Rmu_sc0041068.1_g000002

tRNA(His) guanylyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0041068.1
Physical Location & Seq
Forward (+)
1551 .. 3119
1569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0041068.1_g000002.1.cds

Sequence Viewer

Length: 1569 bp
atggcaaacagcaaatacgagtacgtcaagtcctacgagtttgaagacgaggttttcctgcccaacttgatcgtcgttcgcatcgacggccgtgattttcgaacgttttctgaagtgcatgagtttgagaaaccaaatgatgaggtagcactcaacttgatgaattcatgtgcagtttcagtgtcggaggagtttccggacatagtgttctcttatgggttcagtgacgagttcagctttgtcttcaagaagacgtccaagttccaccagaggcgtgccagcaaagtagagtccattgttgtatccttcttcacctcggtgtatgtctcgaaatggagggaattcttccctagtaaggagctgagatatcctccttcgtttcgctcacgggttatagcctgcgctacgattgaggttcttcaatcgtatcttctgtggagacagagtagttgtcatacaagcaacctgcacggtacttgcctatgggagcttgtaaaagatgggaagatggaaagcgaagcactggagttactgaagggagccagtaaagaagagaaaaacaaccttctttttgaaaagtttgacatcaactatcaaaaattggatgctatattccgtcaaggatcctgcattttgaaaactgaggtgatggacattgtgaagcacaatgagaatggttctcctgtggagaggcttaggaaaaagttgagaatacttcattcgaagaatatagctgggcgaagtttttggaacgagcatgcgagtcttaggaatgagctcggtatatttacaagggacattggaaaagttgaacccgattatctcaggtccttccagtttgggaacaaattgatgccatcaacgtggattgttattagaatcgatggttgccactttcacaggtttactgaagttcatgagtttgtgaagccgaatgatgagcaagctctcaaccttatgaattcatgtgccgttgctgtggtgaaagaatttccagacattattttctcctatggcgtgagcgatgaatacagctttgttttcaagaagaattctcagttctgtcaaaggcaagcaagtgagatggtatctgtcattgtgtcattcttcacttcctcatatgtgacgaagtggagtggtttcttccctcagaaagagttgaagtgccctccttattttgatgggcgtgctgtatgctatccgtcatctgatattcttcgagattatctggcatggaggcaagttgactgccatatcaacaatcaatacaatacttgtttttgggagcttgttatgtctggaaaaggcaaaagtgaagctcagaattttcttaagggtactcaagcaggcgacaaagatagactgcttaagcaatttggtattgactacaacaagttacaagttatgtttcgccaaggttcatccattttctgggataagggagatgttataccgatgaacaagaatgaggcgtctgttgaaaagtctggggaaaaagttgttgtagaacattgtaatattattgagccaagtttttggcacgcacacccaactattctgcatgggtga

Protein Analysis

522

Amino Acids

60.64

Weight (kDa)

6.95

Isoelectric Point (pI)

41.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 257
Acc36I ACCTGC 1 cut(s) 474
AccB7I CCANNNNNTGG 1 cut(s) 1431
AccIII TCCGGA 1 cut(s) 196
AclI AACGTT 1 cut(s) 104
AclWI GGATC 2 cut(s) 618, 631
AcoI YGGCCR 1 cut(s) 88
AcsI RAATTY 6 cut(s) 163, 341, 961, 989, 1051, 1324
AcuI CTGAAG 3 cut(s) 132, 554, 930
AcyI GRCGYC 2 cut(s) 254, 1472
AfaI GTAC 3 cut(s) 23, 475, 1339
AfiI CCNNNNNNNGG 2 cut(s) 355, 1431
AflII CTTAAG 2 cut(s) 1331, 1367
AgsI TTSAA 9 cut(s) 44, 247, 422, 575, 637, 812, 1045, 1162, 1481
AleI CACNNNNGTG 1 cut(s) 317
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
AluBI AGCT 9 cut(s) 237, 361, 490, 734, 778, 947, 1035, 1288, 1319
AluI AGCT 9 cut(s) 237, 361, 490, 734, 778, 947, 1035, 1288, 1319
Alw21I GWGCWC 1 cut(s) 780
Alw26I GTCTC 2 cut(s) 331, 433
AlwI GGATC 2 cut(s) 618, 631
Aor13HI TCCGGA 1 cut(s) 196
AoxI GGCC 1 cut(s) 88
ApoI RAATTY 6 cut(s) 163, 341, 961, 989, 1051, 1324
Asp700I GAANNNNTTC 1 cut(s) 106
AspLEI GCGC 1 cut(s) 404
AspS9I GGNCC 1 cut(s) 828
AsuHPI GGTGA 3 cut(s) 304, 658, 994
AsuII TTCGAA 2 cut(s) 100, 722
AvaII GGWCC 1 cut(s) 828
BaeGI GKGCMC 1 cut(s) 1169
BamHI GGATCC 1 cut(s) 623
BanII GRGCYC 1 cut(s) 780
BbsI GAAGAC 3 cut(s) 51, 235, 257
Bbv12I GWGCWC 1 cut(s) 780
BccI CCATC 7 cut(s) 494, 502, 643, 865, 878, 1078, 1175
BceAI ACGGC 3 cut(s) 75, 103, 956
BciVI GTATCC 1 cut(s) 313
BcoDI GTCTC 2 cut(s) 331, 433
BfaI CTAG 1 cut(s) 351
BfrI CTTAAG 2 cut(s) 1331, 1367
BfuAI ACCTGC 1 cut(s) 474
BfuI GTATCC 1 cut(s) 313
Bme18I GGWCC 1 cut(s) 828
BmgT120I GGNCC 1 cut(s) 828
BmiI GGNNCC 2 cut(s) 541, 625
BmsI GCATC 3 cut(s) 90, 595, 843
BpiI GAAGAC 3 cut(s) 51, 235, 257
BplI GAGNNNNNCTC 2 cut(s) 355, 387
BpmI CTGGAG 1 cut(s) 545
Bpu10I CCTNAGC 1 cut(s) 695
Bpu14I TTCGAA 2 cut(s) 100, 722
BpuEI CTTGAG 1 cut(s) 1326
Bsa29I ATCGAT 1 cut(s) 882
BsaHI GRCGYC 2 cut(s) 254, 1472
BsaJI CCNNGG 2 cut(s) 315, 1414
BsaWI WCCGGW 1 cut(s) 196
BsaXI ACNNNNNCTCC 2 cut(s) 430, 460
Bsc4I CCNNNNNNNGG 2 cut(s) 355, 1431
Bse1I ACTGG 3 cut(s) 528, 543, 835
BseAI TCCGGA 1 cut(s) 196
BseCI ATCGAT 1 cut(s) 882
BseDI CCNNGG 2 cut(s) 315, 1414
BseGI GGATG 2 cut(s) 610, 1421
BseLI CCNNNNNNNGG 2 cut(s) 355, 1431
BseMII CTCAG 6 cut(s) 353, 633, 838, 1070, 1163, 1334
BseNI ACTGG 3 cut(s) 528, 543, 835
BseRI GAGGAG 1 cut(s) 203
BseSI GKGCMC 1 cut(s) 1169
BseX3I CGGCCG 1 cut(s) 88
BseYI CCCAGC 1 cut(s) 734
BsgI GTGCAG 2 cut(s) 192, 452
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 1 cut(s) 90
BshVI ATCGAT 1 cut(s) 882
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 1 cut(s) 780
BsiSI CCGG 1 cut(s) 197
BslFI GGGAC 1 cut(s) 809
BslI CCNNNNNNNGG 2 cut(s) 355, 1431
BsmAI GTCTC 2 cut(s) 331, 433
BsmFI GGGAC 1 cut(s) 809
BsnI GGCC 1 cut(s) 90
Bsp119I TTCGAA 2 cut(s) 100, 722
Bsp1286I GDGCHC 2 cut(s) 780, 1169
Bsp13I TCCGGA 1 cut(s) 196
Bsp143I GATC 2 cut(s) 69, 623
BspANI GGCC 1 cut(s) 90
BspCNI CTCAG 6 cut(s) 354, 634, 837, 1069, 1162, 1333
BspDI ATCGAT 1 cut(s) 882
BspEI TCCGGA 1 cut(s) 196
BspHI TCATGA 1 cut(s) 916
BspLI GGNNCC 2 cut(s) 541, 625
BspMI ACCTGC 1 cut(s) 474
BspPI GGATC 2 cut(s) 618, 631
BspT104I TTCGAA 2 cut(s) 100, 722
BspTI CTTAAG 2 cut(s) 1331, 1367
BsrI ACTGG 3 cut(s) 528, 543, 835
BssECI CCNNGG 2 cut(s) 315, 1414
BssMI GATC 2 cut(s) 69, 623
BssNI GRCGYC 2 cut(s) 254, 1472
BssT1I CCWWGG 1 cut(s) 1414
Bst4CI ACNGT 1 cut(s) 473
Bst6I CTCTTC 1 cut(s) 546
BstACI GRCGYC 2 cut(s) 254, 1472
BstAFI CTTAAG 2 cut(s) 1331, 1367
BstBI TTCGAA 2 cut(s) 100, 722
BstC8I GCNNGC 9 cut(s) 276, 280, 400, 759, 945, 1074, 1188, 1348, 1542
BstDEI CTNAG 8 cut(s) 362, 642, 695, 767, 824, 1056, 1149, 1320
BstF5I GGATG 2 cut(s) 610, 1421
BstHHI GCGC 1 cut(s) 404
BstKTI GATC 2 cut(s) 72, 626
BstMAI GTCTC 2 cut(s) 331, 433
BstMBI GATC 2 cut(s) 69, 623
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 1 cut(s) 87
BstNSI RCATGY 1 cut(s) 761
BstSLI GKGCMC 1 cut(s) 1169
BstV2I GAAGAC 3 cut(s) 51, 235, 257
BstX2I RGATCY 1 cut(s) 623
BstXI CCANNNNNNTGG 2 cut(s) 864, 1536
BstYI RGATCY 1 cut(s) 623
BstZI CGGCCG 1 cut(s) 88
Bsu15I ATCGAT 1 cut(s) 882
BsuI GTATCC 1 cut(s) 313
BsuRI GGCC 1 cut(s) 90
BsuTUI ATCGAT 1 cut(s) 882
BtgZI GCGATG 1 cut(s) 1038
BtsCI GGATG 2 cut(s) 610, 1421
BtsIMutI CAGTG 3 cut(s) 186, 229, 521
BveI ACCTGC 1 cut(s) 474
Cac8I GCNNGC 9 cut(s) 276, 280, 400, 759, 945, 1074, 1188, 1348, 1542
CciI TCATGA 1 cut(s) 916
CfoI GCGC 1 cut(s) 404
Cfr13I GGNCC 1 cut(s) 828
ClaI ATCGAT 1 cut(s) 882
CseI GACGC 1 cut(s) 1461
Csp6I GTAC 3 cut(s) 22, 474, 1338
CviAII CATG 7 cut(s) 119, 168, 758, 917, 966, 1233, 1562
CviQI GTAC 3 cut(s) 22, 474, 1338
DdeI CTNAG 8 cut(s) 362, 642, 695, 767, 824, 1056, 1149, 1320
DpnI GATC 2 cut(s) 71, 625
DpnII GATC 2 cut(s) 69, 623
EaeI YGGCCR 1 cut(s) 88
EagI CGGCCG 1 cut(s) 88
Eam1104I CTCTTC 1 cut(s) 546
EarI CTCTTC 1 cut(s) 546
Ecl136II GAGCTC 1 cut(s) 778
EclXI CGGCCG 1 cut(s) 88
Eco130I CCWWGG 1 cut(s) 1414
Eco24I GRGCYC 1 cut(s) 780
Eco32I GATATC 1 cut(s) 368
Eco47I GGWCC 1 cut(s) 828
Eco52I CGGCCG 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 778
Eco57I CTGAAG 3 cut(s) 132, 554, 930
EcoICRI GAGCTC 1 cut(s) 778
EcoO109I RGGNCCY 1 cut(s) 828
EcoRI GAATTC 4 cut(s) 163, 341, 961, 1051
EcoRV GATATC 1 cut(s) 368
EcoT14I CCWWGG 1 cut(s) 1414
EcoT38I GRGCYC 1 cut(s) 780
ErhI CCWWGG 1 cut(s) 1414
FaeI CATG 7 cut(s) 122, 171, 761, 920, 969, 1236, 1565
FaqI GGGAC 1 cut(s) 809
FatI CATG 7 cut(s) 118, 167, 757, 916, 965, 1232, 1561
FauNDI CATATG 1 cut(s) 1120
FokI GGATG 2 cut(s) 617, 1408
FriOI GRGCYC 1 cut(s) 780
FspBI CTAG 1 cut(s) 351
GlaI GCGC 1 cut(s) 403
GsaI CCCAGC 1 cut(s) 738
GsuI CTGGAG 1 cut(s) 545
HaeIII GGCC 1 cut(s) 90
HapII CCGG 1 cut(s) 197
HgaI GACGC 1 cut(s) 1461
HhaI GCGC 1 cut(s) 404
Hin1I GRCGYC 2 cut(s) 254, 1472
Hin1II CATG 7 cut(s) 122, 171, 761, 920, 969, 1236, 1565
Hin6I GCGC 1 cut(s) 402
HinP1I GCGC 1 cut(s) 402
HincII GTYRAC 1 cut(s) 1246
HindII GTYRAC 1 cut(s) 1246
HinfI GANTC 3 cut(s) 290, 763, 879
HpaII CCGG 1 cut(s) 197
HphI GGTGA 3 cut(s) 304, 658, 994
Hpy166II GTNNAC 2 cut(s) 906, 1246
Hpy188I TCNGA 5 cut(s) 112, 187, 1152, 1210, 1323
Hpy188III TCNNGA 8 cut(s) 197, 247, 328, 917, 995, 1045, 1220, 1299
Hpy8I GTNNAC 2 cut(s) 906, 1246
Hpy99I CGWCG 2 cut(s) 77, 89
HpyAV CCTTC 5 cut(s) 316, 384, 529, 575, 841
HpyCH4III ACNGT 1 cut(s) 473
HpyCH4IV ACGT 4 cut(s) 24, 104, 254, 863
HpyCH4V TGCA 5 cut(s) 118, 173, 469, 630, 1561
HpyF10VI GCNNNNNNNGC 1 cut(s) 87
HpyF3I CTNAG 8 cut(s) 362, 642, 695, 767, 824, 1056, 1149, 1320
HpySE526I ACGT 4 cut(s) 24, 104, 254, 863
Hsp92I GRCGYC 2 cut(s) 254, 1472
Hsp92II CATG 7 cut(s) 122, 171, 761, 920, 969, 1236, 1565
HspAI GCGC 1 cut(s) 402
Kpn2I TCCGGA 1 cut(s) 196
Kzo9I GATC 2 cut(s) 69, 623
LmnI GCTCC 4 cut(s) 358, 487, 539, 1285
LweI GCATC 3 cut(s) 90, 595, 843
MaeI CTAG 1 cut(s) 351
MaeII ACGT 4 cut(s) 24, 104, 254, 863
MaeIII GTNAC 4 cut(s) 224, 528, 1123, 1395
MalI GATC 2 cut(s) 71, 625
MboI GATC 2 cut(s) 69, 623
MflI RGATCY 1 cut(s) 623
MhlI GDGCHC 2 cut(s) 780, 1169
MluCI AATT 9 cut(s) 163, 341, 599, 848, 961, 989, 1051, 1324, 1373
MlyI GAGTC 2 cut(s) 299, 772
MmeI TCCRAC 1 cut(s) 165
MroI TCCGGA 1 cut(s) 196
MroXI GAANNNNTTC 1 cut(s) 106
MseI TTAA 2 cut(s) 1332, 1368
MslI CAYNNNNRTG 2 cut(s) 317, 862
MspCI CTTAAG 2 cut(s) 1331, 1367
MspI CCGG 1 cut(s) 197
MwoI GCNNNNNNNGC 1 cut(s) 87
NdeI CATATG 1 cut(s) 1120
NdeII GATC 2 cut(s) 69, 623
NlaIII CATG 7 cut(s) 122, 171, 761, 920, 969, 1236, 1565
NlaIV GGNNCC 2 cut(s) 541, 625
NmuCI GTSAC 2 cut(s) 224, 1123
NspI RCATGY 1 cut(s) 761
NspV TTCGAA 2 cut(s) 100, 722
OliI CACNNNNGTG 1 cut(s) 317
PaeI GCATGC 1 cut(s) 761
PagI TCATGA 1 cut(s) 916
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PdmI GAANNNNTTC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 879
PflMI CCANNNNNTGG 1 cut(s) 1431
PleI GAGTC 2 cut(s) 298, 771
PpsI GAGTC 2 cut(s) 298, 771
PpuMI RGGWCCY 1 cut(s) 828
Psp124BI GAGCTC 1 cut(s) 780
Psp1406I AACGTT 1 cut(s) 104
Psp5II RGGWCCY 1 cut(s) 828
PspFI CCCAGC 1 cut(s) 734
PspN4I GGNNCC 2 cut(s) 541, 625
PspPI GGNCC 1 cut(s) 828
PspPPI RGGWCCY 1 cut(s) 828
PsuI RGATCY 1 cut(s) 623
RsaI GTAC 3 cut(s) 23, 475, 1339
RsaNI GTAC 3 cut(s) 22, 474, 1338
RseI CAYNNNNRTG 2 cut(s) 317, 862
SacI GAGCTC 1 cut(s) 780
SaqAI TTAA 2 cut(s) 1332, 1368
Sau3AI GATC 2 cut(s) 69, 623
Sau96I GGNCC 1 cut(s) 828
SchI GAGTC 2 cut(s) 299, 772
SduI GDGCHC 2 cut(s) 780, 1169
SfaNI GCATC 3 cut(s) 90, 595, 843
SfuI TTCGAA 2 cut(s) 100, 722
SinI GGWCC 1 cut(s) 828
SmiMI CAYNNNNRTG 2 cut(s) 317, 862
SmlI CTYRAG 3 cut(s) 1331, 1341, 1367
SmoI CTYRAG 3 cut(s) 1331, 1341, 1367
SphI GCATGC 1 cut(s) 761
Sse9I AATT 9 cut(s) 163, 341, 599, 848, 961, 989, 1051, 1324, 1373
SspI AATATT 1 cut(s) 1519
SspMI CTAG 1 cut(s) 351
SstI GAGCTC 1 cut(s) 780
StyI CCWWGG 1 cut(s) 1414
TaaI ACNGT 1 cut(s) 473
TaiI ACGT 4 cut(s) 27, 107, 257, 866
TaqI TCGA 6 cut(s) 84, 100, 329, 722, 882, 1219
TasI AATT 9 cut(s) 163, 341, 599, 848, 961, 989, 1051, 1324, 1373
TfiI GAWTC 1 cut(s) 879
Tru1I TTAA 2 cut(s) 1332, 1368
Tru9I TTAA 2 cut(s) 1332, 1368
TscAI CASTG 3 cut(s) 186, 229, 528
TseFI GTSAC 2 cut(s) 224, 1123
Tsp45I GTSAC 2 cut(s) 224, 1123
TspDTI ATGAA 9 cut(s) 156, 176, 707, 905, 954, 974, 1041, 1410, 1472
TspGWI ACGGA 2 cut(s) 605, 1191
TspRI CASTG 3 cut(s) 186, 229, 528
Van91I CCANNNNNTGG 1 cut(s) 1431
Vha464I CTTAAG 2 cut(s) 1331, 1367
VpaK11BI GGWCC 1 cut(s) 828
XapI RAATTY 6 cut(s) 163, 341, 961, 989, 1051, 1324
XceI RCATGY 1 cut(s) 761
XmnI GAANNNNTTC 1 cut(s) 106
XspI CTAG 1 cut(s) 351
ZraI GACGTC 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.