Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0001529

Physical Location & Seq

Genomic Coordinates Forward (+)

19929679 .. 19943141

Gene Structure 13463 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00300000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGTCGGAAGGCGACATGGCGGTTATTAAACCTAAGACTACTGATGGTTCAATCCAACAAGTGGAGCAAGAGGTTGCCATGTTTTGCCCGTTGATATGTCGAGAAGTTATACAAAAAGGGATGGGATCTTCCAAGACCCATGCGATATCTCTTCCAGAAAGAGTCAATACTGCCATGTTGAGCCTAATTCTTGATTACTGCAGGTTTCATCAAGTACTGGGTCGCTCTAATAAGGAATGCAAGTCGTTTGATGAAAAATTTATTCGAATGGACACACAGAGGCTCTGTGAGTTGACATCAGCTGCTGATAGTCTCCAGTTAAAGCCATTGGTTGATCTGACCAGTCGTGCTCTTGCGCGAATAATTGAAGGGAAAACGCCTGAGGAGATACGTGAGATATTTCACCTTCCCGATGATCTTACAGAGGAAGAGAAGTTGGAGCCATTGAAAAATGTGACTGATGATCCACGGATACGGCTTTTGAATCGACTGTATGCGAGAAAGAGGAAAGAACTTAAGGAAAGAGAGAAATTGAAGAATACTGAGAATGGAGAGCAAAATGATGACCGTTCAGTAGACGATCTCTTGTCATTCATTAACGGAGAAATTGGAGATTCCAAAGAGATCAAATCATCCAAGAATAAAAAGAAGAATCGTAGAAGAAAAGATCAACAGAAAAATACTTGTCTATATGAGGCCAATGGCAGCCATGAGGAGCCGAAAAGTTTAAAGTTTGTTTGCCCCAGTGACGAAGTCAACAATTTTAGGCCCAGTCCCAGTTTGACATTAACGTTACAAGATCTGGAACATGACAGTCTGAATGATCAGCTTGAGTTTGTTGATGGTGATATCGATGATGAAATTGATCCAGCTTTAAAAGCACAAATTGATAGGGAGGTTGAAGATTTTGCTCGGAGGTTGAATTCTGACTGGCCTCAAAGGATGCAAGAAATTCTATCTTTGGGTCAAGAAAGGAGGCGGGGGCAATTTTCCATTAACGGAAATGATTCTTTAAGAAGATATGCTTATAGTCTTATAAGTGATAGAAAAAAGAGAGAAAGACGTGTATGGACAGATGAGCAAGAAGATACTCTTCTAAACATCCTAGAAGAACTAGTTGCAAATGGTCATGCTCGTAAAAATGGCACATTCAAACCTGGTACATCAATTATGATTGAGAATGCTTTACCGGATAAATTTCCCAATTCCGGACTAAAGTATAGTCCACATGTTGAGTCAAAGATTAAGGACTTTAAGAAAAAATATGCTGTGGTATATGACATGCTCCAAAAAAGTGGATTTGGATGGAATGATGTGAGGAAGTGCGTTGAGGTTGACAATGATGAGGCATGGTATGCATATGTCAAGGTAAATTTTACTAACTTGATGAAAAGTGAAATTATCGTTTTTGTTTTCAGCATCACAAGGATGCCGATGGATGGAGGGGCAAACCATTCCCACGTTATGAAACATTTGCTCATATATTTGGAGTGGACCGTGCTATTGGAAAGGCTGCCAAAGTACCTCGCTGCAATAGTAGAGGAAGTTAATGAAAAGCTTGAAAACCAAGAGCATGTTGATGCATTTGATTATAAGGTAGAAGCGGACCAACTATCCACCGCTAAATCCGAGTCCACTTCTAAATCCGAGTCTACAAGCACTAGTAGGAGGAGGAAAAGAGAGGATGATGATAACATAGTTCGTGGCTTAGACAAGTTTGCTGCAACATTCAAAGAAGTGATGCAGACTTCAAATGAGCAGATCCGCCTTCTTGTTGAATACTTGCAGCCAAAAGGTAGCAAAAAAGATGAGTATGGTATGGGAAGTGAGGTATCTACATACGGGGATATCTACAGCTTTGGCATTCTCTTGTTAGAAATGTTTACTGGGAAGCGACCCACTGATCACATGTTCAGTGACAACTTGAATCTTCATAATTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0019005 GO:0031461 GO:0032991 GO:0044424 GO:0044464 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04114 ko04120 ko04141 ko04310 ko04341 ko04350 ko04710 ko05168 ko05200 map04110 map04111 map04114 map04120 map04141 map04310 map04341 map04350 map04710 map05168 map05200

Pfam Domains

Protein Families

Skp1 Skp1_POZ

Protein Analysis

647

Amino Acids

74.72

Weight (kDa)

5.69

Isoelectric Point (pI)

42.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Skp1	PF01466	108 - 145	2.5e-12	Skp1 family, dimerisation domain
Myb_DNA-bind_3	PF12776	357 - 454	4.8e-11	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001529)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45950 AT2G45950 AT2G45950 AT2G45950 AT2G45950 AT3G61415 AT3G61415
fragaria_vesca	FvH4_7g14420 FvH4_7g14420 FvH4_7g14420 FvH4_7g14420 FvH4_7g14420 FvH4_7g14420 FvH4_7g29890 FvH4_7g29890 FvH4_7g29890 FvH4_7g29890
malus_domestica	MD01G1062100.v1.1 MD01G1062700.v1.1 MD01G1205300.v1.1 MD07G1273900.v1.1 MD07G1274100.v1.1
prunus_persica	Prupe.2G171100_v2.0.a1 Prupe.2G171100_v2.0.a1 Prupe.2G171100_v2.0.a1 Prupe.2G171100_v2.0.a1 Prupe.2G297900_v2.0.a1 Prupe.2G297900_v2.0.a1 Prupe.2G297900_v2.0.a1
pyrus_communis	pycom01g09320 pycom01g21480
rosa_chinensis	RchiOBHm_Chr1g0355761 RchiOBHm_Chr1g0377851
rosa_laevigata	RLG00000026492 RLG00000028129
rosa_multiflora	Rmu_sc0004824.1_g000008
rosa_roxburghii	Rroxscaffold_4G00281000 Rroxscaffold_4G00300000
rosa_rugosa	Rorug01G0248000 Rorug01G0405300 Rorug01G0405300
rosa_samantha	Rh1AG261000 Rh1AG426700 Rh1BG229400 Rh1BG382600 Rh1CG243600 Rh1CG396500 Rh1DG257400 Rh1DG413600
rosa_wichuraiana	Rw1G023000 Rw1G037180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1037, 1593
Acc36I	ACCTGC	1 cut(s)	192
AccB7I	CCANNNNNTGG	1 cut(s)	61
AccI	GTMKAC	2 cut(s)	576, 1652
AccII	CGCG	1 cut(s)	358
AccIII	TCCGGA	1 cut(s)	1208
AciI	CCGC	5 cut(s)	20, 979, 1604, 1620, 1765
AclI	AACGTT	1 cut(s)	791
AclWI	GGATC	4 cut(s)	133, 458, 860, 1756
AcsI	RAATTY	5 cut(s)	257, 922, 951, 1196, 1372
AfaI	GTAC	3 cut(s)	216, 1162, 1523
AfiI	CCNNNNNNNGG	3 cut(s)	61, 1208, 1439
AflII	CTTAAG	1 cut(s)	515
AflIII	ACRYGT	3 cut(s)	1063, 1228, 1908
AhlI	ACTAGT	2 cut(s)	1114, 1661
AjiI	CACGTC	1 cut(s)	1064
AjnI	CCWGG	1 cut(s)	1156
AluBI	AGCT	5 cut(s)	302, 829, 872, 1558, 1857
AluI	AGCT	5 cut(s)	302, 829, 872, 1558, 1857
Alw21I	GWGCWC	1 cut(s)	352
Alw26I	GTCTC	1 cut(s)	317
AlwI	GGATC	4 cut(s)	133, 458, 860, 1756
AlwNI	CAGNNNCTG	1 cut(s)	305
Aor13HI	TCCGGA	1 cut(s)	1208
AoxI	GGCC	3 cut(s)	696, 767, 932
ApeKI	GCWGC	6 cut(s)	302, 705, 1513, 1529, 1721, 1786
ApoI	RAATTY	5 cut(s)	257, 922, 951, 1196, 1372
Asp700I	GAANNNNTTC	1 cut(s)	1006
AspLEI	GCGC	1 cut(s)	358
AspS9I	GGNCC	3 cut(s)	768, 1494, 1606
AsuHPI	GGTGA	2 cut(s)	395, 857
AsuII	TTCGAA	1 cut(s)	265
AvaII	GGWCC	2 cut(s)	1494, 1606
AxyI	CCTNAGG	1 cut(s)	381
Bbv12I	GWGCWC	1 cut(s)	352
BbvI	GCAGC	6 cut(s)	289, 717, 1500, 1516, 1708, 1798
BccI	CCATC	6 cut(s)	38, 115, 836, 1299, 1429, 1433
BceAI	ACGGC	1 cut(s)	491
BciT130I	CCWGG	1 cut(s)	1158
BciVI	GTATCC	1 cut(s)	465
BclI	TGATCA	2 cut(s)	823, 1903
BcoDI	GTCTC	1 cut(s)	317
BcuI	ACTAGT	2 cut(s)	1114, 1661
BfaI	CTAG	4 cut(s)	1106, 1115, 1662, 1942
BfmI	CTRYAG	2 cut(s)	199, 1852
BfrI	CTTAAG	1 cut(s)	515
BfuAI	ACCTGC	1 cut(s)	192
BfuI	GTATCC	1 cut(s)	465
BglII	AGATCT	1 cut(s)	799
BisI	GCNGC	6 cut(s)	303, 706, 1514, 1530, 1722, 1787
BlsI	GCNGC	6 cut(s)	304, 707, 1515, 1531, 1723, 1788
BmcAI	AGTACT	1 cut(s)	216
Bme1390I	CCNGG	1 cut(s)	1158
Bme18I	GGWCC	2 cut(s)	1494, 1606
BmgBI	CACGTC	1 cut(s)	1064
BmgT120I	GGNCC	3 cut(s)	768, 1494, 1606
BmiI	GGNNCC	2 cut(s)	441, 717
BmrFI	CCNGG	1 cut(s)	1158
BmrI	ACTGGG	5 cut(s)	227, 738, 765, 771, 1896
BmsI	GCATC	5 cut(s)	933, 1419, 1428, 1570, 1731
BmuI	ACTGGG	5 cut(s)	227, 738, 765, 771, 1896
BpmI	CTGGAG	1 cut(s)	299
Bpu14I	TTCGAA	1 cut(s)	265
BpuEI	CTTGAG	1 cut(s)	851
Bsa29I	ATCGAT	1 cut(s)	852
BsaAI	YACGTR	1 cut(s)	392
BsaJI	CCNNGG	1 cut(s)	467
BsaWI	WCCGGW	2 cut(s)	1189, 1208
Bsc4I	CCNNNNNNNGG	3 cut(s)	61, 1208, 1439
Bse1I	ACTGG	8 cut(s)	222, 316, 342, 744, 771, 777, 935, 1891
Bse21I	CCTNAGG	1 cut(s)	381
BseAI	TCCGGA	1 cut(s)	1208
BseBI	CCWGG	1 cut(s)	1158
BseCI	ATCGAT	1 cut(s)	852
BseDI	CCNNGG	1 cut(s)	467
BseGI	GGATG	8 cut(s)	126, 632, 948, 1101, 1310, 1434, 1444, 1690
BseLI	CCNNNNNNNGG	3 cut(s)	61, 1208, 1439
BseMII	CTCAG	2 cut(s)	372, 534
BseNI	ACTGG	8 cut(s)	222, 316, 342, 744, 771, 777, 935, 1891
BseRI	GAGGAG	3 cut(s)	398, 728, 1684
BseXI	GCAGC	6 cut(s)	289, 717, 1500, 1516, 1708, 1798
Bsh1236I	CGCG	1 cut(s)	358
BshFI	GGCC	3 cut(s)	698, 769, 934
BshVI	ATCGAT	1 cut(s)	852
BsiHKAI	GWGCWC	1 cut(s)	352
BsiSI	CCGG	2 cut(s)	1190, 1209
BslFI	GGGAC	1 cut(s)	759
BslI	CCNNNNNNNGG	3 cut(s)	61, 1208, 1439
BsmAI	GTCTC	1 cut(s)	317
BsmFI	GGGAC	1 cut(s)	759
BsmI	GAATGC	3 cut(s)	242, 1186, 1863
BsnI	GGCC	3 cut(s)	698, 769, 934
Bsp119I	TTCGAA	1 cut(s)	265
Bsp1286I	GDGCHC	1 cut(s)	352
Bsp13I	TCCGGA	1 cut(s)	1208
BspACI	CCGC	5 cut(s)	20, 979, 1604, 1620, 1765
BspANI	GGCC	3 cut(s)	698, 769, 934
BspCNI	CTCAG	2 cut(s)	373, 535
BspDI	ATCGAT	1 cut(s)	852
BspEI	TCCGGA	1 cut(s)	1208
BspFNI	CGCG	1 cut(s)	358
BspLI	GGNNCC	2 cut(s)	441, 717
BspMAI	CTGCAG	1 cut(s)	203
BspMI	ACCTGC	1 cut(s)	192
BspPI	GGATC	4 cut(s)	133, 458, 860, 1756
BspT104I	TTCGAA	1 cut(s)	265
BspTI	CTTAAG	1 cut(s)	515
BsrI	ACTGG	8 cut(s)	222, 316, 342, 744, 771, 777, 935, 1891
BssECI	CCNNGG	1 cut(s)	467
Bst2UI	CCWGG	1 cut(s)	1158
Bst4CI	ACNGT	4 cut(s)	492, 569, 815, 1498
Bst6I	CTCTTC	3 cut(s)	156, 423, 1098
BstAFI	CTTAAG	1 cut(s)	515
BstAPI	GCANNNNNTGC	1 cut(s)	1355
BstBAI	YACGTR	1 cut(s)	392
BstBI	TTCGAA	1 cut(s)	265
BstDEI	CTNAG	4 cut(s)	33, 381, 543, 1708
BstDSI	CCRYGG	1 cut(s)	467
BstF5I	GGATG	8 cut(s)	126, 632, 948, 1101, 1310, 1434, 1444, 1690
BstFNI	CGCG	1 cut(s)	358
BstHHI	GCGC	1 cut(s)	358
BstMAI	GTCTC	1 cut(s)	317
BstMWI	GCNNNNNNNGC	2 cut(s)	878, 1355
BstNI	CCWGG	1 cut(s)	1158
BstNSI	RCATGY	4 cut(s)	1232, 1285, 1577, 1912
BstSCI	CCNGG	1 cut(s)	1156
BstSFI	CTRYAG	2 cut(s)	199, 1852
BstUI	CGCG	1 cut(s)	358
BstV1I	GCAGC	6 cut(s)	289, 717, 1500, 1516, 1708, 1798
BstX2I	RGATCY	3 cut(s)	125, 799, 1761
BstXI	CCANNNNNNTGG	1 cut(s)	1295
BstYI	RGATCY	3 cut(s)	125, 799, 1761
Bsu15I	ATCGAT	1 cut(s)	852
Bsu36I	CCTNAGG	1 cut(s)	381
BsuI	GTATCC	1 cut(s)	465
BsuRI	GGCC	3 cut(s)	698, 769, 934
BsuTUI	ATCGAT	1 cut(s)	852
BtgI	CCRYGG	1 cut(s)	467
BtrI	CACGTC	1 cut(s)	1064
BtsCI	GGATG	8 cut(s)	126, 632, 948, 1101, 1310, 1434, 1444, 1690
BtsIMutI	CAGTG	3 cut(s)	751, 1899, 1921
BveI	ACCTGC	1 cut(s)	192
CaiI	CAGNNNCTG	1 cut(s)	305
CfoI	GCGC	1 cut(s)	358
Cfr13I	GGNCC	3 cut(s)	768, 1494, 1606
ClaI	ATCGAT	1 cut(s)	852
CsiI	ACCWGGT	1 cut(s)	1156
Csp6I	GTAC	3 cut(s)	215, 1161, 1522
CviQI	GTAC	3 cut(s)	215, 1161, 1522
DdeI	CTNAG	4 cut(s)	33, 381, 543, 1708
DraI	TTTAAA	2 cut(s)	729, 876
Eam1104I	CTCTTC	3 cut(s)	156, 423, 1098
EarI	CTCTTC	3 cut(s)	156, 423, 1098
EciI	GGCGGA	1 cut(s)	1754
Eco32I	GATATC	3 cut(s)	147, 850, 1849
Eco47I	GGWCC	2 cut(s)	1494, 1606
Eco81I	CCTNAGG	1 cut(s)	381
EcoRI	GAATTC	1 cut(s)	922
EcoRII	CCWGG	1 cut(s)	1156
EcoRV	GATATC	3 cut(s)	147, 850, 1849
EcoT22I	ATGCAT	2 cut(s)	1360, 1585
FalI	AAGNNNNNCTT	4 cut(s)	1009, 1041, 1077, 1109
FaqI	GGGAC	1 cut(s)	759
FauI	CCCGC	1 cut(s)	972
FauNDI	CATATG	1 cut(s)	1360
FbaI	TGATCA	2 cut(s)	823, 1903
FblI	GTMKAC	2 cut(s)	576, 1652
Fnu4HI	GCNGC	6 cut(s)	303, 706, 1514, 1530, 1722, 1787
FokI	GGATG	8 cut(s)	133, 619, 955, 1088, 1317, 1441, 1451, 1697
Fsp4HI	GCNGC	6 cut(s)	303, 706, 1514, 1530, 1722, 1787
FspBI	CTAG	4 cut(s)	1106, 1115, 1662, 1942
GlaI	GCGC	1 cut(s)	357
GluI	GCNGC	6 cut(s)	303, 706, 1514, 1530, 1722, 1787
GsuI	CTGGAG	1 cut(s)	299
HaeIII	GGCC	3 cut(s)	698, 769, 934
HapII	CCGG	2 cut(s)	1190, 1209
HhaI	GCGC	1 cut(s)	358
Hin6I	GCGC	1 cut(s)	356
HinP1I	GCGC	1 cut(s)	356
HincII	GTYRAC	3 cut(s)	294, 757, 1336
HindII	GTYRAC	3 cut(s)	294, 757, 1336
HindIII	AAGCTT	1 cut(s)	1556
HinfI	GANTC	9 cut(s)	162, 484, 614, 652, 1007, 1235, 1631, 1649, 1927
HpaII	CCGG	2 cut(s)	1190, 1209
HphI	GGTGA	2 cut(s)	395, 857
Hpy166II	GTNNAC	9 cut(s)	294, 577, 757, 1226, 1336, 1494, 1635, 1653, 1884
Hpy188I	TCNGA	7 cut(s)	7, 339, 819, 915, 928, 1630, 1648
Hpy188III	TCNNGA	7 cut(s)	101, 155, 191, 410, 803, 968, 1209
Hpy8I	GTNNAC	9 cut(s)	294, 577, 757, 1226, 1336, 1494, 1635, 1653, 1884
HpyAV	CCTTC	3 cut(s)	362, 416, 1778
HpyCH4III	ACNGT	4 cut(s)	492, 569, 815, 1498
HpyCH4IV	ACGT	4 cut(s)	391, 791, 1063, 1461
HpyF10VI	GCNNNNNNNGC	2 cut(s)	878, 1355
HpyF3I	CTNAG	4 cut(s)	33, 381, 543, 1708
HpySE526I	ACGT	4 cut(s)	391, 791, 1063, 1461
HspAI	GCGC	1 cut(s)	356
Kpn2I	TCCGGA	1 cut(s)	1208
Ksp22I	TGATCA	2 cut(s)	823, 1903
LmnI	GCTCC	4 cut(s)	64, 439, 715, 1290
Lsp1109I	GCAGC	6 cut(s)	289, 717, 1500, 1516, 1708, 1798
LweI	GCATC	5 cut(s)	933, 1419, 1428, 1570, 1731
MabI	ACCWGGT	1 cut(s)	1156
MaeI	CTAG	4 cut(s)	1106, 1115, 1662, 1942
MaeII	ACGT	4 cut(s)	391, 791, 1063, 1461
MaeIII	GTNAC	4 cut(s)	454, 746, 792, 1916
MflI	RGATCY	3 cut(s)	125, 799, 1761
MhlI	GDGCHC	1 cut(s)	352
MlyI	GAGTC	4 cut(s)	171, 1244, 1640, 1658
MmeI	TCCRAC	2 cut(s)	79, 417
Mph1103I	ATGCAT	2 cut(s)	1360, 1585
MroI	TCCGGA	1 cut(s)	1208
MroXI	GAANNNNTTC	1 cut(s)	1006
MslI	CAYNNNNRTG	2 cut(s)	1427, 1578
MspA1I	CMGCKG	1 cut(s)	302
MspCI	CTTAAG	1 cut(s)	515
MspI	CCGG	2 cut(s)	1190, 1209
MspR9I	CCNGG	1 cut(s)	1158
Mva1269I	GAATGC	3 cut(s)	242, 1186, 1863
MvaI	CCWGG	1 cut(s)	1158
MvnI	CGCG	1 cut(s)	358
MwoI	GCNNNNNNNGC	2 cut(s)	878, 1355
NdeI	CATATG	1 cut(s)	1360
NlaIV	GGNNCC	2 cut(s)	441, 717
NmuCI	GTSAC	3 cut(s)	454, 746, 1916
NsiI	ATGCAT	2 cut(s)	1360, 1585
NspI	RCATGY	4 cut(s)	1232, 1285, 1577, 1912
NspV	TTCGAA	1 cut(s)	265
PciI	ACATGT	2 cut(s)	1228, 1908
PctI	GAATGC	3 cut(s)	242, 1186, 1863
PdmI	GAANNNNTTC	1 cut(s)	1006
PfeI	GAWTC	5 cut(s)	484, 614, 652, 1007, 1927
PflFI	GACNNNGTC	1 cut(s)	752
PflMI	CCANNNNNTGG	1 cut(s)	61
PkrI	GCNGC	6 cut(s)	304, 707, 1515, 1531, 1723, 1788
PleI	GAGTC	4 cut(s)	170, 1243, 1639, 1657
PpsI	GAGTC	4 cut(s)	170, 1243, 1639, 1657
Ppu21I	YACGTR	1 cut(s)	392
PscI	ACATGT	2 cut(s)	1228, 1908
PsiI	TTATAA	2 cut(s)	1037, 1593
Psp1406I	AACGTT	1 cut(s)	791
Psp6I	CCWGG	1 cut(s)	1156
PspGI	CCWGG	1 cut(s)	1156
PspN4I	GGNNCC	2 cut(s)	441, 717
PspPI	GGNCC	3 cut(s)	768, 1494, 1606
PstI	CTGCAG	1 cut(s)	203
PstNI	CAGNNNCTG	1 cut(s)	305
PsuI	RGATCY	3 cut(s)	125, 799, 1761
PsyI	GACNNNGTC	1 cut(s)	752
PvuII	CAGCTG	1 cut(s)	302
RsaI	GTAC	3 cut(s)	216, 1162, 1523
RsaNI	GTAC	3 cut(s)	215, 1161, 1522
RseI	CAYNNNNRTG	2 cut(s)	1427, 1578
SatI	GCNGC	6 cut(s)	303, 706, 1514, 1530, 1722, 1787
Sau96I	GGNCC	3 cut(s)	768, 1494, 1606
ScaI	AGTACT	1 cut(s)	216
SchI	GAGTC	4 cut(s)	171, 1244, 1640, 1658
ScrFI	CCNGG	1 cut(s)	1158
SduI	GDGCHC	1 cut(s)	352
SexAI	ACCWGGT	1 cut(s)	1156
SfaNI	GCATC	5 cut(s)	933, 1419, 1428, 1570, 1731
SfcI	CTRYAG	2 cut(s)	199, 1852
SfuI	TTCGAA	1 cut(s)	265
SinI	GGWCC	2 cut(s)	1494, 1606
SmiMI	CAYNNNNRTG	2 cut(s)	1427, 1578
SmlI	CTYRAG	2 cut(s)	515, 830
SmoI	CTYRAG	2 cut(s)	515, 830
SpeI	ACTAGT	2 cut(s)	1114, 1661
SsiI	CCGC	5 cut(s)	20, 979, 1604, 1620, 1765
SspMI	CTAG	4 cut(s)	1106, 1115, 1662, 1942
StyD4I	CCNGG	1 cut(s)	1156
TaaI	ACNGT	4 cut(s)	492, 569, 815, 1498
TaiI	ACGT	4 cut(s)	394, 794, 1066, 1464
TaqI	TCGA	4 cut(s)	100, 265, 487, 852
TatI	WGTACW	1 cut(s)	214
TfiI	GAWTC	5 cut(s)	484, 614, 652, 1007, 1927
TscAI	CASTG	3 cut(s)	751, 1906, 1921
TseFI	GTSAC	3 cut(s)	454, 746, 1916
TseI	GCWGC	6 cut(s)	302, 705, 1513, 1529, 1721, 1786
Tsp45I	GTSAC	3 cut(s)	454, 746, 1916
TspDTI	ATGAA	8 cut(s)	197, 267, 583, 873, 1403, 1481, 1566, 1922
TspGWI	ACGGA	3 cut(s)	484, 615, 1014
TspRI	CASTG	3 cut(s)	751, 1906, 1921
Tth111I	GACNNNGTC	1 cut(s)	752
Van91I	CCANNNNNTGG	1 cut(s)	61
Vha464I	CTTAAG	1 cut(s)	515
VpaK11BI	GGWCC	2 cut(s)	1494, 1606
XapI	RAATTY	5 cut(s)	257, 922, 951, 1196, 1372
XceI	RCATGY	4 cut(s)	1232, 1285, 1577, 1912
XmiI	GTMKAC	2 cut(s)	576, 1652
XmnI	GAANNNNTTC	1 cut(s)	1006
XspI	CTAG	4 cut(s)	1106, 1115, 1662, 1942
ZrmI	AGTACT	1 cut(s)	216
Zsp2I	ATGCAT	2 cut(s)	1360, 1585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.