Rmu_sc0021381.1_g000001
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021381.1
OG0004524
Physical Location & Seq
Reverse (-)
1 .. 473
473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021381.1_g000001.1.cds

Sequence Viewer

Length: 354 bp
atggttttgcgagtgcttctcctggttttgcttgtattcaactctcttgcatttgtaagctgtgtaaatgaggaaggtttagcactactttcgttcaaaggatccttaactgagtatgccgaaggctctatgaataactggaactcttcagaccaaagcccatgttcatgggatggaatcgcatgcaaacaagagaaagttgtatctctcagtcttccaaacaaaaatctttccgggactttcccttctgctcttgggaacctctctgccctccgccgtctgaatctcaggaacaacaggcttttgggaagactgccattagatttgttccatgcaaaggagctccagagtgtg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

118

Amino Acids

12.96

Weight (kDa)

8.57

Isoelectric Point (pI)

56.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 274
AclWI GGATC 2 cut(s) 96, 109
AcuI CTGAAG 1 cut(s) 132
AfiI CCNNNNNNNGG 1 cut(s) 337
AgsI TTSAA 2 cut(s) 40, 97
AjnI CCWGG 1 cut(s) 21
AluBI AGCT 2 cut(s) 60, 343
AluI AGCT 2 cut(s) 60, 343
Alw21I GWGCWC 1 cut(s) 345
AlwI GGATC 2 cut(s) 96, 109
AsuC2I CCSGG 1 cut(s) 235
BamHI GGATCC 1 cut(s) 101
BanII GRGCYC 1 cut(s) 345
BbsI GAAGAC 2 cut(s) 206, 316
Bbv12I GWGCWC 1 cut(s) 345
BccI CCATC 1 cut(s) 167
BceAI ACGGC 1 cut(s) 261
BcgI CGANNNNNNTGC 2 cut(s) 72, 106
BciT130I CCWGG 1 cut(s) 23
BcnI CCSGG 1 cut(s) 235
Bme1390I CCNGG 2 cut(s) 23, 235
BmiI GGNNCC 2 cut(s) 103, 260
BmrFI CCNGG 2 cut(s) 23, 235
BpiI GAAGAC 2 cut(s) 206, 316
BplI GAGNNNNNCTC 1 cut(s) 35
BpmI CTGGAG 1 cut(s) 329
BpuMI CCSGG 1 cut(s) 235
Bsc4I CCNNNNNNNGG 1 cut(s) 337
Bse1I ACTGG 1 cut(s) 143
BseBI CCWGG 1 cut(s) 23
BseGI GGATG 1 cut(s) 178
BseLI CCNNNNNNNGG 1 cut(s) 337
BseMII CTCAG 3 cut(s) 102, 223, 301
BseNI ACTGG 1 cut(s) 143
BsiHKAI GWGCWC 1 cut(s) 345
BsiSI CCGG 1 cut(s) 234
BslFI GGGAC 1 cut(s) 250
BslI CCNNNNNNNGG 1 cut(s) 337
BsmFI GGGAC 1 cut(s) 250
Bsp1286I GDGCHC 1 cut(s) 345
Bsp143I GATC 1 cut(s) 101
BspACI CCGC 1 cut(s) 274
BspCNI CTCAG 3 cut(s) 103, 222, 300
BspLI GGNNCC 2 cut(s) 103, 260
BspPI GGATC 2 cut(s) 96, 109
BsrI ACTGG 1 cut(s) 143
BssMI GATC 1 cut(s) 101
Bst2UI CCWGG 1 cut(s) 23
Bst6I CTCTTC 1 cut(s) 151
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 3 cut(s) 111, 209, 287
BstF5I GGATG 1 cut(s) 178
BstKTI GATC 1 cut(s) 104
BstMBI GATC 1 cut(s) 101
BstNI CCWGG 1 cut(s) 23
BstNSI RCATGY 1 cut(s) 186
BstSCI CCNGG 2 cut(s) 21, 233
BstV2I GAAGAC 2 cut(s) 206, 316
BstX2I RGATCY 1 cut(s) 101
BstXI CCANNNNNNTGG 1 cut(s) 168
BstYI RGATCY 1 cut(s) 101
BtsCI GGATG 1 cut(s) 178
Cac8I GCNNGC 1 cut(s) 184
CviAII CATG 4 cut(s) 162, 168, 183, 332
CviJI RGCY 5 cut(s) 60, 126, 159, 301, 343
CviKI_1 RGCY 5 cut(s) 60, 126, 159, 301, 343
DdeI CTNAG 3 cut(s) 111, 209, 287
DpnI GATC 1 cut(s) 103
DpnII GATC 1 cut(s) 101
Eam1104I CTCTTC 1 cut(s) 151
EarI CTCTTC 1 cut(s) 151
EciI GGCGGA 1 cut(s) 263
Ecl136II GAGCTC 1 cut(s) 343
Eco24I GRGCYC 1 cut(s) 345
Eco53kI GAGCTC 1 cut(s) 343
Eco57I CTGAAG 1 cut(s) 132
EcoICRI GAGCTC 1 cut(s) 343
EcoRII CCWGG 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 345
FaeI CATG 4 cut(s) 165, 171, 186, 335
FaiI YATR 6 cut(s) 117, 131, 163, 169, 184, 333
FaqI GGGAC 1 cut(s) 250
FatI CATG 4 cut(s) 161, 167, 182, 331
FokI GGATG 1 cut(s) 185
FriOI GRGCYC 1 cut(s) 345
GsuI CTGGAG 1 cut(s) 329
HapII CCGG 1 cut(s) 234
Hin1II CATG 4 cut(s) 165, 171, 186, 335
HinfI GANTC 2 cut(s) 177, 283
HpaII CCGG 1 cut(s) 234
Hpy188I TCNGA 2 cut(s) 151, 282
Hpy188III TCNNGA 2 cut(s) 289, 346
HpyAV CCTTC 3 cut(s) 68, 116, 255
HpyCH4V TGCA 3 cut(s) 50, 186, 335
HpyF3I CTNAG 3 cut(s) 111, 209, 287
Hsp92II CATG 4 cut(s) 165, 171, 186, 335
Kzo9I GATC 1 cut(s) 101
LmnI GCTCC 2 cut(s) 340, 348
LpnPI CCDG 6 cut(s) 8, 35, 124, 247, 274, 283
MalI GATC 1 cut(s) 103
MboI GATC 1 cut(s) 101
MboII GAAGA 3 cut(s) 138, 206, 321
MflI RGATCY 1 cut(s) 101
MhlI GDGCHC 1 cut(s) 345
MnlI CCTC 3 cut(s) 64, 272, 281
MseI TTAA 1 cut(s) 107
MslI CAYNNNNRTG 1 cut(s) 166
MspI CCGG 1 cut(s) 234
MspR9I CCNGG 2 cut(s) 23, 235
MvaI CCWGG 1 cut(s) 23
NciI CCSGG 1 cut(s) 235
NdeII GATC 1 cut(s) 101
NlaIII CATG 4 cut(s) 165, 171, 186, 335
NlaIV GGNNCC 2 cut(s) 103, 260
NspI RCATGY 1 cut(s) 186
PaeI GCATGC 1 cut(s) 186
PfeI GAWTC 2 cut(s) 177, 283
PfoI TCCNGGA 1 cut(s) 233
Psp124BI GAGCTC 1 cut(s) 345
Psp6I CCWGG 1 cut(s) 21
PspGI CCWGG 1 cut(s) 21
PspN4I GGNNCC 2 cut(s) 103, 260
PsuI RGATCY 1 cut(s) 101
RseI CAYNNNNRTG 1 cut(s) 166
SacI GAGCTC 1 cut(s) 345
SaqAI TTAA 1 cut(s) 107
Sau3AI GATC 1 cut(s) 101
ScrFI CCNGG 2 cut(s) 23, 235
SduI GDGCHC 1 cut(s) 345
SetI ASST 4 cut(s) 62, 79, 264, 345
SmiMI CAYNNNNRTG 1 cut(s) 166
SphI GCATGC 1 cut(s) 186
SsiI CCGC 1 cut(s) 274
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 2 cut(s) 21, 233
TfiI GAWTC 2 cut(s) 177, 283
Tru1I TTAA 1 cut(s) 107
Tru9I TTAA 1 cut(s) 107
TspDTI ATGAA 2 cut(s) 146, 156
XceI RCATGY 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.