Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008040

Physical Location & Seq

Genomic Coordinates Reverse (-)

87796172 .. 87801447

Gene Structure 5276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00066260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGGCTTGGATTCAGCCAAGGACTGAACCAATCTACTTGGCAGGAATTTTTGCTTTGAAATATTTTGAAAATTTATACCTACGGATCCCCCAATTTCCCCAAACCCCTCAAAACCATGTTCAGCTCAACCCAGCACCCCCTTCTCCCTCCGACGCCGCCTCGTCGCCGCTTCTCAGCAACTCCCTCGCCGACAACCTCCTCCGCAGCCGCCGCCTCATCCGCCAGCCGCCGCGCCCTCTCCGCGGCGCCGCCCGCTTCCTCCGCCGCGCCAGCGGCCGCCGCATGAGGCTTCGAGAGCCTTCGGTCCGGGTTCGCGAGTCCGCGGCGGAGCAGCTGGAGGAGCGCCAGAGTGATTGGGCCTACTCCCGGCCCATTGTGGTGCTGGACCTGCTGTGGAACGCCGTGCTGCTCGGGATTGGGCTCGCCGTGCTTTGGTTTAGCTATGAGGAAAGCCCTGAGGTTCCTCTGAGGGTGTGGATTGGCGGCTACGCGCTGCAGTGCGCGGTGCATATGTTCTGTGTGGGCGTCGAGTGCACGCGGCGGCGGCACGTGGGGGAGGGGGAGGTGGGGCAGGTGGCCGTGGAGGAAGGGAGTCCTCAGTGGGAGAGCTCTTCTGGTTCTGGGAGTGATGAGAGTGAAGATTATGGAATGGAGCAGAGCTTGGAATATAGTGCCACAAGTTTCGCAAAGAATTTGGAGTCTGCAAACACGATGTTTTCGTTTATCTGGTGGATTCTTGGGTTCTACTGGGTGACTGCTGGCGGTGAAAGTTTGACGACTGACTCTCCTCAATTATACTGGTTTGAAGGAGCAACTAAGGAAGAGATCGATCATTTACCAAAGTACAAGTTCCGCAAGATATCTGATTTTGAGAAAGTTAATGGTGAAATCCAAGACTCTTTTGGAGGAATAATGACCGAATGTGACACTGATGCACCAACGGAACATGCTCTCTCCCAAGAGGATGCTGAATGCTGCATCTGCCTTTGTGCCTATGATGATGGAACCGAACTGCGTGAGCTTCCTTGCCGTCATCATTTTCACTGCACCTGCATAGATAAATGGTTACAGATCAATGCCACCTGCCCGCTCTGCAAGTTCAACATTCTGAAGTCTGCTAGCCAGAGTAGCAGTGAAGAGAGTACATTTCCTCCCTGTATGTATATGATATATATAGTGGATCATGAACAAGATTCTGAAGAACCTGGGATCCATTTTGCTGGATGCATCGTCAGGGTAGGCTTTGTTGCCAAATGGCGGGTGAAACTGCGTGTCATAGGAGGTCTCTCCGACGGCAACATATCGAGAAAAGGCTGTGCCATTGGTAATTATGCTACTCGTCATCGAGTTATCTTTACGTTGTGTTACGCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

458

Amino Acids

51.76

Weight (kDa)

5.5

Isoelectric Point (pI)

68.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	324 - 366	1.3e-13	Ring finger domain
zf-RING_11	PF17123	324 - 352	4e-07	RING-like zinc finger
zf-rbx1	PF12678	324 - 366	1.7e-06	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61180
fragaria_vesca	FvH4_3g08230
malus_domestica	MD01G1049700.v1.1 MD05G1306100.v1.1 MD07G1126700.v1.1 MD07G1126800.v1.1 MD10G1285100.v1.1
prunus_persica	Prupe.2G157200_v2.0.a1 Prupe.4G056500_v2.0.a1
pyrus_communis	pycom01g07470 pycom05g28320 pycom07g12230 pycom07g12310 pycom10g23820
rosa_chinensis	RchiOBHm_Chr5g0009921
rosa_laevigata	RLG00000031710
rosa_multiflora	Rmu_sc0001709.1_g000014
rosa_roxburghii	Rroxscaffold_1G00066260
rosa_rugosa	Rorug04G0446900
rosa_samantha	Rh5AG078500 Rh5BG073400 Rh5CG085800 Rh5DG073900
rosa_wichuraiana	Rw5G007220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	562, 1058, 1091
Acc36I	ACCTGC	4 cut(s)	396, 562, 1058, 1091
AccB1I	GGYRCC	1 cut(s)	245
AccBSI	CCGCTC	1 cut(s)	1090
AccII	CGCG	8 cut(s)	232, 243, 267, 315, 323, 491, 503, 538
AclWI	GGATC	5 cut(s)	79, 92, 1188, 1204, 1217
AcoI	YGGCCR	2 cut(s)	274, 576
AcsI	RAATTY	3 cut(s)	45, 70, 691
AcuI	CTGAAG	2 cut(s)	1130, 1218
AcvI	CACGTG	1 cut(s)	550
AcyI	GRCGYC	3 cut(s)	153, 246, 525
AfaI	GTAC	2 cut(s)	845, 1144
AfiI	CCNNNNNNNGG	4 cut(s)	242, 366, 432, 1257
AgsI	TTSAA	4 cut(s)	58, 68, 806, 1102
AjnI	CCWGG	1 cut(s)	1204
AloI	GAACNNNNNNTCC	2 cut(s)	1194, 1226
AluBI	AGCT	6 cut(s)	124, 334, 441, 609, 660, 1021
AluI	AGCT	6 cut(s)	124, 334, 441, 609, 660, 1021
Alw21I	GWGCWC	2 cut(s)	536, 611
Alw26I	GTCTC	1 cut(s)	1289
Alw44I	GTGCAC	1 cut(s)	532
AlwI	GGATC	5 cut(s)	79, 92, 1188, 1204, 1217
Ama87I	CYCGRG	1 cut(s)	410
AoxI	GGCC	4 cut(s)	274, 357, 368, 576
ApaLI	GTGCAC	1 cut(s)	532
ApeKI	GCWGC	5 cut(s)	204, 331, 406, 493, 975
ApoI	RAATTY	3 cut(s)	45, 70, 691
AspLEI	GCGC	6 cut(s)	234, 248, 269, 345, 493, 503
AspS9I	GGNCC	4 cut(s)	304, 357, 369, 385
AsuC2I	CCSGG	2 cut(s)	308, 367
AsuHPI	GGTGA	4 cut(s)	763, 776, 896, 1273
AsuNHI	GCTAGC	1 cut(s)	1118
AvaI	CYCGRG	1 cut(s)	410
AvaII	GGWCC	2 cut(s)	304, 385
AxyI	CCTNAGG	1 cut(s)	456
BaeGI	GKGCMC	1 cut(s)	536
BamHI	GGATCC	2 cut(s)	84, 1209
BanI	GGYRCC	1 cut(s)	245
BanII	GRGCYC	2 cut(s)	423, 611
BbrPI	CACGTG	1 cut(s)	550
Bbv12I	GWGCWC	2 cut(s)	536, 611
BbvI	GCAGC	5 cut(s)	216, 343, 393, 480, 962
BccI	CCATC	1 cut(s)	995
BceAI	ACGGC	5 cut(s)	386, 410, 563, 1014, 1309
BcgI	CGANNNNNNTGC	2 cut(s)	166, 200
BciT130I	CCWGG	1 cut(s)	1206
BcnI	CCSGG	2 cut(s)	308, 367
BcoDI	GTCTC	1 cut(s)	1289
BfaI	CTAG	1 cut(s)	1119
BfmI	CTRYAG	1 cut(s)	494
BfoI	RGCGCY	2 cut(s)	249, 346
BfuAI	ACCTGC	4 cut(s)	396, 562, 1058, 1091
Bme1390I	CCNGG	3 cut(s)	308, 367, 1206
Bme18I	GGWCC	2 cut(s)	304, 385
BmeT110I	CYCGRG	1 cut(s)	410
BmgT120I	GGNCC	4 cut(s)	304, 357, 369, 385
BmiI	GGNNCC	5 cut(s)	86, 247, 462, 1006, 1211
BmrFI	CCNGG	3 cut(s)	308, 367, 1206
BmrI	ACTGGG	1 cut(s)	757
BmsI	GCATC	5 cut(s)	922, 955, 987, 1214, 1236
BmtI	GCTAGC	1 cut(s)	1122
BmuI	ACTGGG	1 cut(s)	757
BpmI	CTGGAG	1 cut(s)	356
BpuMI	CCSGG	2 cut(s)	308, 367
Bsa29I	ATCGAT	1 cut(s)	828
BsaAI	YACGTR	1 cut(s)	550
BsaHI	GRCGYC	3 cut(s)	153, 246, 525
BsaI	GGTCTC	1 cut(s)	1289
BsaJI	CCNNGG	5 cut(s)	17, 241, 321, 579, 1205
BsaXI	ACNNNNNCTCC	4 cut(s)	769, 799, 1135, 1165
Bsc4I	CCNNNNNNNGG	4 cut(s)	242, 366, 432, 1257
Bse1I	ACTGG	2 cut(s)	752, 803
Bse21I	CCTNAGG	1 cut(s)	456
Bse3DI	GCAATG	1 cut(s)	1377
BseBI	CCWGG	1 cut(s)	1206
BseCI	ATCGAT	1 cut(s)	828
BseDI	CCNNGG	5 cut(s)	17, 241, 321, 579, 1205
BseGI	GGATG	3 cut(s)	216, 970, 1229
BseLI	CCNNNNNNNGG	4 cut(s)	242, 366, 432, 1257
BseMI	GCAATG	1 cut(s)	1377
BseMII	CTCAG	4 cut(s)	187, 447, 458, 611
BseNI	ACTGG	2 cut(s)	752, 803
BseRI	GAGGAG	3 cut(s)	188, 353, 777
BseSI	GKGCMC	1 cut(s)	536
BseX3I	CGGCCG	1 cut(s)	274
BseXI	GCAGC	5 cut(s)	216, 343, 393, 480, 962
BseYI	CCCAGC	1 cut(s)	130
BsgI	GTGCAG	1 cut(s)	1030
Bsh1236I	CGCG	8 cut(s)	232, 243, 267, 315, 323, 491, 503, 538
Bsh1285I	CGRYCG	1 cut(s)	277
BshFI	GGCC	4 cut(s)	276, 359, 370, 578
BshNI	GGYRCC	1 cut(s)	245
BshVI	ATCGAT	1 cut(s)	828
BsiEI	CGRYCG	1 cut(s)	277
BsiHKAI	GWGCWC	2 cut(s)	536, 611
BsiHKCI	CYCGRG	1 cut(s)	410
BsiSI	CCGG	2 cut(s)	307, 367
BslI	CCNNNNNNNGG	4 cut(s)	242, 366, 432, 1257
BsmAI	GTCTC	1 cut(s)	1289
BsmI	GAATGC	1 cut(s)	977
BsnI	GGCC	4 cut(s)	276, 359, 370, 578
Bso31I	GGTCTC	1 cut(s)	1289
BsoBI	CYCGRG	1 cut(s)	410
Bsp1286I	GDGCHC	3 cut(s)	423, 536, 611
Bsp143I	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
Bsp68I	TCGCGA	1 cut(s)	315
BspANI	GGCC	4 cut(s)	276, 359, 370, 578
BspCNI	CTCAG	4 cut(s)	186, 448, 459, 610
BspDI	ATCGAT	1 cut(s)	828
BspFNI	CGCG	8 cut(s)	232, 243, 267, 315, 323, 491, 503, 538
BspHI	TCATGA	1 cut(s)	1183
BspLI	GGNNCC	5 cut(s)	86, 247, 462, 1006, 1211
BspMAI	CTGCAG	1 cut(s)	498
BspMI	ACCTGC	4 cut(s)	396, 562, 1058, 1091
BspOI	GCTAGC	1 cut(s)	1122
BspPI	GGATC	5 cut(s)	79, 92, 1188, 1204, 1217
BspQI	GCTCTTC	1 cut(s)	616
BspT107I	GGYRCC	1 cut(s)	245
BspTNI	GGTCTC	1 cut(s)	1289
BsrBI	CCGCTC	1 cut(s)	1090
BsrDI	GCAATG	1 cut(s)	1377
BsrI	ACTGG	2 cut(s)	752, 803
BssECI	CCNNGG	5 cut(s)	17, 241, 321, 579, 1205
BssMI	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
BssNI	GRCGYC	3 cut(s)	153, 246, 525
BssT1I	CCWWGG	1 cut(s)	17
Bst2UI	CCWGG	1 cut(s)	1206
Bst6I	CTCTTC	3 cut(s)	616, 816, 1131
BstACI	GRCGYC	3 cut(s)	153, 246, 525
BstBAI	YACGTR	1 cut(s)	550
BstC8I	GCNNGC	8 cut(s)	224, 253, 271, 423, 536, 760, 1088, 1120
BstDEI	CTNAG	5 cut(s)	173, 456, 467, 597, 816
BstDSI	CCRYGG	3 cut(s)	241, 321, 579
BstF5I	GGATG	3 cut(s)	216, 970, 1229
BstFNI	CGCG	8 cut(s)	232, 243, 267, 315, 323, 491, 503, 538
BstH2I	RGCGCY	2 cut(s)	249, 346
BstHHI	GCGC	6 cut(s)	234, 248, 269, 345, 493, 503
BstKTI	GATC	6 cut(s)	87, 828, 832, 1074, 1183, 1212
BstMAI	GTCTC	1 cut(s)	1289
BstMBI	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
BstMCI	CGRYCG	1 cut(s)	277
BstNI	CCWGG	1 cut(s)	1206
BstNSI	RCATGY	1 cut(s)	950
BstSCI	CCNGG	3 cut(s)	306, 365, 1204
BstSFI	CTRYAG	1 cut(s)	494
BstSLI	GKGCMC	1 cut(s)	536
BstUI	CGCG	8 cut(s)	232, 243, 267, 315, 323, 491, 503, 538
BstV1I	GCAGC	5 cut(s)	216, 343, 393, 480, 962
BstX2I	RGATCY	2 cut(s)	84, 1209
BstXI	CCANNNNNNTGG	1 cut(s)	1220
BstYI	RGATCY	2 cut(s)	84, 1209
BstZI	CGGCCG	1 cut(s)	274
Bsu15I	ATCGAT	1 cut(s)	828
Bsu36I	CCTNAGG	1 cut(s)	456
BsuRI	GGCC	4 cut(s)	276, 359, 370, 578
BsuTUI	ATCGAT	1 cut(s)	828
BtgI	CCRYGG	3 cut(s)	241, 321, 579
BtsCI	GGATG	3 cut(s)	216, 970, 1229
BtsI	GCAGTG	3 cut(s)	503, 1042, 1138
BtsIMutI	CAGTG	5 cut(s)	503, 605, 927, 1042, 1138
BtuMI	TCGCGA	1 cut(s)	315
BveI	ACCTGC	4 cut(s)	396, 562, 1058, 1091
Cac8I	GCNNGC	8 cut(s)	224, 253, 271, 423, 536, 760, 1088, 1120
CciI	TCATGA	1 cut(s)	1183
CciNI	GCGGCCGC	1 cut(s)	274
CfoI	GCGC	6 cut(s)	234, 248, 269, 345, 493, 503
Cfr13I	GGNCC	4 cut(s)	304, 357, 369, 385
Cfr42I	CCGCGG	2 cut(s)	244, 324
ClaI	ATCGAT	1 cut(s)	828
CpoI	CGGWCCG	1 cut(s)	304
CseI	GACGC	2 cut(s)	161, 514
Csp6I	GTAC	2 cut(s)	844, 1143
CspI	CGGWCCG	1 cut(s)	304
CviAII	CATG	4 cut(s)	116, 283, 947, 1184
CviQI	GTAC	2 cut(s)	844, 1143
DdeI	CTNAG	5 cut(s)	173, 456, 467, 597, 816
DinI	GGCGCC	1 cut(s)	247
DpnI	GATC	6 cut(s)	86, 827, 831, 1073, 1182, 1211
DpnII	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
EaeI	YGGCCR	2 cut(s)	274, 576
EagI	CGGCCG	1 cut(s)	274
Eam1104I	CTCTTC	3 cut(s)	616, 816, 1131
EarI	CTCTTC	3 cut(s)	616, 816, 1131
EciI	GGCGGA	3 cut(s)	209, 251, 341
Ecl136II	GAGCTC	1 cut(s)	609
EclXI	CGGCCG	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	17
Eco24I	GRGCYC	2 cut(s)	423, 611
Eco31I	GGTCTC	1 cut(s)	1289
Eco32I	GATATC	1 cut(s)	861
Eco47I	GGWCC	2 cut(s)	304, 385
Eco52I	CGGCCG	1 cut(s)	274
Eco53kI	GAGCTC	1 cut(s)	609
Eco57I	CTGAAG	2 cut(s)	1130, 1218
Eco72I	CACGTG	1 cut(s)	550
Eco81I	CCTNAGG	1 cut(s)	456
Eco88I	CYCGRG	1 cut(s)	410
EcoICRI	GAGCTC	1 cut(s)	609
EcoRII	CCWGG	1 cut(s)	1204
EcoRV	GATATC	1 cut(s)	861
EcoT14I	CCWWGG	1 cut(s)	17
EcoT22I	ATGCAT	1 cut(s)	1229
EcoT38I	GRGCYC	2 cut(s)	423, 611
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	1 cut(s)	17
FaeI	CATG	4 cut(s)	119, 286, 950, 1187
FatI	CATG	4 cut(s)	115, 282, 946, 1183
FauI	CCCGC	3 cut(s)	260, 1095, 1251
FauNDI	CATATG	1 cut(s)	510
FokI	GGATG	3 cut(s)	203, 977, 1236
FriOI	GRGCYC	2 cut(s)	423, 611
FspBI	CTAG	1 cut(s)	1119
GlaI	GCGC	6 cut(s)	233, 247, 268, 344, 492, 502
GsaI	CCCAGC	1 cut(s)	134
GsuI	CTGGAG	1 cut(s)	356
HaeII	RGCGCY	2 cut(s)	249, 346
HaeIII	GGCC	4 cut(s)	276, 359, 370, 578
HapII	CCGG	2 cut(s)	307, 367
HgaI	GACGC	2 cut(s)	161, 514
HhaI	GCGC	6 cut(s)	234, 248, 269, 345, 493, 503
Hin1I	GRCGYC	3 cut(s)	153, 246, 525
Hin1II	CATG	4 cut(s)	119, 286, 950, 1187
Hin6I	GCGC	6 cut(s)	232, 246, 267, 343, 491, 501
HinP1I	GCGC	6 cut(s)	232, 246, 267, 343, 491, 501
HinfI	GANTC	8 cut(s)	10, 317, 592, 698, 733, 782, 896, 1193
HpaII	CCGG	2 cut(s)	307, 367
HphI	GGTGA	4 cut(s)	763, 776, 896, 1273
Hpy166II	GTNNAC	1 cut(s)	534
Hpy188I	TCNGA	6 cut(s)	151, 468, 865, 1110, 1198, 1291
Hpy188III	TCNNGA	5 cut(s)	293, 314, 412, 1184, 1305
Hpy8I	GTNNAC	1 cut(s)	534
Hpy99I	CGWCG	4 cut(s)	155, 166, 530, 1295
HpyAV	CCTTC	4 cut(s)	150, 309, 581, 800
HpyCH4IV	ACGT	2 cut(s)	549, 1358
HpyF3I	CTNAG	5 cut(s)	173, 456, 467, 597, 816
HpySE526I	ACGT	2 cut(s)	549, 1358
Hsp92I	GRCGYC	3 cut(s)	153, 246, 525
Hsp92II	CATG	4 cut(s)	119, 286, 950, 1187
HspAI	GCGC	6 cut(s)	232, 246, 267, 343, 491, 501
KasI	GGCGCC	1 cut(s)	245
KspI	CCGCGG	2 cut(s)	244, 324
Kzo9I	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
LguI	GCTCTTC	1 cut(s)	616
LmnI	GCTCC	4 cut(s)	328, 340, 652, 809
Lsp1109I	GCAGC	5 cut(s)	216, 343, 393, 480, 962
LweI	GCATC	5 cut(s)	922, 955, 987, 1214, 1236
MaeI	CTAG	1 cut(s)	1119
MaeII	ACGT	2 cut(s)	549, 1358
MaeIII	GTNAC	4 cut(s)	751, 923, 1065, 1364
MalI	GATC	6 cut(s)	86, 827, 831, 1073, 1182, 1211
MbiI	CCGCTC	1 cut(s)	1090
MboI	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
MboII	GAAGA	5 cut(s)	603, 650, 833, 1148, 1211
MflI	RGATCY	2 cut(s)	84, 1209
MhlI	GDGCHC	3 cut(s)	423, 536, 611
MluCI	AATT	6 cut(s)	45, 70, 92, 691, 791, 1327
Mly113I	GGCGCC	1 cut(s)	246
MlyI	GAGTC	5 cut(s)	326, 601, 707, 776, 890
MmeI	TCCRAC	2 cut(s)	174, 1314
Mph1103I	ATGCAT	1 cut(s)	1229
MseI	TTAA	1 cut(s)	879
MslI	CAYNNNNRTG	1 cut(s)	377
MspA1I	CMGCKG	4 cut(s)	243, 273, 323, 334
MspI	CCGG	2 cut(s)	307, 367
MspR9I	CCNGG	3 cut(s)	308, 367, 1206
Mva1269I	GAATGC	1 cut(s)	977
MvaI	CCWGG	1 cut(s)	1206
MvnI	CGCG	8 cut(s)	232, 243, 267, 315, 323, 491, 503, 538
NarI	GGCGCC	1 cut(s)	246
NciI	CCSGG	2 cut(s)	308, 367
NdeI	CATATG	1 cut(s)	510
NdeII	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
NheI	GCTAGC	1 cut(s)	1118
NlaIII	CATG	4 cut(s)	119, 286, 950, 1187
NlaIV	GGNNCC	5 cut(s)	86, 247, 462, 1006, 1211
NmuCI	GTSAC	2 cut(s)	751, 923
NotI	GCGGCCGC	1 cut(s)	274
NruI	TCGCGA	1 cut(s)	315
NsiI	ATGCAT	1 cut(s)	1229
NspI	RCATGY	1 cut(s)	950
PagI	TCATGA	1 cut(s)	1183
PaqCI	CACCTGC	3 cut(s)	562, 1058, 1091
PciSI	GCTCTTC	1 cut(s)	616
PcsI	WCGNNNNNNNCGW	1 cut(s)	716
PctI	GAATGC	1 cut(s)	977
PfeI	GAWTC	3 cut(s)	10, 733, 1193
PleI	GAGTC	5 cut(s)	325, 600, 706, 776, 890
PluTI	GGCGCC	1 cut(s)	249
PmaCI	CACGTG	1 cut(s)	550
PmlI	CACGTG	1 cut(s)	550
PpsI	GAGTC	5 cut(s)	325, 600, 706, 776, 890
Ppu21I	YACGTR	1 cut(s)	550
Psp124BI	GAGCTC	1 cut(s)	611
Psp6I	CCWGG	1 cut(s)	1204
PspCI	CACGTG	1 cut(s)	550
PspFI	CCCAGC	1 cut(s)	130
PspGI	CCWGG	1 cut(s)	1204
PspN4I	GGNNCC	5 cut(s)	86, 247, 462, 1006, 1211
PspPI	GGNCC	4 cut(s)	304, 357, 369, 385
PstI	CTGCAG	1 cut(s)	498
PsuI	RGATCY	2 cut(s)	84, 1209
PvuII	CAGCTG	1 cut(s)	334
RruI	TCGCGA	1 cut(s)	315
RsaI	GTAC	2 cut(s)	845, 1144
RsaNI	GTAC	2 cut(s)	844, 1143
RseI	CAYNNNNRTG	1 cut(s)	377
Rsr2I	CGGWCCG	1 cut(s)	304
RsrII	CGGWCCG	1 cut(s)	304
SacI	GAGCTC	1 cut(s)	611
SacII	CCGCGG	2 cut(s)	244, 324
SapI	GCTCTTC	1 cut(s)	616
SaqAI	TTAA	1 cut(s)	879
Sau3AI	GATC	6 cut(s)	84, 825, 829, 1071, 1180, 1209
Sau96I	GGNCC	4 cut(s)	304, 357, 369, 385
SchI	GAGTC	5 cut(s)	326, 601, 707, 776, 890
ScrFI	CCNGG	3 cut(s)	308, 367, 1206
SduI	GDGCHC	3 cut(s)	423, 536, 611
SfaNI	GCATC	5 cut(s)	922, 955, 987, 1214, 1236
SfcI	CTRYAG	1 cut(s)	494
SfoI	GGCGCC	1 cut(s)	247
Sfr303I	CCGCGG	2 cut(s)	244, 324
SgrBI	CCGCGG	2 cut(s)	244, 324
SinI	GGWCC	2 cut(s)	304, 385
SmiMI	CAYNNNNRTG	1 cut(s)	377
Sse9I	AATT	6 cut(s)	45, 70, 92, 691, 791, 1327
SspDI	GGCGCC	1 cut(s)	245
SspI	AATATT	1 cut(s)	62
SspMI	CTAG	1 cut(s)	1119
SstI	GAGCTC	1 cut(s)	611
StyD4I	CCNGG	3 cut(s)	306, 365, 1204
StyI	CCWWGG	1 cut(s)	17
TaiI	ACGT	2 cut(s)	552, 1361
TaqI	TCGA	5 cut(s)	292, 528, 828, 1304, 1345
TaqII	GACCGA	2 cut(s)	292, 932
TasI	AATT	6 cut(s)	45, 70, 92, 691, 791, 1327
TatI	WGTACW	2 cut(s)	843, 1142
TfiI	GAWTC	3 cut(s)	10, 733, 1193
Tru1I	TTAA	1 cut(s)	879
Tru9I	TTAA	1 cut(s)	879
TscAI	CASTG	5 cut(s)	503, 605, 934, 1049, 1138
TseFI	GTSAC	2 cut(s)	751, 923
TseI	GCWGC	5 cut(s)	204, 331, 406, 493, 975
Tsp45I	GTSAC	2 cut(s)	751, 923
TspDTI	ATGAA	1 cut(s)	1200
TspGWI	ACGGA	2 cut(s)	97, 956
TspRI	CASTG	5 cut(s)	503, 605, 934, 1049, 1138
VneI	GTGCAC	1 cut(s)	532
VpaK11BI	GGWCC	2 cut(s)	304, 385
XapI	RAATTY	3 cut(s)	45, 70, 691
XceI	RCATGY	1 cut(s)	950
XcmI	CCANNNNNNNNNTGG	2 cut(s)	379, 899
XspI	CTAG	1 cut(s)	1119
Zsp2I	ATGCAT	1 cut(s)	1229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.