Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002753

Physical Location & Seq

Genomic Coordinates Forward (+)

19839274 .. 19846855

Gene Structure 7582 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00299930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGCTTTTTGGTGATGTATCCACTTTTCGGTGTTGCATTGTTGGTTTGCATTGTGATTCCCTAGATATGGTTAAGGAAGAAAGGCCACAAATTACAAGGAGAGCAACCAGATCCTCCAATTTGGCTAAAAGTGTAGTTGAAGAAACAGATACAAGCAGTCAACACCCAAATGATGCTTCTGCGAGTTCAGACATGGTTAAAGAAGAAATCCCACAAATCACAAGGAGAACAACCCGATCCTCTGCTTTAGCCAAATGTTCAAACAATGTAGTTGAAGAAACAAAAGCAAATAGTCAGCAGCAACTGACTTTAGATGACCTTGTGATTGGAGAAGAAGGAGAGTCCTTTAGCTTCGCTGATCTGGTGTCTAGTTTTCCTGGTAGAGATAGTCAGATCAAAGAGCTTGTGCACCTTTTGGGTCCGCAGAACTCTCCTATGCTTCCTATATTTATATACGGAGGCTCTTCCACTGGAAAAACTAGTATTGTTCTACAAACATTTAGGCATCTTAAAAGACCTATTGTTTACCTAAGCTGCCTTACATGTTATAATCCTCGAATCTTGTTTGAATCCATATTGAATCAATTGTTCCTTCACCACAAGAATGCAGAAAATGGTTATTCTAGTGCAAAGCGCTGTGAAAAACCGTCTGATTTTGTGAATTTTCTTCGCGAAGCCTTGGTTAGCATTATTGGTAATCCTCAGGGACAAAAGTCAGGAATGAGTAGCAAAAGGTCAGGAAAGGCTAGTGGAAATATGATCTACTTGATTTTTGACAATTTGGAGCGTGTCAAAGGGTGGGACAAAGGTTCTACTGTGTCACCTTTGTTGTTTAATCTCTATGATACTCTGAAAAAGCCCGAGGTCGGTCTTATCTTCATCAGCAATACCTCACTGGATACATATGACTCAAATATGGGTTATGTTGAGCCTAACCCTCTATATCTTCCTGATTATACGGATGATGATCTTGGTCAAATCTTAATGAGAAACCAAGCAAACAAAAAGCTTTATACCTCTTTTCTCAGTGTTGTACTAAGGCCTTTCAGTAGAATTACCAGACGAGTGGATGAATTGTCTGGTGCCTTTTCACTATTATTCAGAAAATATTGTGAACCTGTTACTGATCTTGGGGTTGTTCCCAATGAAGAAATGAAGAGAAAGTTGTTTAGTCAATTTCAGCCCCATATTGCTCCTGCACTGAATGAGATATTTAAGGTTTCAACTCAGCCTTCCACTGAAGTTGAAGCTAGGGAGAGAAAGCCAAAGGGTAGCACAAGGAAATCCGGAGGTTATGAAGTTGTTGACCAGTTGGATTTTCACATGTCTACTTCTGCCAACTATTCTACAATTTCAGCATTCCTTGCTTCAAGAAATCCAGCTACCCTTGATGCATCATTGTTCGATTCTACTGGAGGTTCTAATAATCGAAAACGAAAGAGGAAGGTCTCTGAGAAGTCAATGGAACAGAAGGAAACTGCAGAACAGGAATTACTCATGAAGGGCCCCGGAACATTCGCAATGGAGAGGTTACTAGCCATATTCCAGTGTATTACGTCCGTGGCGGAAGATCCGCTTGATGATGAGGAACAAGCACAGGATGGGTTAGGAATTCAAGATGGACATTGTGGGCTCATGTCTGATGTCCTCTTACAATTGACTAGTCTCTGTGGTGCAAATTTTATTGTCAAAGGAGGAAGCTGCCCACTGGAGGGCTCAACTCGCTATCGTTCTACAGTTAGTGAAGATATGGCCTTGCAGGTAGCAAGGAGCATTAAGTTTCCTCTCTCAAAGTACTTGTACAGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003688 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005664 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009744 GO:0009987 GO:0010033 GO:0031974 GO:0031981 GO:0032991 GO:0034285 GO:0034641 GO:0034645 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_16 ORC5_C

Protein Analysis

603

Amino Acids

67.21

Weight (kDa)

7.09

Isoelectric Point (pI)

46.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_16	PF13191	125 - 269	9.1e-12	AAA ATPase domain
ORC5_lid	PF21639	338 - 391	2.5e-10	ORC5, lid domain
ORC5_C	PF14630	442 - 600	1.1e-34	Origin recognition complex (ORC) subunit 5 C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002753)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29910 AT4G29910
fragaria_vesca	FvH4_7g14490 FvH4_7g14490 FvH4_7g14490 FvH4_7g14490 FvH4_7g14490
malus_domestica	MD01G1065000.v1.1 MD07G1135400.v1.1
prunus_persica	Prupe.2G172000_v2.0.a1 Prupe.2G172000_v2.0.a1 Prupe.2G172000_v2.0.a1
pyrus_communis	pycom01g09430 pycom07g13260
rosa_chinensis	RchiOBHm_Chr1g0355901 RchiOBHm_Chr2g0161261
rosa_laevigata	RLG00000021273 RLG00000028117
rosa_multiflora	Rmu_sc0004705.1_g000017 Rmu_sc0009869.1_g000009
rosa_roxburghii	Rroxscaffold_2G00088970 Rroxscaffold_2G00110130 Rroxscaffold_4G00299930
rosa_rugosa	Rorug01G0248300 Rorug01G0248400 Rorug01G0248500 Rorug02G0487300 Rorug02G0487400 Rorug02G0487500
rosa_samantha	Rh1AG261600 Rh1BG229700 Rh1CG244700 Rh1DG257700 Rh2AG554200 Rh2BG567600 Rh2CG538100 Rh2DG577000
rosa_wichuraiana	Rw1G023100 Rw2G045850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	549
Acc36I	ACCTGC	1 cut(s)	1750
AccB1I	GGYRCC	1 cut(s)	1082
AccI	GTMKAC	1 cut(s)	1328
AccII	CGCG	1 cut(s)	672
AccIII	TCCGGA	1 cut(s)	1286
AciI	CCGC	3 cut(s)	422, 1565, 1574
AclWI	GGATC	3 cut(s)	105, 231, 1565
AcsI	RAATTY	3 cut(s)	661, 1611, 1678
AcuI	CTGAAG	1 cut(s)	1260
AfaI	GTAC	3 cut(s)	1035, 1796, 1802
AfeI	AGCGCT	1 cut(s)	635
AfiI	CCNNNNNNNGG	5 cut(s)	27, 67, 866, 1711, 1712
AflIII	ACRYGT	2 cut(s)	542, 1323
AgsI	TTSAA	9 cut(s)	140, 261, 275, 569, 580, 1224, 1247, 1371, 1616
AhlI	ACTAGT	2 cut(s)	479, 1661
AjnI	CCWGG	1 cut(s)	376
AjuI	GAANNNNNNNTTGG	2 cut(s)	160, 192
AluBI	AGCT	7 cut(s)	351, 403, 534, 1009, 1250, 1382, 1701
AluI	AGCT	7 cut(s)	351, 403, 534, 1009, 1250, 1382, 1701
Alw21I	GWGCWC	1 cut(s)	411
Alw26I	GTCTC	2 cut(s)	1453, 1670
Alw44I	GTGCAC	1 cut(s)	407
AlwI	GGATC	3 cut(s)	105, 231, 1565
AlwNI	CAGNNNCTG	1 cut(s)	304
Ama87I	CYCGRG	1 cut(s)	860
Aor13HI	TCCGGA	1 cut(s)	1286
Aor51HI	AGCGCT	1 cut(s)	635
AoxI	GGCC	4 cut(s)	83, 1040, 1504, 1752
ApaI	GGGCCC	1 cut(s)	1508
ApaLI	GTGCAC	1 cut(s)	407
ApeKI	GCWGC	3 cut(s)	298, 534, 1701
ApoI	RAATTY	3 cut(s)	661, 1611, 1678
AspLEI	GCGC	1 cut(s)	636
AspS9I	GGNCC	3 cut(s)	419, 1504, 1505
AsuC2I	CCSGG	1 cut(s)	1509
AsuHPI	GGTGA	3 cut(s)	23, 587, 813
AvaI	CYCGRG	1 cut(s)	860
AvaII	GGWCC	1 cut(s)	419
AxyI	CCTNAGG	1 cut(s)	702
BaeGI	GKGCMC	2 cut(s)	411, 1508
BanI	GGYRCC	1 cut(s)	1082
BanII	GRGCYC	3 cut(s)	1508, 1635, 1718
Bbv12I	GWGCWC	1 cut(s)	411
BbvI	GCAGC	3 cut(s)	310, 521, 1688
BccI	CCATC	2 cut(s)	1595, 1613
BciT130I	CCWGG	1 cut(s)	378
BciVI	GTATCC	2 cut(s)	28, 892
BcnI	CCSGG	1 cut(s)	1509
BcoDI	GTCTC	2 cut(s)	1453, 1670
BcuI	ACTAGT	2 cut(s)	479, 1661
BfaI	CTAG	8 cut(s)	62, 369, 480, 624, 747, 1251, 1535, 1662
BfmI	CTRYAG	2 cut(s)	1479, 1734
BfoI	RGCGCY	1 cut(s)	637
BfuAI	ACCTGC	1 cut(s)	1750
BfuI	GTATCC	2 cut(s)	28, 892
BisI	GCNGC	3 cut(s)	299, 535, 1702
BlsI	GCNGC	3 cut(s)	300, 536, 1703
BmcAI	AGTACT	1 cut(s)	1796
Bme1390I	CCNGG	2 cut(s)	378, 1509
Bme18I	GGWCC	1 cut(s)	419
BmeT110I	CYCGRG	1 cut(s)	860
BmgT120I	GGNCC	3 cut(s)	419, 1504, 1505
BmiI	GGNNCC	4 cut(s)	420, 1084, 1506, 1507
BmrFI	CCNGG	2 cut(s)	378, 1509
BmsI	GCATC	4 cut(s)	163, 514, 1381, 1403
BoxI	GACNNNNGTC	1 cut(s)	712
BpmI	CTGGAG	2 cut(s)	1434, 1730
Bpu10I	CCTNAGC	1 cut(s)	530
BpuMI	CCSGG	1 cut(s)	1509
BsaBI	GATNNNNATC	1 cut(s)	966
BsaI	GGTCTC	1 cut(s)	1453
BsaJI	CCNNGG	4 cut(s)	678, 861, 1507, 1560
BsaWI	WCCGGW	1 cut(s)	1286
Bsc4I	CCNNNNNNNGG	5 cut(s)	27, 67, 866, 1711, 1712
Bse1I	ACTGG	6 cut(s)	475, 900, 1309, 1417, 1546, 1713
Bse21I	CCTNAGG	1 cut(s)	702
Bse3DI	GCAATG	1 cut(s)	1527
Bse8I	GATNNNNATC	1 cut(s)	966
BseAI	TCCGGA	1 cut(s)	1286
BseBI	CCWGG	1 cut(s)	378
BseDI	CCNNGG	4 cut(s)	678, 861, 1507, 1560
BseGI	GGATG	3 cut(s)	967, 1075, 1606
BseJI	GATNNNNATC	1 cut(s)	966
BseLI	CCNNNNNNNGG	5 cut(s)	27, 67, 866, 1711, 1712
BseMI	GCAATG	1 cut(s)	1527
BseMII	CTCAG	4 cut(s)	716, 1039, 1241, 1443
BseNI	ACTGG	6 cut(s)	475, 900, 1309, 1417, 1546, 1713
BseSI	GKGCMC	2 cut(s)	411, 1508
BseXI	GCAGC	3 cut(s)	310, 521, 1688
BsgI	GTGCAG	1 cut(s)	1182
Bsh1236I	CGCG	1 cut(s)	672
BshFI	GGCC	4 cut(s)	85, 1042, 1506, 1754
BshNI	GGYRCC	1 cut(s)	1082
BsiHKAI	GWGCWC	1 cut(s)	411
BsiHKCI	CYCGRG	1 cut(s)	860
BsiSI	CCGG	2 cut(s)	1287, 1509
BslFI	GGGAC	2 cut(s)	720, 815
BslI	CCNNNNNNNGG	5 cut(s)	27, 67, 866, 1711, 1712
BsmAI	GTCTC	2 cut(s)	1453, 1670
BsmFI	GGGAC	2 cut(s)	720, 815
BsmI	GAATGC	2 cut(s)	610, 1358
BsnI	GGCC	4 cut(s)	85, 1042, 1506, 1754
Bso31I	GGTCTC	1 cut(s)	1453
BsoBI	CYCGRG	1 cut(s)	860
Bsp120I	GGGCCC	1 cut(s)	1504
Bsp1286I	GDGCHC	4 cut(s)	411, 1508, 1635, 1718
Bsp13I	TCCGGA	1 cut(s)	1286
Bsp1407I	TGTACA	1 cut(s)	1800
Bsp143I	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
Bsp68I	TCGCGA	1 cut(s)	672
BspACI	CCGC	3 cut(s)	422, 1565, 1574
BspANI	GGCC	4 cut(s)	85, 1042, 1506, 1754
BspCNI	CTCAG	4 cut(s)	715, 1038, 1240, 1444
BspEI	TCCGGA	1 cut(s)	1286
BspFNI	CGCG	1 cut(s)	672
BspHI	TCATGA	1 cut(s)	1497
BspLI	GGNNCC	4 cut(s)	420, 1084, 1506, 1507
BspMAI	CTGCAG	1 cut(s)	1483
BspMI	ACCTGC	1 cut(s)	1750
BspPI	GGATC	3 cut(s)	105, 231, 1565
BspQI	GCTCTTC	1 cut(s)	469
BspT107I	GGYRCC	1 cut(s)	1082
BspTNI	GGTCTC	1 cut(s)	1453
BsrDI	GCAATG	1 cut(s)	1527
BsrGI	TGTACA	1 cut(s)	1800
BsrI	ACTGG	6 cut(s)	475, 900, 1309, 1417, 1546, 1713
BssECI	CCNNGG	4 cut(s)	678, 861, 1507, 1560
BssMI	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
BssT1I	CCWWGG	1 cut(s)	678
Bst2UI	CCWGG	1 cut(s)	378
Bst4CI	ACNGT	3 cut(s)	648, 817, 1738
Bst6I	CTCTTC	2 cut(s)	469, 1151
BstAPI	GCANNNNNTGC	1 cut(s)	1364
BstAUI	TGTACA	1 cut(s)	1800
BstDEI	CTNAG	6 cut(s)	530, 702, 1025, 1037, 1227, 1452
BstDSI	CCRYGG	1 cut(s)	1560
BstF5I	GGATG	3 cut(s)	967, 1075, 1606
BstFNI	CGCG	1 cut(s)	672
BstH2I	RGCGCY	1 cut(s)	637
BstHHI	GCGC	1 cut(s)	636
BstKTI	GATC	8 cut(s)	113, 239, 361, 396, 762, 970, 1129, 1573
BstMAI	GTCTC	2 cut(s)	1453, 1670
BstMBI	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
BstMWI	GCNNNNNNNGC	2 cut(s)	1364, 1722
BstNI	CCWGG	1 cut(s)	378
BstNSI	RCATGY	2 cut(s)	546, 1327
BstPAI	GACNNNNGTC	1 cut(s)	712
BstSCI	CCNGG	2 cut(s)	376, 1507
BstSFI	CTRYAG	2 cut(s)	1479, 1734
BstSLI	GKGCMC	2 cut(s)	411, 1508
BstUI	CGCG	1 cut(s)	672
BstV1I	GCAGC	3 cut(s)	310, 521, 1688
BstX2I	RGATCY	2 cut(s)	110, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	1066
BstYI	RGATCY	2 cut(s)	110, 1570
Bsu36I	CCTNAGG	1 cut(s)	702
BsuI	GTATCC	2 cut(s)	28, 892
BsuRI	GGCC	4 cut(s)	85, 1042, 1506, 1754
BtgI	CCRYGG	1 cut(s)	1560
BtsCI	GGATG	3 cut(s)	967, 1075, 1606
BtsIMutI	CAGTG	7 cut(s)	468, 893, 1033, 1199, 1236, 1553, 1706
BtuMI	TCGCGA	1 cut(s)	672
BveI	ACCTGC	1 cut(s)	1750
CaiI	CAGNNNCTG	1 cut(s)	304
CciI	TCATGA	1 cut(s)	1497
CfoI	GCGC	1 cut(s)	636
Cfr13I	GGNCC	3 cut(s)	419, 1504, 1505
Csp6I	GTAC	3 cut(s)	1034, 1795, 1801
CspCI	CAANNNNNGTGG	2 cut(s)	1225, 1260
CviAII	CATG	5 cut(s)	193, 543, 1324, 1498, 1636
CviQI	GTAC	3 cut(s)	1034, 1795, 1801
DdeI	CTNAG	6 cut(s)	530, 702, 1025, 1037, 1227, 1452
DpnI	GATC	8 cut(s)	112, 238, 360, 395, 761, 969, 1128, 1572
DpnII	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
Eam1104I	CTCTTC	2 cut(s)	469, 1151
EarI	CTCTTC	2 cut(s)	469, 1151
EciI	GGCGGA	1 cut(s)	1580
Eco130I	CCWWGG	1 cut(s)	678
Eco147I	AGGCCT	1 cut(s)	1042
Eco24I	GRGCYC	3 cut(s)	1508, 1635, 1718
Eco31I	GGTCTC	1 cut(s)	1453
Eco47I	GGWCC	1 cut(s)	419
Eco47III	AGCGCT	1 cut(s)	635
Eco57I	CTGAAG	1 cut(s)	1260
Eco81I	CCTNAGG	1 cut(s)	702
Eco88I	CYCGRG	1 cut(s)	860
EcoO109I	RGGNCCY	2 cut(s)	1504, 1505
EcoRI	GAATTC	1 cut(s)	1611
EcoRII	CCWGG	1 cut(s)	376
EcoT14I	CCWWGG	1 cut(s)	678
EcoT22I	ATGCAT	1 cut(s)	1396
EcoT38I	GRGCYC	3 cut(s)	1508, 1635, 1718
ErhI	CCWWGG	1 cut(s)	678
FaeI	CATG	5 cut(s)	196, 546, 1327, 1501, 1639
FalI	AAGNNNNNCTT	2 cut(s)	1560, 1592
FaqI	GGGAC	2 cut(s)	720, 815
FatI	CATG	5 cut(s)	192, 542, 1323, 1497, 1635
FauNDI	CATATG	1 cut(s)	904
FblI	GTMKAC	1 cut(s)	1328
Fnu4HI	GCNGC	3 cut(s)	299, 535, 1702
FokI	GGATG	3 cut(s)	974, 1082, 1613
FriOI	GRGCYC	3 cut(s)	1508, 1635, 1718
Fsp4HI	GCNGC	3 cut(s)	299, 535, 1702
FspBI	CTAG	8 cut(s)	62, 369, 480, 624, 747, 1251, 1535, 1662
GlaI	GCGC	1 cut(s)	635
GluI	GCNGC	3 cut(s)	299, 535, 1702
GsuI	CTGGAG	2 cut(s)	1434, 1730
HaeII	RGCGCY	1 cut(s)	637
HaeIII	GGCC	4 cut(s)	85, 1042, 1506, 1754
HapII	CCGG	2 cut(s)	1287, 1509
HhaI	GCGC	1 cut(s)	636
Hin1II	CATG	5 cut(s)	196, 546, 1327, 1501, 1639
Hin6I	GCGC	1 cut(s)	634
HinP1I	GCGC	1 cut(s)	634
HincII	GTYRAC	2 cut(s)	161, 1306
HindII	GTYRAC	2 cut(s)	161, 1306
HindIII	AAGCTT	1 cut(s)	1007
HinfI	GANTC	7 cut(s)	56, 341, 558, 569, 580, 908, 1406
HpaII	CCGG	2 cut(s)	1287, 1509
HphI	GGTGA	3 cut(s)	23, 587, 813
Hpy166II	GTNNAC	6 cut(s)	161, 409, 526, 1115, 1306, 1329
Hpy188I	TCNGA	7 cut(s)	190, 393, 652, 852, 1103, 1453, 1642
Hpy188III	TCNNGA	8 cut(s)	671, 717, 738, 950, 1287, 1371, 1498, 1616
Hpy8I	GTNNAC	6 cut(s)	161, 409, 526, 1115, 1306, 1329
HpyAV	CCTTC	6 cut(s)	329, 602, 1242, 1438, 1465, 1495
HpyCH4III	ACNGT	3 cut(s)	648, 817, 1738
HpyCH4IV	ACGT	1 cut(s)	1556
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1364, 1722
HpyF3I	CTNAG	6 cut(s)	530, 702, 1025, 1037, 1227, 1452
HpySE526I	ACGT	1 cut(s)	1556
Hsp92II	CATG	5 cut(s)	196, 546, 1327, 1501, 1639
HspAI	GCGC	1 cut(s)	634
Kpn2I	TCCGGA	1 cut(s)	1286
Kzo9I	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
LguI	GCTCTTC	1 cut(s)	469
LmnI	GCTCC	3 cut(s)	784, 1198, 1770
Lsp1109I	GCAGC	3 cut(s)	310, 521, 1688
LweI	GCATC	4 cut(s)	163, 514, 1381, 1403
MaeI	CTAG	8 cut(s)	62, 369, 480, 624, 747, 1251, 1535, 1662
MaeII	ACGT	1 cut(s)	1556
MaeIII	GTNAC	3 cut(s)	819, 1120, 1530
MalI	GATC	8 cut(s)	112, 238, 360, 395, 761, 969, 1128, 1572
MboI	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
MfeI	CAATTG	2 cut(s)	584, 1655
MflI	RGATCY	2 cut(s)	110, 1570
MhlI	GDGCHC	4 cut(s)	411, 1508, 1635, 1718
MlyI	GAGTC	2 cut(s)	350, 902
MmeI	TCCRAC	1 cut(s)	1293
Mph1103I	ATGCAT	1 cut(s)	1396
MroI	TCCGGA	1 cut(s)	1286
MseI	TTAA	7 cut(s)	72, 198, 510, 834, 983, 1215, 1776
MslI	CAYNNNNRTG	2 cut(s)	168, 603
MspI	CCGG	2 cut(s)	1287, 1509
MspR9I	CCNGG	2 cut(s)	378, 1509
MunI	CAATTG	2 cut(s)	584, 1655
Mva1269I	GAATGC	2 cut(s)	610, 1358
MvaI	CCWGG	1 cut(s)	378
MvnI	CGCG	1 cut(s)	672
MwoI	GCNNNNNNNGC	2 cut(s)	1364, 1722
NciI	CCSGG	1 cut(s)	1509
NdeI	CATATG	1 cut(s)	904
NdeII	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
NlaIII	CATG	5 cut(s)	196, 546, 1327, 1501, 1639
NlaIV	GGNNCC	4 cut(s)	420, 1084, 1506, 1507
NmuCI	GTSAC	1 cut(s)	819
NruI	TCGCGA	1 cut(s)	672
NsiI	ATGCAT	1 cut(s)	1396
NspI	RCATGY	2 cut(s)	546, 1327
PagI	TCATGA	1 cut(s)	1497
PceI	AGGCCT	1 cut(s)	1042
PciI	ACATGT	2 cut(s)	542, 1323
PciSI	GCTCTTC	1 cut(s)	469
PctI	GAATGC	2 cut(s)	610, 1358
PfeI	GAWTC	5 cut(s)	56, 558, 569, 580, 1406
PkrI	GCNGC	3 cut(s)	300, 536, 1703
PleI	GAGTC	2 cut(s)	349, 902
PpsI	GAGTC	2 cut(s)	349, 902
PscI	ACATGT	2 cut(s)	542, 1323
PshAI	GACNNNNGTC	1 cut(s)	712
PsiI	TTATAA	1 cut(s)	549
Psp6I	CCWGG	1 cut(s)	376
PspGI	CCWGG	1 cut(s)	376
PspN4I	GGNNCC	4 cut(s)	420, 1084, 1506, 1507
PspOMI	GGGCCC	1 cut(s)	1504
PspPI	GGNCC	3 cut(s)	419, 1504, 1505
PsrI	GAACNNNNNNTAC	2 cut(s)	1476, 1508
PstI	CTGCAG	1 cut(s)	1483
PstNI	CAGNNNCTG	1 cut(s)	304
PsuI	RGATCY	2 cut(s)	110, 1570
RruI	TCGCGA	1 cut(s)	672
RsaI	GTAC	3 cut(s)	1035, 1796, 1802
RsaNI	GTAC	3 cut(s)	1034, 1795, 1801
RseI	CAYNNNNRTG	2 cut(s)	168, 603
SapI	GCTCTTC	1 cut(s)	469
SaqAI	TTAA	7 cut(s)	72, 198, 510, 834, 983, 1215, 1776
SatI	GCNGC	3 cut(s)	299, 535, 1702
Sau3AI	GATC	8 cut(s)	110, 236, 358, 393, 759, 967, 1126, 1570
Sau96I	GGNCC	3 cut(s)	419, 1504, 1505
ScaI	AGTACT	1 cut(s)	1796
SchI	GAGTC	2 cut(s)	350, 902
ScrFI	CCNGG	2 cut(s)	378, 1509
SduI	GDGCHC	4 cut(s)	411, 1508, 1635, 1718
SfaNI	GCATC	4 cut(s)	163, 514, 1381, 1403
SfcI	CTRYAG	2 cut(s)	1479, 1734
SinI	GGWCC	1 cut(s)	419
SmiMI	CAYNNNNRTG	2 cut(s)	168, 603
SpeI	ACTAGT	2 cut(s)	479, 1661
SseBI	AGGCCT	1 cut(s)	1042
SsiI	CCGC	3 cut(s)	422, 1565, 1574
SspI	AATATT	1 cut(s)	1109
SspMI	CTAG	8 cut(s)	62, 369, 480, 624, 747, 1251, 1535, 1662
StuI	AGGCCT	1 cut(s)	1042
StyD4I	CCNGG	2 cut(s)	376, 1507
StyI	CCWWGG	1 cut(s)	678
TaaI	ACNGT	3 cut(s)	648, 817, 1738
TaiI	ACGT	1 cut(s)	1559
TaqI	TCGA	3 cut(s)	556, 1404, 1429
TaqII	GACCGA	1 cut(s)	857
TatI	WGTACW	3 cut(s)	1033, 1794, 1800
TfiI	GAWTC	5 cut(s)	56, 558, 569, 580, 1406
Tru1I	TTAA	7 cut(s)	72, 198, 510, 834, 983, 1215, 1776
Tru9I	TTAA	7 cut(s)	72, 198, 510, 834, 983, 1215, 1776
TscAI	CASTG	7 cut(s)	475, 900, 1033, 1206, 1243, 1553, 1713
TseFI	GTSAC	1 cut(s)	819
TseI	GCWGC	3 cut(s)	298, 534, 1701
Tsp45I	GTSAC	1 cut(s)	819
TspDTI	ATGAA	6 cut(s)	868, 1086, 1161, 1169, 1311, 1514
TspGWI	ACGGA	3 cut(s)	471, 974, 1549
TspRI	CASTG	7 cut(s)	475, 900, 1033, 1206, 1243, 1553, 1713
VneI	GTGCAC	1 cut(s)	407
VpaK11BI	GGWCC	1 cut(s)	419
XapI	RAATTY	3 cut(s)	661, 1611, 1678
XceI	RCATGY	2 cut(s)	546, 1327
XmiI	GTMKAC	1 cut(s)	1328
XspI	CTAG	8 cut(s)	62, 369, 480, 624, 747, 1251, 1535, 1662
ZrmI	AGTACT	1 cut(s)	1796
Zsp2I	ATGCAT	1 cut(s)	1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.