Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002254

Physical Location & Seq

Genomic Coordinates Reverse (-)

17164367 .. 17169108

Gene Structure 4742 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0123800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGTCGGATTCCGGCGACGAGATTCCATCTCCGGACACCTCCCTCTCCCACAAGCTGACCTCCAAAACCGAGCTCCTCAACCTCAAGCTCTACGTCGTGATCGCAATCCTCCTCGCCGGCGTCTTTGCCGTGTTTCTCCTCGTCTGCCTCTGCGTCCGCGCCCATCGGGTTTCGCGTCGCCGGAAGAGCCGCATCCGCGTGAAGCACAGCTCCGGCTCAATCCCGCTCGTCTCCAAAGAGATCGCCGAGATCAAGGAACCTCGTCCGGATCCTTCTCCTTCACCTCCTCCTGCCGCCGCCGCCGCCGAGGGCAAAATCGGAAACCAAAAGTTGAAGGAAGCGCGACCGACTGAACCGACCGTTGATGTGGAAAATGGGAAAAGGAGGAGCGGGGTGAGTGACGTGTTCGGGTGGGGCCGGTGGTATAGCCTCAGGGAGCTGGAGACCGCGACACGTGGATTCTCGCCAGAGAATGTGATTGGAGAAGGAGGGTACGGCGTCGTTTACCGGGGATCTTTGCAGGACGGCTCTGTTGTCGCCGTCAAGAACCTTCTTAACAACAAGGGTCAAGCTCAGACAGAGTTTAAGGTGGAAGTGGAAGCCATAGGAAAAGTAAAGCATAAGAACTTGGTTGGTCTAATTGGTTATTGTGCAGAAGGTGCTCAAAGGATGCTTGTATATGAATATATTGACAATGGGAATTTGGAGCAGTGGTTGCATGGTGATGTTGGGCCTGTCAGCCCTCTGACTTGGGATATCAGAATGAAGATAGCCATTGGAACCGCAAAAGGGCTGGCCTATTTACATGAAGGGTTAGAACCCAAAGTGGTGCACCGTGATATAAAATCCAGTAACATTCTTCTGGACAGAAAGTGGAACCCAAGAGTATCAGATTTTGGTTTGGCCAAACTCTTGGGACCCGAGTCAAGCTATGTGACTACACGTGTAATGGGGACATTCGGATATGTTTCTCCAGAGTATGCAAGTACAGGTATGCTTAATGAGGGGAGTGATGTATATAGTTTTGGAGTTCTACTTATGGAGATAATTACAGGAAGAAGCCCAATTGACTATTCCAGACCAGCTGGAGAGATGAACCTGGTTGATTGGTTTAAAGGAATGATTTCAAGTCGCCGTGGGGAGGAGATTTTAGATCCATTGATAGAAGTTCAGCCCCCTCCAAGATCTTTGAAGCGAGCATTGTTGGTTTGTCTCCGCTGTATAGATTTAGATGTCCATAAGCGGCCAAAAATGGGGCAAATTGTTCATATGCTTGAGGCAGAAGACTTTCCTTTTCGTTCGGAAACCCGATCAGCTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000086 GO:0000166 GO:0000278 GO:0000287 GO:0000966 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007049 GO:0008033 GO:0008144 GO:0008150 GO:0008152 GO:0008192 GO:0008193 GO:0008283 GO:0009451 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0017076 GO:0019001 GO:0022402 GO:0022607 GO:0030554 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032559 GO:0032561 GO:0033554 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0042802 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044839 GO:0046483 GO:0046872 GO:0050896 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0051716 GO:0065003 GO:0070013 GO:0070568 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097367 GO:0099116 GO:1901265 GO:1901360 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thg1 Thg1C

Protein Analysis

440

Amino Acids

48.66

Weight (kDa)

8.99

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	157 - 425	6e-45	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	157 - 423	3.3e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002254)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31580 AT2G31580 AT2G31580 AT2G31580 AT2G31580 AT2G32320 AT2G32320 AT2G32320
fragaria_vesca	FvH4_1g22971 FvH4_1g22971 FvH4_1g22971 FvH4_1g22971 FvH4_1g22971 FvH4_1g22971 FvH4_1g22971 FvH4_2g15830
malus_domestica	MD05G1030700.v1.1
prunus_persica	Prupe.1G573900_v2.0.a1
pyrus_communis	pycom05g02180 pycom10g02040
rosa_chinensis	RchiOBHm_Chr2g0117491 RchiOBHm_Chr2g0117501 RchiOBHm_Chr6g0279211
rosa_laevigata	RLG00000013155 RLG00000018350
rosa_multiflora	Rmu_co8223372.1_g000001 Rmu_sc0003454.1_g000019 Rmu_sc0003454.1_g000020 Rmu_sc0014203.1_g000009 Rmu_sc0014536.1_g000004 Rmu_sc0041068.1_g000002
rosa_roxburghii	Rroxscaffold_2G00126490 Rroxscaffold_7G00189030
rosa_rugosa	Rorug02G0212800 Rorug06G0123800
rosa_samantha	Rh2CG271800 Rh2DG275200 Rh2DG294700 Rh6AG232000 Rh6BG236900 Rh6CG238800 Rh6DG230400
rosa_wichuraiana	Rw6G020310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	226, 390
AccII	CGCG	5 cut(s)	159, 175, 198, 343, 449
AccIII	TCCGGA	2 cut(s)	31, 265
AclWI	GGATC	4 cut(s)	263, 276, 520, 1148
AcoI	YGGCCR	2 cut(s)	903, 1244
AcsI	RAATTY	1 cut(s)	700
AcvI	CACGTG	2 cut(s)	455, 944
AcyI	GRCGYC	2 cut(s)	120, 498
AfaI	GTAC	2 cut(s)	494, 988
AfiI	CCNNNNNNNGG	3 cut(s)	789, 1141, 1253
AflIII	ACRYGT	4 cut(s)	402, 452, 941, 943
AgsI	TTSAA	3 cut(s)	334, 1128, 1192
AjiI	CACGTC	1 cut(s)	403
AjnI	CCWGG	1 cut(s)	1098
AjuI	GAANNNNNNNTTGG	2 cut(s)	1057, 1089
AluBI	AGCT	9 cut(s)	55, 73, 88, 210, 439, 572, 930, 1085, 1316
AluI	AGCT	9 cut(s)	55, 73, 88, 210, 439, 572, 930, 1085, 1316
Alw21I	GWGCWC	3 cut(s)	75, 664, 834
Alw26I	GTCTC	3 cut(s)	235, 437, 1217
Alw44I	GTGCAC	1 cut(s)	830
AlwI	GGATC	4 cut(s)	263, 276, 520, 1148
Ama87I	CYCGRG	1 cut(s)	920
Aor13HI	TCCGGA	2 cut(s)	31, 265
AoxI	GGCC	5 cut(s)	415, 731, 795, 903, 1244
ApaLI	GTGCAC	1 cut(s)	830
ApoI	RAATTY	1 cut(s)	700
Asp700I	GAANNNNTTC	2 cut(s)	1123, 1287
AspLEI	GCGC	2 cut(s)	161, 343
AspS9I	GGNCC	3 cut(s)	415, 731, 917
AsuC2I	CCSGG	1 cut(s)	509
AsuHPI	GGTGA	3 cut(s)	273, 406, 734
AvaI	CYCGRG	1 cut(s)	920
AvaII	GGWCC	1 cut(s)	917
AxyI	CCTNAGG	1 cut(s)	431
BaeGI	GKGCMC	1 cut(s)	834
BalI	TGGCCA	1 cut(s)	905
BamHI	GGATCC	1 cut(s)	268
BanII	GRGCYC	1 cut(s)	75
BbrPI	CACGTG	2 cut(s)	455, 944
BbsI	GAAGAC	1 cut(s)	1290
Bbv12I	GWGCWC	3 cut(s)	75, 664, 834
BccI	CCATC	2 cut(s)	34, 171
BceAI	ACGGC	5 cut(s)	113, 511, 524, 541, 1119
BciT130I	CCWGG	1 cut(s)	1100
BcnI	CCSGG	1 cut(s)	509
BcoDI	GTCTC	3 cut(s)	235, 437, 1217
BglII	AGATCT	1 cut(s)	1184
BisI	GCNGC	6 cut(s)	190, 294, 297, 300, 303, 1244
BlsI	GCNGC	6 cut(s)	191, 295, 298, 301, 304, 1245
Bme1390I	CCNGG	2 cut(s)	509, 1100
Bme18I	GGWCC	1 cut(s)	917
BmeT110I	CYCGRG	1 cut(s)	920
BmgBI	CACGTC	1 cut(s)	403
BmgT120I	GGNCC	3 cut(s)	415, 731, 917
BmiI	GGNNCC	7 cut(s)	258, 270, 416, 781, 878, 918, 919
BmrFI	CCNGG	2 cut(s)	509, 1100
BmsI	GCATC	2 cut(s)	201, 660
BoxI	GACNNNNGTC	1 cut(s)	922
BpiI	GAAGAC	1 cut(s)	1290
BpmI	CTGGAG	3 cut(s)	461, 957, 1107
BpuEI	CTTGAG	2 cut(s)	68, 1295
BpuMI	CCSGG	1 cut(s)	509
BsaAI	YACGTR	2 cut(s)	455, 944
BsaBI	GATNNNNATC	1 cut(s)	104
BsaHI	GRCGYC	2 cut(s)	120, 498
BsaI	GGTCTC	1 cut(s)	437
BsaJI	CCNNGG	3 cut(s)	306, 508, 1135
BsaWI	WCCGGW	2 cut(s)	31, 265
BsaXI	ACNNNNNCTCC	2 cut(s)	698, 728
Bsc4I	CCNNNNNNNGG	3 cut(s)	789, 1141, 1253
Bse118I	RCCGGY	2 cut(s)	116, 417
Bse1I	ACTGG	1 cut(s)	849
Bse21I	CCTNAGG	1 cut(s)	431
Bse8I	GATNNNNATC	1 cut(s)	104
BseAI	TCCGGA	2 cut(s)	31, 265
BseBI	CCWGG	1 cut(s)	1100
BseDI	CCNNGG	3 cut(s)	306, 508, 1135
BseGI	GGATG	2 cut(s)	192, 675
BseJI	GATNNNNATC	1 cut(s)	104
BseLI	CCNNNNNNNGG	3 cut(s)	789, 1141, 1253
BseMII	CTCAG	2 cut(s)	445, 587
BseNI	ACTGG	1 cut(s)	849
BseRI	GAGGAG	6 cut(s)	65, 101, 128, 276, 400, 1157
BseSI	GKGCMC	1 cut(s)	834
BsgI	GTGCAG	1 cut(s)	672
Bsh1236I	CGCG	5 cut(s)	159, 175, 198, 343, 449
Bsh1285I	CGRYCG	2 cut(s)	347, 360
BshFI	GGCC	5 cut(s)	417, 733, 797, 905, 1246
BsiEI	CGRYCG	2 cut(s)	347, 360
BsiHKAI	GWGCWC	3 cut(s)	75, 664, 834
BsiHKCI	CYCGRG	1 cut(s)	920
BsiSI	CCGG	8 cut(s)	12, 32, 117, 181, 213, 266, 418, 508
BslFI	GGGAC	2 cut(s)	930, 967
BslI	CCNNNNNNNGG	3 cut(s)	789, 1141, 1253
BsmAI	GTCTC	3 cut(s)	235, 437, 1217
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	2 cut(s)	930, 967
BsnI	GGCC	5 cut(s)	417, 733, 797, 905, 1246
Bso31I	GGTCTC	1 cut(s)	437
BsoBI	CYCGRG	1 cut(s)	920
Bsp1286I	GDGCHC	3 cut(s)	75, 664, 834
Bsp13I	TCCGGA	2 cut(s)	31, 265
Bsp143I	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
BspANI	GGCC	5 cut(s)	417, 733, 797, 905, 1246
BspCNI	CTCAG	2 cut(s)	444, 586
BspEI	TCCGGA	2 cut(s)	31, 265
BspFNI	CGCG	5 cut(s)	159, 175, 198, 343, 449
BspLI	GGNNCC	7 cut(s)	258, 270, 416, 781, 878, 918, 919
BspPI	GGATC	4 cut(s)	263, 276, 520, 1148
BspQI	GCTCTTC	1 cut(s)	179
BspTNI	GGTCTC	1 cut(s)	437
BsrBI	CCGCTC	2 cut(s)	226, 390
BsrFI	RCCGGY	2 cut(s)	116, 417
BsrI	ACTGG	1 cut(s)	849
BssAI	RCCGGY	2 cut(s)	116, 417
BssECI	CCNNGG	3 cut(s)	306, 508, 1135
BssMI	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
BssNI	GRCGYC	2 cut(s)	120, 498
Bst2UI	CCWGG	1 cut(s)	1100
Bst4CI	ACNGT	2 cut(s)	361, 836
Bst6I	CTCTTC	1 cut(s)	179
BstACI	GRCGYC	2 cut(s)	120, 498
BstAPI	GCANNNNNTGC	2 cut(s)	659, 715
BstBAI	YACGTR	2 cut(s)	455, 944
BstC8I	GCNNGC	3 cut(s)	118, 795, 1197
BstDEI	CTNAG	2 cut(s)	431, 573
BstDSI	CCRYGG	1 cut(s)	1135
BstF5I	GGATG	2 cut(s)	192, 675
BstFNI	CGCG	5 cut(s)	159, 175, 198, 343, 449
BstHHI	GCGC	2 cut(s)	161, 343
BstKTI	GATC	8 cut(s)	102, 243, 252, 271, 515, 1156, 1187, 1313
BstMAI	GTCTC	3 cut(s)	235, 437, 1217
BstMBI	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
BstMCI	CGRYCG	2 cut(s)	347, 360
BstMWI	GCNNNNNNNGC	6 cut(s)	186, 195, 299, 302, 659, 715
BstNI	CCWGG	1 cut(s)	1100
BstPAI	GACNNNNGTC	1 cut(s)	922
BstSCI	CCNGG	2 cut(s)	507, 1098
BstSLI	GKGCMC	1 cut(s)	834
BstUI	CGCG	5 cut(s)	159, 175, 198, 343, 449
BstV2I	GAAGAC	1 cut(s)	1290
BstX2I	RGATCY	4 cut(s)	268, 512, 1153, 1184
BstXI	CCANNNNNNTGG	1 cut(s)	913
BstYI	RGATCY	4 cut(s)	268, 512, 1153, 1184
Bsu36I	CCTNAGG	1 cut(s)	431
BsuRI	GGCC	5 cut(s)	417, 733, 797, 905, 1246
BtgI	CCRYGG	1 cut(s)	1135
BtrI	CACGTC	1 cut(s)	403
BtsCI	GGATG	2 cut(s)	192, 675
BtsI	GCAGTG	1 cut(s)	716
BtsIMutI	CAGTG	1 cut(s)	716
Cac8I	GCNNGC	3 cut(s)	118, 795, 1197
CfoI	GCGC	2 cut(s)	161, 343
Cfr10I	RCCGGY	2 cut(s)	116, 417
Cfr13I	GGNCC	3 cut(s)	415, 731, 917
CseI	GACGC	4 cut(s)	109, 142, 164, 487
CsiI	ACCWGGT	1 cut(s)	1098
Csp6I	GTAC	2 cut(s)	493, 987
CviAII	CATG	2 cut(s)	719, 806
CviQI	GTAC	2 cut(s)	493, 987
DdeI	CTNAG	2 cut(s)	431, 573
DpnI	GATC	8 cut(s)	101, 242, 251, 270, 514, 1155, 1186, 1312
DpnII	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
DraI	TTTAAA	1 cut(s)	1114
EaeI	YGGCCR	2 cut(s)	903, 1244
Eam1104I	CTCTTC	1 cut(s)	179
EarI	CTCTTC	1 cut(s)	179
Ecl136II	GAGCTC	1 cut(s)	73
Eco24I	GRGCYC	1 cut(s)	75
Eco31I	GGTCTC	1 cut(s)	437
Eco32I	GATATC	1 cut(s)	757
Eco47I	GGWCC	1 cut(s)	917
Eco53kI	GAGCTC	1 cut(s)	73
Eco72I	CACGTG	2 cut(s)	455, 944
Eco81I	CCTNAGG	1 cut(s)	431
Eco88I	CYCGRG	1 cut(s)	920
EcoICRI	GAGCTC	1 cut(s)	73
EcoO109I	RGGNCCY	1 cut(s)	917
EcoRII	CCWGG	1 cut(s)	1098
EcoRV	GATATC	1 cut(s)	757
EcoT38I	GRGCYC	1 cut(s)	75
Esp3I	CGTCTC	1 cut(s)	235
FaeI	CATG	2 cut(s)	722, 809
FaqI	GGGAC	2 cut(s)	930, 967
FatI	CATG	2 cut(s)	718, 805
FauI	CCCGC	2 cut(s)	231, 383
FauNDI	CATATG	1 cut(s)	1269
Fnu4HI	GCNGC	6 cut(s)	190, 294, 297, 300, 303, 1244
FokI	GGATG	2 cut(s)	179, 682
FriOI	GRGCYC	1 cut(s)	75
Fsp4HI	GCNGC	6 cut(s)	190, 294, 297, 300, 303, 1244
GlaI	GCGC	2 cut(s)	160, 342
GluI	GCNGC	6 cut(s)	190, 294, 297, 300, 303, 1244
GsuI	CTGGAG	3 cut(s)	461, 957, 1107
HaeIII	GGCC	5 cut(s)	417, 733, 797, 905, 1246
HapII	CCGG	8 cut(s)	12, 32, 117, 181, 213, 266, 418, 508
HgaI	GACGC	4 cut(s)	109, 142, 164, 487
HhaI	GCGC	2 cut(s)	161, 343
Hin1I	GRCGYC	2 cut(s)	120, 498
Hin1II	CATG	2 cut(s)	722, 809
Hin6I	GCGC	2 cut(s)	159, 341
HinP1I	GCGC	2 cut(s)	159, 341
HinfI	GANTC	4 cut(s)	8, 22, 459, 923
HpaII	CCGG	8 cut(s)	12, 32, 117, 181, 213, 266, 418, 508
HphI	GGTGA	3 cut(s)	273, 406, 734
Hpy166II	GTNNAC	2 cut(s)	505, 832
Hpy188I	TCNGA	8 cut(s)	7, 320, 576, 747, 761, 892, 962, 1303
Hpy188III	TCNNGA	7 cut(s)	32, 97, 266, 544, 863, 974, 1077
Hpy8I	GTNNAC	2 cut(s)	505, 832
Hpy99I	CGWCG	4 cut(s)	20, 98, 180, 503
HpyAV	CCTTC	7 cut(s)	282, 288, 328, 479, 560, 650, 803
HpyCH4III	ACNGT	2 cut(s)	361, 836
HpyCH4IV	ACGT	4 cut(s)	93, 402, 454, 943
HpyCH4V	TGCA	5 cut(s)	520, 653, 718, 832, 983
HpyF10VI	GCNNNNNNNGC	6 cut(s)	186, 195, 299, 302, 659, 715
HpyF3I	CTNAG	2 cut(s)	431, 573
HpySE526I	ACGT	4 cut(s)	93, 402, 454, 943
Hsp92I	GRCGYC	2 cut(s)	120, 498
Hsp92II	CATG	2 cut(s)	722, 809
HspAI	GCGC	2 cut(s)	159, 341
KflI	GGGWCCC	1 cut(s)	917
Kpn2I	TCCGGA	2 cut(s)	31, 265
KroI	GCCGGC	1 cut(s)	116
KroNI	GCCGGC	1 cut(s)	118
Kzo9I	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
LguI	GCTCTTC	1 cut(s)	179
LmnI	GCTCC	5 cut(s)	78, 215, 387, 436, 706
LweI	GCATC	2 cut(s)	201, 660
MabI	ACCWGGT	1 cut(s)	1098
MaeII	ACGT	4 cut(s)	93, 402, 454, 943
MaeIII	GTNAC	3 cut(s)	398, 851, 934
MalI	GATC	8 cut(s)	101, 242, 251, 270, 514, 1155, 1186, 1312
MbiI	CCGCTC	2 cut(s)	226, 390
MboI	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
MboII	GAAGA	5 cut(s)	196, 778, 851, 1068, 1295
MfeI	CAATTG	1 cut(s)	1065
MflI	RGATCY	4 cut(s)	268, 512, 1153, 1184
MhlI	GDGCHC	3 cut(s)	75, 664, 834
MlsI	TGGCCA	1 cut(s)	905
MluCI	AATT	5 cut(s)	639, 700, 1047, 1065, 1260
MluNI	TGGCCA	1 cut(s)	905
MlyI	GAGTC	1 cut(s)	932
Mox20I	TGGCCA	1 cut(s)	905
MreI	CGCCGGCG	1 cut(s)	116
MroI	TCCGGA	2 cut(s)	31, 265
MroNI	GCCGGC	1 cut(s)	116
MroXI	GAANNNNTTC	2 cut(s)	1123, 1287
MscI	TGGCCA	1 cut(s)	905
MseI	TTAA	4 cut(s)	555, 585, 999, 1113
MslI	CAYNNNNRTG	2 cut(s)	197, 723
Msp20I	TGGCCA	1 cut(s)	905
MspA1I	CMGCKG	2 cut(s)	1085, 1218
MspI	CCGG	8 cut(s)	12, 32, 117, 181, 213, 266, 418, 508
MspR9I	CCNGG	2 cut(s)	509, 1100
MunI	CAATTG	1 cut(s)	1065
MvaI	CCWGG	1 cut(s)	1100
MvnI	CGCG	5 cut(s)	159, 175, 198, 343, 449
MwoI	GCNNNNNNNGC	6 cut(s)	186, 195, 299, 302, 659, 715
NaeI	GCCGGC	1 cut(s)	118
NciI	CCSGG	1 cut(s)	509
NdeI	CATATG	1 cut(s)	1269
NdeII	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
NgoMIV	GCCGGC	1 cut(s)	116
NlaIII	CATG	2 cut(s)	722, 809
NlaIV	GGNNCC	7 cut(s)	258, 270, 416, 781, 878, 918, 919
NmeAIII	GCCGAG	2 cut(s)	271, 331
NmuCI	GTSAC	2 cut(s)	398, 934
PciSI	GCTCTTC	1 cut(s)	179
PcsI	WCGNNNNNNNCGW	1 cut(s)	172
PdiI	GCCGGC	1 cut(s)	118
PdmI	GAANNNNTTC	2 cut(s)	1123, 1287
PfeI	GAWTC	3 cut(s)	8, 22, 459
PkrI	GCNGC	6 cut(s)	191, 295, 298, 301, 304, 1245
PleI	GAGTC	1 cut(s)	931
PmaCI	CACGTG	2 cut(s)	455, 944
PmlI	CACGTG	2 cut(s)	455, 944
PpsI	GAGTC	1 cut(s)	931
Ppu21I	YACGTR	2 cut(s)	455, 944
PpuMI	RGGWCCY	1 cut(s)	917
PshAI	GACNNNNGTC	1 cut(s)	922
Psp124BI	GAGCTC	1 cut(s)	75
Psp5II	RGGWCCY	1 cut(s)	917
Psp6I	CCWGG	1 cut(s)	1098
PspCI	CACGTG	2 cut(s)	455, 944
PspGI	CCWGG	1 cut(s)	1098
PspN4I	GGNNCC	7 cut(s)	258, 270, 416, 781, 878, 918, 919
PspPI	GGNCC	3 cut(s)	415, 731, 917
PspPPI	RGGWCCY	1 cut(s)	917
PsuI	RGATCY	4 cut(s)	268, 512, 1153, 1184
PvuII	CAGCTG	1 cut(s)	1085
RsaI	GTAC	2 cut(s)	494, 988
RsaNI	GTAC	2 cut(s)	493, 987
RseI	CAYNNNNRTG	2 cut(s)	197, 723
SacI	GAGCTC	1 cut(s)	75
SapI	GCTCTTC	1 cut(s)	179
SaqAI	TTAA	4 cut(s)	555, 585, 999, 1113
SatI	GCNGC	6 cut(s)	190, 294, 297, 300, 303, 1244
Sau3AI	GATC	8 cut(s)	99, 240, 249, 268, 512, 1153, 1184, 1310
Sau96I	GGNCC	3 cut(s)	415, 731, 917
SchI	GAGTC	1 cut(s)	932
ScrFI	CCNGG	2 cut(s)	509, 1100
SduI	GDGCHC	3 cut(s)	75, 664, 834
SexAI	ACCWGGT	1 cut(s)	1098
SfaNI	GCATC	2 cut(s)	201, 660
SgrAI	CRCCGGYG	1 cut(s)	116
SinI	GGWCC	1 cut(s)	917
SmiMI	CAYNNNNRTG	2 cut(s)	197, 723
SmlI	CTYRAG	2 cut(s)	83, 1274
SmoI	CTYRAG	2 cut(s)	83, 1274
Sse9I	AATT	5 cut(s)	639, 700, 1047, 1065, 1260
SstI	GAGCTC	1 cut(s)	75
StyD4I	CCNGG	2 cut(s)	507, 1098
TaaI	ACNGT	2 cut(s)	361, 836
TaiI	ACGT	4 cut(s)	96, 405, 457, 946
TaqI	TCGA	1 cut(s)	1318
TaqII	GACCGA	1 cut(s)	361
TasI	AATT	5 cut(s)	639, 700, 1047, 1065, 1260
TatI	WGTACW	1 cut(s)	986
TauI	GCSGC	6 cut(s)	192, 296, 299, 302, 305, 1246
TfiI	GAWTC	3 cut(s)	8, 22, 459
Tru1I	TTAA	4 cut(s)	555, 585, 999, 1113
Tru9I	TTAA	4 cut(s)	555, 585, 999, 1113
TscAI	CASTG	1 cut(s)	716
TseFI	GTSAC	2 cut(s)	398, 934
Tsp45I	GTSAC	2 cut(s)	398, 934
TspDTI	ATGAA	5 cut(s)	696, 779, 822, 1109, 1256
TspRI	CASTG	1 cut(s)	716
VneI	GTGCAC	1 cut(s)	830
VpaK11BI	GGWCC	1 cut(s)	917
XapI	RAATTY	1 cut(s)	700
XmnI	GAANNNNTTC	2 cut(s)	1123, 1287

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.