Rroxscaffold_2G00085250

UDP-glycosyltransferase 83A1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
7600363 .. 7602715
2353 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00085250.1

Sequence Viewer

Length: 219 bp
ATGGATGGAAGGAGGTATTTTACATGGGATAGGATGCTTTTCCCGCACACGGAGGAGTATGCGGTTGGAACGGTTGGCACGGTAGTTTTCAATCAAACCCAATTCCAAGAACTGGCTTTAGCTCTTGAGTTGTCTAATAGGACATTCCTCCGGGTTGTGAGACCAGATACCGGTGATAGCGATAACATTCCCTACCCCGAAGGATATCAAGACGAGTAG
Functional Annotation

Protein Analysis

72

Amino Acids

8.41

Weight (kDa)

4.5

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 112
AciI CCGC 2 cut(s) 44, 62
AfiI CCNNNNNNNGG 3 cut(s) 49, 112, 170
AgeI ACCGGT 1 cut(s) 170
AgsI TTSAA 1 cut(s) 91
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
Alw26I GTCTC 1 cut(s) 154
AsiGI ACCGGT 1 cut(s) 170
AsuC2I CCSGG 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 185
BcnI CCSGG 1 cut(s) 152
BcoDI GTCTC 1 cut(s) 154
Bme1390I CCNGG 1 cut(s) 152
BmrFI CCNGG 1 cut(s) 152
BmsI GCATC 1 cut(s) 24
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 154
BsaWI WCCGGW 1 cut(s) 170
Bsc4I CCNNNNNNNGG 3 cut(s) 49, 112, 170
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 1 cut(s) 117
BseGI GGATG 2 cut(s) 10, 39
BseLI CCNNNNNNNGG 3 cut(s) 49, 112, 170
BseNI ACTGG 1 cut(s) 117
BseRI GAGGAG 1 cut(s) 68
BshTI ACCGGT 1 cut(s) 170
BsiSI CCGG 2 cut(s) 151, 171
BslI CCNNNNNNNGG 3 cut(s) 49, 112, 170
BsmAI GTCTC 1 cut(s) 154
Bso31I GGTCTC 1 cut(s) 154
BspACI CCGC 2 cut(s) 44, 62
BspTNI GGTCTC 1 cut(s) 154
BsrFI RCCGGY 1 cut(s) 170
BsrI ACTGG 1 cut(s) 117
BssAI RCCGGY 1 cut(s) 170
Bst4CI ACNGT 2 cut(s) 73, 82
BstF5I GGATG 2 cut(s) 10, 39
BstMAI GTCTC 1 cut(s) 154
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstSCI CCNGG 1 cut(s) 150
BtsCI GGATG 2 cut(s) 10, 39
Cfr10I RCCGGY 1 cut(s) 170
CspAI ACCGGT 1 cut(s) 170
CviAII CATG 1 cut(s) 24
CviJI RGCY 2 cut(s) 116, 122
CviKI_1 RGCY 2 cut(s) 116, 122
Eco31I GGTCTC 1 cut(s) 154
Eco32I GATATC 1 cut(s) 206
EcoRV GATATC 1 cut(s) 206
FaeI CATG 1 cut(s) 27
FaiI YATR 2 cut(s) 25, 60
FatI CATG 1 cut(s) 23
FauI CCCGC 1 cut(s) 51
FokI GGATG 2 cut(s) 17, 46
HapII CCGG 2 cut(s) 151, 171
Hin1II CATG 1 cut(s) 27
HpaII CCGG 2 cut(s) 151, 171
HphI GGTGA 1 cut(s) 185
Hpy188III TCNNGA 2 cut(s) 125, 209
HpyAV CCTTC 2 cut(s) 3, 194
HpyCH4III ACNGT 2 cut(s) 73, 82
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
Hsp92II CATG 1 cut(s) 27
LpnPI CCDG 4 cut(s) 98, 164, 177, 184
LweI GCATC 1 cut(s) 24
MluCI AATT 1 cut(s) 101
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 3 cut(s) 6, 46, 158
MspI CCGG 2 cut(s) 151, 171
MspR9I CCNGG 1 cut(s) 152
MwoI GCNNNNNNNGC 1 cut(s) 43
NciI CCSGG 1 cut(s) 152
NlaIII CATG 1 cut(s) 27
PflMI CCANNNNNTGG 1 cut(s) 112
PinAI ACCGGT 1 cut(s) 170
ScrFI CCNGG 1 cut(s) 152
SetI ASST 2 cut(s) 17, 124
SfaNI GCATC 1 cut(s) 24
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 1 cut(s) 101
SsiI CCGC 2 cut(s) 44, 62
StyD4I CCNGG 1 cut(s) 150
TaaI ACNGT 2 cut(s) 73, 82
TasI AATT 1 cut(s) 101
TspGWI ACGGA 1 cut(s) 65
Van91I CCANNNNNTGG 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.