Rh2CG400500

Belongs to the cytochrome b5 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
54447387 .. 54447665
279 bp
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UTR
Exon/CDS
Intron
Rh2CG400500.1

Sequence Viewer

Length: 279 bp
ATGGTGGTCGTCGTTTACAGATATGTTACCACAATGTTTATGGCTCTCGAAGATTACAACAATCCTCCGGTGGTGAGTAGTGTTAATTCAGAATTGGTGAACAAGTATTTCAATCCCAAGATCGCCATGACGCCAAGCTCAATCCAAGTCGAGGATATGACGGAGCAAGAGCTTAGAGGATATGATGGGTCTGACCCCAATAAGCCCCTTCTTATGGCCATCAAAGCTCAGATCTACGACGTGTTTACACGCTCTGTTTACATTTTGGGGCACAACTAA

Protein Analysis

92

Amino Acids

10.5

Weight (kDa)

4.87

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 216
AcyI GRCGYC 1 cut(s) 131
AfiI CCNNNNNNNGG 2 cut(s) 151, 214
AflIII ACRYGT 1 cut(s) 240
AgsI TTSAA 1 cut(s) 112
AjiI CACGTC 1 cut(s) 241
AluBI AGCT 3 cut(s) 138, 172, 227
AluI AGCT 3 cut(s) 138, 172, 227
AoxI GGCC 1 cut(s) 216
AsuHPI GGTGA 2 cut(s) 85, 109
BaeGI GKGCMC 1 cut(s) 273
BalI TGGCCA 1 cut(s) 218
BccI CCATC 2 cut(s) 179, 227
BglII AGATCT 1 cut(s) 231
BmgBI CACGTC 1 cut(s) 241
BsaHI GRCGYC 1 cut(s) 131
BsaWI WCCGGW 1 cut(s) 67
Bsc4I CCNNNNNNNGG 2 cut(s) 151, 214
BseLI CCNNNNNNNGG 2 cut(s) 151, 214
BseMII CTCAG 1 cut(s) 242
BseSI GKGCMC 1 cut(s) 273
BshFI GGCC 1 cut(s) 218
BsiSI CCGG 1 cut(s) 68
BslI CCNNNNNNNGG 2 cut(s) 151, 214
BsnI GGCC 1 cut(s) 218
Bsp1286I GDGCHC 1 cut(s) 273
Bsp143I GATC 2 cut(s) 120, 231
BspANI GGCC 1 cut(s) 218
BspCNI CTCAG 1 cut(s) 241
BssMI GATC 2 cut(s) 120, 231
BssNI GRCGYC 1 cut(s) 131
BstACI GRCGYC 1 cut(s) 131
BstDEI CTNAG 2 cut(s) 173, 228
BstKTI GATC 2 cut(s) 123, 234
BstMBI GATC 2 cut(s) 120, 231
BstMWI GCNNNNNNNGC 1 cut(s) 224
BstSLI GKGCMC 1 cut(s) 273
BstX2I RGATCY 1 cut(s) 231
BstYI RGATCY 1 cut(s) 231
BsuRI GGCC 1 cut(s) 218
BtrI CACGTC 1 cut(s) 241
CseI GACGC 1 cut(s) 139
CviAII CATG 1 cut(s) 127
CviJI RGCY 6 cut(s) 44, 138, 172, 205, 218, 227
CviKI_1 RGCY 6 cut(s) 44, 138, 172, 205, 218, 227
DdeI CTNAG 2 cut(s) 173, 228
DpnI GATC 2 cut(s) 122, 233
DpnII GATC 2 cut(s) 120, 231
EaeI YGGCCR 1 cut(s) 216
FaeI CATG 1 cut(s) 130
FaiI YATR 6 cut(s) 24, 41, 128, 158, 183, 215
FatI CATG 1 cut(s) 126
HaeIII GGCC 1 cut(s) 218
HapII CCGG 1 cut(s) 68
HgaI GACGC 1 cut(s) 139
Hin1I GRCGYC 1 cut(s) 131
Hin1II CATG 1 cut(s) 130
HpaII CCGG 1 cut(s) 68
HphI GGTGA 2 cut(s) 85, 109
Hpy166II GTNNAC 4 cut(s) 16, 100, 246, 259
Hpy188I TCNGA 3 cut(s) 91, 193, 231
Hpy188III TCNNGA 1 cut(s) 47
Hpy8I GTNNAC 4 cut(s) 16, 100, 246, 259
Hpy99I CGWCG 2 cut(s) 14, 242
HpyAV CCTTC 1 cut(s) 218
HpyCH4IV ACGT 1 cut(s) 240
HpyF10VI GCNNNNNNNGC 1 cut(s) 224
HpyF3I CTNAG 2 cut(s) 173, 228
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 1 cut(s) 131
Hsp92II CATG 1 cut(s) 130
Kzo9I GATC 2 cut(s) 120, 231
LmnI GCTCC 1 cut(s) 163
LpnPI CCDG 1 cut(s) 81
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 1 cut(s) 25
MalI GATC 2 cut(s) 122, 233
MboI GATC 2 cut(s) 120, 231
MboII GAAGA 1 cut(s) 62
MflI RGATCY 1 cut(s) 231
MhlI GDGCHC 1 cut(s) 273
MlsI TGGCCA 1 cut(s) 218
MluCI AATT 2 cut(s) 85, 92
MluNI TGGCCA 1 cut(s) 218
MnlI CCTC 3 cut(s) 75, 145, 170
Mox20I TGGCCA 1 cut(s) 218
MscI TGGCCA 1 cut(s) 218
MseI TTAA 1 cut(s) 84
Msp20I TGGCCA 1 cut(s) 218
MspI CCGG 1 cut(s) 68
MwoI GCNNNNNNNGC 1 cut(s) 224
NdeII GATC 2 cut(s) 120, 231
NlaIII CATG 1 cut(s) 130
PsuI RGATCY 1 cut(s) 231
SaqAI TTAA 1 cut(s) 84
Sau3AI GATC 2 cut(s) 120, 231
SduI GDGCHC 1 cut(s) 273
SetI ASST 4 cut(s) 140, 174, 229, 243
Sse9I AATT 2 cut(s) 85, 92
TaiI ACGT 1 cut(s) 243
TaqI TCGA 2 cut(s) 48, 150
TasI AATT 2 cut(s) 85, 92
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TspGWI ACGGA 1 cut(s) 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.