Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14790 |
| fragaria_vesca | FvH4_4g33391 FvH4_4g33391 FvH4_4g33391 FvH4_4g33391 FvH4_4g33391 FvH4_4g33391 |
| malus_domestica | MD13G1019300.v1.1 MD13G1041300.v1.1 MD16G1017200.v1.1 |
| prunus_persica | Prupe.1G334600_v2.0.a1 Prupe.1G334600_v2.0.a1 |
| pyrus_communis | pycom13g01640 pycom13g03560 pycom13g03580 pycom16g01590 |
| rosa_chinensis | RchiOBHm_Chr4g0442681 RchiOBHm_Chr4g0442701 |
| rosa_laevigata | RLG00000005990 RLG00000005992 |
| rosa_multiflora | Rmu_ssc0000204.1_g000024 Rmu_ssc0000204.1_g000026 |
| rosa_roxburghii | Rroxscaffold_5G00383490 Rroxscaffold_5G00383510 |
| rosa_rugosa | Rorug04G0342200 Rorug04G0342300 |
| rosa_samantha | Rh4AG394700 Rh4AG394900 Rh4BG407600 Rh4CG423000 Rh4CG423600 Rh4DG401700 Rh4DG401900 |
| rosa_wichuraiana | Rw4G034110 Rw4G034130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 426, 756, 1863, 4263, 5553 |
| AarI | CACCTGC | 1 cut(s) | 5695 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2617 |
| Acc36I | ACCTGC | 2 cut(s) | 4540, 5695 |
| Acc65I | GGTACC | 4 cut(s) | 3042, 3091, 3492, 6720 |
| AccB1I | GGYRCC | 6 cut(s) | 154, 410, 3042, 3091, 3492, 6720 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2188, 6022, 6236 |
| AccBSI | CCGCTC | 1 cut(s) | 6595 |
| AccI | GTMKAC | 4 cut(s) | 963, 3360, 5390, 6222 |
| AccII | CGCG | 3 cut(s) | 3540, 3916, 6200 |
| AccIII | TCCGGA | 1 cut(s) | 1402 |
| AcoI | YGGCCR | 2 cut(s) | 3644, 3648 |
| AcuI | CTGAAG | 7 cut(s) | 623, 1038, 1874, 2862, 3906, 3947, 6696 |
| AcvI | CACGTG | 2 cut(s) | 371, 4010 |
| AcyI | GRCGYC | 1 cut(s) | 3363 |
| AdeI | CACNNNGTG | 2 cut(s) | 2188, 6094 |
| AflII | CTTAAG | 1 cut(s) | 5854 |
| AflIII | ACRYGT | 2 cut(s) | 864, 1943 |
| AgeI | ACCGGT | 2 cut(s) | 2534, 3094 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2567, 2908 |
| AhlI | ACTAGT | 1 cut(s) | 2542 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1424, 1456, 2399, 2431, 5926, 5958 |
| AleI | CACNNNNGTG | 2 cut(s) | 3567, 5838 |
| Alw21I | GWGCWC | 6 cut(s) | 19, 288, 544, 4054, 6090, 6198 |
| Alw26I | GTCTC | 5 cut(s) | 1275, 1358, 4606, 4690, 6247 |
| Alw44I | GTGCAC | 2 cut(s) | 284, 540 |
| Ama87I | CYCGRG | 1 cut(s) | 5990 |
| Aor13HI | TCCGGA | 1 cut(s) | 1402 |
| ApaLI | GTGCAC | 2 cut(s) | 284, 540 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 1574, 1606, 3373, 3405, 4393, 4425, 6330, 6362 |
| AseI | ATTAAT | 1 cut(s) | 2766 |
| AsiGI | ACCGGT | 2 cut(s) | 2534, 3094 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1398, 1770, 2642, 5082, 6679 |
| Asp718I | GGTACC | 4 cut(s) | 3042, 3091, 3492, 6720 |
| AspLEI | GCGC | 4 cut(s) | 3345, 3540, 3542, 6858 |
| AsuC2I | CCSGG | 2 cut(s) | 1996, 3286 |
| AsuII | TTCGAA | 1 cut(s) | 1617 |
| AvaI | CYCGRG | 1 cut(s) | 5990 |
| AxyI | CCTNAGG | 1 cut(s) | 4674 |
| BaeGI | GKGCMC | 3 cut(s) | 288, 415, 544 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2859, 2892 |
| BamHI | GGATCC | 2 cut(s) | 766, 4453 |
| BanI | GGYRCC | 6 cut(s) | 154, 410, 3042, 3091, 3492, 6720 |
| BanII | GRGCYC | 4 cut(s) | 19, 3557, 4054, 6198 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1246, 1278, 2835, 2867 |
| BbrPI | CACGTG | 2 cut(s) | 371, 4010 |
| BbsI | GAAGAC | 2 cut(s) | 3426, 6305 |
| Bbv12I | GWGCWC | 6 cut(s) | 19, 288, 544, 4054, 6090, 6198 |
| BceAI | ACGGC | 6 cut(s) | 55, 1864, 3659, 3897, 4864, 6904 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 1191, 1201, 1225, 1235, 6178, 6212, 6316, 6350 |
| BciVI | GTATCC | 1 cut(s) | 1137 |
| BcnI | CCSGG | 2 cut(s) | 1996, 3286 |
| BcoDI | GTCTC | 5 cut(s) | 1275, 1358, 4606, 4690, 6247 |
| BcuI | ACTAGT | 1 cut(s) | 2542 |
| BfmI | CTRYAG | 5 cut(s) | 1080, 1107, 4347, 6045, 6219 |
| BfrI | CTTAAG | 1 cut(s) | 5854 |
| BfuAI | ACCTGC | 2 cut(s) | 4540, 5695 |
| BfuI | GTATCC | 1 cut(s) | 1137 |
| BglII | AGATCT | 2 cut(s) | 1967, 4321 |
| BlpI | GCTNAGC | 1 cut(s) | 3702 |
| BmcAI | AGTACT | 1 cut(s) | 1105 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2567, 2908 |
| BmeT110I | CYCGRG | 1 cut(s) | 5990 |
| BmrI | ACTGGG | 1 cut(s) | 3079 |
| BmuI | ACTGGG | 1 cut(s) | 3079 |
| BpiI | GAAGAC | 2 cut(s) | 3426, 6305 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 317, 349, 4283, 4315 |
| BpmI | CTGGAG | 2 cut(s) | 2157, 6705 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2242 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3702 |
| Bpu14I | TTCGAA | 1 cut(s) | 1617 |
| BpuEI | CTTGAG | 3 cut(s) | 344, 5513, 6307 |
| BpuMI | CCSGG | 2 cut(s) | 1996, 3286 |
| Bsa29I | ATCGAT | 2 cut(s) | 1566, 4722 |
| BsaAI | YACGTR | 3 cut(s) | 371, 1946, 4010 |
| BsaHI | GRCGYC | 1 cut(s) | 3363 |
| BsaI | GGTCTC | 1 cut(s) | 6247 |
| BsaWI | WCCGGW | 4 cut(s) | 1402, 2534, 3094, 4557 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 87, 117, 430, 460, 1114, 1144, 3363, 3393 |
| Bse118I | RCCGGY | 5 cut(s) | 2170, 2534, 3094, 3646, 4591 |
| Bse21I | CCTNAGG | 1 cut(s) | 4674 |
| Bse3DI | GCAATG | 7 cut(s) | 1758, 2033, 2955, 5667, 6180, 6334, 6363 |
| BseAI | TCCGGA | 1 cut(s) | 1402 |
| BseCI | ATCGAT | 2 cut(s) | 1566, 4722 |
| BseMI | GCAATG | 7 cut(s) | 1758, 2033, 2955, 5667, 6180, 6334, 6363 |
| BsePI | GCGCGC | 1 cut(s) | 3538 |
| BseRI | GAGGAG | 8 cut(s) | 9, 108, 230, 1748, 2396, 4044, 4565, 4769 |
| BseSI | GKGCMC | 3 cut(s) | 288, 415, 544 |
| BseX3I | CGGCCG | 1 cut(s) | 3644 |
| BseYI | CCCAGC | 6 cut(s) | 459, 2280, 2332, 2806, 5982, 6034 |
| BsgI | GTGCAG | 1 cut(s) | 1251 |
| Bsh1236I | CGCG | 3 cut(s) | 3540, 3916, 6200 |
| Bsh1285I | CGRYCG | 2 cut(s) | 3258, 3647 |
| BshNI | GGYRCC | 6 cut(s) | 154, 410, 3042, 3091, 3492, 6720 |
| BshTI | ACCGGT | 2 cut(s) | 2534, 3094 |
| BshVI | ATCGAT | 2 cut(s) | 1566, 4722 |
| BsiEI | CGRYCG | 2 cut(s) | 3258, 3647 |
| BsiHKAI | GWGCWC | 6 cut(s) | 19, 288, 544, 4054, 6090, 6198 |
| BsiHKCI | CYCGRG | 1 cut(s) | 5990 |
| BslFI | GGGAC | 6 cut(s) | 2011, 3919, 4118, 4313, 4771, 5999 |
| BsmAI | GTCTC | 5 cut(s) | 1275, 1358, 4606, 4690, 6247 |
| BsmFI | GGGAC | 6 cut(s) | 2011, 3919, 4118, 4313, 4771, 5999 |
| BsmI | GAATGC | 2 cut(s) | 2243, 4886 |
| Bso31I | GGTCTC | 1 cut(s) | 6247 |
| BsoBI | CYCGRG | 1 cut(s) | 5990 |
| Bsp119I | TTCGAA | 1 cut(s) | 1617 |
| Bsp1286I | GDGCHC | 8 cut(s) | 19, 288, 415, 544, 3557, 4054, 6090, 6198 |
| Bsp13I | TCCGGA | 1 cut(s) | 1402 |
| Bsp1407I | TGTACA | 4 cut(s) | 867, 5440, 5516, 6756 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3702 |
| Bsp19I | CCATGG | 1 cut(s) | 3348 |
| Bsp68I | TCGCGA | 1 cut(s) | 6200 |
| BspDI | ATCGAT | 2 cut(s) | 1566, 4722 |
| BspEI | TCCGGA | 1 cut(s) | 1402 |
| BspFNI | CGCG | 3 cut(s) | 3540, 3916, 6200 |
| BspHI | TCATGA | 1 cut(s) | 6058 |
| BspMAI | CTGCAG | 2 cut(s) | 1111, 4351 |
| BspMI | ACCTGC | 2 cut(s) | 4540, 5695 |
| BspQI | GCTCTTC | 4 cut(s) | 1360, 5044, 5650, 6078 |
| BspT104I | TTCGAA | 1 cut(s) | 1617 |
| BspT107I | GGYRCC | 6 cut(s) | 154, 410, 3042, 3091, 3492, 6720 |
| BspTI | CTTAAG | 1 cut(s) | 5854 |
| BspTNI | GGTCTC | 1 cut(s) | 6247 |
| BsrBI | CCGCTC | 1 cut(s) | 6595 |
| BsrDI | GCAATG | 7 cut(s) | 1758, 2033, 2955, 5667, 6180, 6334, 6363 |
| BsrFI | RCCGGY | 5 cut(s) | 2170, 2534, 3094, 3646, 4591 |
| BsrGI | TGTACA | 4 cut(s) | 867, 5440, 5516, 6756 |
| BssAI | RCCGGY | 5 cut(s) | 2170, 2534, 3094, 3646, 4591 |
| BssHII | GCGCGC | 1 cut(s) | 3538 |
| BssNAI | GTATAC | 1 cut(s) | 964 |
| BssNI | GRCGYC | 1 cut(s) | 3363 |
| BssT1I | CCWWGG | 8 cut(s) | 825, 1708, 2668, 3225, 3348, 5691, 5921, 6588 |
| Bst1107I | GTATAC | 1 cut(s) | 964 |
| Bst6I | CTCTTC | 9 cut(s) | 514, 599, 1107, 1360, 3226, 5044, 5388, 5650, 6078 |
| BstACI | GRCGYC | 1 cut(s) | 3363 |
| BstAFI | CTTAAG | 1 cut(s) | 5854 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2563, 3814, 5009 |
| BstAUI | TGTACA | 4 cut(s) | 867, 5440, 5516, 6756 |
| BstBAI | YACGTR | 3 cut(s) | 371, 1946, 4010 |
| BstBI | TTCGAA | 1 cut(s) | 1617 |
| BstDSI | CCRYGG | 2 cut(s) | 3348, 6797 |
| BstEII | GGTNACC | 1 cut(s) | 2288 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2701 |
| BstFNI | CGCG | 3 cut(s) | 3540, 3916, 6200 |
| BstHHI | GCGC | 4 cut(s) | 3345, 3540, 3542, 6858 |
| BstMAI | GTCTC | 5 cut(s) | 1275, 1358, 4606, 4690, 6247 |
| BstMCI | CGRYCG | 2 cut(s) | 3258, 3647 |
| BstPI | GGTNACC | 1 cut(s) | 2288 |
| BstSFI | CTRYAG | 5 cut(s) | 1080, 1107, 4347, 6045, 6219 |
| BstSLI | GKGCMC | 3 cut(s) | 288, 415, 544 |
| BstUI | CGCG | 3 cut(s) | 3540, 3916, 6200 |
| BstV2I | GAAGAC | 2 cut(s) | 3426, 6305 |
| BstX2I | RGATCY | 5 cut(s) | 327, 766, 1967, 4321, 4453 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 407 |
| BstYI | RGATCY | 5 cut(s) | 327, 766, 1967, 4321, 4453 |
| BstZ17I | GTATAC | 1 cut(s) | 964 |
| BstZI | CGGCCG | 1 cut(s) | 3644 |
| Bsu15I | ATCGAT | 2 cut(s) | 1566, 4722 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4674 |
| BsuI | GTATCC | 1 cut(s) | 1137 |
| BsuTUI | ATCGAT | 2 cut(s) | 1566, 4722 |
| BtgI | CCRYGG | 2 cut(s) | 3348, 6797 |
| BtsI | GCAGTG | 2 cut(s) | 105, 4017 |
| BtuMI | TCGCGA | 1 cut(s) | 6200 |
| BveI | ACCTGC | 2 cut(s) | 4540, 5695 |
| CciI | TCATGA | 1 cut(s) | 6058 |
| CfoI | GCGC | 4 cut(s) | 3345, 3540, 3542, 6858 |
| Cfr10I | RCCGGY | 5 cut(s) | 2170, 2534, 3094, 3646, 4591 |
| ClaI | ATCGAT | 2 cut(s) | 1566, 4722 |
| CseI | GACGC | 3 cut(s) | 3284, 3371, 6614 |
| CsiI | ACCWGGT | 1 cut(s) | 6650 |
| CspAI | ACCGGT | 2 cut(s) | 2534, 3094 |
| DraI | TTTAAA | 3 cut(s) | 382, 1819, 4381 |
| DraIII | CACNNNGTG | 2 cut(s) | 2188, 6094 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2617 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2567, 2908 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2617 |
| EaeI | YGGCCR | 2 cut(s) | 3644, 3648 |
| EagI | CGGCCG | 1 cut(s) | 3644 |
| Eam1104I | CTCTTC | 9 cut(s) | 514, 599, 1107, 1360, 3226, 5044, 5388, 5650, 6078 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2567, 2908 |
| EarI | CTCTTC | 9 cut(s) | 514, 599, 1107, 1360, 3226, 5044, 5388, 5650, 6078 |
| EciI | GGCGGA | 4 cut(s) | 34, 191, 1440, 3315 |
| Ecl136II | GAGCTC | 3 cut(s) | 17, 4052, 6196 |
| EclXI | CGGCCG | 1 cut(s) | 3644 |
| Eco130I | CCWWGG | 8 cut(s) | 825, 1708, 2668, 3225, 3348, 5691, 5921, 6588 |
| Eco147I | AGGCCT | 4 cut(s) | 921, 2224, 3295, 5926 |
| Eco24I | GRGCYC | 4 cut(s) | 19, 3557, 4054, 6198 |
| Eco31I | GGTCTC | 1 cut(s) | 6247 |
| Eco32I | GATATC | 6 cut(s) | 210, 1024, 1464, 3007, 4372, 4720 |
| Eco52I | CGGCCG | 1 cut(s) | 3644 |
| Eco53kI | GAGCTC | 3 cut(s) | 17, 4052, 6196 |
| Eco57I | CTGAAG | 7 cut(s) | 623, 1038, 1874, 2862, 3906, 3947, 6696 |
| Eco72I | CACGTG | 2 cut(s) | 371, 4010 |
| Eco81I | CCTNAGG | 1 cut(s) | 4674 |
| Eco88I | CYCGRG | 1 cut(s) | 5990 |
| Eco91I | GGTNACC | 1 cut(s) | 2288 |
| EcoICRI | GAGCTC | 3 cut(s) | 17, 4052, 6196 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2701 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1258, 3126, 5986, 6648 |
| EcoO65I | GGTNACC | 1 cut(s) | 2288 |
| EcoRI | GAATTC | 3 cut(s) | 1228, 2576, 4912 |
| EcoRV | GATATC | 6 cut(s) | 210, 1024, 1464, 3007, 4372, 4720 |
| EcoT14I | CCWWGG | 8 cut(s) | 825, 1708, 2668, 3225, 3348, 5691, 5921, 6588 |
| EcoT22I | ATGCAT | 2 cut(s) | 3810, 5766 |
| EcoT38I | GRGCYC | 4 cut(s) | 19, 3557, 4054, 6198 |
| ErhI | CCWWGG | 8 cut(s) | 825, 1708, 2668, 3225, 3348, 5691, 5921, 6588 |
| FaqI | GGGAC | 6 cut(s) | 2011, 3919, 4118, 4313, 4771, 5999 |
| FauI | CCCGC | 1 cut(s) | 6588 |
| FauNDI | CATATG | 2 cut(s) | 4366, 5886 |
| FblI | GTMKAC | 4 cut(s) | 963, 3360, 5390, 6222 |
| FriOI | GRGCYC | 4 cut(s) | 19, 3557, 4054, 6198 |
| FseI | GGCCGGCC | 1 cut(s) | 3650 |
| GlaI | GCGC | 4 cut(s) | 3344, 3539, 3541, 6857 |
| GsaI | CCCAGC | 6 cut(s) | 463, 2284, 2336, 2810, 5986, 6038 |
| GsuI | CTGGAG | 2 cut(s) | 2157, 6705 |
| HgaI | GACGC | 3 cut(s) | 3284, 3371, 6614 |
| HhaI | GCGC | 4 cut(s) | 3345, 3540, 3542, 6858 |
| Hin1I | GRCGYC | 1 cut(s) | 3363 |
| Hin6I | GCGC | 4 cut(s) | 3343, 3538, 3540, 6856 |
| HinP1I | GCGC | 4 cut(s) | 3343, 3538, 3540, 6856 |
| HincII | GTYRAC | 2 cut(s) | 1685, 3361 |
| HindII | GTYRAC | 2 cut(s) | 1685, 3361 |
| HindIII | AAGCTT | 4 cut(s) | 320, 2639, 3759, 6708 |
| Hpy99I | CGWCG | 4 cut(s) | 1213, 3278, 3365, 3569 |
| HpyCH4IV | ACGT | 5 cut(s) | 370, 1945, 3354, 4009, 6775 |
| HpySE526I | ACGT | 5 cut(s) | 370, 1945, 3354, 4009, 6775 |
| Hsp92I | GRCGYC | 1 cut(s) | 3363 |
| HspAI | GCGC | 4 cut(s) | 3343, 3538, 3540, 6856 |
| KflI | GGGWCCC | 1 cut(s) | 5986 |
| Kpn2I | TCCGGA | 1 cut(s) | 1402 |
| KpnI | GGTACC | 4 cut(s) | 3046, 3095, 3496, 6724 |
| KroI | GCCGGC | 3 cut(s) | 2170, 3646, 4591 |
| KroNI | GCCGGC | 3 cut(s) | 2172, 3648, 4593 |
| LguI | GCTCTTC | 4 cut(s) | 1360, 5044, 5650, 6078 |
| MabI | ACCWGGT | 1 cut(s) | 6650 |
| MaeII | ACGT | 5 cut(s) | 370, 1945, 3354, 4009, 6775 |
| MbiI | CCGCTC | 1 cut(s) | 6595 |
| MfeI | CAATTG | 3 cut(s) | 4901, 6069, 6213 |
| MflI | RGATCY | 5 cut(s) | 327, 766, 1967, 4321, 4453 |
| MhlI | GDGCHC | 8 cut(s) | 19, 288, 415, 544, 3557, 4054, 6090, 6198 |
| MmeI | TCCRAC | 6 cut(s) | 1595, 2671, 5282, 5595, 6040, 6495 |
| Mph1103I | ATGCAT | 2 cut(s) | 3810, 5766 |
| MroI | TCCGGA | 1 cut(s) | 1402 |
| MroNI | GCCGGC | 3 cut(s) | 2170, 3646, 4591 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1398, 1770, 2642, 5082, 6679 |
| MslI | CAYNNNNRTG | 7 cut(s) | 535, 2232, 2511, 3037, 3567, 5838, 5934 |
| MspA1I | CMGCKG | 8 cut(s) | 459, 1762, 2305, 3770, 5153, 5438, 6248, 6381 |
| MspCI | CTTAAG | 1 cut(s) | 5854 |
| MunI | CAATTG | 3 cut(s) | 4901, 6069, 6213 |
| Mva1269I | GAATGC | 2 cut(s) | 2243, 4886 |
| MvnI | CGCG | 3 cut(s) | 3540, 3916, 6200 |
| NaeI | GCCGGC | 3 cut(s) | 2172, 3648, 4593 |
| NciI | CCSGG | 2 cut(s) | 1996, 3286 |
| NcoI | CCATGG | 1 cut(s) | 3348 |
| NdeI | CATATG | 2 cut(s) | 4366, 5886 |
| NgoMIV | GCCGGC | 3 cut(s) | 2170, 3646, 4591 |
| NmeAIII | GCCGAG | 2 cut(s) | 3576, 6832 |
| NruI | TCGCGA | 1 cut(s) | 6200 |
| NsiI | ATGCAT | 2 cut(s) | 3810, 5766 |
| NspV | TTCGAA | 1 cut(s) | 1617 |
| OliI | CACNNNNGTG | 2 cut(s) | 3567, 5838 |
| PaeI | GCATGC | 1 cut(s) | 879 |
| PagI | TCATGA | 1 cut(s) | 6058 |
| PaqCI | CACCTGC | 1 cut(s) | 5695 |
| PasI | CCCWGGG | 1 cut(s) | 3212 |
| PauI | GCGCGC | 1 cut(s) | 3538 |
| PceI | AGGCCT | 4 cut(s) | 921, 2224, 3295, 5926 |
| PciI | ACATGT | 1 cut(s) | 864 |
| PciSI | GCTCTTC | 4 cut(s) | 1360, 5044, 5650, 6078 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1003 |
| PctI | GAATGC | 2 cut(s) | 2243, 4886 |
| PdiI | GCCGGC | 3 cut(s) | 2172, 3648, 4593 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1398, 1770, 2642, 5082, 6679 |
| PflFI | GACNNNGTC | 2 cut(s) | 3278, 3356 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2188, 6022, 6236 |
| PinAI | ACCGGT | 2 cut(s) | 2534, 3094 |
| PmaCI | CACGTG | 2 cut(s) | 371, 4010 |
| PmlI | CACGTG | 2 cut(s) | 371, 4010 |
| Ppu21I | YACGTR | 3 cut(s) | 371, 1946, 4010 |
| PpuMI | RGGWCCY | 2 cut(s) | 5986, 6648 |
| PscI | ACATGT | 1 cut(s) | 864 |
| PshBI | ATTAAT | 1 cut(s) | 2766 |
| PsiI | TTATAA | 5 cut(s) | 426, 756, 1863, 4263, 5553 |
| Psp124BI | GAGCTC | 3 cut(s) | 19, 4054, 6198 |
| Psp5II | RGGWCCY | 2 cut(s) | 5986, 6648 |
| PspCI | CACGTG | 2 cut(s) | 371, 4010 |
| PspEI | GGTNACC | 1 cut(s) | 2288 |
| PspFI | CCCAGC | 6 cut(s) | 459, 2280, 2332, 2806, 5982, 6034 |
| PspPPI | RGGWCCY | 2 cut(s) | 5986, 6648 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4620, 4652 |
| PstI | CTGCAG | 2 cut(s) | 1111, 4351 |
| PsuI | RGATCY | 5 cut(s) | 327, 766, 1967, 4321, 4453 |
| PsyI | GACNNNGTC | 2 cut(s) | 3278, 3356 |
| PteI | GCGCGC | 1 cut(s) | 3538 |
| PvuII | CAGCTG | 5 cut(s) | 1762, 5153, 5438, 6248, 6381 |
| RigI | GGCCGGCC | 1 cut(s) | 3650 |
| RruI | TCGCGA | 1 cut(s) | 6200 |
| RseI | CAYNNNNRTG | 7 cut(s) | 535, 2232, 2511, 3037, 3567, 5838, 5934 |
| SacI | GAGCTC | 3 cut(s) | 19, 4054, 6198 |
| SalI | GTCGAC | 1 cut(s) | 3359 |
| SapI | GCTCTTC | 4 cut(s) | 1360, 5044, 5650, 6078 |
| SbfI | CCTGCAGG | 1 cut(s) | 4351 |
| ScaI | AGTACT | 1 cut(s) | 1105 |
| SdaI | CCTGCAGG | 1 cut(s) | 4351 |
| SduI | GDGCHC | 8 cut(s) | 19, 288, 415, 544, 3557, 4054, 6090, 6198 |
| SexAI | ACCWGGT | 1 cut(s) | 6650 |
| SfcI | CTRYAG | 5 cut(s) | 1080, 1107, 4347, 6045, 6219 |
| SfuI | TTCGAA | 1 cut(s) | 1617 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 535, 2232, 2511, 3037, 3567, 5838, 5934 |
| SmlI | CTYRAG | 4 cut(s) | 323, 5528, 5854, 6322 |
| SmoI | CTYRAG | 4 cut(s) | 323, 5528, 5854, 6322 |
| SpeI | ACTAGT | 1 cut(s) | 2542 |
| SphI | GCATGC | 1 cut(s) | 879 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 4351 |
| SseBI | AGGCCT | 4 cut(s) | 921, 2224, 3295, 5926 |
| SspI | AATATT | 2 cut(s) | 1436, 6549 |
| SstI | GAGCTC | 3 cut(s) | 19, 4054, 6198 |
| StuI | AGGCCT | 4 cut(s) | 921, 2224, 3295, 5926 |
| StyI | CCWWGG | 8 cut(s) | 825, 1708, 2668, 3225, 3348, 5691, 5921, 6588 |
| TaiI | ACGT | 5 cut(s) | 373, 1948, 3357, 4012, 6778 |
| TaqII | GACCGA | 2 cut(s) | 3148, 6317 |
| TatI | WGTACW | 6 cut(s) | 867, 1103, 2539, 5440, 5516, 6756 |
| TauI | GCSGC | 2 cut(s) | 50, 2557 |
| TspGWI | ACGGA | 3 cut(s) | 1464, 4645, 6174 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3278, 3356 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2188, 6022, 6236 |
| Vha464I | CTTAAG | 1 cut(s) | 5854 |
| VneI | GTGCAC | 2 cut(s) | 284, 540 |
| VspI | ATTAAT | 1 cut(s) | 2766 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2701 |
| XbaI | TCTAGA | 3 cut(s) | 1984, 5674, 6868 |
| XmiI | GTMKAC | 4 cut(s) | 963, 3360, 5390, 6222 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1398, 1770, 2642, 5082, 6679 |
| ZrmI | AGTACT | 1 cut(s) | 1105 |
| Zsp2I | ATGCAT | 2 cut(s) | 3810, 5766 |