Rorug02G0247500
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
25790368 .. 25793870
3503 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0247500.1

Sequence Viewer

Length: 1107 bp
ATGGACCCAGCCGCACCCGAATCCCAATCCCTAACCACCGACCTCCAAACCCTGACCCTCTCCACCGATCCCCTAACCGACAAGTTCGCCTCCCTCAACGACCTCGCCCACGAGCTCGCCTCCCTCCAGGACCTCGCCACCCGCGGCTCCTGGCGCTCCATTCTCGACAAGGTCGCCGTCGCCCGAGCCCAGTCCCTCCTCAACAAGCCCCACGACCACCTCGTCTACTTCACCTACAACGTCCTCGCCTTGACCAAACTGCGTCGTTTCACCGAAGCCGCGTCCGAGATCGATTCCCTAGAAGACCTCAACAGCTCTCGGTACCGTTACGAGGGGTATCCGAATGTGTACCCGAACCGGGTCGGGTCTATGGTGCCGTTCTCGCTGCGGTGGCTTTATGCGTTAATGCCGATCAAGTTGGGCCGGCGGCAGGATGGGCTGGACCGGCTGTACGTGCTCTTGGACTTTGTGAGGAGTAAGGTGAAGGAGAAAGGGGAGATTGGGAGTGTGAATGTGTGGAAGAGGAGGGAGGTGTTTGTGATGAATGGGATAATTGGGGTTCATTTGAATCAGAAGGAGTTGGCTGCTTGCTTCAGCTTGATTAAGGACTTGTTGAACCGGGATTACACGGACCCGGTTCTGGTTTCGAAGCTCGGGTACATTCAGATGCAAATGGGGGACCTAGAGGGAGCGAAGAGCTCGTTCAATGTGGTGCAGGGGTTGGTGGAGAAGGAAGGTGAAGTGGGAAGTGAGTTGAGGAACTTAGTGAGCAGGAACAAGGCGTTGATTTACATGGTGGGGAAGGACTATGTGTCGGCGGTGAGGGAGTATGAGGAGTGCATTGAGAGGGATGGGAGCGATGTCGTGGCGATTAATAACAAGTCTCTTTGCTTGATGTACTTGAGGGACTTGTCGGATTCGATCAAGGTGTTGGAGAATGCGCTGGAGAGAGTGCCTACGGTGGCGTTGAACGAGACGCTTGTGGTGAATTTGTGTAGTATGTATGAGCTGGCTTATGTTAATCATGGGGATGTTAAGAGGACTCTCAGTAGCTGGATTGCCAGGGTTGCTCCTGATGATTTTGATTCGGCTTCTACAAGGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

368

Amino Acids

41.49

Weight (kDa)

5.7

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 221
Acc65I GGTACC 1 cut(s) 321
AccB1I GGYRCC 2 cut(s) 321, 373
AccI GTMKAC 1 cut(s) 225
AccII CGCG 2 cut(s) 144, 281
AciI CCGC 7 cut(s) 12, 142, 144, 279, 388, 427, 818
AclWI GGATC 1 cut(s) 62
AcsI RAATTY 1 cut(s) 988
AcuI CTGAAG 1 cut(s) 577
AfaI GTAC 5 cut(s) 323, 350, 452, 659, 899
AfiI CCNNNNNNNGG 4 cut(s) 331, 358, 430, 640
AgsI TTSAA 4 cut(s) 568, 616, 706, 970
AhdI GACNNNNNGTC 1 cut(s) 811
AjnI CCWGG 3 cut(s) 126, 149, 1061
AluBI AGCT 7 cut(s) 115, 315, 597, 652, 699, 1009, 1053
AluI AGCT 7 cut(s) 115, 315, 597, 652, 699, 1009, 1053
Alw21I GWGCWC 3 cut(s) 117, 459, 701
Alw26I GTCTC 2 cut(s) 888, 968
AlwI GGATC 1 cut(s) 62
AlwNI CAGNNNCTG 1 cut(s) 1053
Ama87I CYCGRG 2 cut(s) 183, 653
AoxI GGCC 1 cut(s) 421
ApeKI GCWGC 2 cut(s) 385, 584
ApoI RAATTY 1 cut(s) 988
AseI ATTAAT 1 cut(s) 873
Asp718I GGTACC 1 cut(s) 321
AspLEI GCGC 2 cut(s) 156, 943
AspS9I GGNCC 6 cut(s) 4, 130, 421, 442, 631, 679
AsuC2I CCSGG 3 cut(s) 359, 620, 635
AsuHPI GGTGA 6 cut(s) 223, 262, 493, 749, 832, 997
AsuII TTCGAA 1 cut(s) 647
AvaI CYCGRG 2 cut(s) 183, 653
AvaII GGWCC 5 cut(s) 4, 130, 442, 631, 679
BanI GGYRCC 2 cut(s) 321, 373
BanII GRGCYC 3 cut(s) 117, 190, 701
BarI GAAGNNNNNNTAC 2 cut(s) 641, 673
BauI CACGAG 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 309
Bbv12I GWGCWC 3 cut(s) 117, 459, 701
BbvI GCAGC 2 cut(s) 372, 571
BccI CCATC 2 cut(s) 428, 845
BceAI ACGGC 2 cut(s) 161, 361
BciT130I CCWGG 3 cut(s) 128, 151, 1063
BciVI GTATCC 1 cut(s) 348
BcnI CCSGG 3 cut(s) 359, 620, 635
BcoDI GTCTC 2 cut(s) 888, 968
BfaI CTAG 2 cut(s) 299, 683
BfoI RGCGCY 1 cut(s) 157
BfuI GTATCC 1 cut(s) 348
BisI GCNGC 6 cut(s) 12, 145, 279, 386, 428, 585
BlsI GCNGC 6 cut(s) 13, 146, 280, 387, 429, 586
Bme1390I CCNGG 6 cut(s) 128, 151, 359, 620, 635, 1063
Bme18I GGWCC 5 cut(s) 4, 130, 442, 631, 679
BmeRI GACNNNNNGTC 1 cut(s) 811
BmeT110I CYCGRG 2 cut(s) 183, 653
BmgT120I GGNCC 6 cut(s) 4, 130, 421, 442, 631, 679
BmiI GGNNCC 6 cut(s) 6, 148, 323, 375, 633, 680
BmrFI CCNGG 6 cut(s) 128, 151, 359, 620, 635, 1063
BmrI ACTGGG 1 cut(s) 184
BmsI GCATC 1 cut(s) 657
BmuI ACTGGG 1 cut(s) 184
BpiI GAAGAC 1 cut(s) 309
BplI GAGNNNNNCTC 2 cut(s) 104, 136
BpmI CTGGAG 2 cut(s) 110, 965
Bpu14I TTCGAA 1 cut(s) 647
BpuEI CTTGAG 1 cut(s) 922
BpuMI CCSGG 3 cut(s) 359, 620, 635
Bsa29I ATCGAT 1 cut(s) 291
BsaAI YACGTR 1 cut(s) 454
BsaJI CCNNGG 2 cut(s) 142, 1062
Bsc4I CCNNNNNNNGG 4 cut(s) 331, 358, 430, 640
Bse118I RCCGGY 2 cut(s) 423, 444
Bse1I ACTGG 1 cut(s) 190
BseBI CCWGG 3 cut(s) 128, 151, 1063
BseCI ATCGAT 1 cut(s) 291
BseDI CCNNGG 2 cut(s) 142, 1062
BseGI GGATG 3 cut(s) 439, 856, 1036
BseLI CCNNNNNNNGG 4 cut(s) 331, 358, 430, 640
BseMII CTCAG 1 cut(s) 1060
BseNI ACTGG 1 cut(s) 190
BseRI GAGGAG 4 cut(s) 188, 487, 538, 848
BseXI GCAGC 2 cut(s) 372, 571
BseYI CCCAGC 1 cut(s) 7
BsgI GTGCAG 1 cut(s) 734
Bsh1236I CGCG 2 cut(s) 144, 281
BshFI GGCC 1 cut(s) 423
BshNI GGYRCC 2 cut(s) 321, 373
BshVI ATCGAT 1 cut(s) 291
BsiHKAI GWGCWC 3 cut(s) 117, 459, 701
BsiHKCI CYCGRG 2 cut(s) 183, 653
BsiSI CCGG 5 cut(s) 358, 424, 445, 619, 635
BslFI GGGAC 3 cut(s) 178, 692, 920
BslI CCNNNNNNNGG 4 cut(s) 331, 358, 430, 640
BsmAI GTCTC 2 cut(s) 888, 968
BsmBI CGTCTC 1 cut(s) 968
BsmFI GGGAC 3 cut(s) 178, 692, 920
BsmI GAATGC 1 cut(s) 943
BsnI GGCC 1 cut(s) 423
BsoBI CYCGRG 2 cut(s) 183, 653
Bsp119I TTCGAA 1 cut(s) 647
Bsp1286I GDGCHC 4 cut(s) 117, 190, 459, 701
Bsp143I GATC 4 cut(s) 67, 288, 411, 921
BspACI CCGC 7 cut(s) 12, 142, 144, 279, 388, 427, 818
BspANI GGCC 1 cut(s) 423
BspCNI CTCAG 1 cut(s) 1059
BspDI ATCGAT 1 cut(s) 291
BspFNI CGCG 2 cut(s) 144, 281
BspLI GGNNCC 6 cut(s) 6, 148, 323, 375, 633, 680
BspPI GGATC 1 cut(s) 62
BspQI GCTCTTC 1 cut(s) 689
BspT104I TTCGAA 1 cut(s) 647
BspT107I GGYRCC 2 cut(s) 321, 373
BsrFI RCCGGY 2 cut(s) 423, 444
BsrI ACTGG 1 cut(s) 190
BssAI RCCGGY 2 cut(s) 423, 444
BssECI CCNNGG 2 cut(s) 142, 1062
BssMI GATC 4 cut(s) 67, 288, 411, 921
BssSI CACGAG 1 cut(s) 110
Bst2BI CACGAG 1 cut(s) 110
Bst2UI CCWGG 3 cut(s) 128, 151, 1063
Bst4CI ACNGT 2 cut(s) 326, 961
Bst6I CTCTTC 2 cut(s) 515, 689
BstBAI YACGTR 1 cut(s) 454
BstBI TTCGAA 1 cut(s) 647
BstC8I GCNNGC 4 cut(s) 117, 425, 589, 1011
BstDEI CTNAG 2 cut(s) 763, 1046
BstDSI CCRYGG 1 cut(s) 142
BstF5I GGATG 3 cut(s) 439, 856, 1036
BstFNI CGCG 2 cut(s) 144, 281
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 2 cut(s) 156, 943
BstKTI GATC 4 cut(s) 70, 291, 414, 924
BstMAI GTCTC 2 cut(s) 888, 968
BstMBI GATC 4 cut(s) 67, 288, 411, 921
BstMWI GCNNNNNNNGC 7 cut(s) 153, 382, 391, 436, 445, 454, 1067
BstNI CCWGG 3 cut(s) 128, 151, 1063
BstSCI CCNGG 6 cut(s) 126, 149, 357, 618, 633, 1061
BstUI CGCG 2 cut(s) 144, 281
BstV1I GCAGC 2 cut(s) 372, 571
BstV2I GAAGAC 1 cut(s) 309
Bsu15I ATCGAT 1 cut(s) 291
BsuI GTATCC 1 cut(s) 348
BsuRI GGCC 1 cut(s) 423
BsuTUI ATCGAT 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 142
BtgZI GCGATG 1 cut(s) 873
BtsCI GGATG 3 cut(s) 439, 856, 1036
Cac8I GCNNGC 4 cut(s) 117, 425, 589, 1011
CaiI CAGNNNCTG 1 cut(s) 1053
CfoI GCGC 2 cut(s) 156, 943
Cfr10I RCCGGY 2 cut(s) 423, 444
Cfr13I GGNCC 6 cut(s) 4, 130, 421, 442, 631, 679
Cfr42I CCGCGG 1 cut(s) 145
ClaI ATCGAT 1 cut(s) 291
CseI GACGC 3 cut(s) 251, 270, 985
Csp6I GTAC 5 cut(s) 322, 349, 451, 658, 898
CviAII CATG 2 cut(s) 793, 1025
CviQI GTAC 5 cut(s) 322, 349, 451, 658, 898
DdeI CTNAG 2 cut(s) 763, 1046
DpnI GATC 4 cut(s) 69, 290, 413, 923
DpnII GATC 4 cut(s) 67, 288, 411, 921
DrdI GACNNNNNNGTC 1 cut(s) 221
DriI GACNNNNNGTC 1 cut(s) 811
DseDI GACNNNNNNGTC 1 cut(s) 221
Eam1104I CTCTTC 2 cut(s) 515, 689
Eam1105I GACNNNNNGTC 1 cut(s) 811
EarI CTCTTC 2 cut(s) 515, 689
Ecl136II GAGCTC 2 cut(s) 115, 699
Eco24I GRGCYC 3 cut(s) 117, 190, 701
Eco47I GGWCC 5 cut(s) 4, 130, 442, 631, 679
Eco53kI GAGCTC 2 cut(s) 115, 699
Eco57I CTGAAG 1 cut(s) 577
Eco88I CYCGRG 2 cut(s) 183, 653
EcoICRI GAGCTC 2 cut(s) 115, 699
EcoO109I RGGNCCY 2 cut(s) 130, 679
EcoRII CCWGG 3 cut(s) 126, 149, 1061
EcoT38I GRGCYC 3 cut(s) 117, 190, 701
Esp3I CGTCTC 1 cut(s) 968
FaeI CATG 2 cut(s) 796, 1028
FaiI YATR 9 cut(s) 371, 399, 794, 810, 831, 1001, 1005, 1017, 1026
FaqI GGGAC 3 cut(s) 178, 692, 920
FatI CATG 2 cut(s) 792, 1024
FauI CCCGC 1 cut(s) 149
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 6 cut(s) 12, 145, 279, 386, 428, 585
FokI GGATG 3 cut(s) 446, 863, 1043
FriOI GRGCYC 3 cut(s) 117, 190, 701
Fsp4HI GCNGC 6 cut(s) 12, 145, 279, 386, 428, 585
FspBI CTAG 2 cut(s) 299, 683
GlaI GCGC 2 cut(s) 155, 942
GluI GCNGC 6 cut(s) 12, 145, 279, 386, 428, 585
GsaI CCCAGC 1 cut(s) 11
GsuI CTGGAG 2 cut(s) 110, 965
HaeII RGCGCY 1 cut(s) 157
HaeIII GGCC 1 cut(s) 423
HapII CCGG 5 cut(s) 358, 424, 445, 619, 635
HgaI GACGC 3 cut(s) 251, 270, 985
HhaI GCGC 2 cut(s) 156, 943
Hin1II CATG 2 cut(s) 796, 1028
Hin6I GCGC 2 cut(s) 154, 941
HinP1I GCGC 2 cut(s) 154, 941
HinfI GANTC 6 cut(s) 20, 293, 568, 917, 1042, 1085
HpaII CCGG 5 cut(s) 358, 424, 445, 619, 635
HphI GGTGA 6 cut(s) 223, 262, 493, 749, 832, 997
Hpy166II GTNNAC 2 cut(s) 226, 349
Hpy188I TCNGA 5 cut(s) 286, 342, 573, 666, 916
Hpy188III TCNNGA 2 cut(s) 164, 1073
Hpy8I GTNNAC 2 cut(s) 226, 349
Hpy99I CGWCG 2 cut(s) 182, 267
HpyAV CCTTC 5 cut(s) 478, 568, 724, 728, 796
HpyCH4III ACNGT 2 cut(s) 326, 961
HpyCH4IV ACGT 2 cut(s) 240, 453
HpyCH4V TGCA 3 cut(s) 670, 715, 840
HpyF10VI GCNNNNNNNGC 7 cut(s) 153, 382, 391, 436, 445, 454, 1067
HpyF3I CTNAG 2 cut(s) 763, 1046
HpySE526I ACGT 2 cut(s) 240, 453
Hsp92II CATG 2 cut(s) 796, 1028
HspAI GCGC 2 cut(s) 154, 941
KpnI GGTACC 1 cut(s) 325
KroI GCCGGC 1 cut(s) 423
KroNI GCCGGC 1 cut(s) 425
KspI CCGCGG 1 cut(s) 145
Kzo9I GATC 4 cut(s) 67, 288, 411, 921
LguI GCTCTTC 1 cut(s) 689
LmnI GCTCC 5 cut(s) 152, 161, 689, 855, 1075
Lsp1109I GCAGC 2 cut(s) 372, 571
LweI GCATC 1 cut(s) 657
MaeI CTAG 2 cut(s) 299, 683
MaeII ACGT 2 cut(s) 240, 453
MaeIII GTNAC 1 cut(s) 326
MalI GATC 4 cut(s) 69, 290, 413, 923
MboI GATC 4 cut(s) 67, 288, 411, 921
MboII GAAGA 3 cut(s) 314, 532, 706
MhlI GDGCHC 4 cut(s) 117, 190, 459, 701
MluCI AATT 2 cut(s) 552, 988
MlyI GAGTC 1 cut(s) 1036
MmeI TCCRAC 2 cut(s) 894, 912
MroNI GCCGGC 1 cut(s) 423
MseI TTAA 5 cut(s) 404, 603, 873, 1020, 1035
MslI CAYNNNNRTG 2 cut(s) 665, 1029
MspA1I CMGCKG 1 cut(s) 144
MspI CCGG 5 cut(s) 358, 424, 445, 619, 635
MspR9I CCNGG 6 cut(s) 128, 151, 359, 620, 635, 1063
Mva1269I GAATGC 1 cut(s) 943
MvaI CCWGG 3 cut(s) 128, 151, 1063
MvnI CGCG 2 cut(s) 144, 281
MwoI GCNNNNNNNGC 7 cut(s) 153, 382, 391, 436, 445, 454, 1067
NaeI GCCGGC 1 cut(s) 425
NciI CCSGG 3 cut(s) 359, 620, 635
NdeII GATC 4 cut(s) 67, 288, 411, 921
NgoMIV GCCGGC 1 cut(s) 423
NlaIII CATG 2 cut(s) 796, 1028
NlaIV GGNNCC 6 cut(s) 6, 148, 323, 375, 633, 680
NspV TTCGAA 1 cut(s) 647
PciSI GCTCTTC 1 cut(s) 689
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 943
PdiI GCCGGC 1 cut(s) 425
PfeI GAWTC 5 cut(s) 20, 293, 568, 917, 1085
PflFI GACNNNGTC 1 cut(s) 170
PfoI TCCNGGA 1 cut(s) 126
PkrI GCNGC 6 cut(s) 13, 146, 280, 387, 429, 586
PleI GAGTC 1 cut(s) 1036
PpsI GAGTC 1 cut(s) 1036
Ppu21I YACGTR 1 cut(s) 454
PpuMI RGGWCCY 2 cut(s) 130, 679
PshBI ATTAAT 1 cut(s) 873
Psp124BI GAGCTC 2 cut(s) 117, 701
Psp5II RGGWCCY 2 cut(s) 130, 679
Psp6I CCWGG 3 cut(s) 126, 149, 1061
PspFI CCCAGC 1 cut(s) 7
PspGI CCWGG 3 cut(s) 126, 149, 1061
PspN4I GGNNCC 6 cut(s) 6, 148, 323, 375, 633, 680
PspPI GGNCC 6 cut(s) 4, 130, 421, 442, 631, 679
PspPPI RGGWCCY 2 cut(s) 130, 679
PsrI GAACNNNNNNTAC 2 cut(s) 608, 640
PstNI CAGNNNCTG 1 cut(s) 1053
PsyI GACNNNGTC 1 cut(s) 170
RsaI GTAC 5 cut(s) 323, 350, 452, 659, 899
RsaNI GTAC 5 cut(s) 322, 349, 451, 658, 898
RseI CAYNNNNRTG 2 cut(s) 665, 1029
SacI GAGCTC 2 cut(s) 117, 701
SacII CCGCGG 1 cut(s) 145
SapI GCTCTTC 1 cut(s) 689
SaqAI TTAA 5 cut(s) 404, 603, 873, 1020, 1035
SatI GCNGC 6 cut(s) 12, 145, 279, 386, 428, 585
Sau3AI GATC 4 cut(s) 67, 288, 411, 921
Sau96I GGNCC 6 cut(s) 4, 130, 421, 442, 631, 679
SchI GAGTC 1 cut(s) 1036
ScrFI CCNGG 6 cut(s) 128, 151, 359, 620, 635, 1063
SduI GDGCHC 4 cut(s) 117, 190, 459, 701
SfaNI GCATC 1 cut(s) 657
Sfr303I CCGCGG 1 cut(s) 145
SfuI TTCGAA 1 cut(s) 647
SgrBI CCGCGG 1 cut(s) 145
SinI GGWCC 5 cut(s) 4, 130, 442, 631, 679
SmiMI CAYNNNNRTG 2 cut(s) 665, 1029
SmlI CTYRAG 1 cut(s) 901
SmoI CTYRAG 1 cut(s) 901
Sse9I AATT 2 cut(s) 552, 988
SsiI CCGC 7 cut(s) 12, 142, 144, 279, 388, 427, 818
SspMI CTAG 2 cut(s) 299, 683
SstI GAGCTC 2 cut(s) 117, 701
StyD4I CCNGG 6 cut(s) 126, 149, 357, 618, 633, 1061
TaaI ACNGT 2 cut(s) 326, 961
TaiI ACGT 2 cut(s) 243, 456
TaqI TCGA 4 cut(s) 165, 291, 647, 920
TasI AATT 2 cut(s) 552, 988
TatI WGTACW 1 cut(s) 897
TauI GCSGC 4 cut(s) 14, 147, 281, 430
TfiI GAWTC 5 cut(s) 20, 293, 568, 917, 1085
Tru1I TTAA 5 cut(s) 404, 603, 873, 1020, 1035
Tru9I TTAA 5 cut(s) 404, 603, 873, 1020, 1035
TseI GCWGC 2 cut(s) 385, 584
TspDTI ATGAA 2 cut(s) 551, 557
TspGWI ACGGA 1 cut(s) 644
Tth111I GACNNNGTC 1 cut(s) 170
VpaK11BI GGWCC 5 cut(s) 4, 130, 442, 631, 679
VspI ATTAAT 1 cut(s) 873
XapI RAATTY 1 cut(s) 988
XmiI GTMKAC 1 cut(s) 225
XspI CTAG 2 cut(s) 299, 683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.