGG 7 cut(s) 154, 357, 372, 730, 865, 931, 963
BssMI GATC 5 cut(s) 391, 429, 441, 535, 618
BssNI GRCGYC 5 cut(s) 54, 219, 645, 842, 848
BssT1I CCWWGG 2 cut(s) 931, 963
Bst2UI CCWGG 2 cut(s) 156, 917
Bst4CI ACNGT 5 cut(s) 85, 202, 514, 547, 1013
BstACI GRCGYC 5 cut(s) 54, 219, 645, 842, 848
BstC8I GCNNGC 4 cut(s) 288, 387, 627, 784
BstDEI CTNAG 2 cut(s) 282, 906
BstDSI CCRYGG 1 cut(s) 963
BstEII GGTNACC 1 cut(s) 202
BstF5I GGATG 2 cut(s) 122, 465
BstFNI CGCG 2 cut(s) 623, 839
BstH2I RGCGCY 2 cut(s) 575, 648
BstHHI GCGC 7 cut(s) 122, 480, 574, 625, 647, 922, 982
BstKTI GATC 5 cut(s) 394, 432, 444, 538, 621
BstMAI GTCTC 3 cut(s) 280, 315, 598
BstMBI GATC 5 cut(s) 391, 429, 441, 535, 618
BstMCI CGRYCG 3 cut(s) 390, 432, 612
BstMWI GCNNNNNNNGC 8 cut(s) 53, 117, 233, 462, 744, 779, 919, 967
BstNI CCWGG 2 cut(s) 156, 917
BstNSI RCATGY 2 cut(s) 106, 926
BstPI GGTNACC 1 cut(s) 202
BstSCI CCNGG 5 cut(s) 154, 206, 730, 865, 915
BstSLI GKGCMC 1 cut(s) 557
BstUI CGCG 2 cut(s) 623, 839
BstV1I GCAGC 6 cut(s) 664, 686, 712, 760, 763, 766
BstV2I GAAGAC 1 cut(s) 179
BstX2I RGATCY 2 cut(s) 441, 535
BstXI CCANNNNNNTGG 1 cut(s) 538
BstYI RGATCY 2 cut(s) 441, 535
BstZI CGGCCG 1 cut(s) 387
BsuRI GGCC 7 cut(s) 47, 75, 290, 389, 413, 518, 530
BtgI CCRYGG 1 cut(s) 963
BtgZI GCGATG 1 cut(s) 815
BtrI CACGTC 1 cut(s) 616
BtsCI GGATG 2 cut(s) 122, 465
BtsIMutI CAGTG 1 cut(s) 81
Cac8I GCNNGC 4 cut(s) 288, 387, 627, 784
CfoI GCGC 7 cut(s) 122, 480, 574, 625, 647, 922, 982
Cfr10I RCCGGY 5 cut(s) 286, 385, 607, 625, 782
Cfr13I GGNCC 2 cut(s) 74, 412
CseI GACGC 3 cut(s) 62, 227, 831
Csp6I GTAC 4 cut(s) 510, 853, 859, 937
CspAI ACCGGT 1 cut(s) 607
CviAII CATG 4 cut(s) 103, 526, 923, 964
CviQI GTAC 4 cut(s) 510, 853, 859, 937
DdeI CTNAG 2 cut(s) 282, 906
DinI GGCGCC 1 cut(s) 646
DpnI GATC 5 cut(s) 393, 431, 443, 537, 620
DpnII GATC 5 cut(s) 391, 429, 441, 535, 618
EaeI YGGCCR 3 cut(s) 288, 387, 528
EagI CGGCCG 1 cut(s) 387
EciI GGCGGA 1 cut(s) 350
EclXI CGGCCG 1 cut(s) 387
Eco130I CCWWGG 2 cut(s) 931, 963
Eco31I GGTCTC 1 cut(s) 598
Eco47III AGCGCT 1 cut(s) 573
Eco52I CGGCCG 1 cut(s) 387
Eco57I CTGAAG 1 cut(s) 251
Eco88I CYCGRG 1 cut(s) 242
Eco91I GGTNACC 1 cut(s) 202
EcoO109I RGGNCCY 1 cut(s) 412
EcoO65I GGTNACC 1 cut(s) 202
EcoRII CCWGG 2 cut(s) 154, 915
EcoT14I CCWWGG 2 cut(s) 931, 963
EcoT22I ATGCAT 1 cut(s) 108
EgeI GGCGCC 1 cut(s) 646
EheI GGCGCC 1 cut(s) 646
ErhI CCWWGG 2 cut(s) 931, 963
Esp3I CGTCTC 1 cut(s) 280
FaeI CATG 4 cut(s) 106, 529, 926, 967
FaiI YATR 4 cut(s) 104, 527, 924, 965
FatI CATG 4 cut(s) 102, 525, 922, 963
FblI GTMKAC 5 cut(s) 69, 216, 267, 612, 845
FokI GGATG 2 cut(s) 129, 452
FspBI CTAG 1 cut(s) 575
FspI TGCGCA 1 cut(s) 479
GlaI GCGC 7 cut(s) 121, 479, 573, 624, 646, 921, 981
HaeII RGCGCY 2 cut(s) 575, 648
HaeIII GGCC 7 cut(s) 47, 75, 290, 389, 413, 518, 530
HgaI GACGC 3 cut(s) 62, 227, 831
HhaI GCGC 7 cut(s) 122, 480, 574, 625, 647, 922, 982
Hin1I GRCGYC 5 cut(s) 54, 219, 645, 842, 848
Hin1II CATG 4 cut(s) 106, 529, 926, 967
Hin6I GCGC 7 cut(s) 120, 478, 572, 623, 645, 920, 980
HinP1I GCGC 7 cut(s) 120, 478, 572, 623, 645, 920, 980
HincII GTYRAC 4 cut(s) 70, 268, 613, 846
HindII GTYRAC 4 cut(s) 70, 268, 613, 846
HphI GGTGA 4 cut(s) 214, 320, 722, 817
Hpy166II GTNNAC 7 cut(s) 70, 217, 268, 613, 808, 846, 877
Hpy188I TCNGA 4 cut(s) 231, 349, 361, 592
Hpy188III TCNNGA 4 cut(s) 469, 490, 601, 908
Hpy8I GTNNAC 7 cut(s) 70, 217, 268, 613, 808, 846, 877
Hpy99I CGWCG 8 cut(s) 56, 74, 617, 644, 847, 850, 853, 1001
HpyCH4III ACNGT 5 cut(s) 85, 202, 514, 547, 1013
HpyCH4IV ACGT 3 cut(s) 615, 848, 873
HpyCH4V TGCA 3 cut(s) 106, 451, 465
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 117, 233, 462, 744, 779, 919, 967
HpyF3I CTNAG 2 cut(s) 282, 906
HpySE526I ACGT 3 cut(s) 615, 848, 873
Hsp92I GRCGYC 5 cut(s) 54, 219, 645, 842, 848
Hsp92II CATG 4 cut(s) 106, 529, 926, 967
HspAI GCGC 7 cut(s) 120, 478, 572, 623, 645, 920, 980
KasI GGCGCC 1 cut(s) 644
KroI GCCGGC 4 cut(s) 286, 385, 625, 782
KroNI GCCGGC 4 cut(s) 288, 387, 627, 784
Kzo9I GATC 5 cut(s) 391, 429, 441, 535, 618
LmnI GCTCC 4 cut(s) 185, 650, 910, 967
Lsp1109I GCAGC 6 cut(s) 664, 686, 712, 760, 763, 766
LweI GCATC 4 cut(s) 107, 169, 465, 474
MaeI CTAG 1 cut(s) 575
MaeII ACGT 3 cut(s) 615, 848, 873
MaeIII GTNAC 3 cut(s) 202, 541, 710
MalI GATC 5 cut(s) 393, 431, 443, 537, 620
MbiI CCGCTC 1 cut(s) 227
MboI GATC 5 cut(s) 391, 429, 441, 535, 618
MflI RGATCY 2 cut(s) 441, 535
MhlI GDGCHC 4 cut(s) 428, 557, 915, 972
MlsI TGGCCA 1 cut(s) 530
MluNI TGGCCA 1 cut(s) 530
Mly113I GGCGCC 1 cut(s) 645
MmeI TCCRAC 1 cut(s) 570
Mox20I TGGCCA 1 cut(s) 530
Mph1103I ATGCAT 1 cut(s) 108
MreI CGCCGGCG 1 cut(s) 625
MroNI GCCGGC 4 cut(s) 286, 385, 625, 782
MscI TGGCCA 1 cut(s) 530
MseI TTAA 1 cut(s) 93
MslI CAYNNNNRTG 1 cut(s) 548
Msp20I TGGCCA 1 cut(s) 530
MspA1I CMGCKG 1 cut(s) 677
MspR9I CCNGG 5 cut(s) 156, 208, 732, 867, 917
MvaI CCWGG 2 cut(s) 156, 917
MvnI CGCG 2 cut(s) 623, 839
MwoI GCNNNNNNNGC 8 cut(s) 53, 117, 233, 462, 744, 779, 919, 967
NaeI GCCGGC 4 cut(s) 288, 387, 627, 784
NarI GGCGCC 1 cut(s) 645
NciI CCSGG 3 cut(s) 208, 732, 867
NcoI CCATGG 1 cut(s) 963
NdeII GATC 5 cut(s) 391, 429, 441, 535, 618
NgoMIV GCCGGC 4 cut(s) 286, 385, 625, 782
NlaIII CATG 4 cut(s) 106, 529, 926, 967
NlaIV GGNNCC 5 cut(s) 187, 414, 646, 652, 944
NmeAIII GCCGAG 1 cut(s) 397
NmuCI GTSAC 3 cut(s) 202, 541, 710
NsbI TGCGCA 1 cut(s) 479
NsiI ATGCAT 1 cut(s) 108
NspI RCATGY 2 cut(s) 106, 926
OliI CACNNNNGTG 1 cut(s) 548
PaeR7I CTCGAG 1 cut(s) 242
PdiI GCCGGC 4 cut(s) 288, 387, 627, 784
PflFI GACNNNGTC 1 cut(s) 272
PinAI ACCGGT 1 cut(s) 607
Ple19I CGATCG 1 cut(s) 432
PluTI GGCGCC 1 cut(s) 648
Psp6I CCWGG 2 cut(s) 154, 915
PspEI GGTNACC 1 cut(s) 202
PspGI CCWGG 2 cut(s) 154, 915
PspN4I GGNNCC 5 cut(s) 187, 414, 646, 652, 944
PspPI GGNCC 2 cut(s) 74, 412
PspXI VCTCGAGB 1 cut(s) 242
PsrI GAACNNNNNNTAC 2 cut(s) 935, 967
PsuI RGATCY 2 cut(s) 441, 535
PsyI GACNNNGTC 1 cut(s) 272
PvuI CGATCG 1 cut(s) 432
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 4 cut(s) 511, 854, 860, 938
RsaNI GTAC 4 cut(s) 510, 853, 859, 937
RseI CAYNNNNRTG 1 cut(s) 548
SalI GTCGAC 4 cut(s) 68, 266, 611, 844
SaqAI TTAA 1 cut(s) 93
Sau3AI GATC 5 cut(s) 391, 429, 441, 535, 618
Sau96I GGNCC 2 cut(s) 74, 412
ScrFI CCNGG 5 cut(s) 156, 208, 732, 867, 917
SduI GDGCHC 4 cut(s) 428, 557, 915, 972
SfaNI GCATC 4 cut(s) 107, 169, 465, 474
SfoI GGCGCC 1 cut(s) 646
Sfr274I CTCGAG 1 cut(s) 242
SgrAI CRCCGGYG 1 cut(s) 625
SgrDI CGTCGACG 1 cut(s) 844
SlaI CTCGAG 1 cut(s) 242
SmiMI CAYNNNNRTG 1 cut(s) 548
SmlI CTYRAG 1 cut(s) 242
SmoI CTYRAG 1 cut(s) 242
SspDI GGCGCC 1 cut(s) 644
SspMI CTAG 1 cut(s) 575
StyD4I CCNGG 5 cut(s) 154, 206, 730, 865, 915
StyI CCWWGG 2 cut(s) 931, 963
TaaI ACNGT 5 cut(s) 85, 202, 514, 547, 1013
TaiI ACGT 3 cut(s) 618, 851, 876
TaqI TCGA 6 cut(s) 69, 243, 267, 522, 612, 845
TaqII GACCGA 1 cut(s) 113
TauI GCSGC 7 cut(s) 50, 224, 227, 690, 789, 842, 985
Tru1I TTAA 1 cut(s) 93
Tru9I TTAA 1 cut(s) 93
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 3 cut(s) 202, 541, 710
TseI GCWGC 6 cut(s) 674, 677, 725, 773, 776, 779
Tsp45I GTSAC 3 cut(s) 202, 541, 710
TspGWI ACGGA 1 cut(s) 717
TspRI CASTG 1 cut(s) 88
Tth111I GACNNNGTC 1 cut(s) 272
XceI RCATGY 2 cut(s) 106, 926
XhoI CTCGAG 1 cut(s) 242
XmiI GTMKAC 5 cut(s) 69, 216, 267, 612, 845
XspI CTAG 1 cut(s) 575
ZraI GACGTC 1 cut(s) 849
Zsp2I ATGCAT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.