Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002753

Physical Location & Seq

Genomic Coordinates Forward (+)

61695425 .. 61699315

Gene Structure 3891 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0487500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGACCGCCTATCTCACTCTCCGCCGCCGCTCTCTCACGCACCTCACGCGCCACTTCTCCACCAAAACCAAAATCCCCACTCTCTATTCCCCCACCGCCACCCAAAACGACGCGGGACCCACCACAGCCCTCCAACTCCTCTCATGGGGCCGAGGCGCCTCCGGCCAACTCGGCGGCGGCATCGAAGAAATCCGGCTCTACCCATCTCCGGTGGCCAACCTCGCCGTCCCCTCCTCCTCCTTCACCCTCTCACCTACTCCAGGCAAAATCCAAACACCCAAAGACGGTAATGGCGTTTTGGAGGTGGGCATTTCTTGTGGGTTGTTTCACTCTTCGCTATTGGTGGACGGCAAGGTTTGGATTTGGGGTAAAGGCGATGGGGGTCGCCTCGGTTTTGGGCATGAAAACTCTGCGTTTCTGCCCACATTGAATCCCTATTTGGAGTCGATACGGTGCGTTTCGCTTGGTGGGTTGCATTCTGTTTCCCTCACCTCTCTCGGCGACGTCTATACTTGGGGTTATGGTGGTTTTGGTGCACTGGGACATTCTATCTATACCAGAGAATTGTTTCCTAGATTGGTTGAAGGTTCATGGAGTGGGAGAATACAACATGTTTCAACTAGTGGGACGCATACTGCTGCCATCACAGAATCAGGAGAACTTTATACTTGGGGTCGAGATGAAGGGGATGGTAGATTGGGCCTTGGTCCTAATCGCGGCCCAAATGAGGGTGGTGGACTTAGCATTCCCTCCAAAGTGAAAGCATTACCTATGCCTGTGGCTGCTGTTTCTTGCGGAGGGTTTTTCACTATGGTACTAACTGAGAATGGGGAACTTTGGAATTGGGGAGCAAACTCTAACTTTGAGCTTGGAAGGGGTGATAGGGTTGGTGGCTGGCAACCAAAACCTGTACCTAGTCTTGTAGGCATTCGTATCATTCAGGTAGCAAGCGGTGGATATCATTCTATTGCATTAACTGATGAAGGTAAAGTACTTTCTTGGGGCCATGGTGGACATGGTCAGTTGGGCAACTCTTCTGTCCAAAATCAAAAAACACCTACAGTTGTGAAGGCTCTAACTGACGAGCGTGTCATCTATATAGCTTGTGGAGGTTCATCTTCAGCGGCTATAACTGATACAGGGAAGTTGTATATGTGGGGATACACCAAAGATTCTCAGTTAGGAGTTCCTGGGCTGCCAGAGATACAATCAAGCCCTGTTGAAGTCAAATTTCTTATGGAGGATGATGGATTAGGACCCCACAATGTTCTTTCAATTGCAGTTGGTGCATCTCATGCTATGTGTTTGGTTTCAAGGGGTGAATCATCCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003688 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005664 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009744 GO:0009987 GO:0010033 GO:0031974 GO:0031981 GO:0032991 GO:0034285 GO:0034641 GO:0034645 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_16 ORC5_C

Protein Analysis

444

Amino Acids

46.83

Weight (kDa)

7.73

Isoelectric Point (pI)

32.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_RLD	PF25390	45 - 435	2.7e-78	RCC1-like domain
RCC1	PF00415	116 - 162	2.7e-08	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	167 - 215	1.1e-09	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	218 - 273	1e-08	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	260 - 287	3.9e-07	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	276 - 325	2.2e-11	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	312 - 341	1.7e-10	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	328 - 377	2.7e-13	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	381 - 436	9.6e-07	Regulator of chromosome condensation (RCC1) repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002753)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29910 AT4G29910
fragaria_vesca	FvH4_7g14490 FvH4_7g14490 FvH4_7g14490 FvH4_7g14490 FvH4_7g14490
malus_domestica	MD01G1065000.v1.1 MD07G1135400.v1.1
prunus_persica	Prupe.2G172000_v2.0.a1 Prupe.2G172000_v2.0.a1 Prupe.2G172000_v2.0.a1
pyrus_communis	pycom01g09430 pycom07g13260
rosa_chinensis	RchiOBHm_Chr1g0355901 RchiOBHm_Chr2g0161261
rosa_laevigata	RLG00000021273 RLG00000028117
rosa_multiflora	Rmu_sc0004705.1_g000017 Rmu_sc0009869.1_g000009
rosa_roxburghii	Rroxscaffold_2G00088970 Rroxscaffold_2G00110130 Rroxscaffold_4G00299930
rosa_rugosa	Rorug01G0248300 Rorug01G0248400 Rorug01G0248500 Rorug02G0487300 Rorug02G0487400 Rorug02G0487500
rosa_samantha	Rh1AG261600 Rh1BG229700 Rh1CG244700 Rh1DG257700 Rh2AG554200 Rh2BG567600 Rh2CG538100 Rh2DG577000
rosa_wichuraiana	Rw1G023100 Rw2G045850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1088
AatII	GACGTC	1 cut(s)	507
AccB1I	GGYRCC	1 cut(s)	155
AccBSI	CCGCTC	1 cut(s)	30
AccII	CGCG	3 cut(s)	49, 113, 717
AcoI	YGGCCR	2 cut(s)	163, 213
AcsI	RAATTY	1 cut(s)	1229
AcuI	CTGAAG	1 cut(s)	1104
AcyI	GRCGYC	2 cut(s)	156, 504
AfaI	GTAC	3 cut(s)	816, 912, 993
AfiI	CCNNNNNNNGG	7 cut(s)	145, 208, 260, 284, 716, 727, 728
AflIII	ACRYGT	1 cut(s)	610
AgsI	TTSAA	6 cut(s)	430, 584, 618, 1223, 1275, 1314
AhlI	ACTAGT	1 cut(s)	620
AjnI	CCWGG	2 cut(s)	259, 1189
AjuI	GAANNNNNNNTTGG	2 cut(s)	422, 454
AluBI	AGCT	2 cut(s)	868, 1103
AluI	AGCT	2 cut(s)	868, 1103
Alw21I	GWGCWC	1 cut(s)	538
Alw44I	GTGCAC	1 cut(s)	534
AoxI	GGCC	6 cut(s)	148, 163, 213, 700, 718, 1003
ApaLI	GTGCAC	1 cut(s)	534
ApeKI	GCWGC	3 cut(s)	638, 782, 1195
ApoI	RAATTY	1 cut(s)	1229
Asp700I	GAANNNNTTC	1 cut(s)	567
AspLEI	GCGC	2 cut(s)	51, 158
AspS9I	GGNCC	7 cut(s)	116, 148, 700, 707, 719, 1003, 1256
AsuHPI	GGTGA	5 cut(s)	235, 243, 481, 890, 1331
AvaII	GGWCC	3 cut(s)	116, 707, 1256
BaeGI	GKGCMC	1 cut(s)	538
BalI	TGGCCA	1 cut(s)	215
BanI	GGYRCC	1 cut(s)	155
BarI	GAAGNNNNNNTAC	2 cut(s)	975, 1007
Bbv12I	GWGCWC	1 cut(s)	538
BbvI	GCAGC	3 cut(s)	625, 769, 1182
BccI	CCATC	5 cut(s)	211, 371, 650, 683, 1241
BceAI	ACGGC	2 cut(s)	209, 364
BciT130I	CCWGG	2 cut(s)	261, 1191
BciVI	GTATCC	1 cut(s)	1154
BcuI	ACTAGT	1 cut(s)	620
BfaI	CTAG	3 cut(s)	573, 621, 915
BfmI	CTRYAG	1 cut(s)	1059
BfoI	RGCGCY	1 cut(s)	159
BfuI	GTATCC	1 cut(s)	1154
BglI	GCCNNNNNGGC	1 cut(s)	171
BisI	GCNGC	9 cut(s)	25, 28, 175, 178, 639, 718, 783, 1125, 1196
BlsI	GCNGC	9 cut(s)	26, 29, 176, 179, 640, 719, 784, 1126, 1197
BmcAI	AGTACT	1 cut(s)	993
Bme1390I	CCNGG	2 cut(s)	261, 1191
Bme18I	GGWCC	3 cut(s)	116, 707, 1256
BmgT120I	GGNCC	7 cut(s)	116, 148, 700, 707, 719, 1003, 1256
BmiI	GGNNCC	6 cut(s)	117, 118, 149, 157, 1004, 1258
BmrFI	CCNGG	2 cut(s)	261, 1191
BmrI	ACTGGG	1 cut(s)	548
BmsI	GCATC	2 cut(s)	189, 1298
BmuI	ACTGGG	1 cut(s)	548
BpmI	CTGGAG	1 cut(s)	243
BsaHI	GRCGYC	2 cut(s)	156, 504
BsaJI	CCNNGG	5 cut(s)	151, 388, 703, 1006, 1190
BsaWI	WCCGGW	1 cut(s)	208
Bsc4I	CCNNNNNNNGG	7 cut(s)	145, 208, 260, 284, 716, 727, 728
Bse1I	ACTGG	1 cut(s)	543
BseBI	CCWGG	2 cut(s)	261, 1191
BseDI	CCNNGG	5 cut(s)	151, 388, 703, 1006, 1190
BseGI	GGATG	3 cut(s)	694, 1249, 1325
BseLI	CCNNNNNNNGG	7 cut(s)	145, 208, 260, 284, 716, 727, 728
BseMII	CTCAG	2 cut(s)	813, 1190
BseNI	ACTGG	1 cut(s)	543
BseRI	GAGGAG	3 cut(s)	128, 223, 226
BseSI	GKGCMC	1 cut(s)	538
BseXI	GCAGC	3 cut(s)	625, 769, 1182
Bsh1236I	CGCG	3 cut(s)	49, 113, 717
BshFI	GGCC	6 cut(s)	150, 165, 215, 702, 720, 1005
BshNI	GGYRCC	1 cut(s)	155
BsiHKAI	GWGCWC	1 cut(s)	538
BsiSI	CCGG	3 cut(s)	162, 193, 209
BslFI	GGGAC	4 cut(s)	129, 212, 555, 640
BslI	CCNNNNNNNGG	7 cut(s)	145, 208, 260, 284, 716, 727, 728
BsmFI	GGGAC	4 cut(s)	129, 212, 555, 640
BsmI	GAATGC	3 cut(s)	475, 744, 927
BsnI	GGCC	6 cut(s)	150, 165, 215, 702, 720, 1005
Bsp1286I	GDGCHC	1 cut(s)	538
Bsp19I	CCATGG	1 cut(s)	1006
BspANI	GGCC	6 cut(s)	150, 165, 215, 702, 720, 1005
BspCNI	CTCAG	2 cut(s)	814, 1189
BspFNI	CGCG	3 cut(s)	49, 113, 717
BspLI	GGNNCC	6 cut(s)	117, 118, 149, 157, 1004, 1258
BspT107I	GGYRCC	1 cut(s)	155
BsrBI	CCGCTC	1 cut(s)	30
BsrI	ACTGG	1 cut(s)	543
BssECI	CCNNGG	5 cut(s)	151, 388, 703, 1006, 1190
BssNI	GRCGYC	2 cut(s)	156, 504
BssT1I	CCWWGG	2 cut(s)	703, 1006
Bst2UI	CCWGG	2 cut(s)	261, 1191
Bst4CI	ACNGT	3 cut(s)	287, 453, 1063
Bst6I	CTCTTC	2 cut(s)	337, 1039
BstACI	GRCGYC	2 cut(s)	156, 504
BstAPI	GCANNNNNTGC	2 cut(s)	1286, 1295
BstC8I	GCNNGC	2 cut(s)	896, 949
BstDEI	CTNAG	3 cut(s)	740, 822, 1176
BstDSI	CCRYGG	1 cut(s)	1006
BstENI	CCTNNNNNAGG	1 cut(s)	258
BstF5I	GGATG	3 cut(s)	694, 1249, 1325
BstFNI	CGCG	3 cut(s)	49, 113, 717
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	2 cut(s)	51, 158
BstMWI	GCNNNNNNNGC	6 cut(s)	46, 162, 171, 221, 1286, 1295
BstNI	CCWGG	2 cut(s)	261, 1191
BstNSI	RCATGY	1 cut(s)	614
BstSCI	CCNGG	2 cut(s)	259, 1189
BstSFI	CTRYAG	1 cut(s)	1059
BstSLI	GKGCMC	1 cut(s)	538
BstUI	CGCG	3 cut(s)	49, 113, 717
BstV1I	GCAGC	3 cut(s)	625, 769, 1182
BsuI	GTATCC	1 cut(s)	1154
BsuRI	GGCC	6 cut(s)	150, 165, 215, 702, 720, 1005
BtgI	CCRYGG	1 cut(s)	1006
BtgZI	GCGATG	1 cut(s)	390
BtsCI	GGATG	3 cut(s)	694, 1249, 1325
BtsIMutI	CAGTG	1 cut(s)	536
Cac8I	GCNNGC	2 cut(s)	896, 949
CfoI	GCGC	2 cut(s)	51, 158
Cfr13I	GGNCC	7 cut(s)	116, 148, 700, 707, 719, 1003, 1256
CseI	GACGC	2 cut(s)	119, 637
Csp6I	GTAC	3 cut(s)	815, 911, 992
CviAII	CATG	7 cut(s)	144, 401, 591, 611, 1007, 1016, 1295
CviQI	GTAC	3 cut(s)	815, 911, 992
DdeI	CTNAG	3 cut(s)	740, 822, 1176
DinI	GGCGCC	1 cut(s)	157
DrdI	GACNNNNNNGTC	1 cut(s)	1088
DseDI	GACNNNNNNGTC	1 cut(s)	1088
EaeI	YGGCCR	2 cut(s)	163, 213
Eam1104I	CTCTTC	2 cut(s)	337, 1039
EarI	CTCTTC	2 cut(s)	337, 1039
EciI	GGCGGA	1 cut(s)	11
Eco130I	CCWWGG	2 cut(s)	703, 1006
Eco32I	GATATC	1 cut(s)	959
Eco47I	GGWCC	3 cut(s)	116, 707, 1256
Eco57I	CTGAAG	1 cut(s)	1104
EcoNI	CCTNNNNNAGG	1 cut(s)	258
EcoO109I	RGGNCCY	2 cut(s)	116, 1256
EcoRII	CCWGG	2 cut(s)	259, 1189
EcoRV	GATATC	1 cut(s)	959
EcoT14I	CCWWGG	2 cut(s)	703, 1006
EgeI	GGCGCC	1 cut(s)	157
EheI	GGCGCC	1 cut(s)	157
ErhI	CCWWGG	2 cut(s)	703, 1006
FaeI	CATG	7 cut(s)	147, 404, 594, 614, 1010, 1019, 1298
FaqI	GGGAC	4 cut(s)	129, 212, 555, 640
FatI	CATG	7 cut(s)	143, 400, 590, 610, 1006, 1015, 1294
FauI	CCCGC	1 cut(s)	106
Fnu4HI	GCNGC	9 cut(s)	25, 28, 175, 178, 639, 718, 783, 1125, 1196
FokI	GGATG	3 cut(s)	701, 1256, 1312
Fsp4HI	GCNGC	9 cut(s)	25, 28, 175, 178, 639, 718, 783, 1125, 1196
FspBI	CTAG	3 cut(s)	573, 621, 915
GlaI	GCGC	2 cut(s)	50, 157
GluI	GCNGC	9 cut(s)	25, 28, 175, 178, 639, 718, 783, 1125, 1196
GsuI	CTGGAG	1 cut(s)	243
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	6 cut(s)	150, 165, 215, 702, 720, 1005
HapII	CCGG	3 cut(s)	162, 193, 209
HgaI	GACGC	2 cut(s)	119, 637
HhaI	GCGC	2 cut(s)	51, 158
Hin1I	GRCGYC	2 cut(s)	156, 504
Hin1II	CATG	7 cut(s)	147, 404, 594, 614, 1010, 1019, 1298
Hin6I	GCGC	2 cut(s)	49, 156
HinP1I	GCGC	2 cut(s)	49, 156
HinfI	GANTC	5 cut(s)	430, 443, 650, 1172, 1322
HpaII	CCGG	3 cut(s)	162, 193, 209
HphI	GGTGA	5 cut(s)	235, 243, 481, 890, 1331
Hpy166II	GTNNAC	4 cut(s)	346, 536, 737, 1013
Hpy188III	TCNNGA	2 cut(s)	654, 677
Hpy8I	GTNNAC	4 cut(s)	346, 536, 737, 1013
Hpy99I	CGWCG	2 cut(s)	113, 506
HpyAV	CCTTC	6 cut(s)	250, 578, 677, 867, 977, 1063
HpyCH4III	ACNGT	3 cut(s)	287, 453, 1063
HpyCH4IV	ACGT	1 cut(s)	504
HpyCH4V	TGCA	5 cut(s)	475, 536, 971, 1280, 1289
HpyF10VI	GCNNNNNNNGC	6 cut(s)	46, 162, 171, 221, 1286, 1295
HpyF3I	CTNAG	3 cut(s)	740, 822, 1176
HpySE526I	ACGT	1 cut(s)	504
Hsp92I	GRCGYC	2 cut(s)	156, 504
Hsp92II	CATG	7 cut(s)	147, 404, 594, 614, 1010, 1019, 1298
HspAI	GCGC	2 cut(s)	49, 156
KasI	GGCGCC	1 cut(s)	155
KflI	GGGWCCC	1 cut(s)	116
LmnI	GCTCC	1 cut(s)	848
Lsp1109I	GCAGC	3 cut(s)	625, 769, 1182
LweI	GCATC	2 cut(s)	189, 1298
MaeI	CTAG	3 cut(s)	573, 621, 915
MaeII	ACGT	1 cut(s)	504
MbiI	CCGCTC	1 cut(s)	30
MboII	GAAGA	4 cut(s)	197, 324, 1026, 1110
MfeI	CAATTG	1 cut(s)	1275
MhlI	GDGCHC	1 cut(s)	538
MlsI	TGGCCA	1 cut(s)	215
MluCI	AATT	4 cut(s)	563, 841, 1229, 1275
MluNI	TGGCCA	1 cut(s)	215
Mly113I	GGCGCC	1 cut(s)	156
MlyI	GAGTC	1 cut(s)	452
MmeI	TCCRAC	1 cut(s)	157
Mox20I	TGGCCA	1 cut(s)	215
MroXI	GAANNNNTTC	1 cut(s)	567
MscI	TGGCCA	1 cut(s)	215
MseI	TTAA	1 cut(s)	974
MslI	CAYNNNNRTG	1 cut(s)	1330
Msp20I	TGGCCA	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	1124
MspI	CCGG	3 cut(s)	162, 193, 209
MspR9I	CCNGG	2 cut(s)	261, 1191
MunI	CAATTG	1 cut(s)	1275
Mva1269I	GAATGC	3 cut(s)	475, 744, 927
MvaI	CCWGG	2 cut(s)	261, 1191
MvnI	CGCG	3 cut(s)	49, 113, 717
MwoI	GCNNNNNNNGC	6 cut(s)	46, 162, 171, 221, 1286, 1295
NarI	GGCGCC	1 cut(s)	156
NcoI	CCATGG	1 cut(s)	1006
NlaIII	CATG	7 cut(s)	147, 404, 594, 614, 1010, 1019, 1298
NlaIV	GGNNCC	6 cut(s)	117, 118, 149, 157, 1004, 1258
NmeAIII	GCCGAG	3 cut(s)	150, 176, 477
NspI	RCATGY	1 cut(s)	614
PciI	ACATGT	1 cut(s)	610
PcsI	WCGNNNNNNNCGW	1 cut(s)	291
PctI	GAATGC	3 cut(s)	475, 744, 927
PdmI	GAANNNNTTC	1 cut(s)	567
PfeI	GAWTC	4 cut(s)	430, 650, 1172, 1322
PflFI	GACNNNGTC	1 cut(s)	1017
PkrI	GCNGC	9 cut(s)	26, 29, 176, 179, 640, 719, 784, 1126, 1197
PleI	GAGTC	1 cut(s)	451
PluTI	GGCGCC	1 cut(s)	159
PpsI	GAGTC	1 cut(s)	451
PpuMI	RGGWCCY	2 cut(s)	116, 1256
PscI	ACATGT	1 cut(s)	610
Psp5II	RGGWCCY	2 cut(s)	116, 1256
Psp6I	CCWGG	2 cut(s)	259, 1189
PspGI	CCWGG	2 cut(s)	259, 1189
PspN4I	GGNNCC	6 cut(s)	117, 118, 149, 157, 1004, 1258
PspPI	GGNCC	7 cut(s)	116, 148, 700, 707, 719, 1003, 1256
PspPPI	RGGWCCY	2 cut(s)	116, 1256
PsyI	GACNNNGTC	1 cut(s)	1017
RsaI	GTAC	3 cut(s)	816, 912, 993
RsaNI	GTAC	3 cut(s)	815, 911, 992
RseI	CAYNNNNRTG	1 cut(s)	1330
SaqAI	TTAA	1 cut(s)	974
SatI	GCNGC	9 cut(s)	25, 28, 175, 178, 639, 718, 783, 1125, 1196
Sau96I	GGNCC	7 cut(s)	116, 148, 700, 707, 719, 1003, 1256
ScaI	AGTACT	1 cut(s)	993
SchI	GAGTC	1 cut(s)	452
ScrFI	CCNGG	2 cut(s)	261, 1191
SduI	GDGCHC	1 cut(s)	538
SfaNI	GCATC	2 cut(s)	189, 1298
SfcI	CTRYAG	1 cut(s)	1059
SfoI	GGCGCC	1 cut(s)	157
SinI	GGWCC	3 cut(s)	116, 707, 1256
SmiMI	CAYNNNNRTG	1 cut(s)	1330
SpeI	ACTAGT	1 cut(s)	620
Sse9I	AATT	4 cut(s)	563, 841, 1229, 1275
SspDI	GGCGCC	1 cut(s)	155
SspMI	CTAG	3 cut(s)	573, 621, 915
StyD4I	CCNGG	2 cut(s)	259, 1189
StyI	CCWWGG	2 cut(s)	703, 1006
TaaI	ACNGT	3 cut(s)	287, 453, 1063
TaiI	ACGT	1 cut(s)	507
TaqI	TCGA	3 cut(s)	183, 446, 676
TasI	AATT	4 cut(s)	563, 841, 1229, 1275
TatI	WGTACW	1 cut(s)	991
TauI	GCSGC	6 cut(s)	27, 30, 177, 180, 720, 1127
TfiI	GAWTC	4 cut(s)	430, 650, 1172, 1322
Tru1I	TTAA	1 cut(s)	974
Tru9I	TTAA	1 cut(s)	974
TscAI	CASTG	1 cut(s)	543
TseI	GCWGC	3 cut(s)	638, 782, 1195
TspDTI	ATGAA	5 cut(s)	417, 579, 696, 996, 1104
TspRI	CASTG	1 cut(s)	543
Tth111I	GACNNNGTC	1 cut(s)	1017
VneI	GTGCAC	1 cut(s)	534
VpaK11BI	GGWCC	3 cut(s)	116, 707, 1256
XagI	CCTNNNNNAGG	1 cut(s)	258
XapI	RAATTY	1 cut(s)	1229
XceI	RCATGY	1 cut(s)	614
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1013
XmnI	GAANNNNTTC	1 cut(s)	567
XspI	CTAG	3 cut(s)	573, 621, 915
ZraI	GACGTC	1 cut(s)	505
ZrmI	AGTACT	1 cut(s)	993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.