Rmu_sc0026212.1_g000002

Belongs to the cytochrome b5 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026212.1
Physical Location & Seq
Forward (+)
4326 .. 5690
1365 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0026212.1_g000002.1.cds

Sequence Viewer

Length: 407 bp
atggtgatggaggagataacagtgtacatggggctatcaccggcgatgtttttcacaatcgctaggatggtggtcgtcgtttacagatatgttaccacaatgtttatggctctcgaagattacaacaatcctctggtggtgagtagtgctaattcagaattggtgaacaagtatttcaatcccaagattgccatgacgccaagctcaatccaagtcgaggatatgacggagcaagagcttagaggatatgatgggtctgaccccaataagccccttcttatggtcatcaaagctcatatctacgacgtgtttatacgctctgtttacattttggggcacaaccaaagaaccttactggaaaagatgtcatcgaaagctagagacttcgtcggaggagcaaagctaaa

Protein Analysis

135

Amino Acids

15.37

Weight (kDa)

6.09

Isoelectric Point (pI)

49.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcyI GRCGYC 1 cut(s) 197
AfaI GTAC 1 cut(s) 26
AfiI CCNNNNNNNGG 2 cut(s) 217, 280
AflIII ACRYGT 1 cut(s) 306
AgsI TTSAA 1 cut(s) 178
AjiI CACGTC 1 cut(s) 307
AluBI AGCT 5 cut(s) 204, 238, 293, 377, 403
AluI AGCT 5 cut(s) 204, 238, 293, 377, 403
Alw26I GTCTC 1 cut(s) 375
AsuHPI GGTGA 4 cut(s) 16, 30, 151, 175
BaeGI GKGCMC 1 cut(s) 339
BccI CCATC 2 cut(s) 61, 245
BcoDI GTCTC 1 cut(s) 375
BfaI CTAG 2 cut(s) 63, 378
BmgBI CACGTC 1 cut(s) 307
BsaHI GRCGYC 1 cut(s) 197
Bsc4I CCNNNNNNNGG 2 cut(s) 217, 280
Bse118I RCCGGY 1 cut(s) 40
Bse1I ACTGG 1 cut(s) 360
BseGI GGATG 1 cut(s) 72
BseLI CCNNNNNNNGG 2 cut(s) 217, 280
BseNI ACTGG 1 cut(s) 360
BseRI GAGGAG 1 cut(s) 26
BseSI GKGCMC 1 cut(s) 339
BsiSI CCGG 1 cut(s) 41
BslI CCNNNNNNNGG 2 cut(s) 217, 280
BsmAI GTCTC 1 cut(s) 375
Bsp1286I GDGCHC 1 cut(s) 339
Bsp1407I TGTACA 1 cut(s) 24
BsrFI RCCGGY 1 cut(s) 40
BsrGI TGTACA 1 cut(s) 24
BsrI ACTGG 1 cut(s) 360
BssAI RCCGGY 1 cut(s) 40
BssNI GRCGYC 1 cut(s) 197
Bst4CI ACNGT 1 cut(s) 22
BstACI GRCGYC 1 cut(s) 197
BstAUI TGTACA 1 cut(s) 24
BstDEI CTNAG 1 cut(s) 239
BstF5I GGATG 1 cut(s) 72
BstMAI GTCTC 1 cut(s) 375
BstSLI GKGCMC 1 cut(s) 339
BtgZI GCGATG 1 cut(s) 59
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 1 cut(s) 72
BtsIMutI CAGTG 1 cut(s) 27
Cfr10I RCCGGY 1 cut(s) 40
CseI GACGC 1 cut(s) 205
Csp6I GTAC 1 cut(s) 25
CviAII CATG 2 cut(s) 28, 193
CviJI RGCY 8 cut(s) 34, 110, 204, 238, 271, 293, 377, 403
CviKI_1 RGCY 8 cut(s) 34, 110, 204, 238, 271, 293, 377, 403
CviQI GTAC 1 cut(s) 25
DdeI CTNAG 1 cut(s) 239
FaeI CATG 2 cut(s) 31, 196
FaiI YATR 9 cut(s) 29, 90, 107, 194, 224, 249, 281, 297, 314
FatI CATG 2 cut(s) 27, 192
FokI GGATG 1 cut(s) 79
FspBI CTAG 2 cut(s) 63, 378
HapII CCGG 1 cut(s) 41
HgaI GACGC 1 cut(s) 205
Hin1I GRCGYC 1 cut(s) 197
Hin1II CATG 2 cut(s) 31, 196
HpaII CCGG 1 cut(s) 41
HphI GGTGA 4 cut(s) 16, 30, 151, 175
Hpy166II GTNNAC 4 cut(s) 25, 82, 166, 325
Hpy188I TCNGA 3 cut(s) 157, 259, 392
Hpy188III TCNNGA 1 cut(s) 113
Hpy8I GTNNAC 4 cut(s) 25, 82, 166, 325
Hpy99I CGWCG 3 cut(s) 80, 308, 392
HpyAV CCTTC 1 cut(s) 284
HpyCH4III ACNGT 1 cut(s) 22
HpyCH4IV ACGT 1 cut(s) 306
HpyF3I CTNAG 1 cut(s) 239
HpySE526I ACGT 1 cut(s) 306
Hsp92I GRCGYC 1 cut(s) 197
Hsp92II CATG 2 cut(s) 31, 196
LmnI GCTCC 2 cut(s) 229, 395
LpnPI CCDG 3 cut(s) 54, 119, 341
MaeI CTAG 2 cut(s) 63, 378
MaeII ACGT 1 cut(s) 306
MaeIII GTNAC 1 cut(s) 91
MboII GAAGA 1 cut(s) 128
MhlI GDGCHC 1 cut(s) 339
MluCI AATT 2 cut(s) 151, 158
MmeI TCCRAC 1 cut(s) 370
MnlI CCTC 5 cut(s) 4, 141, 211, 236, 386
MspI CCGG 1 cut(s) 41
NlaIII CATG 2 cut(s) 31, 196
PflFI GACNNNGTC 1 cut(s) 386
PsyI GACNNNGTC 1 cut(s) 386
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
SduI GDGCHC 1 cut(s) 339
SetI ASST 7 cut(s) 206, 240, 295, 309, 353, 379, 405
SgrAI CRCCGGYG 1 cut(s) 40
Sse9I AATT 2 cut(s) 151, 158
SspMI CTAG 2 cut(s) 63, 378
TaaI ACNGT 1 cut(s) 22
TaiI ACGT 1 cut(s) 309
TaqI TCGA 3 cut(s) 114, 216, 371
TasI AATT 2 cut(s) 151, 158
TatI WGTACW 1 cut(s) 24
TscAI CASTG 1 cut(s) 27
TspGWI ACGGA 1 cut(s) 242
TspRI CASTG 1 cut(s) 27
Tth111I GACNNNGTC 1 cut(s) 386
XcmI CCANNNNNNNNNTGG 1 cut(s) 103
XspI CTAG 2 cut(s) 63, 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.